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Center for Computational Systems Medicine
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FusionGeneSummary

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FusionProtFeature

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FusionGeneSequence

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FusionGenePPI

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RelatedDiseases

Fusion gene ID: 34307

FusionGeneSummary for SLC2A1_ELOVL1

check button Fusion gene summary
Fusion gene informationFusion gene name: SLC2A1_ELOVL1
Fusion gene ID: 34307
HgeneTgene
Gene symbol

SLC2A1

ELOVL1

Gene ID

6513

64834

Gene namesolute carrier family 2 member 1ELOVL fatty acid elongase 1
SynonymsCSE|DYT17|DYT18|DYT9|EIG12|GLUT|GLUT-1|GLUT1|GLUT1DS|HTLVR|PED|SDCHCNCGI-88|Ssc1
Cytomap

1p34.2

1p34.2

Type of geneprotein-codingprotein-coding
Descriptionsolute carrier family 2, facilitated glucose transporter member 1choreoathetosis/spasticity, episodic (paroxysmal choreoathetosis/spasticity)glucose transporter type 1, erythrocyte/brainhepG2 glucose transporterhuman T-cell leukemia virus (I and II) relongation of very long chain fatty acids protein 13-keto acyl-CoA synthase ELOVL1ELOVL FA elongase 1elongation of very long chain fatty acids (FEN1/Elo2, SUR4/Elo3, yeast)-like 1very long chain 3-ketoacyl-CoA synthase 1very long chain 3-oxoacyl-CoA
Modification date2018052720180523
UniProtAcc

P11166

Q9BW60

Ensembl transtripts involved in fusion geneENST00000426263, ENST00000475162, 
ENST00000415851, ENST00000372500, 
ENST00000372458, ENST00000413844, 
ENST00000470769, 
Fusion gene scores* DoF score4 X 2 X 4=323 X 3 X 3=27
# samples 43
** MAII scorelog2(4/32*10)=0.321928094887362
effective Gene in Pan-Cancer Fusion Genes (eGinPCFGs).
DoF>8 and MAII>0
log2(3/27*10)=0.15200309344505
effective Gene in Pan-Cancer Fusion Genes (eGinPCFGs).
DoF>8 and MAII>0
Context

PubMed: SLC2A1 [Title/Abstract] AND ELOVL1 [Title/Abstract] AND fusion [Title/Abstract]

Functional or gene categories assigned by FusionGDB annotation
* DoF score (Degree of Frequency) = # partners X # break points X # cancer types
** MAII score (Major Active Isofusion Index) = log2(# samples/DoF score*10)

check button Gene ontology of each fusion partner gene with evidence of Inferred from Direct Assay (IDA) from Entrez
PartnerGeneGO IDGO termPubMed ID
HgeneSLC2A1

GO:0065003

protein-containing complex assembly

18347014

HgeneSLC2A1

GO:1904659

glucose transmembrane transport

18245775

TgeneELOVL1

GO:0019367

fatty acid elongation, saturated fatty acid

20166112|20937905

TgeneELOVL1

GO:0034625

fatty acid elongation, monounsaturated fatty acid

20166112

TgeneELOVL1

GO:0042761

very long-chain fatty acid biosynthetic process

20166112|20937905


check button Fusion gene information from three resources
(ChiTars (NAR, 2018), tumorfusions (NAR, 2018), Gao et al. (Cell, 2018))
* All genome coordinats were lifted-over on hg19.
* Click on the break point to see the gene structure around the break point region using the UCSC Genome Browser.
Data typeSourceCancer typeSampleHgeneHchrHbpHstrandTgeneTchrTbpTstrand
TCGALDLUADTCGA-64-1679-01ASLC2A1chr1

43424305

-ELOVL1chr1

43830465

-
* LD: Li Ding group's fusion gene list
  RV: Roel Verhaak group's fusion gene list
  ChiTaRs fusion database

check button Open reading frame (ORF) analsis of fusion genes based on Ensembl gene isoform structure.
* Click on the break point to see the gene structure around the break point region using the UCSC Genome Browser.
ORFHenstTenstHgeneHchrHbpHstrandTgeneTchrTbpTstrand
In-frameENST00000426263ENST00000372458SLC2A1chr1

43424305

-ELOVL1chr1

43830465

-
In-frameENST00000426263ENST00000413844SLC2A1chr1

43424305

-ELOVL1chr1

43830465

-
5CDS-5UTRENST00000426263ENST00000470769SLC2A1chr1

43424305

-ELOVL1chr1

43830465

-
intron-3CDSENST00000475162ENST00000372458SLC2A1chr1

43424305

-ELOVL1chr1

43830465

-
intron-3CDSENST00000475162ENST00000413844SLC2A1chr1

43424305

-ELOVL1chr1

43830465

-
intron-5UTRENST00000475162ENST00000470769SLC2A1chr1

43424305

-ELOVL1chr1

43830465

-
In-frameENST00000415851ENST00000372458SLC2A1chr1

43424305

-ELOVL1chr1

43830465

-
In-frameENST00000415851ENST00000413844SLC2A1chr1

43424305

-ELOVL1chr1

43830465

-
5CDS-5UTRENST00000415851ENST00000470769SLC2A1chr1

43424305

-ELOVL1chr1

43830465

-
In-frameENST00000372500ENST00000372458SLC2A1chr1

43424305

-ELOVL1chr1

43830465

-
In-frameENST00000372500ENST00000413844SLC2A1chr1

43424305

-ELOVL1chr1

43830465

-
5CDS-5UTRENST00000372500ENST00000470769SLC2A1chr1

43424305

-ELOVL1chr1

43830465

-

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FusionProtFeatures for SLC2A1_ELOVL1


check buttonMain function of each fusion partner protein. (from UniProt)
HgeneTgene
SLC2A1

P11166

ELOVL1

Q9BW60

Facilitative glucose transporter. This isoform may beresponsible for constitutive or basal glucose uptake. Has a verybroad substrate specificity; can transport a wide range of aldosesincluding both pentoses and hexoses. {ECO:0000269|PubMed:18245775,ECO:0000269|PubMed:19449892}. Catalyzes the first and rate-limiting reaction of thefour that constitute the long-chain fatty acids elongation cycle.This endoplasmic reticulum-bound enzymatic process, allows theaddition of 2 carbons to the chain of long- and very long-chainfatty acids/VLCFAs per cycle. Condensing enzyme that exhibitsactivity toward saturated C18 to C26 acyl-CoA substrates, with thehighest activity towards C22:0 acyl-CoA. May participate in theproduction of both saturated and monounsaturated VLCFAs ofdifferent chain lengths that are involved in multiple biologicalprocesses as precursors of membrane lipids and lipid mediators.Important for saturated C24:0 and monounsaturated C24:1sphingolipid synthesis. Indirectly inhibits RPE65 via productionof VLCFAs. {ECO:0000255|HAMAP-Rule:MF_03201,ECO:0000269|PubMed:20166112, ECO:0000269|PubMed:20937905}.

check buttonRetention analysis result of each fusion partner protein across 39 protein features of UniProt such as six molecule processing features, 13 region features, four site features, six amino acid modification features, two natural variation features, five experimental info features, and 3 secondary structure features. Here, because of limited space for viewing, we only show the protein feature retention information belong to the 13 regional features. All retention annotation result can be downloaded at

download page

.

* Minus value of BPloci means that the break pointn is located before the CDS.
- In-frame and retained protein feature among the 13 regional features.
>>>>>>>>>>>>
PartnerGeneHbpTbpENSTStrandBPexonTotalExonProtein feature loci*BPlociTotalLenProtein featureProtein feature note
TgeneELOVL1chr1:43424305chr1:43830465ENST00000372458-38275_279106280MotifDi-lysine motif
TgeneELOVL1chr1:43424305chr1:43830465ENST00000413844-27275_27979253MotifDi-lysine motif
TgeneELOVL1chr1:43424305chr1:43830465ENST00000372458-38110_130106280TransmembraneHelical
TgeneELOVL1chr1:43424305chr1:43830465ENST00000372458-38137_154106280TransmembraneHelical
TgeneELOVL1chr1:43424305chr1:43830465ENST00000372458-38176_196106280TransmembraneHelical
TgeneELOVL1chr1:43424305chr1:43830465ENST00000372458-38201_221106280TransmembraneHelical
TgeneELOVL1chr1:43424305chr1:43830465ENST00000372458-38231_251106280TransmembraneHelical
TgeneELOVL1chr1:43424305chr1:43830465ENST00000413844-27110_13079253TransmembraneHelical
TgeneELOVL1chr1:43424305chr1:43830465ENST00000413844-27137_15479253TransmembraneHelical
TgeneELOVL1chr1:43424305chr1:43830465ENST00000413844-27176_19679253TransmembraneHelical
TgeneELOVL1chr1:43424305chr1:43830465ENST00000413844-27201_22179253TransmembraneHelical
TgeneELOVL1chr1:43424305chr1:43830465ENST00000413844-27231_25179253TransmembraneHelical

- In-frame and not-retained protein feature among the 13 regional features.
>>>>>>>>>>>>>>>>>>>>>>>>>>
PartnerGeneHbpTbpENSTStrandBPexonTotalExonProtein feature loci*BPlociTotalLenProtein featureProtein feature note
HgeneSLC2A1chr1:43424305chr1:43830465ENST00000426263-110282_2886493RegionNote=Monosaccharide binding
HgeneSLC2A1chr1:43424305chr1:43830465ENST00000426263-110113_1206493Topological domainExtracellular
HgeneSLC2A1chr1:43424305chr1:43830465ENST00000426263-110145_1556493Topological domainCytoplasmic
HgeneSLC2A1chr1:43424305chr1:43830465ENST00000426263-110177_1856493Topological domainExtracellular
HgeneSLC2A1chr1:43424305chr1:43830465ENST00000426263-1101_116493Topological domainCytoplasmic
HgeneSLC2A1chr1:43424305chr1:43830465ENST00000426263-110207_2716493Topological domainCytoplasmic
HgeneSLC2A1chr1:43424305chr1:43830465ENST00000426263-110294_3066493Topological domainExtracellular
HgeneSLC2A1chr1:43424305chr1:43830465ENST00000426263-110329_3346493Topological domainCytoplasmic
HgeneSLC2A1chr1:43424305chr1:43830465ENST00000426263-11034_666493Topological domainExtracellular
HgeneSLC2A1chr1:43424305chr1:43830465ENST00000426263-110356_3656493Topological domainExtracellular
HgeneSLC2A1chr1:43424305chr1:43830465ENST00000426263-110389_4016493Topological domainCytoplasmic
HgeneSLC2A1chr1:43424305chr1:43830465ENST00000426263-110423_4296493Topological domainExtracellular
HgeneSLC2A1chr1:43424305chr1:43830465ENST00000426263-110451_4926493Topological domainCytoplasmic
HgeneSLC2A1chr1:43424305chr1:43830465ENST00000426263-11088_906493Topological domainCytoplasmic
HgeneSLC2A1chr1:43424305chr1:43830465ENST00000426263-110121_1446493TransmembraneNote=Helical%3B Name%3D4
HgeneSLC2A1chr1:43424305chr1:43830465ENST00000426263-11012_336493TransmembraneNote=Helical%3B Name%3D1
HgeneSLC2A1chr1:43424305chr1:43830465ENST00000426263-110156_1766493TransmembraneNote=Helical%3B Name%3D5
HgeneSLC2A1chr1:43424305chr1:43830465ENST00000426263-110186_2066493TransmembraneNote=Helical%3B Name%3D6
HgeneSLC2A1chr1:43424305chr1:43830465ENST00000426263-110272_2936493TransmembraneNote=Helical%3B Name%3D7
HgeneSLC2A1chr1:43424305chr1:43830465ENST00000426263-110307_3286493TransmembraneNote=Helical%3B Name%3D8
HgeneSLC2A1chr1:43424305chr1:43830465ENST00000426263-110335_3556493TransmembraneNote=Helical%3B Name%3D9
HgeneSLC2A1chr1:43424305chr1:43830465ENST00000426263-110366_3886493TransmembraneNote=Helical%3B Name%3D10
HgeneSLC2A1chr1:43424305chr1:43830465ENST00000426263-110402_4226493TransmembraneNote=Helical%3B Name%3D11
HgeneSLC2A1chr1:43424305chr1:43830465ENST00000426263-110430_4506493TransmembraneNote=Helical%3B Name%3D12
HgeneSLC2A1chr1:43424305chr1:43830465ENST00000426263-11067_876493TransmembraneNote=Helical%3B Name%3D2
HgeneSLC2A1chr1:43424305chr1:43830465ENST00000426263-11091_1126493TransmembraneNote=Helical%3B Name%3D3
TgeneELOVL1chr1:43424305chr1:43830465ENST00000372458-3823_43106280TransmembraneHelical
TgeneELOVL1chr1:43424305chr1:43830465ENST00000372458-3861_81106280TransmembraneHelical
TgeneELOVL1chr1:43424305chr1:43830465ENST00000413844-2723_4379253TransmembraneHelical
TgeneELOVL1chr1:43424305chr1:43830465ENST00000413844-2761_8179253TransmembraneHelical


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FusionGeneSequence for SLC2A1_ELOVL1


check button For in-frame fusion transcripts, we provide the fusion transcript sequences and fusion amino acid sequences.
(nt: nucleotides, aa: amino acids)

* Fusion amino acid sequences.
>In-frame_SLC2A1_ENST00000426263_chr1_43424305_-_ELOVL1_ENST00000372458_chr1_43830465_-_180aa
MEPSSKMVRVAWLFLFSKFIELMDTVIFILRKKDGQVTFLHVFHHSVLPWSWWWGVKIAPGGMGSFHAMINSSVHVIMYLYYGLSAFGPV
AQPYLWWKKHMTAIQLIQFVLVSLHISQYYFMSSCNYQYPVIIHLIWMYGTIFFMLFSNFWYHSYTKGKRLPRALQQNGAPGIAKVKANX

>In-frame_SLC2A1_ENST00000426263_chr1_43424305_-_ELOVL1_ENST00000413844_chr1_43830465_-_180aa
MEPSSKMVRVAWLFLFSKFIELMDTVIFILRKKDGQVTFLHVFHHSVLPWSWWWGVKIAPGGMGSFHAMINSSVHVIMYLYYGLSAFGPV
AQPYLWWKKHMTAIQLIQFVLVSLHISQYYFMSSCNYQYPVIIHLIWMYGTIFFMLFSNFWYHSYTKGKRLPRALQQNGAPGIAKVKANX

>In-frame_SLC2A1_ENST00000415851_chr1_43424305_-_ELOVL1_ENST00000372458_chr1_43830465_-_180aa
MEPSSKMVRVAWLFLFSKFIELMDTVIFILRKKDGQVTFLHVFHHSVLPWSWWWGVKIAPGGMGSFHAMINSSVHVIMYLYYGLSAFGPV
AQPYLWWKKHMTAIQLIQFVLVSLHISQYYFMSSCNYQYPVIIHLIWMYGTIFFMLFSNFWYHSYTKGKRLPRALQQNGAPGIAKVKANX

>In-frame_SLC2A1_ENST00000415851_chr1_43424305_-_ELOVL1_ENST00000413844_chr1_43830465_-_180aa
MEPSSKMVRVAWLFLFSKFIELMDTVIFILRKKDGQVTFLHVFHHSVLPWSWWWGVKIAPGGMGSFHAMINSSVHVIMYLYYGLSAFGPV
AQPYLWWKKHMTAIQLIQFVLVSLHISQYYFMSSCNYQYPVIIHLIWMYGTIFFMLFSNFWYHSYTKGKRLPRALQQNGAPGIAKVKANX

>In-frame_SLC2A1_ENST00000372500_chr1_43424305_-_ELOVL1_ENST00000372458_chr1_43830465_-_180aa
MEPSSKMVRVAWLFLFSKFIELMDTVIFILRKKDGQVTFLHVFHHSVLPWSWWWGVKIAPGGMGSFHAMINSSVHVIMYLYYGLSAFGPV
AQPYLWWKKHMTAIQLIQFVLVSLHISQYYFMSSCNYQYPVIIHLIWMYGTIFFMLFSNFWYHSYTKGKRLPRALQQNGAPGIAKVKANX

>In-frame_SLC2A1_ENST00000372500_chr1_43424305_-_ELOVL1_ENST00000413844_chr1_43830465_-_180aa
MEPSSKMVRVAWLFLFSKFIELMDTVIFILRKKDGQVTFLHVFHHSVLPWSWWWGVKIAPGGMGSFHAMINSSVHVIMYLYYGLSAFGPV
AQPYLWWKKHMTAIQLIQFVLVSLHISQYYFMSSCNYQYPVIIHLIWMYGTIFFMLFSNFWYHSYTKGKRLPRALQQNGAPGIAKVKANX


* Fusion transcript sequences (only coding sequence (CDS) region).
>In-frame_SLC2A1_ENST00000426263_chr1_43424305_-_ELOVL1_ENST00000372458_chr1_43830465_-_540nt
ATGGAGCCCAGCAGCAAGATGGTTCGGGTGGCCTGGCTCTTCCTCTTCTCCAAGTTCATTGAGCTGATGGACACAGTGATCTTTATTCTC
CGAAAGAAAGACGGGCAGGTGACCTTCCTACATGTCTTCCATCACTCTGTGCTTCCCTGGAGCTGGTGGTGGGGGGTAAAGATTGCCCCG
GGAGGAATGGGCTCTTTCCATGCCATGATAAACTCTTCCGTGCATGTCATAATGTACCTGTACTACGGATTATCTGCCTTTGGCCCTGTG
GCACAACCCTACCTTTGGTGGAAAAAGCACATGACAGCCATTCAGCTGATCCAGTTTGTCCTGGTCTCACTGCACATCTCCCAGTACTAC
TTTATGTCCAGCTGTAACTACCAGTACCCAGTCATTATTCACCTCATCTGGATGTATGGCACCATCTTCTTCATGCTGTTCTCCAACTTC
TGGTATCACTCTTATACCAAGGGCAAGCGGCTGCCCCGTGCACTTCAGCAAAATGGAGCTCCAGGTATTGCCAAGGTCAAGGCCAACTGA

>In-frame_SLC2A1_ENST00000426263_chr1_43424305_-_ELOVL1_ENST00000413844_chr1_43830465_-_540nt
ATGGAGCCCAGCAGCAAGATGGTTCGGGTGGCCTGGCTCTTCCTCTTCTCCAAGTTCATTGAGCTGATGGACACAGTGATCTTTATTCTC
CGAAAGAAAGACGGGCAGGTGACCTTCCTACATGTCTTCCATCACTCTGTGCTTCCCTGGAGCTGGTGGTGGGGGGTAAAGATTGCCCCG
GGAGGAATGGGCTCTTTCCATGCCATGATAAACTCTTCCGTGCATGTCATAATGTACCTGTACTACGGATTATCTGCCTTTGGCCCTGTG
GCACAACCCTACCTTTGGTGGAAAAAGCACATGACAGCCATTCAGCTGATCCAGTTTGTCCTGGTCTCACTGCACATCTCCCAGTACTAC
TTTATGTCCAGCTGTAACTACCAGTACCCAGTCATTATTCACCTCATCTGGATGTATGGCACCATCTTCTTCATGCTGTTCTCCAACTTC
TGGTATCACTCTTATACCAAGGGCAAGCGGCTGCCCCGTGCACTTCAGCAAAATGGAGCTCCAGGTATTGCCAAGGTCAAGGCCAACTGA

>In-frame_SLC2A1_ENST00000415851_chr1_43424305_-_ELOVL1_ENST00000372458_chr1_43830465_-_540nt
ATGGAGCCCAGCAGCAAGATGGTTCGGGTGGCCTGGCTCTTCCTCTTCTCCAAGTTCATTGAGCTGATGGACACAGTGATCTTTATTCTC
CGAAAGAAAGACGGGCAGGTGACCTTCCTACATGTCTTCCATCACTCTGTGCTTCCCTGGAGCTGGTGGTGGGGGGTAAAGATTGCCCCG
GGAGGAATGGGCTCTTTCCATGCCATGATAAACTCTTCCGTGCATGTCATAATGTACCTGTACTACGGATTATCTGCCTTTGGCCCTGTG
GCACAACCCTACCTTTGGTGGAAAAAGCACATGACAGCCATTCAGCTGATCCAGTTTGTCCTGGTCTCACTGCACATCTCCCAGTACTAC
TTTATGTCCAGCTGTAACTACCAGTACCCAGTCATTATTCACCTCATCTGGATGTATGGCACCATCTTCTTCATGCTGTTCTCCAACTTC
TGGTATCACTCTTATACCAAGGGCAAGCGGCTGCCCCGTGCACTTCAGCAAAATGGAGCTCCAGGTATTGCCAAGGTCAAGGCCAACTGA

>In-frame_SLC2A1_ENST00000415851_chr1_43424305_-_ELOVL1_ENST00000413844_chr1_43830465_-_540nt
ATGGAGCCCAGCAGCAAGATGGTTCGGGTGGCCTGGCTCTTCCTCTTCTCCAAGTTCATTGAGCTGATGGACACAGTGATCTTTATTCTC
CGAAAGAAAGACGGGCAGGTGACCTTCCTACATGTCTTCCATCACTCTGTGCTTCCCTGGAGCTGGTGGTGGGGGGTAAAGATTGCCCCG
GGAGGAATGGGCTCTTTCCATGCCATGATAAACTCTTCCGTGCATGTCATAATGTACCTGTACTACGGATTATCTGCCTTTGGCCCTGTG
GCACAACCCTACCTTTGGTGGAAAAAGCACATGACAGCCATTCAGCTGATCCAGTTTGTCCTGGTCTCACTGCACATCTCCCAGTACTAC
TTTATGTCCAGCTGTAACTACCAGTACCCAGTCATTATTCACCTCATCTGGATGTATGGCACCATCTTCTTCATGCTGTTCTCCAACTTC
TGGTATCACTCTTATACCAAGGGCAAGCGGCTGCCCCGTGCACTTCAGCAAAATGGAGCTCCAGGTATTGCCAAGGTCAAGGCCAACTGA

>In-frame_SLC2A1_ENST00000372500_chr1_43424305_-_ELOVL1_ENST00000372458_chr1_43830465_-_540nt
ATGGAGCCCAGCAGCAAGATGGTTCGGGTGGCCTGGCTCTTCCTCTTCTCCAAGTTCATTGAGCTGATGGACACAGTGATCTTTATTCTC
CGAAAGAAAGACGGGCAGGTGACCTTCCTACATGTCTTCCATCACTCTGTGCTTCCCTGGAGCTGGTGGTGGGGGGTAAAGATTGCCCCG
GGAGGAATGGGCTCTTTCCATGCCATGATAAACTCTTCCGTGCATGTCATAATGTACCTGTACTACGGATTATCTGCCTTTGGCCCTGTG
GCACAACCCTACCTTTGGTGGAAAAAGCACATGACAGCCATTCAGCTGATCCAGTTTGTCCTGGTCTCACTGCACATCTCCCAGTACTAC
TTTATGTCCAGCTGTAACTACCAGTACCCAGTCATTATTCACCTCATCTGGATGTATGGCACCATCTTCTTCATGCTGTTCTCCAACTTC
TGGTATCACTCTTATACCAAGGGCAAGCGGCTGCCCCGTGCACTTCAGCAAAATGGAGCTCCAGGTATTGCCAAGGTCAAGGCCAACTGA

>In-frame_SLC2A1_ENST00000372500_chr1_43424305_-_ELOVL1_ENST00000413844_chr1_43830465_-_540nt
ATGGAGCCCAGCAGCAAGATGGTTCGGGTGGCCTGGCTCTTCCTCTTCTCCAAGTTCATTGAGCTGATGGACACAGTGATCTTTATTCTC
CGAAAGAAAGACGGGCAGGTGACCTTCCTACATGTCTTCCATCACTCTGTGCTTCCCTGGAGCTGGTGGTGGGGGGTAAAGATTGCCCCG
GGAGGAATGGGCTCTTTCCATGCCATGATAAACTCTTCCGTGCATGTCATAATGTACCTGTACTACGGATTATCTGCCTTTGGCCCTGTG
GCACAACCCTACCTTTGGTGGAAAAAGCACATGACAGCCATTCAGCTGATCCAGTTTGTCCTGGTCTCACTGCACATCTCCCAGTACTAC
TTTATGTCCAGCTGTAACTACCAGTACCCAGTCATTATTCACCTCATCTGGATGTATGGCACCATCTTCTTCATGCTGTTCTCCAACTTC
TGGTATCACTCTTATACCAAGGGCAAGCGGCTGCCCCGTGCACTTCAGCAAAATGGAGCTCCAGGTATTGCCAAGGTCAAGGCCAACTGA


* Fusion transcript sequences (Full-length transcript).
>In-frame_SLC2A1_ENST00000426263_chr1_43424305_-_ELOVL1_ENST00000372458_chr1_43830465_-_1238nt
TAGTCGCGGGTCCCCGAGTGAGCACGCCAGGGAGCAGGAGACCAAACGACGGGGGTCGGAGTCAGAGTCGCAGTGGGAGTCCCCGGACCG
GAGCACGAGCCTGAGCGGGAGAGCGCCGCTCGCACGCCCGTCGCCACCCGCGTACCCGGCGCAGCCAGAGCCACCAGCGCAGCGCTGCCA
TGGAGCCCAGCAGCAAGATGGTTCGGGTGGCCTGGCTCTTCCTCTTCTCCAAGTTCATTGAGCTGATGGACACAGTGATCTTTATTCTCC
GAAAGAAAGACGGGCAGGTGACCTTCCTACATGTCTTCCATCACTCTGTGCTTCCCTGGAGCTGGTGGTGGGGGGTAAAGATTGCCCCGG
GAGGAATGGGCTCTTTCCATGCCATGATAAACTCTTCCGTGCATGTCATAATGTACCTGTACTACGGATTATCTGCCTTTGGCCCTGTGG
CACAACCCTACCTTTGGTGGAAAAAGCACATGACAGCCATTCAGCTGATCCAGTTTGTCCTGGTCTCACTGCACATCTCCCAGTACTACT
TTATGTCCAGCTGTAACTACCAGTACCCAGTCATTATTCACCTCATCTGGATGTATGGCACCATCTTCTTCATGCTGTTCTCCAACTTCT
GGTATCACTCTTATACCAAGGGCAAGCGGCTGCCCCGTGCACTTCAGCAAAATGGAGCTCCAGGTATTGCCAAGGTCAAGGCCAACTGAG
AAGCATGGCCTAGATAGGCGCCCACCTAAGTGCCTCAGGACTGCACCTTAGGGCAGTGTCCGTCAGTGCCCTCTCCACCTACACCTGTGA
CCAAGGCTTATGTGGTCAGGACTGAGCAGGGGACTGGCCCTCCCCTCCCCACAGCTGCTCTACAGGGACCACGGCTTTGGTTCCTCACCC
ACTTCCCCCGGGCAGCTCCAGGGATGTGGCCTCATTGCTGTCTGCCACTCCAGAGCTGGGGGCTAAAAGGGCTGTACAGTTATTTCCCCC
TCCCTGCCTTAAAACTTGGGAGAGGAGCACTCAGGGCTGGCCCCACAAAGGGTCTCGTGGCCTTTTTCCTCACACAGAAGAGGTCAGCAA
TAATGTCACTGTGGACCCAGTCTCACTCCTCCACCCCACACACTGAAGCAGTAGCTTCTGGGCCAAAGGTCAGGGTGGGCGGGGGCCTGG

>In-frame_SLC2A1_ENST00000426263_chr1_43424305_-_ELOVL1_ENST00000413844_chr1_43830465_-_1233nt
TAGTCGCGGGTCCCCGAGTGAGCACGCCAGGGAGCAGGAGACCAAACGACGGGGGTCGGAGTCAGAGTCGCAGTGGGAGTCCCCGGACCG
GAGCACGAGCCTGAGCGGGAGAGCGCCGCTCGCACGCCCGTCGCCACCCGCGTACCCGGCGCAGCCAGAGCCACCAGCGCAGCGCTGCCA
TGGAGCCCAGCAGCAAGATGGTTCGGGTGGCCTGGCTCTTCCTCTTCTCCAAGTTCATTGAGCTGATGGACACAGTGATCTTTATTCTCC
GAAAGAAAGACGGGCAGGTGACCTTCCTACATGTCTTCCATCACTCTGTGCTTCCCTGGAGCTGGTGGTGGGGGGTAAAGATTGCCCCGG
GAGGAATGGGCTCTTTCCATGCCATGATAAACTCTTCCGTGCATGTCATAATGTACCTGTACTACGGATTATCTGCCTTTGGCCCTGTGG
CACAACCCTACCTTTGGTGGAAAAAGCACATGACAGCCATTCAGCTGATCCAGTTTGTCCTGGTCTCACTGCACATCTCCCAGTACTACT
TTATGTCCAGCTGTAACTACCAGTACCCAGTCATTATTCACCTCATCTGGATGTATGGCACCATCTTCTTCATGCTGTTCTCCAACTTCT
GGTATCACTCTTATACCAAGGGCAAGCGGCTGCCCCGTGCACTTCAGCAAAATGGAGCTCCAGGTATTGCCAAGGTCAAGGCCAACTGAG
AAGCATGGCCTAGATAGGCGCCCACCTAAGTGCCTCAGGACTGCACCTTAGGGCAGTGTCCGTCAGTGCCCTCTCCACCTACACCTGTGA
CCAAGGCTTATGTGGTCAGGACTGAGCAGGGGACTGGCCCTCCCCTCCCCACAGCTGCTCTACAGGGACCACGGCTTTGGTTCCTCACCC
ACTTCCCCCGGGCAGCTCCAGGGATGTGGCCTCATTGCTGTCTGCCACTCCAGAGCTGGGGGCTAAAAGGGCTGTACAGTTATTTCCCCC
TCCCTGCCTTAAAACTTGGGAGAGGAGCACTCAGGGCTGGCCCCACAAAGGGTCTCGTGGCCTTTTTCCTCACACAGAAGAGGTCAGCAA
TAATGTCACTGTGGACCCAGTCTCACTCCTCCACCCCACACACTGAAGCAGTAGCTTCTGGGCCAAAGGTCAGGGTGGGCGGGGGCCTGG

>In-frame_SLC2A1_ENST00000415851_chr1_43424305_-_ELOVL1_ENST00000372458_chr1_43830465_-_1237nt
AGTCGCGGGTCCCCGAGTGAGCACGCCAGGGAGCAGGAGACCAAACGACGGGGGTCGGAGTCAGAGTCGCAGTGGGAGTCCCCGGACCGG
AGCACGAGCCTGAGCGGGAGAGCGCCGCTCGCACGCCCGTCGCCACCCGCGTACCCGGCGCAGCCAGAGCCACCAGCGCAGCGCTGCCAT
GGAGCCCAGCAGCAAGATGGTTCGGGTGGCCTGGCTCTTCCTCTTCTCCAAGTTCATTGAGCTGATGGACACAGTGATCTTTATTCTCCG
AAAGAAAGACGGGCAGGTGACCTTCCTACATGTCTTCCATCACTCTGTGCTTCCCTGGAGCTGGTGGTGGGGGGTAAAGATTGCCCCGGG
AGGAATGGGCTCTTTCCATGCCATGATAAACTCTTCCGTGCATGTCATAATGTACCTGTACTACGGATTATCTGCCTTTGGCCCTGTGGC
ACAACCCTACCTTTGGTGGAAAAAGCACATGACAGCCATTCAGCTGATCCAGTTTGTCCTGGTCTCACTGCACATCTCCCAGTACTACTT
TATGTCCAGCTGTAACTACCAGTACCCAGTCATTATTCACCTCATCTGGATGTATGGCACCATCTTCTTCATGCTGTTCTCCAACTTCTG
GTATCACTCTTATACCAAGGGCAAGCGGCTGCCCCGTGCACTTCAGCAAAATGGAGCTCCAGGTATTGCCAAGGTCAAGGCCAACTGAGA
AGCATGGCCTAGATAGGCGCCCACCTAAGTGCCTCAGGACTGCACCTTAGGGCAGTGTCCGTCAGTGCCCTCTCCACCTACACCTGTGAC
CAAGGCTTATGTGGTCAGGACTGAGCAGGGGACTGGCCCTCCCCTCCCCACAGCTGCTCTACAGGGACCACGGCTTTGGTTCCTCACCCA
CTTCCCCCGGGCAGCTCCAGGGATGTGGCCTCATTGCTGTCTGCCACTCCAGAGCTGGGGGCTAAAAGGGCTGTACAGTTATTTCCCCCT
CCCTGCCTTAAAACTTGGGAGAGGAGCACTCAGGGCTGGCCCCACAAAGGGTCTCGTGGCCTTTTTCCTCACACAGAAGAGGTCAGCAAT
AATGTCACTGTGGACCCAGTCTCACTCCTCCACCCCACACACTGAAGCAGTAGCTTCTGGGCCAAAGGTCAGGGTGGGCGGGGGCCTGGG

>In-frame_SLC2A1_ENST00000415851_chr1_43424305_-_ELOVL1_ENST00000413844_chr1_43830465_-_1232nt
AGTCGCGGGTCCCCGAGTGAGCACGCCAGGGAGCAGGAGACCAAACGACGGGGGTCGGAGTCAGAGTCGCAGTGGGAGTCCCCGGACCGG
AGCACGAGCCTGAGCGGGAGAGCGCCGCTCGCACGCCCGTCGCCACCCGCGTACCCGGCGCAGCCAGAGCCACCAGCGCAGCGCTGCCAT
GGAGCCCAGCAGCAAGATGGTTCGGGTGGCCTGGCTCTTCCTCTTCTCCAAGTTCATTGAGCTGATGGACACAGTGATCTTTATTCTCCG
AAAGAAAGACGGGCAGGTGACCTTCCTACATGTCTTCCATCACTCTGTGCTTCCCTGGAGCTGGTGGTGGGGGGTAAAGATTGCCCCGGG
AGGAATGGGCTCTTTCCATGCCATGATAAACTCTTCCGTGCATGTCATAATGTACCTGTACTACGGATTATCTGCCTTTGGCCCTGTGGC
ACAACCCTACCTTTGGTGGAAAAAGCACATGACAGCCATTCAGCTGATCCAGTTTGTCCTGGTCTCACTGCACATCTCCCAGTACTACTT
TATGTCCAGCTGTAACTACCAGTACCCAGTCATTATTCACCTCATCTGGATGTATGGCACCATCTTCTTCATGCTGTTCTCCAACTTCTG
GTATCACTCTTATACCAAGGGCAAGCGGCTGCCCCGTGCACTTCAGCAAAATGGAGCTCCAGGTATTGCCAAGGTCAAGGCCAACTGAGA
AGCATGGCCTAGATAGGCGCCCACCTAAGTGCCTCAGGACTGCACCTTAGGGCAGTGTCCGTCAGTGCCCTCTCCACCTACACCTGTGAC
CAAGGCTTATGTGGTCAGGACTGAGCAGGGGACTGGCCCTCCCCTCCCCACAGCTGCTCTACAGGGACCACGGCTTTGGTTCCTCACCCA
CTTCCCCCGGGCAGCTCCAGGGATGTGGCCTCATTGCTGTCTGCCACTCCAGAGCTGGGGGCTAAAAGGGCTGTACAGTTATTTCCCCCT
CCCTGCCTTAAAACTTGGGAGAGGAGCACTCAGGGCTGGCCCCACAAAGGGTCTCGTGGCCTTTTTCCTCACACAGAAGAGGTCAGCAAT
AATGTCACTGTGGACCCAGTCTCACTCCTCCACCCCACACACTGAAGCAGTAGCTTCTGGGCCAAAGGTCAGGGTGGGCGGGGGCCTGGG

>In-frame_SLC2A1_ENST00000372500_chr1_43424305_-_ELOVL1_ENST00000372458_chr1_43830465_-_1267nt
GAGGTAGCAACAGCGAGCGTGCCGGTCGCTAGTCGCGGGTCCCCGAGTGAGCACGCCAGGGAGCAGGAGACCAAACGACGGGGGTCGGAG
TCAGAGTCGCAGTGGGAGTCCCCGGACCGGAGCACGAGCCTGAGCGGGAGAGCGCCGCTCGCACGCCCGTCGCCACCCGCGTACCCGGCG
CAGCCAGAGCCACCAGCGCAGCGCTGCCATGGAGCCCAGCAGCAAGATGGTTCGGGTGGCCTGGCTCTTCCTCTTCTCCAAGTTCATTGA
GCTGATGGACACAGTGATCTTTATTCTCCGAAAGAAAGACGGGCAGGTGACCTTCCTACATGTCTTCCATCACTCTGTGCTTCCCTGGAG
CTGGTGGTGGGGGGTAAAGATTGCCCCGGGAGGAATGGGCTCTTTCCATGCCATGATAAACTCTTCCGTGCATGTCATAATGTACCTGTA
CTACGGATTATCTGCCTTTGGCCCTGTGGCACAACCCTACCTTTGGTGGAAAAAGCACATGACAGCCATTCAGCTGATCCAGTTTGTCCT
GGTCTCACTGCACATCTCCCAGTACTACTTTATGTCCAGCTGTAACTACCAGTACCCAGTCATTATTCACCTCATCTGGATGTATGGCAC
CATCTTCTTCATGCTGTTCTCCAACTTCTGGTATCACTCTTATACCAAGGGCAAGCGGCTGCCCCGTGCACTTCAGCAAAATGGAGCTCC
AGGTATTGCCAAGGTCAAGGCCAACTGAGAAGCATGGCCTAGATAGGCGCCCACCTAAGTGCCTCAGGACTGCACCTTAGGGCAGTGTCC
GTCAGTGCCCTCTCCACCTACACCTGTGACCAAGGCTTATGTGGTCAGGACTGAGCAGGGGACTGGCCCTCCCCTCCCCACAGCTGCTCT
ACAGGGACCACGGCTTTGGTTCCTCACCCACTTCCCCCGGGCAGCTCCAGGGATGTGGCCTCATTGCTGTCTGCCACTCCAGAGCTGGGG
GCTAAAAGGGCTGTACAGTTATTTCCCCCTCCCTGCCTTAAAACTTGGGAGAGGAGCACTCAGGGCTGGCCCCACAAAGGGTCTCGTGGC
CTTTTTCCTCACACAGAAGAGGTCAGCAATAATGTCACTGTGGACCCAGTCTCACTCCTCCACCCCACACACTGAAGCAGTAGCTTCTGG
GCCAAAGGTCAGGGTGGGCGGGGGCCTGGGAATACAGCCTGTGGAGGCTGCTTACTCAACTTGTGTCTTAATTAAAAGTGACAGAGGAAA

>In-frame_SLC2A1_ENST00000372500_chr1_43424305_-_ELOVL1_ENST00000413844_chr1_43830465_-_1262nt
GAGGTAGCAACAGCGAGCGTGCCGGTCGCTAGTCGCGGGTCCCCGAGTGAGCACGCCAGGGAGCAGGAGACCAAACGACGGGGGTCGGAG
TCAGAGTCGCAGTGGGAGTCCCCGGACCGGAGCACGAGCCTGAGCGGGAGAGCGCCGCTCGCACGCCCGTCGCCACCCGCGTACCCGGCG
CAGCCAGAGCCACCAGCGCAGCGCTGCCATGGAGCCCAGCAGCAAGATGGTTCGGGTGGCCTGGCTCTTCCTCTTCTCCAAGTTCATTGA
GCTGATGGACACAGTGATCTTTATTCTCCGAAAGAAAGACGGGCAGGTGACCTTCCTACATGTCTTCCATCACTCTGTGCTTCCCTGGAG
CTGGTGGTGGGGGGTAAAGATTGCCCCGGGAGGAATGGGCTCTTTCCATGCCATGATAAACTCTTCCGTGCATGTCATAATGTACCTGTA
CTACGGATTATCTGCCTTTGGCCCTGTGGCACAACCCTACCTTTGGTGGAAAAAGCACATGACAGCCATTCAGCTGATCCAGTTTGTCCT
GGTCTCACTGCACATCTCCCAGTACTACTTTATGTCCAGCTGTAACTACCAGTACCCAGTCATTATTCACCTCATCTGGATGTATGGCAC
CATCTTCTTCATGCTGTTCTCCAACTTCTGGTATCACTCTTATACCAAGGGCAAGCGGCTGCCCCGTGCACTTCAGCAAAATGGAGCTCC
AGGTATTGCCAAGGTCAAGGCCAACTGAGAAGCATGGCCTAGATAGGCGCCCACCTAAGTGCCTCAGGACTGCACCTTAGGGCAGTGTCC
GTCAGTGCCCTCTCCACCTACACCTGTGACCAAGGCTTATGTGGTCAGGACTGAGCAGGGGACTGGCCCTCCCCTCCCCACAGCTGCTCT
ACAGGGACCACGGCTTTGGTTCCTCACCCACTTCCCCCGGGCAGCTCCAGGGATGTGGCCTCATTGCTGTCTGCCACTCCAGAGCTGGGG
GCTAAAAGGGCTGTACAGTTATTTCCCCCTCCCTGCCTTAAAACTTGGGAGAGGAGCACTCAGGGCTGGCCCCACAAAGGGTCTCGTGGC
CTTTTTCCTCACACAGAAGAGGTCAGCAATAATGTCACTGTGGACCCAGTCTCACTCCTCCACCCCACACACTGAAGCAGTAGCTTCTGG
GCCAAAGGTCAGGGTGGGCGGGGGCCTGGGAATACAGCCTGTGGAGGCTGCTTACTCAACTTGTGTCTTAATTAAAAGTGACAGAGGAAA


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FusionGenePPI for SLC2A1_ELOVL1


check button Go to ChiPPI (Chimeric Protein-Protein interactions) to see the chimeric PPI interaction in

ChiPPI page

.

check button Protein-protein interactors with each fusion partner protein in wild-type (BIOGRID-3.4.160)
HgeneHgene's interactorsTgeneTgene's interactors
SLC2A1COPS6, PDIA3, STOM, PTK2B, CANX, CALR, GIPC1, CD55, VCAM1, ATF2, ITGA4, VHL, TXNIP, ILK, IRAK1, JAK2, TYK2, HSPB2, STK17B, NCSTN, NEIL3, TRIM25ELOVL1PSMD10, TWF2, GLP1R, CERS2, HSD17B12, TECR, MOV10, NXF1, TCTN3


check button - Retained PPIs in in-frame fusion.
PartnerGeneHbpTbpENSTStrandBPexonTotalExonProtein feature loci*BPlociTotalLenStill interaction with


check button - Lost PPIs in in-frame fusion.
PartnerGeneHbpTbpENSTStrandBPexonTotalExonProtein feature loci*BPlociTotalLenInteraction lost with


check button - Retained PPIs, but lost function due to frame-shift fusion.
PartnerGeneHbpTbpENSTStrandBPexonTotalExonProtein feature loci*BPlociTotalLenInteraction lost with


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RelatedDrugs for SLC2A1_ELOVL1


check button Drugs targeting genes involved in this fusion gene.
(DrugBank Version 5.1.0 2018-04-02)
PartnerGeneUniProtAccDrugBank IDDrug nameDrug activityDrug typeDrug status

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RelatedDiseases for SLC2A1_ELOVL1


check button Diseases associated with fusion partners.
(DisGeNet 4.0)
PartnerGeneDisease IDDisease name# pubmedsSource
HgeneSLC2A1C1847501Glut1 Deficiency Syndrome14CTD_human;ORPHANET;UNIPROT
HgeneSLC2A1C1842534DYSTONIA 18 (disorder)11CTD_human;ORPHANET;UNIPROT
HgeneSLC2A1C3553859EPILEPSY, IDIOPATHIC GENERALIZED, SUSCEPTIBILITY TO, 124UNIPROT
HgeneSLC2A1C0008073Developmental Disabilities3CTD_human
HgeneSLC2A1C0036572Seizures3CTD_human;HPO
HgeneSLC2A1C0025958Microcephaly2CTD_human
HgeneSLC2A1C1837206Cryohydrocytosis, Stomatin-Deficient, with Mental Retardation, Seizures, Cataracts, and Massive Hepatosplenomegaly2ORPHANET;UNIPROT
HgeneSLC2A1C0004134Ataxia1CTD_human
HgeneSLC2A1C0007124Noninfiltrating Intraductal Carcinoma1CTD_human
HgeneSLC2A1C0007134Renal Cell Carcinoma1CTD_human
HgeneSLC2A1C0007621Neoplastic Cell Transformation1CTD_human
HgeneSLC2A1C0009375Colonic Neoplasms1CTD_human
HgeneSLC2A1C0011860Diabetes Mellitus, Non-Insulin-Dependent1CTD_human
HgeneSLC2A1C0023903Liver neoplasms1CTD_human
HgeneSLC2A1C0025521Inborn Errors of Metabolism1CTD_human
HgeneSLC2A1C0027765nervous system disorder1CTD_human
HgeneSLC2A1C0029408Degenerative polyarthritis1CTD_human
HgeneSLC2A1C0031149Peritoneal Neoplasms1CTD_human
HgeneSLC2A1C0345967Malignant mesothelioma1CTD_human
HgeneSLC2A1C0919267ovarian neoplasm1CTD_human
HgeneSLC2A1C1176475Ductal Carcinoma1CTD_human
HgeneSLC2A1C1458155Mammary Neoplasms1CTD_human
HgeneSLC2A1C2239176Liver carcinoma1CTD_human
HgeneSLC2A1C3714756Intellectual Disability1CTD_human;HPO