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Center for Computational Systems Medicine
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FusionGeneSummary

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FusionProtFeature

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FusionGeneSequence

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Fusion gene ID: 34297

FusionGeneSummary for SLC2A13_FAM120A

check button Fusion gene summary
Fusion gene informationFusion gene name: SLC2A13_FAM120A
Fusion gene ID: 34297
HgeneTgene
Gene symbol

SLC2A13

FAM120A

Gene ID

114134

23196

Gene namesolute carrier family 2 member 13family with sequence similarity 120A
SynonymsHMITC9orf10|HBVPTPAP|OSSA
Cytomap

12q12

9q22.31

Type of geneprotein-codingprotein-coding
Descriptionproton myo-inositol cotransporterH(+)-myo-inositol symporterh(+)-myo-inositol cotransporterproton (H+) myo-inositol symportersolute carrier family 2 (facilitated glucose transporter), member 13constitutive coactivator of PPAR-gamma-like protein 1oxidative stess-associated Src activatoroxidative stress-associated Src activator
Modification date2018052320180523
UniProtAcc

Q96QE2

Q9NZB2

Ensembl transtripts involved in fusion geneENST00000280871, ENST00000380858, 
ENST00000277165, ENST00000375389, 
ENST00000340893, ENST00000333936, 
ENST00000475933, 
Fusion gene scores* DoF score9 X 5 X 7=3153 X 3 X 3=27
# samples 73
** MAII scorelog2(7/315*10)=-2.16992500144231
possibly effective Gene in Pan-Cancer Fusion Genes (peGinPCFGs).
DoF>8 and MAII<0		log2(3/27*10)=0.15200309344505
effective Gene in Pan-Cancer Fusion Genes (eGinPCFGs).
DoF>8 and MAII>0
Context

PubMed: SLC2A13 [Title/Abstract] AND FAM120A [Title/Abstract] AND fusion [Title/Abstract]

Functional or gene categories assigned by FusionGDB annotation
* DoF score (Degree of Frequency) = # partners X # break points X # cancer types
** MAII score (Major Active Isofusion Index) = log2(# samples/DoF score*10)

check button Gene ontology of each fusion partner gene with evidence of Inferred from Direct Assay (IDA) from Entrez
PartnerGeneGO IDGO termPubMed ID

check button Fusion gene information from three resources
(ChiTars (NAR, 2018), tumorfusions (NAR, 2018), Gao et al. (Cell, 2018))
* All genome coordinats were lifted-over on hg19.
* Click on the break point to see the gene structure around the break point region using the UCSC Genome Browser.
Data typeSourceCancer typeSampleHgeneHchrHbpHstrandTgeneTchrTbpTstrand
TCGALDBLCATCGA-CU-A0YN-01ASLC2A13chr12

40422103

-FAM120Achr9

96323391

+
* LD: Li Ding group's fusion gene list
  RV: Roel Verhaak group's fusion gene list
  ChiTaRs fusion database

check button Open reading frame (ORF) analsis of fusion genes based on Ensembl gene isoform structure.
* Click on the break point to see the gene structure around the break point region using the UCSC Genome Browser.
ORFHenstTenstHgeneHchrHbpHstrandTgeneTchrTbpTstrand
In-frameENST00000280871ENST00000277165SLC2A13chr12

40422103

-FAM120Achr9

96323391

+
5CDS-intronENST00000280871ENST00000375389SLC2A13chr12

40422103

-FAM120Achr9

96323391

+
5CDS-intronENST00000280871ENST00000340893SLC2A13chr12

40422103

-FAM120Achr9

96323391

+
5CDS-intronENST00000280871ENST00000333936SLC2A13chr12

40422103

-FAM120Achr9

96323391

+
5CDS-intronENST00000280871ENST00000475933SLC2A13chr12

40422103

-FAM120Achr9

96323391

+
In-frameENST00000380858ENST00000277165SLC2A13chr12

40422103

-FAM120Achr9

96323391

+
5CDS-intronENST00000380858ENST00000375389SLC2A13chr12

40422103

-FAM120Achr9

96323391

+
5CDS-intronENST00000380858ENST00000340893SLC2A13chr12

40422103

-FAM120Achr9

96323391

+
5CDS-intronENST00000380858ENST00000333936SLC2A13chr12

40422103

-FAM120Achr9

96323391

+
5CDS-intronENST00000380858ENST00000475933SLC2A13chr12

40422103

-FAM120Achr9

96323391

+

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FusionProtFeatures for SLC2A13_FAM120A


check buttonMain function of each fusion partner protein. (from UniProt)
HgeneTgene
SLC2A13

Q96QE2

FAM120A

Q9NZB2

H(+)-myo-inositol cotransporter. Can also transportrelated stereoisomers. {ECO:0000269|PubMed:11500374}.

check buttonRetention analysis result of each fusion partner protein across 39 protein features of UniProt such as six molecule processing features, 13 region features, four site features, six amino acid modification features, two natural variation features, five experimental info features, and 3 secondary structure features. Here, because of limited space for viewing, we only show the protein feature retention information belong to the 13 regional features. All retention annotation result can be downloaded at

download page

.

* Minus value of BPloci means that the break pointn is located before the CDS.
- In-frame and retained protein feature among the 13 regional features.
>
PartnerGeneHbpTbpENSTStrandBPexonTotalExonProtein feature loci*BPlociTotalLenProtein featureProtein feature note
HgeneSLC2A13chr12:40422103chr9:96323391ENST00000280871-310147_148308649Topological domainCytoplasmic
HgeneSLC2A13chr12:40422103chr9:96323391ENST00000280871-310170_178308649Topological domainExtracellular
HgeneSLC2A13chr12:40422103chr9:96323391ENST00000280871-3101_76308649Topological domainCytoplasmic
HgeneSLC2A13chr12:40422103chr9:96323391ENST00000280871-310200_212308649Topological domainCytoplasmic
HgeneSLC2A13chr12:40422103chr9:96323391ENST00000280871-310234_239308649Topological domainExtracellular
HgeneSLC2A13chr12:40422103chr9:96323391ENST00000280871-31098_125308649Topological domainExtracellular
HgeneSLC2A13chr12:40422103chr9:96323391ENST00000280871-310126_146308649TransmembraneHelical%3B Name%3D2
HgeneSLC2A13chr12:40422103chr9:96323391ENST00000280871-310149_169308649TransmembraneHelical%3B Name%3D3
HgeneSLC2A13chr12:40422103chr9:96323391ENST00000280871-310179_199308649TransmembraneHelical%3B Name%3D4
HgeneSLC2A13chr12:40422103chr9:96323391ENST00000280871-310213_233308649TransmembraneHelical%3B Name%3D5
HgeneSLC2A13chr12:40422103chr9:96323391ENST00000280871-310240_260308649TransmembraneHelical%3B Name%3D6
HgeneSLC2A13chr12:40422103chr9:96323391ENST00000280871-31077_97308649TransmembraneHelical%3B Name%3D1
TgeneFAM120Achr12:40422103chr9:96323391ENST00000375389+09829_1118-9629RegionNote=RNA binding

- In-frame and not-retained protein feature among the 13 regional features.
>>>>>>>>>>>>>
PartnerGeneHbpTbpENSTStrandBPexonTotalExonProtein feature loci*BPlociTotalLenProtein featureProtein feature note
HgeneSLC2A13chr12:40422103chr9:96323391ENST00000280871-310261_324308649Topological domainCytoplasmic
HgeneSLC2A13chr12:40422103chr9:96323391ENST00000280871-310346_363308649Topological domainExtracellular
HgeneSLC2A13chr12:40422103chr9:96323391ENST00000280871-310385_393308649Topological domainCytoplasmic
HgeneSLC2A13chr12:40422103chr9:96323391ENST00000280871-310415_508308649Topological domainExtracellular
HgeneSLC2A13chr12:40422103chr9:96323391ENST00000280871-310530_549308649Topological domainCytoplasmic
HgeneSLC2A13chr12:40422103chr9:96323391ENST00000280871-310571_573308649Topological domainExtracellular
HgeneSLC2A13chr12:40422103chr9:96323391ENST00000280871-310595_648308649Topological domainCytoplasmic
HgeneSLC2A13chr12:40422103chr9:96323391ENST00000280871-310325_345308649TransmembraneHelical%3B Name%3D7
HgeneSLC2A13chr12:40422103chr9:96323391ENST00000280871-310364_384308649TransmembraneHelical%3B Name%3D8
HgeneSLC2A13chr12:40422103chr9:96323391ENST00000280871-310394_414308649TransmembraneHelical%3B Name%3D9
HgeneSLC2A13chr12:40422103chr9:96323391ENST00000280871-310509_529308649TransmembraneHelical%3B Name%3D10
HgeneSLC2A13chr12:40422103chr9:96323391ENST00000280871-310550_570308649TransmembraneHelical%3B Name%3D11
HgeneSLC2A13chr12:40422103chr9:96323391ENST00000280871-310574_594308649TransmembraneHelical%3B Name%3D12
TgeneFAM120Achr12:40422103chr9:96323391ENST00000277165+1418829_11189351119RegionNote=RNA binding
TgeneFAM120Achr12:40422103chr9:96323391ENST00000333936+1519829_11189631147RegionNote=RNA binding
TgeneFAM120Achr12:40422103chr9:96323391ENST00000340893+1317829_11188891073RegionNote=RNA binding


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FusionGeneSequence for SLC2A13_FAM120A


check button For in-frame fusion transcripts, we provide the fusion transcript sequences and fusion amino acid sequences.
(nt: nucleotides, aa: amino acids)

* Fusion amino acid sequences.
>In-frame_SLC2A13_ENST00000280871_chr12_40422103_-_FAM120A_ENST00000277165_chr9_96323391_+_492aa
MSRKASENVEYTLRSLSSLMGERRRKQPEPDAASAAGECSLLAAAESSTSLQSAGAGGGGVGDLERAARRQFQQDETPAFVYVVAVFSAL
GGFLFGYDTGVVSGAMLLLKRQLSLDALWQELLVSSTVGAAAVSALAGGALNGVFGRRAAILLASALFTAGSAVLAAANNKETLLAGRLV
VGLGIGIASMTVPVYIAEVSPPNLRGRLVTINTLFITGGQFFASVVDGAFSYLQKDGWRYMLGLAAVPAVIQFFGFLFLPESPRWLIQKG
QTQKARRILSQMRGNQTIDEEYDSIKNNIEEEEKEVGSGVQPIPSQGGKLEIAGTVVGHWAGSRRGRGGRGPFPLQVVSVGGPARGRPRG
VISTPVIRTFGRGGRYYGRGYKNQAAIQGRPPYAASAEEVAKELKSKSGESKSSAMSSDGSLAENGVMAEEKPAPQMNGSTGDARAPSHS

>In-frame_SLC2A13_ENST00000380858_chr12_40422103_-_FAM120A_ENST00000277165_chr9_96323391_+_492aa
MSRKASENVEYTLRSLSSLMGERRRKQPEPDAASAAGECSLLAAAESSTSLQSAGAGGGGVGDLERAARRQFQQDETPAFVYVVAVFSAL
GGFLFGYDTGVVSGAMLLLKRQLSLDALWQELLVSSTVGAAAVSALAGGALNGVFGRRAAILLASALFTAGSAVLAAANNKETLLAGRLV
VGLGIGIASMTVPVYIAEVSPPNLRGRLVTINTLFITGGQFFASVVDGAFSYLQKDGWRYMLGLAAVPAVIQFFGFLFLPESPRWLIQKG
QTQKARRILSQMRGNQTIDEEYDSIKNNIEEEEKEVGSGVQPIPSQGGKLEIAGTVVGHWAGSRRGRGGRGPFPLQVVSVGGPARGRPRG
VISTPVIRTFGRGGRYYGRGYKNQAAIQGRPPYAASAEEVAKELKSKSGESKSSAMSSDGSLAENGVMAEEKPAPQMNGSTGDARAPSHS


* Fusion transcript sequences (only coding sequence (CDS) region).
>In-frame_SLC2A13_ENST00000280871_chr12_40422103_-_FAM120A_ENST00000277165_chr9_96323391_+_1476nt
ATGTCCCGCAAGGCAAGCGAGAATGTGGAGTACACGCTGCGGAGCCTGAGCAGCCTGATGGGCGAGCGGCGCAGGAAGCAGCCGGAGCCG
GACGCGGCGAGCGCGGCCGGGGAGTGCAGCCTCCTGGCTGCCGCCGAATCGAGCACCAGCCTGCAGAGCGCGGGCGCGGGCGGCGGCGGC
GTCGGGGACCTGGAGCGCGCGGCGCGGCGGCAGTTCCAGCAGGACGAGACCCCCGCCTTCGTGTACGTGGTGGCCGTCTTCTCCGCGCTG
GGCGGCTTCCTGTTTGGCTATGACACCGGGGTGGTGTCAGGGGCCATGCTGCTGCTCAAGCGGCAGCTCAGTCTGGACGCGCTGTGGCAG
GAGCTGCTGGTGTCCAGCACGGTGGGGGCGGCTGCCGTCTCGGCGCTGGCCGGAGGCGCCCTCAACGGCGTCTTCGGCCGCCGCGCTGCC
ATCCTCCTGGCCAGTGCCCTCTTCACCGCCGGCTCCGCGGTGCTGGCTGCGGCCAACAACAAGGAGACACTGCTCGCCGGCCGCCTGGTC
GTGGGACTCGGCATCGGCATTGCTTCTATGACAGTGCCAGTGTACATTGCGGAGGTCTCACCACCCAATTTAAGAGGCCGATTAGTCACC
ATTAATACCCTCTTCATCACAGGAGGGCAGTTCTTTGCAAGTGTTGTTGATGGAGCCTTCAGTTATCTCCAGAAGGATGGATGGAGGTAC
ATGTTGGGACTTGCAGCAGTTCCGGCGGTTATACAGTTTTTTGGCTTTCTCTTTTTGCCTGAAAGCCCTCGATGGCTTATTCAGAAAGGA
CAGACTCAGAAGGCCCGTAGAATTTTATCTCAGATGCGTGGTAACCAGACCATTGATGAGGAATATGATAGCATCAAAAACAACATTGAA
GAGGAGGAAAAAGAGGTTGGCTCAGGAGTCCAACCTATACCTTCTCAGGGAGGCAAACTAGAAATAGCTGGCACTGTGGTTGGCCATTGG
GCTGGGAGCAGGCGGGGCCGTGGGGGCCGGGGGCCTTTCCCCCTGCAGGTGGTTTCTGTCGGAGGACCAGCTAGAGGGCGTCCAAGAGGA
GTTATTTCCACCCCAGTGATTAGAACATTTGGAAGAGGTGGAAGGTACTATGGCAGAGGTTACAAAAACCAGGCAGCAATTCAGGGCAGA
CCTCCTTATGCTGCTTCAGCAGAAGAAGTGGCCAAAGAACTTAAGTCAAAATCTGGGGAATCGAAGTCCTCTGCTATGTCTTCAGACGGG
TCCCTGGCTGAAAACGGAGTGATGGCCGAGGAGAAGCCGGCTCCCCAGATGAACGGGAGCACGGGTGACGCCAGGGCCCCCAGCCACTCT
GAAAGTGCCTTGAATAATGACTCTAAAACGTGCAATACAAATCCTCATTTAAATGCACTAAGTACAGACAGCGCTTGCCGCAGAGAAGCT

>In-frame_SLC2A13_ENST00000380858_chr12_40422103_-_FAM120A_ENST00000277165_chr9_96323391_+_1476nt
ATGTCCCGCAAGGCAAGCGAGAATGTGGAGTACACGCTGCGGAGCCTGAGCAGCCTGATGGGCGAGCGGCGCAGGAAGCAGCCGGAGCCG
GACGCGGCGAGCGCGGCCGGGGAGTGCAGCCTCCTGGCTGCCGCCGAATCGAGCACCAGCCTGCAGAGCGCGGGCGCGGGCGGCGGCGGC
GTCGGGGACCTGGAGCGCGCGGCGCGGCGGCAGTTCCAGCAGGACGAGACCCCCGCCTTCGTGTACGTGGTGGCCGTCTTCTCCGCGCTG
GGCGGCTTCCTGTTTGGCTATGACACCGGGGTGGTGTCAGGGGCCATGCTGCTGCTCAAGCGGCAGCTCAGTCTGGACGCGCTGTGGCAG
GAGCTGCTGGTGTCCAGCACGGTGGGGGCGGCTGCCGTCTCGGCGCTGGCCGGAGGCGCCCTCAACGGCGTCTTCGGCCGCCGCGCTGCC
ATCCTCCTGGCCAGTGCCCTCTTCACCGCCGGCTCCGCGGTGCTGGCTGCGGCCAACAACAAGGAGACACTGCTCGCCGGCCGCCTGGTC
GTGGGACTCGGCATCGGCATTGCTTCTATGACAGTGCCAGTGTACATTGCGGAGGTCTCACCACCCAATTTAAGAGGCCGATTAGTCACC
ATTAATACCCTCTTCATCACAGGAGGGCAGTTCTTTGCAAGTGTTGTTGATGGAGCCTTCAGTTATCTCCAGAAGGATGGATGGAGGTAC
ATGTTGGGACTTGCAGCAGTTCCGGCGGTTATACAGTTTTTTGGCTTTCTCTTTTTGCCTGAAAGCCCTCGATGGCTTATTCAGAAAGGA
CAGACTCAGAAGGCCCGTAGAATTTTATCTCAGATGCGTGGTAACCAGACCATTGATGAGGAATATGATAGCATCAAAAACAACATTGAA
GAGGAGGAAAAAGAGGTTGGCTCAGGAGTCCAACCTATACCTTCTCAGGGAGGCAAACTAGAAATAGCTGGCACTGTGGTTGGCCATTGG
GCTGGGAGCAGGCGGGGCCGTGGGGGCCGGGGGCCTTTCCCCCTGCAGGTGGTTTCTGTCGGAGGACCAGCTAGAGGGCGTCCAAGAGGA
GTTATTTCCACCCCAGTGATTAGAACATTTGGAAGAGGTGGAAGGTACTATGGCAGAGGTTACAAAAACCAGGCAGCAATTCAGGGCAGA
CCTCCTTATGCTGCTTCAGCAGAAGAAGTGGCCAAAGAACTTAAGTCAAAATCTGGGGAATCGAAGTCCTCTGCTATGTCTTCAGACGGG
TCCCTGGCTGAAAACGGAGTGATGGCCGAGGAGAAGCCGGCTCCCCAGATGAACGGGAGCACGGGTGACGCCAGGGCCCCCAGCCACTCT
GAAAGTGCCTTGAATAATGACTCTAAAACGTGCAATACAAATCCTCATTTAAATGCACTAAGTACAGACAGCGCTTGCCGCAGAGAAGCT


* Fusion transcript sequences (Full-length transcript).
>In-frame_SLC2A13_ENST00000280871_chr12_40422103_-_FAM120A_ENST00000277165_chr9_96323391_+_3094nt
CTGCCGGCCCGCGGAGCCGCGTCCCCCCGGGCAGCCCCGGGCCCCTGCCCTATGTCCCGCAAGGCAAGCGAGAATGTGGAGTACACGCTG
CGGAGCCTGAGCAGCCTGATGGGCGAGCGGCGCAGGAAGCAGCCGGAGCCGGACGCGGCGAGCGCGGCCGGGGAGTGCAGCCTCCTGGCT
GCCGCCGAATCGAGCACCAGCCTGCAGAGCGCGGGCGCGGGCGGCGGCGGCGTCGGGGACCTGGAGCGCGCGGCGCGGCGGCAGTTCCAG
CAGGACGAGACCCCCGCCTTCGTGTACGTGGTGGCCGTCTTCTCCGCGCTGGGCGGCTTCCTGTTTGGCTATGACACCGGGGTGGTGTCA
GGGGCCATGCTGCTGCTCAAGCGGCAGCTCAGTCTGGACGCGCTGTGGCAGGAGCTGCTGGTGTCCAGCACGGTGGGGGCGGCTGCCGTC
TCGGCGCTGGCCGGAGGCGCCCTCAACGGCGTCTTCGGCCGCCGCGCTGCCATCCTCCTGGCCAGTGCCCTCTTCACCGCCGGCTCCGCG
GTGCTGGCTGCGGCCAACAACAAGGAGACACTGCTCGCCGGCCGCCTGGTCGTGGGACTCGGCATCGGCATTGCTTCTATGACAGTGCCA
GTGTACATTGCGGAGGTCTCACCACCCAATTTAAGAGGCCGATTAGTCACCATTAATACCCTCTTCATCACAGGAGGGCAGTTCTTTGCA
AGTGTTGTTGATGGAGCCTTCAGTTATCTCCAGAAGGATGGATGGAGGTACATGTTGGGACTTGCAGCAGTTCCGGCGGTTATACAGTTT
TTTGGCTTTCTCTTTTTGCCTGAAAGCCCTCGATGGCTTATTCAGAAAGGACAGACTCAGAAGGCCCGTAGAATTTTATCTCAGATGCGT
GGTAACCAGACCATTGATGAGGAATATGATAGCATCAAAAACAACATTGAAGAGGAGGAAAAAGAGGTTGGCTCAGGAGTCCAACCTATA
CCTTCTCAGGGAGGCAAACTAGAAATAGCTGGCACTGTGGTTGGCCATTGGGCTGGGAGCAGGCGGGGCCGTGGGGGCCGGGGGCCTTTC
CCCCTGCAGGTGGTTTCTGTCGGAGGACCAGCTAGAGGGCGTCCAAGAGGAGTTATTTCCACCCCAGTGATTAGAACATTTGGAAGAGGT
GGAAGGTACTATGGCAGAGGTTACAAAAACCAGGCAGCAATTCAGGGCAGACCTCCTTATGCTGCTTCAGCAGAAGAAGTGGCCAAAGAA
CTTAAGTCAAAATCTGGGGAATCGAAGTCCTCTGCTATGTCTTCAGACGGGTCCCTGGCTGAAAACGGAGTGATGGCCGAGGAGAAGCCG
GCTCCCCAGATGAACGGGAGCACGGGTGACGCCAGGGCCCCCAGCCACTCTGAAAGTGCCTTGAATAATGACTCTAAAACGTGCAATACA
AATCCTCATTTAAATGCACTAAGTACAGACAGCGCTTGCCGCAGAGAAGCTGCTCTGGAGGCAGCTGTCTTAAATAAAGAAGAGTAAACT
TATTTTTTATAGAGGGTGAAGGATGCTGGAAGGGTAAGGATTTAGGAATATCTGGAGAGAAAGAGAGCCTGCAGTTATGTACATTTTGTC
CTTTCCGTAAGAGAAAAATGAGGACTTTGGAAATTCAGATCCCTCTTTGATATCAGAGATTTAAACAACACATTTTTAGTTTTAACCAGT
TGTAGTCAAAATGCTACAATAAAACAAAAAAGAGAAAGAAAATGAAGAGCATTTGACTCCCGCACTTAAAATGAAGTACACATAAAGTTT
AAACTGGTTATGACAAAAGCCTTTAGTTGTGTTTCTTGAACTATAAAGAAAACAAATTTTGGCAGTCTTTAAGTATATATAGCTTAAAAT
ATAATTTTTAGCATTTGGCACCATATGTATGCCATTATATTTGATTTTGCATTACTGTTTCACAATGAAGCTTTCTTTAAGGCTTTGATT
TTTATGATTATGAAAGAAATAAGGCACAACCACAGTTTTTCTTTCTTAAATTTCATCACTGTTGATGTGGTTCTTTTGTGTTAAAAAAAA
AAAGTGCAACTATCAAAACTAAAAAATTATAGAGTAATATTGCCGTTCTGCTGATTTTAAATATACAATACATCATACATACTTTACAAG
CAAGTTAAATGGAGATAAAGTTGAAATCATAGAAGATGCAAATGACCTTTCAAAATCAACACAATGTGTTCTGAAACTTTCGTGACTAAT
ACCATGCATCTGTGATCAATGAACTATGTGGTTTTGAATCGGATGTAGACCATTAGTACTACTACTTGAGCTAAACTTCTGCATGGTTCA
TAATTTTTAAAGTGTGTAGTTAATATGCATGTTATCGTCCTTTCTTCCATTCTTAACAGTATGTGCCCATTTGCAAAACAAAAATGCTAA
TAATCAGTAATAGTCCTATAAAAGATGTTAACTCTGTTTAGTCATTGACTGATCTTGCTCTAACCTTAAAATTTTGTGATTATTGACCTC
TGTTGCATTTATTCTAAAGCCCCCCAAAAATTATCTAGCCGTTTCGAATATCAACATTACCCTGGTGTATTCACTGCTGTATGCATTATT
GTTCTTTGTTGCTGTTTTATGCCTTCATATTAGCAAATATGAAATTCTGTGAAAAAAAACCCTTTGATCTTAAAAAAAAAAAAACCACCC
CCCCCTTCTGTAGCAGGAAACAAATTGCTTGTTCTTGAGAACTTTCCCATCAAGAATTTAGTAGAAGCAGGTATACTTCTATCATTTTGA
TGTTTTTGTTAATGTTTCCAAACAATGTACTTTGAAATCAGAATCACTTCTTATCGTTTTCATATACTTCTGATGCTCTTCATCACATTA
GTGATCAGAAATGAGGTGTAATTCCCCAACCCCTGCCCGCAAGAGCTAAGTAGGATCTTACTGTAAGTTGAAGGGAGTTTTGCCCTAACT
CATGGATTGTGCAAGAATGAACTGCTGTTGGGTTTGATTGACTGTCGATGGATTGTGGTGTGGTGTATCTGAAGGCTATTGAATGCAACT

>In-frame_SLC2A13_ENST00000380858_chr12_40422103_-_FAM120A_ENST00000277165_chr9_96323391_+_3324nt
CGCCTCCCGCCCGCTCCGCAGCGCCAGCTCGGCAGGCGCGGGGCGTGAGTGTGGAGTGAGACCCGCCGGGCTCCAACTCCGCAGCGTCGG
AGCGCGGCGGGCAGCAACTTTCTCCCCGGAGCGGCCGTGGCGGCGGCTGCTGCCGTGGCAGCCGGAGCGGAAGCCGGGAGGAAGAAAGCG
GCGGCAGCGGCGGTTGCTCCCGCCGGCTCGGGCTGTCTAGCTCGCCGAGACTGCCGGCCCGCGGAGCCGCGTCCCCCCGGGCAGCCCCGG
GCCCCTGCCCTATGTCCCGCAAGGCAAGCGAGAATGTGGAGTACACGCTGCGGAGCCTGAGCAGCCTGATGGGCGAGCGGCGCAGGAAGC
AGCCGGAGCCGGACGCGGCGAGCGCGGCCGGGGAGTGCAGCCTCCTGGCTGCCGCCGAATCGAGCACCAGCCTGCAGAGCGCGGGCGCGG
GCGGCGGCGGCGTCGGGGACCTGGAGCGCGCGGCGCGGCGGCAGTTCCAGCAGGACGAGACCCCCGCCTTCGTGTACGTGGTGGCCGTCT
TCTCCGCGCTGGGCGGCTTCCTGTTTGGCTATGACACCGGGGTGGTGTCAGGGGCCATGCTGCTGCTCAAGCGGCAGCTCAGTCTGGACG
CGCTGTGGCAGGAGCTGCTGGTGTCCAGCACGGTGGGGGCGGCTGCCGTCTCGGCGCTGGCCGGAGGCGCCCTCAACGGCGTCTTCGGCC
GCCGCGCTGCCATCCTCCTGGCCAGTGCCCTCTTCACCGCCGGCTCCGCGGTGCTGGCTGCGGCCAACAACAAGGAGACACTGCTCGCCG
GCCGCCTGGTCGTGGGACTCGGCATCGGCATTGCTTCTATGACAGTGCCAGTGTACATTGCGGAGGTCTCACCACCCAATTTAAGAGGCC
GATTAGTCACCATTAATACCCTCTTCATCACAGGAGGGCAGTTCTTTGCAAGTGTTGTTGATGGAGCCTTCAGTTATCTCCAGAAGGATG
GATGGAGGTACATGTTGGGACTTGCAGCAGTTCCGGCGGTTATACAGTTTTTTGGCTTTCTCTTTTTGCCTGAAAGCCCTCGATGGCTTA
TTCAGAAAGGACAGACTCAGAAGGCCCGTAGAATTTTATCTCAGATGCGTGGTAACCAGACCATTGATGAGGAATATGATAGCATCAAAA
ACAACATTGAAGAGGAGGAAAAAGAGGTTGGCTCAGGAGTCCAACCTATACCTTCTCAGGGAGGCAAACTAGAAATAGCTGGCACTGTGG
TTGGCCATTGGGCTGGGAGCAGGCGGGGCCGTGGGGGCCGGGGGCCTTTCCCCCTGCAGGTGGTTTCTGTCGGAGGACCAGCTAGAGGGC
GTCCAAGAGGAGTTATTTCCACCCCAGTGATTAGAACATTTGGAAGAGGTGGAAGGTACTATGGCAGAGGTTACAAAAACCAGGCAGCAA
TTCAGGGCAGACCTCCTTATGCTGCTTCAGCAGAAGAAGTGGCCAAAGAACTTAAGTCAAAATCTGGGGAATCGAAGTCCTCTGCTATGT
CTTCAGACGGGTCCCTGGCTGAAAACGGAGTGATGGCCGAGGAGAAGCCGGCTCCCCAGATGAACGGGAGCACGGGTGACGCCAGGGCCC
CCAGCCACTCTGAAAGTGCCTTGAATAATGACTCTAAAACGTGCAATACAAATCCTCATTTAAATGCACTAAGTACAGACAGCGCTTGCC
GCAGAGAAGCTGCTCTGGAGGCAGCTGTCTTAAATAAAGAAGAGTAAACTTATTTTTTATAGAGGGTGAAGGATGCTGGAAGGGTAAGGA
TTTAGGAATATCTGGAGAGAAAGAGAGCCTGCAGTTATGTACATTTTGTCCTTTCCGTAAGAGAAAAATGAGGACTTTGGAAATTCAGAT
CCCTCTTTGATATCAGAGATTTAAACAACACATTTTTAGTTTTAACCAGTTGTAGTCAAAATGCTACAATAAAACAAAAAAGAGAAAGAA
AATGAAGAGCATTTGACTCCCGCACTTAAAATGAAGTACACATAAAGTTTAAACTGGTTATGACAAAAGCCTTTAGTTGTGTTTCTTGAA
CTATAAAGAAAACAAATTTTGGCAGTCTTTAAGTATATATAGCTTAAAATATAATTTTTAGCATTTGGCACCATATGTATGCCATTATAT
TTGATTTTGCATTACTGTTTCACAATGAAGCTTTCTTTAAGGCTTTGATTTTTATGATTATGAAAGAAATAAGGCACAACCACAGTTTTT
CTTTCTTAAATTTCATCACTGTTGATGTGGTTCTTTTGTGTTAAAAAAAAAAAGTGCAACTATCAAAACTAAAAAATTATAGAGTAATAT
TGCCGTTCTGCTGATTTTAAATATACAATACATCATACATACTTTACAAGCAAGTTAAATGGAGATAAAGTTGAAATCATAGAAGATGCA
AATGACCTTTCAAAATCAACACAATGTGTTCTGAAACTTTCGTGACTAATACCATGCATCTGTGATCAATGAACTATGTGGTTTTGAATC
GGATGTAGACCATTAGTACTACTACTTGAGCTAAACTTCTGCATGGTTCATAATTTTTAAAGTGTGTAGTTAATATGCATGTTATCGTCC
TTTCTTCCATTCTTAACAGTATGTGCCCATTTGCAAAACAAAAATGCTAATAATCAGTAATAGTCCTATAAAAGATGTTAACTCTGTTTA
GTCATTGACTGATCTTGCTCTAACCTTAAAATTTTGTGATTATTGACCTCTGTTGCATTTATTCTAAAGCCCCCCAAAAATTATCTAGCC
GTTTCGAATATCAACATTACCCTGGTGTATTCACTGCTGTATGCATTATTGTTCTTTGTTGCTGTTTTATGCCTTCATATTAGCAAATAT
GAAATTCTGTGAAAAAAAACCCTTTGATCTTAAAAAAAAAAAAACCACCCCCCCCTTCTGTAGCAGGAAACAAATTGCTTGTTCTTGAGA
ACTTTCCCATCAAGAATTTAGTAGAAGCAGGTATACTTCTATCATTTTGATGTTTTTGTTAATGTTTCCAAACAATGTACTTTGAAATCA
GAATCACTTCTTATCGTTTTCATATACTTCTGATGCTCTTCATCACATTAGTGATCAGAAATGAGGTGTAATTCCCCAACCCCTGCCCGC
AAGAGCTAAGTAGGATCTTACTGTAAGTTGAAGGGAGTTTTGCCCTAACTCATGGATTGTGCAAGAATGAACTGCTGTTGGGTTTGATTG


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FusionGenePPI for SLC2A13_FAM120A


check button Go to ChiPPI (Chimeric Protein-Protein interactions) to see the chimeric PPI interaction in

ChiPPI page

.

check button Protein-protein interactors with each fusion partner protein in wild-type (BIOGRID-3.4.160)
HgeneHgene's interactorsTgeneTgene's interactors
SLC2A13FAM120ASIRT7, CUL3, CAND1, GRK5, CFTR, TARDBP, HECW2, PASK, STAU1, SPRTN, CEP250, NXF1, EZH2, RNF2, BMI1, FBXW11, EFNB2, GGPS1, HNRNPA1, PRMT8, ILF2, RBMX, SPACA4, IFI30, NTRK1, SSX2IP, HNRNPD, HNRNPH2, HNRNPU, MATR3, SEC16A, SYNCRIP, MRPL50, ATL2, FOXK2, FOXQ1, ZNF746, ELAVL2, SSSCA1, BCHE, APOBEC3D, LGALS3BP, GSPT2, CSN1S1, RBM42, CDX1, RBM3, TRIM25, G3BP1, BRCA1, YAP1


check button - Retained PPIs in in-frame fusion.
PartnerGeneHbpTbpENSTStrandBPexonTotalExonProtein feature loci*BPlociTotalLenStill interaction with
TgeneFAM120Achr12:40422103chr9:96323391ENST00000375389+09339_405-9629YES1%2C SRC and FYN


check button - Lost PPIs in in-frame fusion.
PartnerGeneHbpTbpENSTStrandBPexonTotalExonProtein feature loci*BPlociTotalLenInteraction lost with
TgeneFAM120Achr12:40422103chr9:96323391ENST00000277165+1418339_4059351119YES1%2C SRC and FYN
TgeneFAM120Achr12:40422103chr9:96323391ENST00000333936+1519339_4059631147YES1%2C SRC and FYN
TgeneFAM120Achr12:40422103chr9:96323391ENST00000340893+1317339_4058891073YES1%2C SRC and FYN


check button - Retained PPIs, but lost function due to frame-shift fusion.
PartnerGeneHbpTbpENSTStrandBPexonTotalExonProtein feature loci*BPlociTotalLenInteraction lost with


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RelatedDrugs for SLC2A13_FAM120A


check button Drugs targeting genes involved in this fusion gene.
(DrugBank Version 5.1.0 2018-04-02)
PartnerGeneUniProtAccDrugBank IDDrug nameDrug activityDrug typeDrug status

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RelatedDiseases for SLC2A13_FAM120A


check button Diseases associated with fusion partners.
(DisGeNet 4.0)
PartnerGeneDisease IDDisease name# pubmedsSource
HgeneSLC2A13C0236969Substance-Related Disorders1CTD_human