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Fusion gene ID: 34294 |
FusionGeneSummary for SLC2A12_SGK1 |
Fusion gene summary |
Fusion gene information | Fusion gene name: SLC2A12_SGK1 | Fusion gene ID: 34294 | Hgene | Tgene | Gene symbol | SLC2A12 | SGK1 | Gene ID | 154091 | 6446 |
Gene name | solute carrier family 2 member 12 | serum/glucocorticoid regulated kinase 1 | |
Synonyms | GLUT12|GLUT8 | SGK | |
Cytomap | 6q23.2 | 6q23.2 | |
Type of gene | protein-coding | protein-coding | |
Description | solute carrier family 2, facilitated glucose transporter member 12GLUT-12glucose transporter type 12solute carrier family 2 (facilitated glucose transporter), member 12 | serine/threonine-protein kinase Sgk1Sgk1 variant i3serine/threonine protein kinase SGK | |
Modification date | 20180523 | 20180523 | |
UniProtAcc | Q8TD20 | O00141 | |
Ensembl transtripts involved in fusion gene | ENST00000275230, | ENST00000367858, ENST00000524929, ENST00000413996, ENST00000237305, ENST00000367857, ENST00000528577, ENST00000475719, ENST00000489458, | |
Fusion gene scores | * DoF score | 3 X 3 X 4=36 | 7 X 7 X 5=245 |
# samples | 4 | 9 | |
** MAII score | log2(4/36*10)=0.15200309344505 effective Gene in Pan-Cancer Fusion Genes (eGinPCFGs). DoF>8 and MAII>0 | log2(9/245*10)=-1.4447848426729 possibly effective Gene in Pan-Cancer Fusion Genes (peGinPCFGs). DoF>8 and MAII<0 | |
Context | PubMed: SLC2A12 [Title/Abstract] AND SGK1 [Title/Abstract] AND fusion [Title/Abstract] | ||
Functional or gene categories assigned by FusionGDB annotation | Oncogene involved fusion gene, in-frame and retained their domain. Kinase involved fusion gene, inframe and retained kinase domain. |
* DoF score (Degree of Frequency) = # partners X # break points X # cancer types ** MAII score (Major Active Isofusion Index) = log2(# samples/DoF score*10) |
Gene ontology of each fusion partner gene with evidence of Inferred from Direct Assay (IDA) from Entrez |
Partner | Gene | GO ID | GO term | PubMed ID |
Fusion gene information from three resources (ChiTars (NAR, 2018), tumorfusions (NAR, 2018), Gao et al. (Cell, 2018)) * All genome coordinats were lifted-over on hg19. * Click on the break point to see the gene structure around the break point region using the UCSC Genome Browser. |
Data type | Source | Cancer type | Sample | Hgene | Hchr | Hbp | Hstrand | Tgene | Tchr | Tbp | Tstrand |
TCGA | RV | HNSC | TCGA-BA-4078-01A | SLC2A12 | chr6 | 134373516 | - | SGK1 | chr6 | 134583286 | - |
TCGA | RV | UCEC | TCGA-BK-A139-01A | SLC2A12 | chr6 | 134349519 | - | SGK1 | chr6 | 134583286 | - |
* LD: Li Ding group's fusion gene list RV: Roel Verhaak group's fusion gene list ChiTaRs fusion database |
Open reading frame (ORF) analsis of fusion genes based on Ensembl gene isoform structure. * Click on the break point to see the gene structure around the break point region using the UCSC Genome Browser. |
ORF | Henst | Tenst | Hgene | Hchr | Hbp | Hstrand | Tgene | Tchr | Tbp | Tstrand |
In-frame | ENST00000275230 | ENST00000367858 | SLC2A12 | chr6 | 134373516 | - | SGK1 | chr6 | 134583286 | - |
Frame-shift | ENST00000275230 | ENST00000524929 | SLC2A12 | chr6 | 134373516 | - | SGK1 | chr6 | 134583286 | - |
5CDS-intron | ENST00000275230 | ENST00000413996 | SLC2A12 | chr6 | 134373516 | - | SGK1 | chr6 | 134583286 | - |
5CDS-intron | ENST00000275230 | ENST00000237305 | SLC2A12 | chr6 | 134373516 | - | SGK1 | chr6 | 134583286 | - |
5CDS-intron | ENST00000275230 | ENST00000367857 | SLC2A12 | chr6 | 134373516 | - | SGK1 | chr6 | 134583286 | - |
5CDS-intron | ENST00000275230 | ENST00000528577 | SLC2A12 | chr6 | 134373516 | - | SGK1 | chr6 | 134583286 | - |
5CDS-intron | ENST00000275230 | ENST00000475719 | SLC2A12 | chr6 | 134373516 | - | SGK1 | chr6 | 134583286 | - |
5CDS-intron | ENST00000275230 | ENST00000489458 | SLC2A12 | chr6 | 134373516 | - | SGK1 | chr6 | 134583286 | - |
Frame-shift | ENST00000275230 | ENST00000367858 | SLC2A12 | chr6 | 134349519 | - | SGK1 | chr6 | 134583286 | - |
In-frame | ENST00000275230 | ENST00000524929 | SLC2A12 | chr6 | 134349519 | - | SGK1 | chr6 | 134583286 | - |
5CDS-intron | ENST00000275230 | ENST00000413996 | SLC2A12 | chr6 | 134349519 | - | SGK1 | chr6 | 134583286 | - |
5CDS-intron | ENST00000275230 | ENST00000237305 | SLC2A12 | chr6 | 134349519 | - | SGK1 | chr6 | 134583286 | - |
5CDS-intron | ENST00000275230 | ENST00000367857 | SLC2A12 | chr6 | 134349519 | - | SGK1 | chr6 | 134583286 | - |
5CDS-intron | ENST00000275230 | ENST00000528577 | SLC2A12 | chr6 | 134349519 | - | SGK1 | chr6 | 134583286 | - |
5CDS-intron | ENST00000275230 | ENST00000475719 | SLC2A12 | chr6 | 134349519 | - | SGK1 | chr6 | 134583286 | - |
5CDS-intron | ENST00000275230 | ENST00000489458 | SLC2A12 | chr6 | 134349519 | - | SGK1 | chr6 | 134583286 | - |
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FusionProtFeatures for SLC2A12_SGK1 |
Main function of each fusion partner protein. (from UniProt) |
Hgene | Tgene |
SLC2A12 | SGK1 |
Facilitative glucose transporter. {ECO:0000250}. |
Retention analysis result of each fusion partner protein across 39 protein features of UniProt such as six molecule processing features, 13 region features, four site features, six amino acid modification features, two natural variation features, five experimental info features, and 3 secondary structure features. Here, because of limited space for viewing, we only show the protein feature retention information belong to the 13 regional features. All retention annotation result can be downloaded at . * Minus value of BPloci means that the break pointn is located before the CDS. |
- In-frame and retained protein feature among the 13 regional features. |
Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Protein feature | Protein feature note |
Tgene | >SGK1 | chr6:134373516 | chr6:134583286 | ENST00000237305 | - | 0 | 12 | 131_141 | -30 | 432 | Compositional bias | Note=Glu/Lys-rich |
Tgene | >SGK1 | chr6:134373516 | chr6:134583286 | ENST00000367857 | - | 0 | 11 | 131_141 | -78 | 422 | Compositional bias | Note=Glu/Lys-rich |
Tgene | >SGK1 | chr6:134373516 | chr6:134583286 | ENST00000367858 | - | 0 | 14 | 131_141 | 23 | 527 | Compositional bias | Note=Glu/Lys-rich |
Tgene | >SGK1 | chr6:134373516 | chr6:134583286 | ENST00000413996 | - | 0 | 12 | 131_141 | -110 | 446 | Compositional bias | Note=Glu/Lys-rich |
Tgene | >SGK1 | chr6:134373516 | chr6:134583286 | ENST00000528577 | - | 0 | 12 | 131_141 | -28 | 460 | Compositional bias | Note=Glu/Lys-rich |
Tgene | >SGK1 | chr6:134373516 | chr6:134583286 | ENST00000237305 | - | 0 | 12 | 356_431 | -30 | 432 | Domain | Note=AGC-kinase C-terminal |
Tgene | >SGK1 | chr6:134373516 | chr6:134583286 | ENST00000237305 | - | 0 | 12 | 98_355 | -30 | 432 | Domain | Protein kinase |
Tgene | >SGK1 | chr6:134373516 | chr6:134583286 | ENST00000367857 | - | 0 | 11 | 356_431 | -78 | 422 | Domain | Note=AGC-kinase C-terminal |
Tgene | >SGK1 | chr6:134373516 | chr6:134583286 | ENST00000367857 | - | 0 | 11 | 98_355 | -78 | 422 | Domain | Protein kinase |
Tgene | >SGK1 | chr6:134373516 | chr6:134583286 | ENST00000367858 | - | 0 | 14 | 356_431 | 23 | 527 | Domain | Note=AGC-kinase C-terminal |
Tgene | >SGK1 | chr6:134373516 | chr6:134583286 | ENST00000367858 | - | 0 | 14 | 98_355 | 23 | 527 | Domain | Protein kinase |
Tgene | >SGK1 | chr6:134373516 | chr6:134583286 | ENST00000413996 | - | 0 | 12 | 356_431 | -110 | 446 | Domain | Note=AGC-kinase C-terminal |
Tgene | >SGK1 | chr6:134373516 | chr6:134583286 | ENST00000413996 | - | 0 | 12 | 98_355 | -110 | 446 | Domain | Protein kinase |
Tgene | >SGK1 | chr6:134373516 | chr6:134583286 | ENST00000528577 | - | 0 | 12 | 356_431 | -28 | 460 | Domain | Note=AGC-kinase C-terminal |
Tgene | >SGK1 | chr6:134373516 | chr6:134583286 | ENST00000528577 | - | 0 | 12 | 98_355 | -28 | 460 | Domain | Protein kinase |
Tgene | >SGK1 | chr6:134373516 | chr6:134583286 | ENST00000237305 | - | 0 | 12 | 104_112 | -30 | 432 | Nucleotide binding | Note=ATP |
Tgene | >SGK1 | chr6:134373516 | chr6:134583286 | ENST00000367857 | - | 0 | 11 | 104_112 | -78 | 422 | Nucleotide binding | Note=ATP |
Tgene | >SGK1 | chr6:134373516 | chr6:134583286 | ENST00000367858 | - | 0 | 14 | 104_112 | 23 | 527 | Nucleotide binding | Note=ATP |
Tgene | >SGK1 | chr6:134373516 | chr6:134583286 | ENST00000413996 | - | 0 | 12 | 104_112 | -110 | 446 | Nucleotide binding | Note=ATP |
Tgene | >SGK1 | chr6:134373516 | chr6:134583286 | ENST00000528577 | - | 0 | 12 | 104_112 | -28 | 460 | Nucleotide binding | Note=ATP |
Tgene | >SGK1 | chr6:134373516 | chr6:134583286 | ENST00000237305 | - | 0 | 12 | 1_60 | -30 | 432 | Region | Note=Necessary for localization to the mitochondria |
Tgene | >SGK1 | chr6:134373516 | chr6:134583286 | ENST00000367857 | - | 0 | 11 | 1_60 | -78 | 422 | Region | Note=Necessary for localization to the mitochondria |
Tgene | >SGK1 | chr6:134373516 | chr6:134583286 | ENST00000413996 | - | 0 | 12 | 1_60 | -110 | 446 | Region | Note=Necessary for localization to the mitochondria |
Tgene | >SGK1 | chr6:134373516 | chr6:134583286 | ENST00000528577 | - | 0 | 12 | 1_60 | -28 | 460 | Region | Note=Necessary for localization to the mitochondria |
- In-frame and not-retained protein feature among the 13 regional features. |
Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Protein feature | Protein feature note |
Hgene | >SLC2A12 | chr6:134373516 | chr6:134583286 | ENST00000275230 | - | 1 | 5 | 102_115 | 34 | 618 | Topological domain | Cytoplasmic |
Hgene | >SLC2A12 | chr6:134373516 | chr6:134583286 | ENST00000275230 | - | 1 | 5 | 137_137 | 34 | 618 | Topological domain | Extracellular |
Hgene | >SLC2A12 | chr6:134373516 | chr6:134583286 | ENST00000275230 | - | 1 | 5 | 159_172 | 34 | 618 | Topological domain | Cytoplasmic |
Hgene | >SLC2A12 | chr6:134373516 | chr6:134583286 | ENST00000275230 | - | 1 | 5 | 194_197 | 34 | 618 | Topological domain | Extracellular |
Hgene | >SLC2A12 | chr6:134373516 | chr6:134583286 | ENST00000275230 | - | 1 | 5 | 1_44 | 34 | 618 | Topological domain | Cytoplasmic |
Hgene | >SLC2A12 | chr6:134373516 | chr6:134583286 | ENST00000275230 | - | 1 | 5 | 219_278 | 34 | 618 | Topological domain | Cytoplasmic |
Hgene | >SLC2A12 | chr6:134373516 | chr6:134583286 | ENST00000275230 | - | 1 | 5 | 300_317 | 34 | 618 | Topological domain | Extracellular |
Hgene | >SLC2A12 | chr6:134373516 | chr6:134583286 | ENST00000275230 | - | 1 | 5 | 339_345 | 34 | 618 | Topological domain | Cytoplasmic |
Hgene | >SLC2A12 | chr6:134373516 | chr6:134583286 | ENST00000275230 | - | 1 | 5 | 367_466 | 34 | 618 | Topological domain | Extracellular |
Hgene | >SLC2A12 | chr6:134373516 | chr6:134583286 | ENST00000275230 | - | 1 | 5 | 488_498 | 34 | 618 | Topological domain | Cytoplasmic |
Hgene | >SLC2A12 | chr6:134373516 | chr6:134583286 | ENST00000275230 | - | 1 | 5 | 520_528 | 34 | 618 | Topological domain | Extracellular |
Hgene | >SLC2A12 | chr6:134373516 | chr6:134583286 | ENST00000275230 | - | 1 | 5 | 550_617 | 34 | 618 | Topological domain | Cytoplasmic |
Hgene | >SLC2A12 | chr6:134373516 | chr6:134583286 | ENST00000275230 | - | 1 | 5 | 66_80 | 34 | 618 | Topological domain | Extracellular |
Hgene | >SLC2A12 | chr6:134373516 | chr6:134583286 | ENST00000275230 | - | 1 | 5 | 116_136 | 34 | 618 | Transmembrane | Helical |
Hgene | >SLC2A12 | chr6:134373516 | chr6:134583286 | ENST00000275230 | - | 1 | 5 | 138_158 | 34 | 618 | Transmembrane | Helical |
Hgene | >SLC2A12 | chr6:134373516 | chr6:134583286 | ENST00000275230 | - | 1 | 5 | 173_193 | 34 | 618 | Transmembrane | Helical |
Hgene | >SLC2A12 | chr6:134373516 | chr6:134583286 | ENST00000275230 | - | 1 | 5 | 198_218 | 34 | 618 | Transmembrane | Helical |
Hgene | >SLC2A12 | chr6:134373516 | chr6:134583286 | ENST00000275230 | - | 1 | 5 | 279_299 | 34 | 618 | Transmembrane | Helical |
Hgene | >SLC2A12 | chr6:134373516 | chr6:134583286 | ENST00000275230 | - | 1 | 5 | 318_338 | 34 | 618 | Transmembrane | Helical |
Hgene | >SLC2A12 | chr6:134373516 | chr6:134583286 | ENST00000275230 | - | 1 | 5 | 346_366 | 34 | 618 | Transmembrane | Helical |
Hgene | >SLC2A12 | chr6:134373516 | chr6:134583286 | ENST00000275230 | - | 1 | 5 | 45_65 | 34 | 618 | Transmembrane | Helical |
Hgene | >SLC2A12 | chr6:134373516 | chr6:134583286 | ENST00000275230 | - | 1 | 5 | 467_487 | 34 | 618 | Transmembrane | Helical |
Hgene | >SLC2A12 | chr6:134373516 | chr6:134583286 | ENST00000275230 | - | 1 | 5 | 499_519 | 34 | 618 | Transmembrane | Helical |
Hgene | >SLC2A12 | chr6:134373516 | chr6:134583286 | ENST00000275230 | - | 1 | 5 | 529_549 | 34 | 618 | Transmembrane | Helical |
Hgene | >SLC2A12 | chr6:134373516 | chr6:134583286 | ENST00000275230 | - | 1 | 5 | 81_101 | 34 | 618 | Transmembrane | Helical |
Tgene | SGK1 | chr6:134373516 | chr6:134583286 | ENST00000367858 | - | 0 | 14 | 1_60 | 23 | 527 | Region | Note=Necessary for localization to the mitochondria |
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FusionGeneSequence for SLC2A12_SGK1 |
For in-frame fusion transcripts, we provide the fusion transcript sequences and fusion amino acid sequences. (nt: nucleotides, aa: amino acids) |
* Fusion amino acid sequences. |
>In-frame_SLC2A12_ENST00000275230_chr6_134373516_-_SGK1_ENST00000367858_chr6_134583286_-_538aa MVPVENTEGPSLLNQKGTAVETEGSGSRHPPWARGTKVDQEPNGQCGQASESQPEVHRLLHGAHPSRGARLRVFLVSNMPGXTCFPKRGS PSGERVMFMGNSIWVXSERAMXSCQHPDQARSKNLLDXXXSSFHEAEEDGSERLYSEDCQXLLCMQTPXSSVHLEDLPTSGAXAYECQPF SSTKSFSANQPWPVVQSSCXTIXLSLLESDRKGQFWKGSSSKTQGRRSVLCSQSFTEESNPEKERGEAYYVGAECSVEECEAPFPGGPSL LFPDCXQIVLCPRLHXWWRVVLPSPEGTLLPGTTGSFLCCXNSQCLGLPAFTEHRLXRLKTREYFARFTGTHCPYXLRTLQGEHXTQQHN IHLLWHAGVSRTXGASXAALXQDCGLVVPGSCLVXDAVWPAAFLXPKHSXNVRQHSEQASPAETKYYKFRKTPPGGPPAEGQDKAARGQG >In-frame_SLC2A12_ENST00000275230_chr6_134349519_-_SGK1_ENST00000524929_chr6_134583286_-_612aa MVPVENTEGPSLLNQKGTAVETEGSGSRHPPWARGCGMFTFLSSVTAAVSGLLVGYELGIISGALLQIKTLLALSCHEQEMVVSSLVIGA LLASLTGGVLIDRYGRRTAIILSSCLLGLGSLVLILSLSYTVLIVGRIAIGVSISLSSIATCVYIAEIAPQHRRGLLVSLNELMIVIGIL SAYISNYAFANVFHGWKYMFGLVIPLGVLQAIAMYFLPPSPRFLVMKGQEGAASKVLGRLRALSDTTEELTVIKSSLKDEYQYSFWDLFR SKDNMRTRIMIGLTLVFFVQITGQPNILFYASTVLKSVGFQSNEAASLASTGVGVVKVISTIPATLLVDHVGSKTFLCIGSSVMAASLVT MGIVNLNIHMNFTHICRSHNSINQSLDESVIYGPGNLSTNNNTLRDHFKGISSHSRSSLMPLRNDVDKRGETTSASLLNAGLSHTEYQIV TDPGDVPAFLKWLSLASLLVYVAAFSIGLGPSTKVDQEPNGQCGQASESQPEVHRLLHGAHPSRGARLRVFLVSNMPGXTCFPKRGSPSG |
* Fusion transcript sequences (only coding sequence (CDS) region). |
>In-frame_SLC2A12_ENST00000275230_chr6_134373516_-_SGK1_ENST00000367858_chr6_134583286_-_1615nt ATGGTACCTGTTGAAAACACCGAGGGCCCCAGTCTGCTGAACCAGAAGGGGACAGCCGTGGAGACGGAGGGCAGCGGCAGCCGGCATCCT CCCTGGGCGAGAGGTACGAAGGTGGATCAAGAGCCCAATGGTCAGTGTGGACAAGCATCAGAGTCCCAGCCTGAAGTACACCGGCTCCTC CATGGTGCACATCCCTCCAGGGGAGCCAGACTTCGAGTCTTCCTTGTGTCAAACATGCCTGGGTGAACATGCTTTCCAAAGAGGGGTTCT CCCTCAGGAGAACGAGTCATGTTCATGGGAAACTCAATCTGGGTGTGAAGTGAGAGAGCCATGTAATCATGCCAACATCCTGACCAAGCC CGATCCAAGAACCTTCTGGACTAATGATGATCCAGCTTTCATGAAGCAGAGGAGGATGGGTCTGAACGACTTTATTCAGAAGATTGCCAA TAACTCCTATGCATGCAAACACCCTGAAGTTCAGTCCATCTTGAAGATCTCCCAACCTCAGGAGCCTGAGCTTATGAATGCCAACCCTTC TCCTCCACCAAGTCCTTCTCAGCAAATCAACCTTGGCCCGTCGTCCAATCCTCATGCTAAACCATCTGACTTTCACTTCTTGAAAGTGAT CGGAAAGGGCAGTTTTGGAAAGGTTCTTCTAGCAAGACACAAGGCAGAAGAAGTGTTCTATGCAGTCAAAGTTTTACAGAAGAAAGCAAT CCTGAAAAAGAAAGAGGAGAAGCATATTATGTCGGAGCGGAATGTTCTGTTGAAGAATGTGAAGCACCCTTTCCTGGTGGGCCTTCACTT CTCTTTCCAGACTGCTGACAAATTGTACTTTGTCCTAGACTACATTAATGGTGGAGAGTTGTTCTACCATCTCCAGAGGGAACGCTGCTT CCTGGAACCACGGGCTCGTTTCTATGCTGCTGAAATAGCCAGTGCCTTGGGCTACCTGCATTCACTGAACATCGTTTATAGAGACTTAAA ACCAGAGAATATTTTGCTAGATTCACAGGGACACATTGTCCTTACTGACTTCGGACTCTGCAAGGAGAACATTGAACACAACAGCACAAC ATCCACCTTCTGTGGCACGCCGGAGTATCTCGCACCTGAGGTGCTTCATAAGCAGCCTTATGACAGGACTGTGGACTGGTGGTGCCTGGG AGCTGTCTTGTATGAGATGCTGTATGGCCTGCCGCCTTTTTATAGCCGAAACACAGCTGAAATGTACGACAACATTCTGAACAAGCCTCT CCAGCTGAAACCAAATATTACAAATTCCGCAAGACACCTCCTGGAGGGCCTCCTGCAGAAGGACAGGACAAAGCGGCTCGGGGCCAAGGA TGACTTCATGGAGATTAAGAGTCATGTCTTCTTCTCCTTAATTAACTGGGATGATCTCATTAATAAGAAGATTACTCCCCCTTTTAACCC AAATGTGAGTGGGCCCAACGACCTACGGCACTTTGACCCCGAGTTTACCGAAGAGCCTGTCCCCAACTCCATTGGCAAGTCCCCTGACAG >In-frame_SLC2A12_ENST00000275230_chr6_134349519_-_SGK1_ENST00000524929_chr6_134583286_-_1837nt ATGGTACCTGTTGAAAACACCGAGGGCCCCAGTCTGCTGAACCAGAAGGGGACAGCCGTGGAGACGGAGGGCAGCGGCAGCCGGCATCCT CCCTGGGCGAGAGGCTGCGGCATGTTTACCTTCCTGTCATCTGTCACTGCTGCTGTCAGTGGCCTCCTGGTGGGTTATGAACTTGGGATC ATCTCTGGGGCTCTTCTTCAGATCAAAACCTTATTAGCCCTGAGCTGCCATGAGCAGGAAATGGTTGTGAGCTCCCTCGTCATTGGAGCC CTCCTTGCCTCACTCACCGGAGGGGTCCTGATAGACAGATATGGAAGAAGGACAGCAATCATCTTGTCATCCTGCCTGCTTGGACTCGGA AGCTTAGTCTTGATCCTCAGTTTATCCTACACGGTTCTTATAGTGGGACGCATTGCCATAGGGGTCTCCATCTCCCTCTCTTCCATTGCC ACTTGTGTTTACATCGCAGAGATTGCTCCTCAACACAGAAGAGGCCTTCTTGTGTCACTGAATGAGCTGATGATTGTCATCGGCATTCTT TCTGCCTATATTTCAAATTACGCATTTGCCAATGTTTTCCATGGCTGGAAGTACATGTTTGGTCTTGTGATTCCCTTGGGAGTTTTGCAA GCAATTGCAATGTATTTTCTTCCTCCAAGCCCTCGGTTTCTGGTGATGAAAGGACAAGAGGGAGCTGCTAGCAAGGTTCTTGGAAGGTTA AGAGCACTCTCAGATACAACTGAGGAACTCACTGTGATCAAATCCTCCCTGAAAGATGAATATCAGTACAGTTTTTGGGATCTGTTTCGT TCAAAAGACAACATGCGGACCCGAATAATGATAGGACTAACACTAGTATTTTTTGTACAAATCACTGGCCAACCAAACATATTGTTCTAT GCATCAACTGTTTTGAAGTCAGTTGGATTTCAAAGCAATGAGGCAGCTAGCCTCGCCTCCACTGGGGTTGGAGTCGTCAAGGTCATTAGC ACCATCCCTGCCACTCTTCTTGTAGACCATGTCGGCAGCAAAACATTCCTCTGCATTGGCTCCTCTGTGATGGCAGCTTCGTTGGTGACC ATGGGCATCGTAAATCTCAACATCCACATGAACTTCACCCATATCTGCAGAAGCCACAATTCTATCAACCAGTCCTTGGATGAGTCTGTG ATTTATGGACCAGGAAACCTGTCAACCAACAACAATACTCTCAGAGACCACTTCAAAGGGATTTCTTCCCATAGCAGAAGCTCACTCATG CCCCTGAGAAATGATGTGGATAAGAGAGGGGAGACGACCTCAGCATCCTTGCTAAATGCTGGATTAAGCCACACTGAATACCAGATAGTC ACAGACCCTGGGGACGTCCCAGCTTTTTTGAAATGGCTGTCCTTAGCCAGCTTGCTTGTTTATGTTGCTGCTTTTTCAATTGGTCTAGGA CCAAGTACGAAGGTGGATCAAGAGCCCAATGGTCAGTGTGGACAAGCATCAGAGTCCCAGCCTGAAGTACACCGGCTCCTCCATGGTGCA CATCCCTCCAGGGGAGCCAGACTTCGAGTCTTCCTTGTGTCAAACATGCCTGGGTGAACATGCTTTCCAAAGAGGGGTTCTCCCTCAGGA GAACGAGTCATGTTCATGGGAAACTCAATCTGGGTGTGAAGTAAGTTCATGTTCGCTCTGGATCTATTCTCCTGGAAAAATTCTGGGCCT TTGTTTTTCTTGTATTTCTGCCAGAGTATACCCAAAAAATAATTTTTTAATGCATATTTATAAAGCTTCTGAGGAAGACCTAGAATTGTG |
* Fusion transcript sequences (Full-length transcript). |
>In-frame_SLC2A12_ENST00000275230_chr6_134373516_-_SGK1_ENST00000367858_chr6_134583286_-_2793nt AGAAACAAAGTTGGTCACAAATCACATTAGCTTTGCCCGAAGTTTTTCCCCACACTCTTCTTTAGCATGCTATTATGGGGAAAGTGACCA CTCCTGGGAGCGGGGGTGGTCGGGGCGGTTTGGTGGCGGGGAAGCGGCTGTAACTTCTACGTGACCATGGTACCTGTTGAAAACACCGAG GGCCCCAGTCTGCTGAACCAGAAGGGGACAGCCGTGGAGACGGAGGGCAGCGGCAGCCGGCATCCTCCCTGGGCGAGAGGTACGAAGGTG GATCAAGAGCCCAATGGTCAGTGTGGACAAGCATCAGAGTCCCAGCCTGAAGTACACCGGCTCCTCCATGGTGCACATCCCTCCAGGGGA GCCAGACTTCGAGTCTTCCTTGTGTCAAACATGCCTGGGTGAACATGCTTTCCAAAGAGGGGTTCTCCCTCAGGAGAACGAGTCATGTTC ATGGGAAACTCAATCTGGGTGTGAAGTGAGAGAGCCATGTAATCATGCCAACATCCTGACCAAGCCCGATCCAAGAACCTTCTGGACTAA TGATGATCCAGCTTTCATGAAGCAGAGGAGGATGGGTCTGAACGACTTTATTCAGAAGATTGCCAATAACTCCTATGCATGCAAACACCC TGAAGTTCAGTCCATCTTGAAGATCTCCCAACCTCAGGAGCCTGAGCTTATGAATGCCAACCCTTCTCCTCCACCAAGTCCTTCTCAGCA AATCAACCTTGGCCCGTCGTCCAATCCTCATGCTAAACCATCTGACTTTCACTTCTTGAAAGTGATCGGAAAGGGCAGTTTTGGAAAGGT TCTTCTAGCAAGACACAAGGCAGAAGAAGTGTTCTATGCAGTCAAAGTTTTACAGAAGAAAGCAATCCTGAAAAAGAAAGAGGAGAAGCA TATTATGTCGGAGCGGAATGTTCTGTTGAAGAATGTGAAGCACCCTTTCCTGGTGGGCCTTCACTTCTCTTTCCAGACTGCTGACAAATT GTACTTTGTCCTAGACTACATTAATGGTGGAGAGTTGTTCTACCATCTCCAGAGGGAACGCTGCTTCCTGGAACCACGGGCTCGTTTCTA TGCTGCTGAAATAGCCAGTGCCTTGGGCTACCTGCATTCACTGAACATCGTTTATAGAGACTTAAAACCAGAGAATATTTTGCTAGATTC ACAGGGACACATTGTCCTTACTGACTTCGGACTCTGCAAGGAGAACATTGAACACAACAGCACAACATCCACCTTCTGTGGCACGCCGGA GTATCTCGCACCTGAGGTGCTTCATAAGCAGCCTTATGACAGGACTGTGGACTGGTGGTGCCTGGGAGCTGTCTTGTATGAGATGCTGTA TGGCCTGCCGCCTTTTTATAGCCGAAACACAGCTGAAATGTACGACAACATTCTGAACAAGCCTCTCCAGCTGAAACCAAATATTACAAA TTCCGCAAGACACCTCCTGGAGGGCCTCCTGCAGAAGGACAGGACAAAGCGGCTCGGGGCCAAGGATGACTTCATGGAGATTAAGAGTCA TGTCTTCTTCTCCTTAATTAACTGGGATGATCTCATTAATAAGAAGATTACTCCCCCTTTTAACCCAAATGTGAGTGGGCCCAACGACCT ACGGCACTTTGACCCCGAGTTTACCGAAGAGCCTGTCCCCAACTCCATTGGCAAGTCCCCTGACAGCGTCCTCGTCACAGCCAGCGTCAA GGAAGCTGCCGAGGCTTTCCTAGGCTTTTCCTATGCGCCTCCCACGGACTCTTTCCTCTGAACCCTGTTAGGGCTTGGTTTTAAAGGATT TTATGTGTGTTTCCGAATGTTTTAGTTAGCCTTTTGGTGGAGCCGCCAGCTGACAGGACATCTTACAAGAGAATTTGCACATCTCTGGAA GCTTAGCAATCTTATTGCACACTGTTCGCTGGAAGCTTTTTGAAGAGCACATTCTCCTCAGTGAGCTCATGAGGTTTTCATTTTTATTCT TCCTTCCAACGTGGTGCTATCTCTGAAACGAGCGTTAGAGTGCCGCCTTAGACGGAGGCAGGAGTTTCGTTAGAAAGCGGACGCTGTTCT AAAAAAGGTCTCCTGCAGATCTGTCTGGGCTGTGATGACGAATATTATGAAATGTGCCTTTTCTGAAGAGATTGTGTTAGCTCCAAAGCT TTTCCTATCGCAGTGTTTCAGTTCTTTATTTTCCCTTGTGGATATGCTGTGTGAACCGTCGTGTGAGTGTGGTATGCCTGATCACAGATG GATTTTGTTATAAGCATCAATGTGACACTTGCAGGACACTACAACGTGGGACATTGTTTGTTTCTTCCATATTTGGAAGATAAATTTATG TGTAGACTTTTTTGTAAGATACGGTTAATAACTAAAATTTATTGAAATGGTCTTGCAATGACTCGTATTCAGATGCTTAAAGAAAGCATT GCTGCTACAAATATTTCTATTTTTAGAAAGGGTTTTTATGGACCAATGCCCCAGTTGTCAGTCAGAGCCGTTGGTGTTTTTCATTGTTTA AAATGTCACCTGTAAAATGGGCATTATTTATGTTTTTTTTTTTGCATTCCTGATAATTGTATGTATTGTATAAAGAACGTCTGTACATTG GGTTATAACACTAGTATATTTAAACTTACAGGCTTATTTGTAATGTAAACCACCATTTTAATGTACTGTAATTAACATGGTTATAATACG TACAATCCTTCCCTCATCCCATCACACAACTTTTTTTGTGTGTGATAAACTGATTTTGGTTTGCAATAAAACCTTGAAAAATATTTACAT >In-frame_SLC2A12_ENST00000275230_chr6_134349519_-_SGK1_ENST00000524929_chr6_134583286_-_3956nt AGAAACAAAGTTGGTCACAAATCACATTAGCTTTGCCCGAAGTTTTTCCCCACACTCTTCTTTAGCATGCTATTATGGGGAAAGTGACCA CTCCTGGGAGCGGGGGTGGTCGGGGCGGTTTGGTGGCGGGGAAGCGGCTGTAACTTCTACGTGACCATGGTACCTGTTGAAAACACCGAG GGCCCCAGTCTGCTGAACCAGAAGGGGACAGCCGTGGAGACGGAGGGCAGCGGCAGCCGGCATCCTCCCTGGGCGAGAGGCTGCGGCATG TTTACCTTCCTGTCATCTGTCACTGCTGCTGTCAGTGGCCTCCTGGTGGGTTATGAACTTGGGATCATCTCTGGGGCTCTTCTTCAGATC AAAACCTTATTAGCCCTGAGCTGCCATGAGCAGGAAATGGTTGTGAGCTCCCTCGTCATTGGAGCCCTCCTTGCCTCACTCACCGGAGGG GTCCTGATAGACAGATATGGAAGAAGGACAGCAATCATCTTGTCATCCTGCCTGCTTGGACTCGGAAGCTTAGTCTTGATCCTCAGTTTA TCCTACACGGTTCTTATAGTGGGACGCATTGCCATAGGGGTCTCCATCTCCCTCTCTTCCATTGCCACTTGTGTTTACATCGCAGAGATT GCTCCTCAACACAGAAGAGGCCTTCTTGTGTCACTGAATGAGCTGATGATTGTCATCGGCATTCTTTCTGCCTATATTTCAAATTACGCA TTTGCCAATGTTTTCCATGGCTGGAAGTACATGTTTGGTCTTGTGATTCCCTTGGGAGTTTTGCAAGCAATTGCAATGTATTTTCTTCCT CCAAGCCCTCGGTTTCTGGTGATGAAAGGACAAGAGGGAGCTGCTAGCAAGGTTCTTGGAAGGTTAAGAGCACTCTCAGATACAACTGAG GAACTCACTGTGATCAAATCCTCCCTGAAAGATGAATATCAGTACAGTTTTTGGGATCTGTTTCGTTCAAAAGACAACATGCGGACCCGA ATAATGATAGGACTAACACTAGTATTTTTTGTACAAATCACTGGCCAACCAAACATATTGTTCTATGCATCAACTGTTTTGAAGTCAGTT GGATTTCAAAGCAATGAGGCAGCTAGCCTCGCCTCCACTGGGGTTGGAGTCGTCAAGGTCATTAGCACCATCCCTGCCACTCTTCTTGTA GACCATGTCGGCAGCAAAACATTCCTCTGCATTGGCTCCTCTGTGATGGCAGCTTCGTTGGTGACCATGGGCATCGTAAATCTCAACATC CACATGAACTTCACCCATATCTGCAGAAGCCACAATTCTATCAACCAGTCCTTGGATGAGTCTGTGATTTATGGACCAGGAAACCTGTCA ACCAACAACAATACTCTCAGAGACCACTTCAAAGGGATTTCTTCCCATAGCAGAAGCTCACTCATGCCCCTGAGAAATGATGTGGATAAG AGAGGGGAGACGACCTCAGCATCCTTGCTAAATGCTGGATTAAGCCACACTGAATACCAGATAGTCACAGACCCTGGGGACGTCCCAGCT TTTTTGAAATGGCTGTCCTTAGCCAGCTTGCTTGTTTATGTTGCTGCTTTTTCAATTGGTCTAGGACCAAGTACGAAGGTGGATCAAGAG CCCAATGGTCAGTGTGGACAAGCATCAGAGTCCCAGCCTGAAGTACACCGGCTCCTCCATGGTGCACATCCCTCCAGGGGAGCCAGACTT CGAGTCTTCCTTGTGTCAAACATGCCTGGGTGAACATGCTTTCCAAAGAGGGGTTCTCCCTCAGGAGAACGAGTCATGTTCATGGGAAAC TCAATCTGGGTGTGAAGTAAGTTCATGTTCGCTCTGGATCTATTCTCCTGGAAAAATTCTGGGCCTTTGTTTTTCTTGTATTTCTGCCAG AGTATACCCAAAAAATAATTTTTTAATGCATATTTATAAAGCTTCTGAGGAAGACCTAGAATTGTGGTCTTTGTTAGCTCATTATGTTAT TTTTTTAAAGTAGGCTTTATATTTTAGAGCAGCTTTAAGTTCACAGCAACATTGAGCAGAAGGTACAGAGATTACCCATATACGCTTGTC CCCATGCACGTATAACCTACTTTGCCATCAACATTCCCTAGCAGAGTTTTATGTTAGAGTTCACTCTTGGTGTTATACATTCTATGGGTT TGGACTAATGTATAATAACATGCATCCACCATTACAGTATCATACAGTTAAGTTTCACTGCCCTAAAAATCCTCTGCCCTCCACTATTCA TCCCCTCCTTACCCTGACCCCTAGCAACCACTGATCTTTTTACTGTCTCCATAGATTTGCCTTTTCCAGAATGTCATCTAGCTGAATCAT GCAGTATGTTGTATTAATGTTTTACGTGGGTCCAAGACTGATACAGCAATGTGTTGGTAAACTGGCAATTCCTCAGAAGTGGTTTGATCA CACAGGAGATCAAGTCTTAGATGATACAACGATTGTAATAGTCATCTACATGTTCGTAGCTTCCATTGAAATATTTAGTTCAACACGATT TGATCCATTTACAGAGCACTATGTATACTTTTCATTATTTTTCTCAAGCTCATATATACTCACATTTTTACTAAGACTTATTTTCCCTGC TACTCCAAGAGTTGTTTTTTAAAAATTTTGTTAATCCAAGAAAACCAGATAACTGATTCATCTTGCAGTTTCTAAGATTTCAAAAATTTA AGATTATATTTTTAACTTATAACTTAATTAGGCCCATATTTATTTTGATTTTTAAAACCATTATATAAAATGCTTATATTATTTTTACCA TCATACTGACATAAAAATACAATATTTAGAAGACAGAACATGTTATTACAAAGTACAGTTAATTGTAAGTGATCTTCCAAGTCAGTGCAT CATAGAATGATAAACGTTAATAACCGCTCACCTTTTTTATTTTTAGCAAGGTAACCATTTTCCAGAGATAAAATAATCATTTAGCTGCTA AAAGACTGAAGACATTAAATCTGAGTTCCTTTTCACTCTGAGTTATCACGCAATGTCGCTGAATCTGTTTCATAATTTGTCTACTTTCTT TCTTTCTTTTTTTTTTTTTTTTGAGTTTCACTCTTGTTGCCCAGACTGGAGTGCAATGGCACGATCTCGGCTCACTGCAACCTCCGCTTC CTGAGTTCAAGTAATTCTTCTGCCTCAGTCTCCCGAGTAGCTGGGATTACAGGCACCCAACACCACGCCTGGCTAATTTTTGTATTTTTA ATAGAAACAGGGTTTCTCTATGTTGGTCAGGCTGGTGTCAAACTCCCAACCTCAGGTAATCCACCTGCGTCGGCTTTCCAAATTGCTGGG ATTACAGGCATGAGCCACTACGCCGGCCCTTTTTTTGGGGGGGGTGGGGGTCGGGGACAGGGAGACAGGGGGACAGAGTCTTGCTCTGTA ACCCTGACTTGAGTGCAGTAGTGCAATCATAACTCACTGTTACCTCAAACTCCTAGGTTCAAGTGATCCTCCCACCTCAACCCTCCCAAG TAAATAAGACCACAGGCATACGCCAACAAACCTGGCTAATTAAAAAAAAAAAATTTTTTTTGTAGAAACAGGGTGTTGTCATACTGACCA GGCTGGTCTTGAACTCCTGGCTTCAAGTGATCCTCCCAAAATGCTGGGATTATAGGTATGAGGCACAATGCCCAGCCTACTTGTCTACTT TCTACGGTTATTGGAAAAATCAAATGAGATTGATATGAAATGTTTCATAATCTATAGAATGCCATGCAAATATAAATCATTATTGCTCAT GTTTGCTGATTTACATATTAGCTAAGCCTGTGACTCTGTAACACTATATTAGACTTCCATAACTGGGTTAGCACTTTGCTGATCCATGAA |
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FusionGenePPI for SLC2A12_SGK1 |
Go to ChiPPI (Chimeric Protein-Protein interactions) to see the chimeric PPI interaction in . |
Protein-protein interactors with each fusion partner protein in wild-type (BIOGRID-3.4.160) |
Hgene | Hgene's interactors | Tgene | Tgene's interactors |
SLC2A12 | TP53, TMEM242, TAMM41, MTFR2, ORMDL2, SLC25A23, SLC25A28, SLC25A51, TSPO, PIGW, SLC19A2, ABHD17B, METTL15, PEX16, SELT, SPPL3, PTPLB, ABCB8, SFXN5, SLC25A24, TMEM11, C4orf29, EFR3A, ATL2, ALG8, ATL3, NSUN3, ASMTL, ADCK4, DNAJC19, NR2F2, SERINC1, TTK, MTX1, CYBA, DNM3, KIRREL, GK, SMAP2, PDXDC1, RER1, GHITM, TARBP1, HOXD13, ACAD10, GNL1, FITM2, CHST11, SPG7, EBP, DOLK, BCS1L, PTPMT1, ORMDL3, WDFY3, TM2D3 | SGK1 | CDC37, LTF, TUFM, CD40, VCP, IGHA1, IARS, PA2G4, PIGR, FANCA, NEDD4, KPNA2, CAMKK2, MAPK7, SLC9A3R2, PDPK1, CARHSP1, PIK3CA, PPP2CA, MLLT3, IKBKG, PDK1, RICTOR, SYVN1, STUB1, TSC22D3, RAF1, COMMD1, SCNN1B, ELAVL1, HSPA4, NEDD4L, WNK4, WNK1, WNK2, MAPT, UBC, HSP90AA1, MAGEA1, GADD45G, TMEM184C, RABAC1, YWHAZ, YWHAQ, MTOR, RPTOR, AKT1S1, CDKN1B, NDRG1, SGK1, ARL5B, MYH14, FKBP5, RAP2A, PCCA, PIN1, ASPG, HRAS, MAPKAP1, TRIM25 |
- Retained PPIs in in-frame fusion. |
Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Still interaction with |
- Lost PPIs in in-frame fusion. |
Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Interaction lost with |
- Retained PPIs, but lost function due to frame-shift fusion. |
Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Interaction lost with |
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RelatedDrugs for SLC2A12_SGK1 |
Drugs targeting genes involved in this fusion gene. (DrugBank Version 5.1.0 2018-04-02) |
Partner | Gene | UniProtAcc | DrugBank ID | Drug name | Drug activity | Drug type | Drug status |
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RelatedDiseases for SLC2A12_SGK1 |
Diseases associated with fusion partners. (DisGeNet 4.0) |
Partner | Gene | Disease ID | Disease name | # pubmeds | Source |
Tgene | SGK1 | C0011882 | Diabetic Neuropathies | 1 | CTD_human |
Tgene | SGK1 | C0023467 | Leukemia, Myelocytic, Acute | 1 | CTD_human |
Tgene | SGK1 | C0024667 | Animal Mammary Neoplasms | 1 | CTD_human |
Tgene | SGK1 | C0024668 | Mammary Neoplasms, Experimental | 1 | CTD_human |
Tgene | SGK1 | C0041696 | Unipolar Depression | 1 | PSYGENET |
Tgene | SGK1 | C0041948 | Uremia | 1 | CTD_human |
Tgene | SGK1 | C1269683 | Major Depressive Disorder | 1 | PSYGENET |