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Center for Computational Systems Medicine
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FusionGeneSummary

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FusionProtFeature

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FusionGeneSequence

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FusionGenePPI

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RelatedDrugs

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RelatedDiseases

Fusion gene ID: 34132

FusionGeneSummary for SLC20A2_FBXW7

check button Fusion gene summary
Fusion gene informationFusion gene name: SLC20A2_FBXW7
Fusion gene ID: 34132
HgeneTgene
Gene symbol

SLC20A2

FBXW7

Gene ID

6575

55294

Gene namesolute carrier family 20 member 2F-box and WD repeat domain containing 7
SynonymsGLVR-2|GLVR2|IBGC1|IBGC3|MLVAR|PIT-2|PIT2|RAM1|Ram-1AGO|CDC4|FBW6|FBW7|FBX30|FBXO30|FBXW6|SEL-10|SEL10|hAgo|hCdc4
Cytomap

8p11.21

4q31.3

Type of geneprotein-codingprotein-coding
Descriptionsodium-dependent phosphate transporter 2gibbon ape leukemia virus receptor 2murine leukemia virus, amphotropic, receptor formurine leukemia virus, amphotropic; receptorsolute carrier family 20 (phosphate transporter), member 2F-box/WD repeat-containing protein 7F-box and WD repeat domain containing 7, E3 ubiquitin protein ligaseF-box and WD-40 domain protein 7 (archipelago homolog, Drosophila)F-box protein FBW7F-box protein FBX30F-box protein SEL-10archipelagohomolog of
Modification date2018052320180527
UniProtAcc

Q08357

Q969H0

Ensembl transtripts involved in fusion geneENST00000342228, ENST00000520262, 
ENST00000520179, ENST00000523340, 
ENST00000281708, ENST00000603548, 
ENST00000604872, ENST00000296555, 
ENST00000263981, ENST00000393956, 
ENST00000603841, ENST00000604095, 
Fusion gene scores* DoF score12 X 9 X 6=6484 X 5 X 4=80
# samples 154
** MAII scorelog2(15/648*10)=-2.11103131238874
possibly effective Gene in Pan-Cancer Fusion Genes (peGinPCFGs).
DoF>8 and MAII<0
log2(4/80*10)=-1
possibly effective Gene in Pan-Cancer Fusion Genes (peGinPCFGs).
DoF>8 and MAII<0
Context

PubMed: SLC20A2 [Title/Abstract] AND FBXW7 [Title/Abstract] AND fusion [Title/Abstract]

Functional or gene categories assigned by FusionGDB annotation
* DoF score (Degree of Frequency) = # partners X # break points X # cancer types
** MAII score (Major Active Isofusion Index) = log2(# samples/DoF score*10)

check button Gene ontology of each fusion partner gene with evidence of Inferred from Direct Assay (IDA) from Entrez
PartnerGeneGO IDGO termPubMed ID
TgeneFBXW7

GO:0016567

protein ubiquitination

12354302|15103331

TgeneFBXW7

GO:0031146

SCF-dependent proteasomal ubiquitin-dependent protein catabolic process

15103331|17434132

TgeneFBXW7

GO:0031398

positive regulation of protein ubiquitination

12628165

TgeneFBXW7

GO:0045741

positive regulation of epidermal growth factor-activated receptor activity

20208556

TgeneFBXW7

GO:0050821

protein stabilization

20208556

TgeneFBXW7

GO:0051443

positive regulation of ubiquitin-protein transferase activity

12628165

TgeneFBXW7

GO:1901800

positive regulation of proteasomal protein catabolic process

23858059

TgeneFBXW7

GO:1903378

positive regulation of oxidative stress-induced neuron intrinsic apoptotic signaling pathway

23858059

TgeneFBXW7

GO:2000060

positive regulation of ubiquitin-dependent protein catabolic process

20208556


check button Fusion gene information from three resources
(ChiTars (NAR, 2018), tumorfusions (NAR, 2018), Gao et al. (Cell, 2018))
* All genome coordinats were lifted-over on hg19.
* Click on the break point to see the gene structure around the break point region using the UCSC Genome Browser.
Data typeSourceCancer typeSampleHgeneHchrHbpHstrandTgeneTchrTbpTstrand
TCGARVLUSCTCGA-60-2714-01ASLC20A2chr8

42358549

-FBXW7chr4

153247383

-
TCGALDLUSCTCGA-60-2714-01ASLC20A2chr8

42396058

-FBXW7chr4

153247383

-
* LD: Li Ding group's fusion gene list
  RV: Roel Verhaak group's fusion gene list
  ChiTaRs fusion database

check button Open reading frame (ORF) analsis of fusion genes based on Ensembl gene isoform structure.
* Click on the break point to see the gene structure around the break point region using the UCSC Genome Browser.
ORFHenstTenstHgeneHchrHbpHstrandTgeneTchrTbpTstrand
intron-3CDSENST00000342228ENST00000281708SLC20A2chr8

42358549

-FBXW7chr4

153247383

-
intron-3CDSENST00000342228ENST00000603548SLC20A2chr8

42358549

-FBXW7chr4

153247383

-
intron-intronENST00000342228ENST00000604872SLC20A2chr8

42358549

-FBXW7chr4

153247383

-
intron-intronENST00000342228ENST00000296555SLC20A2chr8

42358549

-FBXW7chr4

153247383

-
intron-intronENST00000342228ENST00000263981SLC20A2chr8

42358549

-FBXW7chr4

153247383

-
intron-intronENST00000342228ENST00000393956SLC20A2chr8

42358549

-FBXW7chr4

153247383

-
intron-intronENST00000342228ENST00000603841SLC20A2chr8

42358549

-FBXW7chr4

153247383

-
intron-intronENST00000342228ENST00000604095SLC20A2chr8

42358549

-FBXW7chr4

153247383

-
5UTR-3CDSENST00000520262ENST00000281708SLC20A2chr8

42358549

-FBXW7chr4

153247383

-
5UTR-3CDSENST00000520262ENST00000603548SLC20A2chr8

42358549

-FBXW7chr4

153247383

-
5UTR-intronENST00000520262ENST00000604872SLC20A2chr8

42358549

-FBXW7chr4

153247383

-
5UTR-intronENST00000520262ENST00000296555SLC20A2chr8

42358549

-FBXW7chr4

153247383

-
5UTR-intronENST00000520262ENST00000263981SLC20A2chr8

42358549

-FBXW7chr4

153247383

-
5UTR-intronENST00000520262ENST00000393956SLC20A2chr8

42358549

-FBXW7chr4

153247383

-
5UTR-intronENST00000520262ENST00000603841SLC20A2chr8

42358549

-FBXW7chr4

153247383

-
5UTR-intronENST00000520262ENST00000604095SLC20A2chr8

42358549

-FBXW7chr4

153247383

-
intron-3CDSENST00000520179ENST00000281708SLC20A2chr8

42358549

-FBXW7chr4

153247383

-
intron-3CDSENST00000520179ENST00000603548SLC20A2chr8

42358549

-FBXW7chr4

153247383

-
intron-intronENST00000520179ENST00000604872SLC20A2chr8

42358549

-FBXW7chr4

153247383

-
intron-intronENST00000520179ENST00000296555SLC20A2chr8

42358549

-FBXW7chr4

153247383

-
intron-intronENST00000520179ENST00000263981SLC20A2chr8

42358549

-FBXW7chr4

153247383

-
intron-intronENST00000520179ENST00000393956SLC20A2chr8

42358549

-FBXW7chr4

153247383

-
intron-intronENST00000520179ENST00000603841SLC20A2chr8

42358549

-FBXW7chr4

153247383

-
intron-intronENST00000520179ENST00000604095SLC20A2chr8

42358549

-FBXW7chr4

153247383

-
intron-3CDSENST00000523340ENST00000281708SLC20A2chr8

42358549

-FBXW7chr4

153247383

-
intron-3CDSENST00000523340ENST00000603548SLC20A2chr8

42358549

-FBXW7chr4

153247383

-
intron-intronENST00000523340ENST00000604872SLC20A2chr8

42358549

-FBXW7chr4

153247383

-
intron-intronENST00000523340ENST00000296555SLC20A2chr8

42358549

-FBXW7chr4

153247383

-
intron-intronENST00000523340ENST00000263981SLC20A2chr8

42358549

-FBXW7chr4

153247383

-
intron-intronENST00000523340ENST00000393956SLC20A2chr8

42358549

-FBXW7chr4

153247383

-
intron-intronENST00000523340ENST00000603841SLC20A2chr8

42358549

-FBXW7chr4

153247383

-
intron-intronENST00000523340ENST00000604095SLC20A2chr8

42358549

-FBXW7chr4

153247383

-
intron-3CDSENST00000342228ENST00000281708SLC20A2chr8

42396058

-FBXW7chr4

153247383

-
intron-3CDSENST00000342228ENST00000603548SLC20A2chr8

42396058

-FBXW7chr4

153247383

-
intron-intronENST00000342228ENST00000604872SLC20A2chr8

42396058

-FBXW7chr4

153247383

-
intron-intronENST00000342228ENST00000296555SLC20A2chr8

42396058

-FBXW7chr4

153247383

-
intron-intronENST00000342228ENST00000263981SLC20A2chr8

42396058

-FBXW7chr4

153247383

-
intron-intronENST00000342228ENST00000393956SLC20A2chr8

42396058

-FBXW7chr4

153247383

-
intron-intronENST00000342228ENST00000603841SLC20A2chr8

42396058

-FBXW7chr4

153247383

-
intron-intronENST00000342228ENST00000604095SLC20A2chr8

42396058

-FBXW7chr4

153247383

-
intron-3CDSENST00000520262ENST00000281708SLC20A2chr8

42396058

-FBXW7chr4

153247383

-
intron-3CDSENST00000520262ENST00000603548SLC20A2chr8

42396058

-FBXW7chr4

153247383

-
intron-intronENST00000520262ENST00000604872SLC20A2chr8

42396058

-FBXW7chr4

153247383

-
intron-intronENST00000520262ENST00000296555SLC20A2chr8

42396058

-FBXW7chr4

153247383

-
intron-intronENST00000520262ENST00000263981SLC20A2chr8

42396058

-FBXW7chr4

153247383

-
intron-intronENST00000520262ENST00000393956SLC20A2chr8

42396058

-FBXW7chr4

153247383

-
intron-intronENST00000520262ENST00000603841SLC20A2chr8

42396058

-FBXW7chr4

153247383

-
intron-intronENST00000520262ENST00000604095SLC20A2chr8

42396058

-FBXW7chr4

153247383

-
intron-3CDSENST00000520179ENST00000281708SLC20A2chr8

42396058

-FBXW7chr4

153247383

-
intron-3CDSENST00000520179ENST00000603548SLC20A2chr8

42396058

-FBXW7chr4

153247383

-
intron-intronENST00000520179ENST00000604872SLC20A2chr8

42396058

-FBXW7chr4

153247383

-
intron-intronENST00000520179ENST00000296555SLC20A2chr8

42396058

-FBXW7chr4

153247383

-
intron-intronENST00000520179ENST00000263981SLC20A2chr8

42396058

-FBXW7chr4

153247383

-
intron-intronENST00000520179ENST00000393956SLC20A2chr8

42396058

-FBXW7chr4

153247383

-
intron-intronENST00000520179ENST00000603841SLC20A2chr8

42396058

-FBXW7chr4

153247383

-
intron-intronENST00000520179ENST00000604095SLC20A2chr8

42396058

-FBXW7chr4

153247383

-
5UTR-3CDSENST00000523340ENST00000281708SLC20A2chr8

42396058

-FBXW7chr4

153247383

-
5UTR-3CDSENST00000523340ENST00000603548SLC20A2chr8

42396058

-FBXW7chr4

153247383

-
5UTR-intronENST00000523340ENST00000604872SLC20A2chr8

42396058

-FBXW7chr4

153247383

-
5UTR-intronENST00000523340ENST00000296555SLC20A2chr8

42396058

-FBXW7chr4

153247383

-
5UTR-intronENST00000523340ENST00000263981SLC20A2chr8

42396058

-FBXW7chr4

153247383

-
5UTR-intronENST00000523340ENST00000393956SLC20A2chr8

42396058

-FBXW7chr4

153247383

-
5UTR-intronENST00000523340ENST00000603841SLC20A2chr8

42396058

-FBXW7chr4

153247383

-
5UTR-intronENST00000523340ENST00000604095SLC20A2chr8

42396058

-FBXW7chr4

153247383

-

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FusionProtFeatures for SLC20A2_FBXW7


check buttonMain function of each fusion partner protein. (from UniProt)
HgeneTgene
SLC20A2

Q08357

FBXW7

Q969H0

Sodium-phosphate symporter which seems to play afundamental housekeeping role in phosphate transport by absorbingphosphate from interstitial fluid for normal cellular functionssuch as cellular metabolism, signal transduction, and nucleic acidand lipid synthesis. In vitro, sodium-dependent phosphate uptakeis not siginificantly affected by acidic and alkaline conditions,however sodium-independent phosphate uptake occurs at acidicconditions. May play a role in extracellular matrix, cartilage andvascular calcification. Functions as a retroviral receptor andconfers human cells susceptibility to infection to amphotropicmurine leukemia virus (A-MuLV), 10A1 murine leukemia virus (10A1MLV) and some feline leukemia virus subgroup B (FeLV-B) variants.{ECO:0000269|PubMed:11435563, ECO:0000269|PubMed:12205090,ECO:0000269|PubMed:15955065, ECO:0000269|PubMed:16790504,ECO:0000269|PubMed:8302848}. Substrate recognition component of a SCF (SKP1-CUL1-F-box protein) E3 ubiquitin-protein ligase complex which mediatesthe ubiquitination and subsequent proteasomal degradation oftarget proteins. Recognizes and binds phosphorylatedsites/phosphodegrons within target proteins and thereafter bringthem to the SCF complex for ubiquitination (PubMed:17434132).Identified substrates include cyclin-E (CCNE1 or CCNE2), JUN, MYC,NOTCH1 released notch intracellular domain (NICD), NOTCH2, MCL1,and probably PSEN1 (PubMed:11565034, PubMed:12354302,PubMed:11585921, PubMed:15103331, PubMed:14739463,PubMed:17558397, PubMed:17873522, PubMed:22608923,PubMed:29149593, PubMed:25775507, PubMed:28007894). Acts as anegative regulator of JNK signaling by binding to phosphorylatedJUN and promoting its ubiquitination and subsequent degradation(PubMed:14739463). SCF(FBXW7) complex mediates the ubiquitinationand subsequent degradation of NFE2L1 (By similarity). Involved inbone homeostasis and negative regulation of osteoclastdifferentiation (PubMed:29149593). {ECO:0000250|UniProtKB:Q8VBV4,ECO:0000269|PubMed:11565034, ECO:0000269|PubMed:11585921,ECO:0000269|PubMed:14739463, ECO:0000269|PubMed:15103331,ECO:0000269|PubMed:17434132, ECO:0000269|PubMed:17558397,ECO:0000269|PubMed:17873522, ECO:0000269|PubMed:22608923,ECO:0000269|PubMed:25775507, ECO:0000269|PubMed:28007894,ECO:0000269|PubMed:29149593, ECO:0000305|PubMed:12354302}.

check buttonRetention analysis result of each fusion partner protein across 39 protein features of UniProt such as six molecule processing features, 13 region features, four site features, six amino acid modification features, two natural variation features, five experimental info features, and 3 secondary structure features. Here, because of limited space for viewing, we only show the protein feature retention information belong to the 13 regional features. All retention annotation result can be downloaded at

download page

.

* Minus value of BPloci means that the break pointn is located before the CDS.
- In-frame and retained protein feature among the 13 regional features.
PartnerGeneHbpTbpENSTStrandBPexonTotalExonProtein feature loci*BPlociTotalLenProtein featureProtein feature note

- In-frame and not-retained protein feature among the 13 regional features.
PartnerGeneHbpTbpENSTStrandBPexonTotalExonProtein feature loci*BPlociTotalLenProtein featureProtein feature note


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FusionGeneSequence for SLC20A2_FBXW7


check button For in-frame fusion transcripts, we provide the fusion transcript sequences and fusion amino acid sequences.
(nt: nucleotides, aa: amino acids)

* Fusion amino acid sequences.

* Fusion transcript sequences (only coding sequence (CDS) region).

* Fusion transcript sequences (Full-length transcript).

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FusionGenePPI for SLC20A2_FBXW7


check button Go to ChiPPI (Chimeric Protein-Protein interactions) to see the chimeric PPI interaction in

ChiPPI page

.

check button Protein-protein interactors with each fusion partner protein in wild-type (BIOGRID-3.4.160)
HgeneHgene's interactorsTgeneTgene's interactors
SLC20A2MOV10, NXF1, PTGFR, TMEM17, TMEM216, ARMC6, SLC20A1, SLC22A6, HAVCR2, SYP, TOR1AIP2, AIFM1, GGT5, TRIM25FBXW7NFKB2, CCNE1, PARK2, SKP1, MMS22L, LINGO1, KIAA1875, SUMF2, ARL6IP1, SHPRH, CUL1, PSEN1, NOTCH1, MTOR, MYB, HIPK2, PPARGC1A, MYC, SREBF1, KLF5, GNB2L1, CCNE2, MYCN, AURKA, DCLRE1C, HIF1A, EIF3E, FBXW7, NFE2L1, PIN1, TP63, RBX1, EBNA1BP2, USP28, TOP2A, PSMA2, REST, GSK3B, RICTOR, GLMN, JAG1, BTG1, CDC34, AURKB, MED12, MED1, MED13, MED13L, MED14, MED23, MED16, MED15, MED4, MED8, MED24, MED20, MED22, MED27, MED10, MED9, MED17, MED11, MED19, MED21, MED28, MED29, MED30, MED31, MED6, CCNC, CCDC6, STOML1, CDK2, HSP90AA1, KLF2, PTEN, NCOA3, CSF3R, UBE2QL1, MAP4K1, EYA1, YAP1, DAB2IP, MCL1, MOV10, NXF1, USP36, SNCA, CRY2, GATA3, CUL7, BUB1B, FANCD2, RAB4B, RAG1, RFWD3, KRAS, MAPK3, ANGPTL4, BCAS3, BEX1, IL24, SCGB3A1, TRIM25, GATA2, NFE2L3, RUNX2, FAM83D, RND3, MYCBP2, FBXO45, HECTD1, CCT3, HSF1, FKBP5, DDX39A, YBX1, SERBP1, RAE1, FMR1, RPL29, SF3A3, TSEN34, BCAS2, RPL10L, CPSF3, NMT1, RBM28, SPRYD3, IPO4, CDK8, DDX17, EP400, NAA10, ARID4B, FAM60A, GTF3C2, MAX, TAF9, RCOR1, HIST1H2AD, HIST1H1E, CREB3L2, MORF4L2, CEBPZ, SIN3A, SSRP1, RIOK1, PPP1CB, ACLY, CSNK1A1L, SMU1, GFPT2, ATG16L2, DPM1, HADHA, TUBBP2, TUBA1C, TMOD3, ACTR2, PRPH, MAP7D1, MAGEF1, AP3D1, CLASP1, SNX8, PSMA4, MYO5A, MAGEC2, ENO1, FGA, RERE, GAK, CPSF1, OSGIN2, SPAG11B, MS4A1, CDH19, HERC2P2, PVRL3, SUPT6H, MPPED1, GAMTP1, SSBP1, TXLNGY, SSH2, CYBB, CYLD, PUF60, CMIP, RSBN1L, C6orf136, EPOR, GRM3, NAPG, TBX4, GGCT, MASTL, DDO, KATNAL1, RSPRY1, MOCS1, NDUFB9, NELFE, NCOR1, TRAT1, EXOSC4, TMEM126B, C8orf44, ACTR5, C5orf64, SOX7, GMDS, MEP1A, PTPRN2, CTDP1, UBAC1, NAT8B, RNPC3, VPS16, MTFMT, ZC3H18, SPRED1, SNRNP70, LETM2, EBF3, SPTBN1, PHF20L1, CINP, EIF4E3, COL1A2, SLC35A1, DIDO1, TNFRSF19, TMEM65, LINC00173, AP2A1, EIF4A3, TUBA1B, ZCCHC3, EFHC1, DNAJC21, MMAA, C5orf51, LRRTM1, LCE1B, COPS6, FAM32A, TBCB, ITGAV, POLR2K, SNRPB2, BARX2, CTIF, DUSP16, OR51V1, COL12A1, CDK18, PTGDS, SLC17A1, COPS3, TRIM58, ZFR, SRBD1, SHROOM4, RALYL, NUDT4P1, GRIK3, DLC1, RBMX, PALM2-AKAP2, CDR2, LPA, SPDL1, H2AFY2, C5orf15, SENP7, ALKBH8, ZNF563, PRPSAP1, SNRPF, TJP2, RERG, B3GALNT2, BRAF, JUN, SOX10, DEPTOR, FOXM1, C1orf86, STAT3, PLK1, CDX2, CTNNB1, SOX9, PA2G4, EGLN2, STYX, FBXW2, PRR36, CREB3L1, TRAF2, TP53, MAGEA1, ARHGDIA, EXT1, TSC22D4, PLK2, NONO, HNRNPK, BLM, DISC1


check button - Retained PPIs in in-frame fusion.
PartnerGeneHbpTbpENSTStrandBPexonTotalExonProtein feature loci*BPlociTotalLenStill interaction with


check button - Lost PPIs in in-frame fusion.
PartnerGeneHbpTbpENSTStrandBPexonTotalExonProtein feature loci*BPlociTotalLenInteraction lost with


check button - Retained PPIs, but lost function due to frame-shift fusion.
PartnerGeneHbpTbpENSTStrandBPexonTotalExonProtein feature loci*BPlociTotalLenInteraction lost with


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RelatedDrugs for SLC20A2_FBXW7


check button Drugs targeting genes involved in this fusion gene.
(DrugBank Version 5.1.0 2018-04-02)
PartnerGeneUniProtAccDrugBank IDDrug nameDrug activityDrug typeDrug status

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RelatedDiseases for SLC20A2_FBXW7


check button Diseases associated with fusion partners.
(DisGeNet 4.0)
PartnerGeneDisease IDDisease name# pubmedsSource
HgeneSLC20A2C0393590Fahr's syndrome (disorder)6CTD_human;ORPHANET;UNIPROT
HgeneSLC20A2C0004782Basal Ganglia Diseases1CTD_human
HgeneSLC20A2C0006663Calcinosis1CTD_human
TgeneFBXW7C1961099Precursor T-Cell Lymphoblastic Leukemia-Lymphoma2CTD_human
TgeneFBXW7C0007117Basal cell carcinoma1CTD_human
TgeneFBXW7C0010606Adenoid Cystic Carcinoma1CTD_human
TgeneFBXW7C0014170Endometrial Neoplasms1CTD_human
TgeneFBXW7C0017638Glioma1CTD_human
TgeneFBXW7C0279626Squamous cell carcinoma of esophagus1CTD_human
TgeneFBXW7C0919532Genomic Instability1CTD_human
TgeneFBXW7C1458155Mammary Neoplasms1CTD_human