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Fusion gene ID: 34006 |
FusionGeneSummary for SLAIN2_CWH43 |
 Fusion gene summary |
| Fusion gene information | Fusion gene name: SLAIN2_CWH43 | Fusion gene ID: 34006 | Hgene | Tgene | Gene symbol | SLAIN2 | CWH43 | Gene ID | 57606 | 80157 |
| Gene name | SLAIN motif family member 2 | cell wall biogenesis 43 C-terminal homolog | |
| Synonyms | KIAA1458 | CWH43-C|PGAP2IP | |
| Cytomap | 4p11 | 4p11 | |
| Type of gene | protein-coding | protein-coding | |
| Description | SLAIN motif-containing protein 2 | PGAP2-interacting proteincell wall biogenesis protein 43 C-terminal homolog | |
| Modification date | 20180519 | 20180523 | |
| UniProtAcc | Q9P270 | Q9H720 | |
| Ensembl transtripts involved in fusion gene | ENST00000264313, ENST00000506375, ENST00000512093, | ENST00000226432, ENST00000513409, | |
| Fusion gene scores | * DoF score | 1 X 1 X 1=1 | 3 X 3 X 3=27 |
| # samples | 1 | 3 | |
| ** MAII score | log2(1/1*10)=3.32192809488736 | log2(3/27*10)=0.15200309344505 effective Gene in Pan-Cancer Fusion Genes (eGinPCFGs). DoF>8 and MAII>0 | |
| Context | PubMed: SLAIN2 [Title/Abstract] AND CWH43 [Title/Abstract] AND fusion [Title/Abstract] | ||
| Functional or gene categories assigned by FusionGDB annotation | |||
| * DoF score (Degree of Frequency) = # partners X # break points X # cancer types ** MAII score (Major Active Isofusion Index) = log2(# samples/DoF score*10) |
| Gene ontology of each fusion partner gene with evidence of Inferred from Direct Assay (IDA) from Entrez |
| Partner | Gene | GO ID | GO term | PubMed ID |
| Fusion gene information from three resources (ChiTars (NAR, 2018), tumorfusions (NAR, 2018), Gao et al. (Cell, 2018)) * All genome coordinats were lifted-over on hg19. * Click on the break point to see the gene structure around the break point region using the UCSC Genome Browser. |
| Data type | Source | Cancer type | Sample | Hgene | Hchr | Hbp | Hstrand | Tgene | Tchr | Tbp | Tstrand |
| TCGA | LD | HNSC | TCGA-CN-4725-01A | SLAIN2 | chr4 | 48385801 | + | CWH43 | chr4 | 49005752 | + |
| * LD: Li Ding group's fusion gene list RV: Roel Verhaak group's fusion gene list ChiTaRs fusion database |
| Open reading frame (ORF) analsis of fusion genes based on Ensembl gene isoform structure. * Click on the break point to see the gene structure around the break point region using the UCSC Genome Browser. |
| ORF | Henst | Tenst | Hgene | Hchr | Hbp | Hstrand | Tgene | Tchr | Tbp | Tstrand |
| In-frame | ENST00000264313 | ENST00000226432 | SLAIN2 | chr4 | 48385801 | + | CWH43 | chr4 | 49005752 | + |
| In-frame | ENST00000264313 | ENST00000513409 | SLAIN2 | chr4 | 48385801 | + | CWH43 | chr4 | 49005752 | + |
| intron-3CDS | ENST00000506375 | ENST00000226432 | SLAIN2 | chr4 | 48385801 | + | CWH43 | chr4 | 49005752 | + |
| intron-3CDS | ENST00000506375 | ENST00000513409 | SLAIN2 | chr4 | 48385801 | + | CWH43 | chr4 | 49005752 | + |
| In-frame | ENST00000512093 | ENST00000226432 | SLAIN2 | chr4 | 48385801 | + | CWH43 | chr4 | 49005752 | + |
| In-frame | ENST00000512093 | ENST00000513409 | SLAIN2 | chr4 | 48385801 | + | CWH43 | chr4 | 49005752 | + |
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FusionProtFeatures for SLAIN2_CWH43 |
| Main function of each fusion partner protein. (from UniProt) |
| Hgene | Tgene |
| SLAIN2 | CWH43 |
| Binds to the plus end of microtubules and regulatesmicrotubule dynamics and microtubule organization. Promotescytoplasmic microtubule nucleation and elongation. Required fornormal structure of the microtubule cytoskeleton duringinterphase. {ECO:0000269|PubMed:21646404}. | Involved in lipid remodeling during GPI-anchormaturation. {ECO:0000250}. |
| Retention analysis result of each fusion partner protein across 39 protein features of UniProt such as six molecule processing features, 13 region features, four site features, six amino acid modification features, two natural variation features, five experimental info features, and 3 secondary structure features. Here, because of limited space for viewing, we only show the protein feature retention information belong to the 13 regional features. All retention annotation result can be downloaded at . * Minus value of BPloci means that the break pointn is located before the CDS. |
| - In-frame and retained protein feature among the 13 regional features. |
| Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Protein feature | Protein feature note |
| Hgene | SLAIN2 | chr4:48385801 | chr4:49005752 | ENST00000264313 | + | 6 | 8 | 4_39 | 453 | 582 | Coiled coil | Ontology_term=ECO:0000269 |
| Hgene | SLAIN2 | chr4:48385801 | chr4:49005752 | ENST00000264313 | + | 6 | 8 | 124_128 | 453 | 582 | Compositional bias | Note=Poly-Glu |
| Tgene | >CWH43 | chr4:48385801 | chr4:49005752 | ENST00000226432 | + | 5 | 16 | 607_627 | 267 | 700 | Region | Required for function in lipid remodeling |
| Tgene | >CWH43 | chr4:48385801 | chr4:49005752 | ENST00000226432 | + | 5 | 16 | 273_293 | 267 | 700 | Transmembrane | Helical |
| Tgene | >CWH43 | chr4:48385801 | chr4:49005752 | ENST00000226432 | + | 5 | 16 | 316_336 | 267 | 700 | Transmembrane | Helical |
| Tgene | >CWH43 | chr4:48385801 | chr4:49005752 | ENST00000226432 | + | 5 | 16 | 349_369 | 267 | 700 | Transmembrane | Helical |
| Tgene | >CWH43 | chr4:48385801 | chr4:49005752 | ENST00000226432 | + | 5 | 16 | 390_410 | 267 | 700 | Transmembrane | Helical |
| - In-frame and not-retained protein feature among the 13 regional features. |
| Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Protein feature | Protein feature note |
| Tgene | CWH43 | chr4:48385801 | chr4:49005752 | ENST00000226432 | + | 5 | 16 | 123_143 | 267 | 700 | Transmembrane | Helical |
| Tgene | CWH43 | chr4:48385801 | chr4:49005752 | ENST00000226432 | + | 5 | 16 | 13_33 | 267 | 700 | Transmembrane | Helical |
| Tgene | CWH43 | chr4:48385801 | chr4:49005752 | ENST00000226432 | + | 5 | 16 | 196_216 | 267 | 700 | Transmembrane | Helical |
| Tgene | CWH43 | chr4:48385801 | chr4:49005752 | ENST00000226432 | + | 5 | 16 | 237_257 | 267 | 700 | Transmembrane | Helical |
| Tgene | CWH43 | chr4:48385801 | chr4:49005752 | ENST00000226432 | + | 5 | 16 | 41_61 | 267 | 700 | Transmembrane | Helical |
| Tgene | CWH43 | chr4:48385801 | chr4:49005752 | ENST00000226432 | + | 5 | 16 | 93_113 | 267 | 700 | Transmembrane | Helical |
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FusionGeneSequence for SLAIN2_CWH43 |
| For in-frame fusion transcripts, we provide the fusion transcript sequences and fusion amino acid sequences. (nt: nucleotides, aa: amino acids) |
| * Fusion amino acid sequences. |
| >In-frame_SLAIN2_ENST00000264313_chr4_48385801_+_CWH43_ENST00000226432_chr4_49005752_+_886aa MEDVNSNVNADQEVRKLQELVKKLEKQNEQLRSRSGAVQGAGSLGPGSPVRAGASIPSSGAASPRGFPLGLSAKSGGGPGSGPRRTSSEE LRDATSLLAAGEGGLLDEVEPLRPDELERLSGWEEEEESWLYSSPKKKLTPMQKSVSPLVWCRQVLDYPSPDVECAKKSLIHKLDQTMSA LKRQNLYNNPFNSMSYTSPYSPNASSPYSSGFNSPSSTPVRPPIVKQLILPGNSGNLKSSDRNPPLSPQSSIDSELSASELDEDSIGSNY KLNDVTDVQILARMQEESLRQEYAATTSRRSSGSSCNSTRRGTFSDQELDAQSLDDEDDNMHHAVYPAVNRFSPSPRNSPRPSPKQSPRN SPRSRSPARGIEYSRVSPQPMISRLQQPRLSLQGHPTDLQTSNVKNEEKLRRSLPNLSRTSNTQVDSVKSSRSDSNFQVPNGGIPRMQPQ ASARTASAAGLLYLHTWAAAVSGCVFAIFTASMWPQTLGHLINSGTNPGKTMTIAMIFYLLEIFFCAWCTAFKFVPGGVYARERSDVLLG TMMLIIGLNMLFGPKKNLDLLLQTKNSSKVLFRKSEKYMKLFLWLLVGVGLLGLGLRHKAYERKLGKVAPTKEVSAAIWPFRFGYDNEGW SSLERSAHLLNETGADFITILESDASKPYMGNNDLTMWLGEKLGFYTDFGPSTRYHTWGIMALSRYPIVKSEHHLLPSPEGEIAPAITLT VNISGKLVDFVVTHFGNHEDDLDRKLQAIAVSKLLKSSSNQVIFLGYITSAPGSRDYLQLTEHGNVKDIDSTDHDRWCEYIMYRGLIRLG >In-frame_SLAIN2_ENST00000264313_chr4_48385801_+_CWH43_ENST00000513409_chr4_49005752_+_886aa MEDVNSNVNADQEVRKLQELVKKLEKQNEQLRSRSGAVQGAGSLGPGSPVRAGASIPSSGAASPRGFPLGLSAKSGGGPGSGPRRTSSEE LRDATSLLAAGEGGLLDEVEPLRPDELERLSGWEEEEESWLYSSPKKKLTPMQKSVSPLVWCRQVLDYPSPDVECAKKSLIHKLDQTMSA LKRQNLYNNPFNSMSYTSPYSPNASSPYSSGFNSPSSTPVRPPIVKQLILPGNSGNLKSSDRNPPLSPQSSIDSELSASELDEDSIGSNY KLNDVTDVQILARMQEESLRQEYAATTSRRSSGSSCNSTRRGTFSDQELDAQSLDDEDDNMHHAVYPAVNRFSPSPRNSPRPSPKQSPRN SPRSRSPARGIEYSRVSPQPMISRLQQPRLSLQGHPTDLQTSNVKNEEKLRRSLPNLSRTSNTQVDSVKSSRSDSNFQVPNGGIPRMQPQ ASARTASAAGLLYLHTWAAAVSGCVFAIFTASMWPQTLGHLINSGTNPGKTMTIAMIFYLLEIFFCAWCTAFKFVPGGVYARERSDVLLG TMMLIIGLNMLFGPKKNLDLLLQTKNSSKVLFRKSEKYMKLFLWLLVGVGLLGLGLRHKAYERKLGKVAPTKEVSAAIWPFRFGYDNEGW SSLERSAHLLNETGADFITILESDASKPYMGNNDLTMWLGEKLGFYTDFGPSTRYHTWGIMALSRYPIVKSEHHLLPSPEGEIAPAITLT VNISGKLVDFVVTHFGNHEDDLDRKLQAIAVSKLLKSSSNQVIFLGYITSAPGSRDYLQLTEHGNVKDIDSTDHDRWCEYIMYRGLIRLG >In-frame_SLAIN2_ENST00000512093_chr4_48385801_+_CWH43_ENST00000226432_chr4_49005752_+_693aa MSYTSPYSPNASSPYSSGFNSPSSTPVRPPIVKQLILPGNSGNLKSSDRNPPLSPQSSIDSELSASELDEDSIGSNYKLNDVTDVQILAR MQEESLRQEYAATTSRRSSGSSCNSTRRGTFSDQELDAQSLDDEDDNMHHAVYPAVNRFSPSPRNSPRPSPKQSPRNSPRSRSPARGIEY SRVSPQPMISRLQQPRLSLQGHPTDLQTSNVKNEEKLRRSLPNLSRTSNTQVDSVKSSRSDSNFQVPNGGIPRMQPQASARTASAAGLLY LHTWAAAVSGCVFAIFTASMWPQTLGHLINSGTNPGKTMTIAMIFYLLEIFFCAWCTAFKFVPGGVYARERSDVLLGTMMLIIGLNMLFG PKKNLDLLLQTKNSSKVLFRKSEKYMKLFLWLLVGVGLLGLGLRHKAYERKLGKVAPTKEVSAAIWPFRFGYDNEGWSSLERSAHLLNET GADFITILESDASKPYMGNNDLTMWLGEKLGFYTDFGPSTRYHTWGIMALSRYPIVKSEHHLLPSPEGEIAPAITLTVNISGKLVDFVVT HFGNHEDDLDRKLQAIAVSKLLKSSSNQVIFLGYITSAPGSRDYLQLTEHGNVKDIDSTDHDRWCEYIMYRGLIRLGYARISHAELSDSE >In-frame_SLAIN2_ENST00000512093_chr4_48385801_+_CWH43_ENST00000513409_chr4_49005752_+_693aa MSYTSPYSPNASSPYSSGFNSPSSTPVRPPIVKQLILPGNSGNLKSSDRNPPLSPQSSIDSELSASELDEDSIGSNYKLNDVTDVQILAR MQEESLRQEYAATTSRRSSGSSCNSTRRGTFSDQELDAQSLDDEDDNMHHAVYPAVNRFSPSPRNSPRPSPKQSPRNSPRSRSPARGIEY SRVSPQPMISRLQQPRLSLQGHPTDLQTSNVKNEEKLRRSLPNLSRTSNTQVDSVKSSRSDSNFQVPNGGIPRMQPQASARTASAAGLLY LHTWAAAVSGCVFAIFTASMWPQTLGHLINSGTNPGKTMTIAMIFYLLEIFFCAWCTAFKFVPGGVYARERSDVLLGTMMLIIGLNMLFG PKKNLDLLLQTKNSSKVLFRKSEKYMKLFLWLLVGVGLLGLGLRHKAYERKLGKVAPTKEVSAAIWPFRFGYDNEGWSSLERSAHLLNET GADFITILESDASKPYMGNNDLTMWLGEKLGFYTDFGPSTRYHTWGIMALSRYPIVKSEHHLLPSPEGEIAPAITLTVNISGKLVDFVVT HFGNHEDDLDRKLQAIAVSKLLKSSSNQVIFLGYITSAPGSRDYLQLTEHGNVKDIDSTDHDRWCEYIMYRGLIRLGYARISHAELSDSE |
| * Fusion transcript sequences (only coding sequence (CDS) region). |
| >In-frame_SLAIN2_ENST00000264313_chr4_48385801_+_CWH43_ENST00000226432_chr4_49005752_+_2658nt ATGGAGGACGTTAACTCCAACGTGAACGCGGACCAGGAGGTGCGGAAGCTGCAGGAGCTGGTGAAGAAGCTGGAGAAGCAGAACGAACAG CTGAGGAGCCGCTCGGGGGCCGTGCAGGGCGCCGGCTCCCTTGGGCCCGGCAGCCCGGTTCGGGCCGGCGCGTCCATTCCCTCCTCCGGC GCGGCGTCTCCTCGGGGCTTCCCCTTGGGCCTCAGCGCCAAGTCGGGCGGCGGGCCCGGGTCGGGCCCGAGGCGGACGAGTAGCGAAGAG CTGCGGGACGCCACCTCCTTGCTAGCGGCGGGCGAGGGCGGCTTGCTGGACGAGGTGGAGCCGCTGCGGCCCGACGAGCTGGAGCGCCTG TCAGGCTGGGAGGAGGAGGAGGAGAGCTGGCTGTATTCATCACCAAAGAAAAAACTTACACCAATGCAGAAATCGGTTAGTCCATTAGTT TGGTGCAGGCAAGTTTTGGATTACCCAAGTCCTGATGTTGAGTGTGCTAAAAAATCTCTTATCCACAAACTTGATCAAACTATGTCAGCT CTCAAGAGGCAGAATTTATATAATAATCCTTTCAACTCTATGAGTTACACCAGTCCTTACAGTCCAAATGCCAGTAGCCCATACAGCAGT GGCTTCAATTCTCCATCCTCAACCCCAGTGCGACCTCCTATAGTCAAACAGCTTATACTTCCTGGAAATTCAGGTAACTTGAAAAGCTCA GACAGAAATCCTCCACTCAGTCCTCAGTCCTCTATAGATAGTGAGTTAAGTGCTTCAGAATTAGATGAAGATTCAATTGGATCCAATTAT AAGCTAAATGATGTAACTGATGTACAGATTCTAGCCCGGATGCAGGAAGAAAGTCTCCGGCAAGAATATGCAGCCACCACGTCTCGGCGC AGTTCTGGTTCATCTTGCAATTCTACAAGACGGGGTACTTTTAGTGATCAGGAACTTGATGCACAAAGTTTAGATGATGAAGATGACAAT ATGCATCATGCAGTATACCCTGCTGTTAACAGGTTTTCACCATCACCACGCAATTCACCTCGACCGTCACCTAAGCAGTCACCCAGAAAT TCACCTCGTTCACGATCTCCTGCTCGGGGAATAGAATATAGTAGAGTGTCCCCACAGCCTATGATTAGCCGCTTACAGCAACCTCGCCTT TCACTTCAAGGCCATCCCACAGATTTACAGACAAGCAATGTTAAAAATGAAGAAAAACTAAGACGCAGTCTTCCAAACCTGTCCCGAACA TCTAATACACAAGTTGACTCAGTGAAAAGCAGCAGAAGTGACTCAAATTTTCAAGTGCCAAACGGAGGAATACCTCGTATGCAACCTCAG GCTTCAGCCAGAACAGCTTCAGCTGCGGGGCTCCTTTACCTGCACACATGGGCAGCTGCTGTGTCTGGCTGTGTCTTCGCCATCTTTACT GCATCCATGTGGCCCCAAACACTTGGACACCTTATTAACTCAGGGACAAACCCTGGGAAAACCATGACCATTGCCATGATATTTTATCTT CTAGAAATATTTTTCTGTGCCTGGTGCACAGCTTTTAAGTTTGTCCCAGGAGGTGTCTACGCTAGAGAAAGATCAGATGTGCTTTTGGGG ACAATGATGTTAATTATCGGGCTGAATATGCTATTTGGTCCTAAGAAAAACCTTGACTTGCTTCTTCAAACAAAAAACAGTTCTAAAGTG CTTTTCAGAAAGAGTGAAAAATACATGAAACTTTTTCTGTGGCTGCTTGTTGGTGTGGGATTGTTGGGATTAGGACTACGGCATAAAGCC TATGAGAGAAAACTGGGCAAAGTGGCACCAACCAAAGAGGTCTCTGCTGCCATCTGGCCTTTCAGGTTTGGATATGACAATGAAGGGTGG TCTAGTCTAGAAAGATCAGCTCACCTGCTCAATGAAACAGGTGCAGATTTCATAACAATTTTGGAGAGTGATGCTTCTAAGCCCTATATG GGGAACAATGACTTAACCATGTGGCTAGGGGAAAAGTTGGGTTTCTATACAGACTTTGGTCCAAGCACAAGGTATCACACTTGGGGGATT ATGGCTTTGTCAAGATACCCAATTGTGAAATCTGAGCATCACCTTCTTCCGTCACCAGAGGGCGAGATCGCACCAGCCATCACATTGACC GTTAACATTTCGGGCAAGCTGGTGGATTTTGTCGTGACACACTTTGGGAACCACGAAGATGACCTCGACAGGAAACTGCAGGCTATTGCT GTTTCAAAACTACTGAAAAGTAGCTCTAATCAAGTGATATTTCTGGGATATATCACTTCAGCACCTGGCTCCAGAGATTATCTACAGCTC ACTGAACATGGCAATGTGAAGGATATCGACAGCACTGATCATGACAGATGGTGTGAATACATTATGTATCGAGGGCTGATCAGGTTGGGT TATGCAAGAATCTCCCATGCTGAACTGAGTGATTCAGAAATTCAGATGGCAAAATTTAGGATCCCTGATGACCCCACTAATTATAGAGAC AACCAGAAAGTGGTCATAGACCACAGAGAAGTTTCTGAGAAAATTCATTTTAATCCCAGATTTGGATCCTACAAAGAAGGACACAATTAT >In-frame_SLAIN2_ENST00000264313_chr4_48385801_+_CWH43_ENST00000513409_chr4_49005752_+_2658nt ATGGAGGACGTTAACTCCAACGTGAACGCGGACCAGGAGGTGCGGAAGCTGCAGGAGCTGGTGAAGAAGCTGGAGAAGCAGAACGAACAG CTGAGGAGCCGCTCGGGGGCCGTGCAGGGCGCCGGCTCCCTTGGGCCCGGCAGCCCGGTTCGGGCCGGCGCGTCCATTCCCTCCTCCGGC GCGGCGTCTCCTCGGGGCTTCCCCTTGGGCCTCAGCGCCAAGTCGGGCGGCGGGCCCGGGTCGGGCCCGAGGCGGACGAGTAGCGAAGAG CTGCGGGACGCCACCTCCTTGCTAGCGGCGGGCGAGGGCGGCTTGCTGGACGAGGTGGAGCCGCTGCGGCCCGACGAGCTGGAGCGCCTG TCAGGCTGGGAGGAGGAGGAGGAGAGCTGGCTGTATTCATCACCAAAGAAAAAACTTACACCAATGCAGAAATCGGTTAGTCCATTAGTT TGGTGCAGGCAAGTTTTGGATTACCCAAGTCCTGATGTTGAGTGTGCTAAAAAATCTCTTATCCACAAACTTGATCAAACTATGTCAGCT CTCAAGAGGCAGAATTTATATAATAATCCTTTCAACTCTATGAGTTACACCAGTCCTTACAGTCCAAATGCCAGTAGCCCATACAGCAGT GGCTTCAATTCTCCATCCTCAACCCCAGTGCGACCTCCTATAGTCAAACAGCTTATACTTCCTGGAAATTCAGGTAACTTGAAAAGCTCA GACAGAAATCCTCCACTCAGTCCTCAGTCCTCTATAGATAGTGAGTTAAGTGCTTCAGAATTAGATGAAGATTCAATTGGATCCAATTAT AAGCTAAATGATGTAACTGATGTACAGATTCTAGCCCGGATGCAGGAAGAAAGTCTCCGGCAAGAATATGCAGCCACCACGTCTCGGCGC AGTTCTGGTTCATCTTGCAATTCTACAAGACGGGGTACTTTTAGTGATCAGGAACTTGATGCACAAAGTTTAGATGATGAAGATGACAAT ATGCATCATGCAGTATACCCTGCTGTTAACAGGTTTTCACCATCACCACGCAATTCACCTCGACCGTCACCTAAGCAGTCACCCAGAAAT TCACCTCGTTCACGATCTCCTGCTCGGGGAATAGAATATAGTAGAGTGTCCCCACAGCCTATGATTAGCCGCTTACAGCAACCTCGCCTT TCACTTCAAGGCCATCCCACAGATTTACAGACAAGCAATGTTAAAAATGAAGAAAAACTAAGACGCAGTCTTCCAAACCTGTCCCGAACA TCTAATACACAAGTTGACTCAGTGAAAAGCAGCAGAAGTGACTCAAATTTTCAAGTGCCAAACGGAGGAATACCTCGTATGCAACCTCAG GCTTCAGCCAGAACAGCTTCAGCTGCGGGGCTCCTTTACCTGCACACATGGGCAGCTGCTGTGTCTGGCTGTGTCTTCGCCATCTTTACT GCATCCATGTGGCCCCAAACACTTGGACACCTTATTAACTCAGGGACAAACCCTGGGAAAACCATGACCATTGCCATGATATTTTATCTT CTAGAAATATTTTTCTGTGCCTGGTGCACAGCTTTTAAGTTTGTCCCAGGAGGTGTCTACGCTAGAGAAAGATCAGATGTGCTTTTGGGG ACAATGATGTTAATTATCGGGCTGAATATGCTATTTGGTCCTAAGAAAAACCTTGACTTGCTTCTTCAAACAAAAAACAGTTCTAAAGTG CTTTTCAGAAAGAGTGAAAAATACATGAAACTTTTTCTGTGGCTGCTTGTTGGTGTGGGATTGTTGGGATTAGGACTACGGCATAAAGCC TATGAGAGAAAACTGGGCAAAGTGGCACCAACCAAAGAGGTCTCTGCTGCCATCTGGCCTTTCAGGTTTGGATATGACAATGAAGGGTGG TCTAGTCTAGAAAGATCAGCTCACCTGCTCAATGAAACAGGTGCAGATTTCATAACAATTTTGGAGAGTGATGCTTCTAAGCCCTATATG GGGAACAATGACTTAACCATGTGGCTAGGGGAAAAGTTGGGTTTCTATACAGACTTTGGTCCAAGCACAAGGTATCACACTTGGGGGATT ATGGCTTTGTCAAGATACCCAATTGTGAAATCTGAGCATCACCTTCTTCCGTCACCAGAGGGCGAGATCGCACCAGCCATCACATTGACC GTTAACATTTCGGGCAAGCTGGTGGATTTTGTCGTGACACACTTTGGGAACCACGAAGATGACCTCGACAGGAAACTGCAGGCTATTGCT GTTTCAAAACTACTGAAAAGTAGCTCTAATCAAGTGATATTTCTGGGATATATCACTTCAGCACCTGGCTCCAGAGATTATCTACAGCTC ACTGAACATGGCAATGTGAAGGATATCGACAGCACTGATCATGACAGATGGTGTGAATACATTATGTATCGAGGGCTGATCAGGTTGGGT TATGCAAGAATCTCCCATGCTGAACTGAGTGATTCAGAAATTCAGATGGCAAAATTTAGGATCCCTGATGACCCCACTAATTATAGAGAC AACCAGAAAGTGGTCATAGACCACAGAGAAGTTTCTGAGAAAATTCATTTTAATCCCAGATTTGGATCCTACAAAGAAGGACACAATTAT >In-frame_SLAIN2_ENST00000512093_chr4_48385801_+_CWH43_ENST00000226432_chr4_49005752_+_2079nt ATGAGTTACACCAGTCCTTACAGTCCAAATGCCAGTAGCCCATACAGCAGTGGCTTCAATTCTCCATCCTCAACCCCAGTGCGACCTCCT ATAGTCAAACAGCTTATACTTCCTGGAAATTCAGGTAACTTGAAAAGCTCAGACAGAAATCCTCCACTCAGTCCTCAGTCCTCTATAGAT AGTGAGTTAAGTGCTTCAGAATTAGATGAAGATTCAATTGGATCCAATTATAAGCTAAATGATGTAACTGATGTACAGATTCTAGCCCGG ATGCAGGAAGAAAGTCTCCGGCAAGAATATGCAGCCACCACGTCTCGGCGCAGTTCTGGTTCATCTTGCAATTCTACAAGACGGGGTACT TTTAGTGATCAGGAACTTGATGCACAAAGTTTAGATGATGAAGATGACAATATGCATCATGCAGTATACCCTGCTGTTAACAGGTTTTCA CCATCACCACGCAATTCACCTCGACCGTCACCTAAGCAGTCACCCAGAAATTCACCTCGTTCACGATCTCCTGCTCGGGGAATAGAATAT AGTAGAGTGTCCCCACAGCCTATGATTAGCCGCTTACAGCAACCTCGCCTTTCACTTCAAGGCCATCCCACAGATTTACAGACAAGCAAT GTTAAAAATGAAGAAAAACTAAGACGCAGTCTTCCAAACCTGTCCCGAACATCTAATACACAAGTTGACTCAGTGAAAAGCAGCAGAAGT GACTCAAATTTTCAAGTGCCAAACGGAGGAATACCTCGTATGCAACCTCAGGCTTCAGCCAGAACAGCTTCAGCTGCGGGGCTCCTTTAC CTGCACACATGGGCAGCTGCTGTGTCTGGCTGTGTCTTCGCCATCTTTACTGCATCCATGTGGCCCCAAACACTTGGACACCTTATTAAC TCAGGGACAAACCCTGGGAAAACCATGACCATTGCCATGATATTTTATCTTCTAGAAATATTTTTCTGTGCCTGGTGCACAGCTTTTAAG TTTGTCCCAGGAGGTGTCTACGCTAGAGAAAGATCAGATGTGCTTTTGGGGACAATGATGTTAATTATCGGGCTGAATATGCTATTTGGT CCTAAGAAAAACCTTGACTTGCTTCTTCAAACAAAAAACAGTTCTAAAGTGCTTTTCAGAAAGAGTGAAAAATACATGAAACTTTTTCTG TGGCTGCTTGTTGGTGTGGGATTGTTGGGATTAGGACTACGGCATAAAGCCTATGAGAGAAAACTGGGCAAAGTGGCACCAACCAAAGAG GTCTCTGCTGCCATCTGGCCTTTCAGGTTTGGATATGACAATGAAGGGTGGTCTAGTCTAGAAAGATCAGCTCACCTGCTCAATGAAACA GGTGCAGATTTCATAACAATTTTGGAGAGTGATGCTTCTAAGCCCTATATGGGGAACAATGACTTAACCATGTGGCTAGGGGAAAAGTTG GGTTTCTATACAGACTTTGGTCCAAGCACAAGGTATCACACTTGGGGGATTATGGCTTTGTCAAGATACCCAATTGTGAAATCTGAGCAT CACCTTCTTCCGTCACCAGAGGGCGAGATCGCACCAGCCATCACATTGACCGTTAACATTTCGGGCAAGCTGGTGGATTTTGTCGTGACA CACTTTGGGAACCACGAAGATGACCTCGACAGGAAACTGCAGGCTATTGCTGTTTCAAAACTACTGAAAAGTAGCTCTAATCAAGTGATA TTTCTGGGATATATCACTTCAGCACCTGGCTCCAGAGATTATCTACAGCTCACTGAACATGGCAATGTGAAGGATATCGACAGCACTGAT CATGACAGATGGTGTGAATACATTATGTATCGAGGGCTGATCAGGTTGGGTTATGCAAGAATCTCCCATGCTGAACTGAGTGATTCAGAA ATTCAGATGGCAAAATTTAGGATCCCTGATGACCCCACTAATTATAGAGACAACCAGAAAGTGGTCATAGACCACAGAGAAGTTTCTGAG AAAATTCATTTTAATCCCAGATTTGGATCCTACAAAGAAGGACACAATTATGAAAACAACCATCATTTTCATATGAATACTCCCAAATAC >In-frame_SLAIN2_ENST00000512093_chr4_48385801_+_CWH43_ENST00000513409_chr4_49005752_+_2079nt ATGAGTTACACCAGTCCTTACAGTCCAAATGCCAGTAGCCCATACAGCAGTGGCTTCAATTCTCCATCCTCAACCCCAGTGCGACCTCCT ATAGTCAAACAGCTTATACTTCCTGGAAATTCAGGTAACTTGAAAAGCTCAGACAGAAATCCTCCACTCAGTCCTCAGTCCTCTATAGAT AGTGAGTTAAGTGCTTCAGAATTAGATGAAGATTCAATTGGATCCAATTATAAGCTAAATGATGTAACTGATGTACAGATTCTAGCCCGG ATGCAGGAAGAAAGTCTCCGGCAAGAATATGCAGCCACCACGTCTCGGCGCAGTTCTGGTTCATCTTGCAATTCTACAAGACGGGGTACT TTTAGTGATCAGGAACTTGATGCACAAAGTTTAGATGATGAAGATGACAATATGCATCATGCAGTATACCCTGCTGTTAACAGGTTTTCA CCATCACCACGCAATTCACCTCGACCGTCACCTAAGCAGTCACCCAGAAATTCACCTCGTTCACGATCTCCTGCTCGGGGAATAGAATAT AGTAGAGTGTCCCCACAGCCTATGATTAGCCGCTTACAGCAACCTCGCCTTTCACTTCAAGGCCATCCCACAGATTTACAGACAAGCAAT GTTAAAAATGAAGAAAAACTAAGACGCAGTCTTCCAAACCTGTCCCGAACATCTAATACACAAGTTGACTCAGTGAAAAGCAGCAGAAGT GACTCAAATTTTCAAGTGCCAAACGGAGGAATACCTCGTATGCAACCTCAGGCTTCAGCCAGAACAGCTTCAGCTGCGGGGCTCCTTTAC CTGCACACATGGGCAGCTGCTGTGTCTGGCTGTGTCTTCGCCATCTTTACTGCATCCATGTGGCCCCAAACACTTGGACACCTTATTAAC TCAGGGACAAACCCTGGGAAAACCATGACCATTGCCATGATATTTTATCTTCTAGAAATATTTTTCTGTGCCTGGTGCACAGCTTTTAAG TTTGTCCCAGGAGGTGTCTACGCTAGAGAAAGATCAGATGTGCTTTTGGGGACAATGATGTTAATTATCGGGCTGAATATGCTATTTGGT CCTAAGAAAAACCTTGACTTGCTTCTTCAAACAAAAAACAGTTCTAAAGTGCTTTTCAGAAAGAGTGAAAAATACATGAAACTTTTTCTG TGGCTGCTTGTTGGTGTGGGATTGTTGGGATTAGGACTACGGCATAAAGCCTATGAGAGAAAACTGGGCAAAGTGGCACCAACCAAAGAG GTCTCTGCTGCCATCTGGCCTTTCAGGTTTGGATATGACAATGAAGGGTGGTCTAGTCTAGAAAGATCAGCTCACCTGCTCAATGAAACA GGTGCAGATTTCATAACAATTTTGGAGAGTGATGCTTCTAAGCCCTATATGGGGAACAATGACTTAACCATGTGGCTAGGGGAAAAGTTG GGTTTCTATACAGACTTTGGTCCAAGCACAAGGTATCACACTTGGGGGATTATGGCTTTGTCAAGATACCCAATTGTGAAATCTGAGCAT CACCTTCTTCCGTCACCAGAGGGCGAGATCGCACCAGCCATCACATTGACCGTTAACATTTCGGGCAAGCTGGTGGATTTTGTCGTGACA CACTTTGGGAACCACGAAGATGACCTCGACAGGAAACTGCAGGCTATTGCTGTTTCAAAACTACTGAAAAGTAGCTCTAATCAAGTGATA TTTCTGGGATATATCACTTCAGCACCTGGCTCCAGAGATTATCTACAGCTCACTGAACATGGCAATGTGAAGGATATCGACAGCACTGAT CATGACAGATGGTGTGAATACATTATGTATCGAGGGCTGATCAGGTTGGGTTATGCAAGAATCTCCCATGCTGAACTGAGTGATTCAGAA ATTCAGATGGCAAAATTTAGGATCCCTGATGACCCCACTAATTATAGAGACAACCAGAAAGTGGTCATAGACCACAGAGAAGTTTCTGAG AAAATTCATTTTAATCCCAGATTTGGATCCTACAAAGAAGGACACAATTATGAAAACAACCATCATTTTCATATGAATACTCCCAAATAC |
| * Fusion transcript sequences (Full-length transcript). |
| >In-frame_SLAIN2_ENST00000264313_chr4_48385801_+_CWH43_ENST00000226432_chr4_49005752_+_3265nt AATCCCCGCCCCTCAAGCACCGGCCCCGCCCCATAGGCCCCGTCCGTGGCCCCGCCCCGCCGCGAGCTGGCGCCGGGTCCTCTCAGCGCC CGCCGGCGGCCGCGTCCACCCCCGACGCTCTGAGGTCACCGACTGGGCCGGCCCGCGGGGGGCGGAGGGACGGAGGGAAGATGGCGGCAG GGGCCGGATATTGGCGCCGCCTCCCCCAATCCCGGAGCCGGCGCAGATGAGGCAGTTCGGCTGGGGCCAGCGGCGCTTTGGAACCCGAGG TGGGGGGACCCTGGCGGTGGGGCCTGGTCCTGCTATATGCCGGCGCCTCGGCTAGAGTGAGCGGCGGCGACGCCTCTTTCCTCCGTCTCT TTCCCTGTCGCTGCGAGAGCGAGCGGGCGGCGGAGGCGGCGGCGGCGGCGGGGCCGGGATGGAGGACGTTAACTCCAACGTGAACGCGGA CCAGGAGGTGCGGAAGCTGCAGGAGCTGGTGAAGAAGCTGGAGAAGCAGAACGAACAGCTGAGGAGCCGCTCGGGGGCCGTGCAGGGCGC CGGCTCCCTTGGGCCCGGCAGCCCGGTTCGGGCCGGCGCGTCCATTCCCTCCTCCGGCGCGGCGTCTCCTCGGGGCTTCCCCTTGGGCCT CAGCGCCAAGTCGGGCGGCGGGCCCGGGTCGGGCCCGAGGCGGACGAGTAGCGAAGAGCTGCGGGACGCCACCTCCTTGCTAGCGGCGGG CGAGGGCGGCTTGCTGGACGAGGTGGAGCCGCTGCGGCCCGACGAGCTGGAGCGCCTGTCAGGCTGGGAGGAGGAGGAGGAGAGCTGGCT GTATTCATCACCAAAGAAAAAACTTACACCAATGCAGAAATCGGTTAGTCCATTAGTTTGGTGCAGGCAAGTTTTGGATTACCCAAGTCC TGATGTTGAGTGTGCTAAAAAATCTCTTATCCACAAACTTGATCAAACTATGTCAGCTCTCAAGAGGCAGAATTTATATAATAATCCTTT CAACTCTATGAGTTACACCAGTCCTTACAGTCCAAATGCCAGTAGCCCATACAGCAGTGGCTTCAATTCTCCATCCTCAACCCCAGTGCG ACCTCCTATAGTCAAACAGCTTATACTTCCTGGAAATTCAGGTAACTTGAAAAGCTCAGACAGAAATCCTCCACTCAGTCCTCAGTCCTC TATAGATAGTGAGTTAAGTGCTTCAGAATTAGATGAAGATTCAATTGGATCCAATTATAAGCTAAATGATGTAACTGATGTACAGATTCT AGCCCGGATGCAGGAAGAAAGTCTCCGGCAAGAATATGCAGCCACCACGTCTCGGCGCAGTTCTGGTTCATCTTGCAATTCTACAAGACG GGGTACTTTTAGTGATCAGGAACTTGATGCACAAAGTTTAGATGATGAAGATGACAATATGCATCATGCAGTATACCCTGCTGTTAACAG GTTTTCACCATCACCACGCAATTCACCTCGACCGTCACCTAAGCAGTCACCCAGAAATTCACCTCGTTCACGATCTCCTGCTCGGGGAAT AGAATATAGTAGAGTGTCCCCACAGCCTATGATTAGCCGCTTACAGCAACCTCGCCTTTCACTTCAAGGCCATCCCACAGATTTACAGAC AAGCAATGTTAAAAATGAAGAAAAACTAAGACGCAGTCTTCCAAACCTGTCCCGAACATCTAATACACAAGTTGACTCAGTGAAAAGCAG CAGAAGTGACTCAAATTTTCAAGTGCCAAACGGAGGAATACCTCGTATGCAACCTCAGGCTTCAGCCAGAACAGCTTCAGCTGCGGGGCT CCTTTACCTGCACACATGGGCAGCTGCTGTGTCTGGCTGTGTCTTCGCCATCTTTACTGCATCCATGTGGCCCCAAACACTTGGACACCT TATTAACTCAGGGACAAACCCTGGGAAAACCATGACCATTGCCATGATATTTTATCTTCTAGAAATATTTTTCTGTGCCTGGTGCACAGC TTTTAAGTTTGTCCCAGGAGGTGTCTACGCTAGAGAAAGATCAGATGTGCTTTTGGGGACAATGATGTTAATTATCGGGCTGAATATGCT ATTTGGTCCTAAGAAAAACCTTGACTTGCTTCTTCAAACAAAAAACAGTTCTAAAGTGCTTTTCAGAAAGAGTGAAAAATACATGAAACT TTTTCTGTGGCTGCTTGTTGGTGTGGGATTGTTGGGATTAGGACTACGGCATAAAGCCTATGAGAGAAAACTGGGCAAAGTGGCACCAAC CAAAGAGGTCTCTGCTGCCATCTGGCCTTTCAGGTTTGGATATGACAATGAAGGGTGGTCTAGTCTAGAAAGATCAGCTCACCTGCTCAA TGAAACAGGTGCAGATTTCATAACAATTTTGGAGAGTGATGCTTCTAAGCCCTATATGGGGAACAATGACTTAACCATGTGGCTAGGGGA AAAGTTGGGTTTCTATACAGACTTTGGTCCAAGCACAAGGTATCACACTTGGGGGATTATGGCTTTGTCAAGATACCCAATTGTGAAATC TGAGCATCACCTTCTTCCGTCACCAGAGGGCGAGATCGCACCAGCCATCACATTGACCGTTAACATTTCGGGCAAGCTGGTGGATTTTGT CGTGACACACTTTGGGAACCACGAAGATGACCTCGACAGGAAACTGCAGGCTATTGCTGTTTCAAAACTACTGAAAAGTAGCTCTAATCA AGTGATATTTCTGGGATATATCACTTCAGCACCTGGCTCCAGAGATTATCTACAGCTCACTGAACATGGCAATGTGAAGGATATCGACAG CACTGATCATGACAGATGGTGTGAATACATTATGTATCGAGGGCTGATCAGGTTGGGTTATGCAAGAATCTCCCATGCTGAACTGAGTGA TTCAGAAATTCAGATGGCAAAATTTAGGATCCCTGATGACCCCACTAATTATAGAGACAACCAGAAAGTGGTCATAGACCACAGAGAAGT TTCTGAGAAAATTCATTTTAATCCCAGATTTGGATCCTACAAAGAAGGACACAATTATGAAAACAACCATCATTTTCATATGAATACTCC CAAATACTTTTTATGAAACATTTAAAACAAGAAGTTATTGGCTGGGAAAATCTAAGAAAAAAAGTATGTAAGATAAAAAGAAGAGATTAA TGAAAGTGGGAAAATACACATGAAGAACCTCAACTTAAAAAACACATGGTATCTATGCAGTGGGAAATTACCTCCATTTGTAAACTATGT >In-frame_SLAIN2_ENST00000264313_chr4_48385801_+_CWH43_ENST00000513409_chr4_49005752_+_3262nt AATCCCCGCCCCTCAAGCACCGGCCCCGCCCCATAGGCCCCGTCCGTGGCCCCGCCCCGCCGCGAGCTGGCGCCGGGTCCTCTCAGCGCC CGCCGGCGGCCGCGTCCACCCCCGACGCTCTGAGGTCACCGACTGGGCCGGCCCGCGGGGGGCGGAGGGACGGAGGGAAGATGGCGGCAG GGGCCGGATATTGGCGCCGCCTCCCCCAATCCCGGAGCCGGCGCAGATGAGGCAGTTCGGCTGGGGCCAGCGGCGCTTTGGAACCCGAGG TGGGGGGACCCTGGCGGTGGGGCCTGGTCCTGCTATATGCCGGCGCCTCGGCTAGAGTGAGCGGCGGCGACGCCTCTTTCCTCCGTCTCT TTCCCTGTCGCTGCGAGAGCGAGCGGGCGGCGGAGGCGGCGGCGGCGGCGGGGCCGGGATGGAGGACGTTAACTCCAACGTGAACGCGGA CCAGGAGGTGCGGAAGCTGCAGGAGCTGGTGAAGAAGCTGGAGAAGCAGAACGAACAGCTGAGGAGCCGCTCGGGGGCCGTGCAGGGCGC CGGCTCCCTTGGGCCCGGCAGCCCGGTTCGGGCCGGCGCGTCCATTCCCTCCTCCGGCGCGGCGTCTCCTCGGGGCTTCCCCTTGGGCCT CAGCGCCAAGTCGGGCGGCGGGCCCGGGTCGGGCCCGAGGCGGACGAGTAGCGAAGAGCTGCGGGACGCCACCTCCTTGCTAGCGGCGGG CGAGGGCGGCTTGCTGGACGAGGTGGAGCCGCTGCGGCCCGACGAGCTGGAGCGCCTGTCAGGCTGGGAGGAGGAGGAGGAGAGCTGGCT GTATTCATCACCAAAGAAAAAACTTACACCAATGCAGAAATCGGTTAGTCCATTAGTTTGGTGCAGGCAAGTTTTGGATTACCCAAGTCC TGATGTTGAGTGTGCTAAAAAATCTCTTATCCACAAACTTGATCAAACTATGTCAGCTCTCAAGAGGCAGAATTTATATAATAATCCTTT CAACTCTATGAGTTACACCAGTCCTTACAGTCCAAATGCCAGTAGCCCATACAGCAGTGGCTTCAATTCTCCATCCTCAACCCCAGTGCG ACCTCCTATAGTCAAACAGCTTATACTTCCTGGAAATTCAGGTAACTTGAAAAGCTCAGACAGAAATCCTCCACTCAGTCCTCAGTCCTC TATAGATAGTGAGTTAAGTGCTTCAGAATTAGATGAAGATTCAATTGGATCCAATTATAAGCTAAATGATGTAACTGATGTACAGATTCT AGCCCGGATGCAGGAAGAAAGTCTCCGGCAAGAATATGCAGCCACCACGTCTCGGCGCAGTTCTGGTTCATCTTGCAATTCTACAAGACG GGGTACTTTTAGTGATCAGGAACTTGATGCACAAAGTTTAGATGATGAAGATGACAATATGCATCATGCAGTATACCCTGCTGTTAACAG GTTTTCACCATCACCACGCAATTCACCTCGACCGTCACCTAAGCAGTCACCCAGAAATTCACCTCGTTCACGATCTCCTGCTCGGGGAAT AGAATATAGTAGAGTGTCCCCACAGCCTATGATTAGCCGCTTACAGCAACCTCGCCTTTCACTTCAAGGCCATCCCACAGATTTACAGAC AAGCAATGTTAAAAATGAAGAAAAACTAAGACGCAGTCTTCCAAACCTGTCCCGAACATCTAATACACAAGTTGACTCAGTGAAAAGCAG CAGAAGTGACTCAAATTTTCAAGTGCCAAACGGAGGAATACCTCGTATGCAACCTCAGGCTTCAGCCAGAACAGCTTCAGCTGCGGGGCT CCTTTACCTGCACACATGGGCAGCTGCTGTGTCTGGCTGTGTCTTCGCCATCTTTACTGCATCCATGTGGCCCCAAACACTTGGACACCT TATTAACTCAGGGACAAACCCTGGGAAAACCATGACCATTGCCATGATATTTTATCTTCTAGAAATATTTTTCTGTGCCTGGTGCACAGC TTTTAAGTTTGTCCCAGGAGGTGTCTACGCTAGAGAAAGATCAGATGTGCTTTTGGGGACAATGATGTTAATTATCGGGCTGAATATGCT ATTTGGTCCTAAGAAAAACCTTGACTTGCTTCTTCAAACAAAAAACAGTTCTAAAGTGCTTTTCAGAAAGAGTGAAAAATACATGAAACT TTTTCTGTGGCTGCTTGTTGGTGTGGGATTGTTGGGATTAGGACTACGGCATAAAGCCTATGAGAGAAAACTGGGCAAAGTGGCACCAAC CAAAGAGGTCTCTGCTGCCATCTGGCCTTTCAGGTTTGGATATGACAATGAAGGGTGGTCTAGTCTAGAAAGATCAGCTCACCTGCTCAA TGAAACAGGTGCAGATTTCATAACAATTTTGGAGAGTGATGCTTCTAAGCCCTATATGGGGAACAATGACTTAACCATGTGGCTAGGGGA AAAGTTGGGTTTCTATACAGACTTTGGTCCAAGCACAAGGTATCACACTTGGGGGATTATGGCTTTGTCAAGATACCCAATTGTGAAATC TGAGCATCACCTTCTTCCGTCACCAGAGGGCGAGATCGCACCAGCCATCACATTGACCGTTAACATTTCGGGCAAGCTGGTGGATTTTGT CGTGACACACTTTGGGAACCACGAAGATGACCTCGACAGGAAACTGCAGGCTATTGCTGTTTCAAAACTACTGAAAAGTAGCTCTAATCA AGTGATATTTCTGGGATATATCACTTCAGCACCTGGCTCCAGAGATTATCTACAGCTCACTGAACATGGCAATGTGAAGGATATCGACAG CACTGATCATGACAGATGGTGTGAATACATTATGTATCGAGGGCTGATCAGGTTGGGTTATGCAAGAATCTCCCATGCTGAACTGAGTGA TTCAGAAATTCAGATGGCAAAATTTAGGATCCCTGATGACCCCACTAATTATAGAGACAACCAGAAAGTGGTCATAGACCACAGAGAAGT TTCTGAGAAAATTCATTTTAATCCCAGATTTGGATCCTACAAAGAAGGACACAATTATGAAAACAACCATCATTTTCATATGAATACTCC CAAATACTTTTTATGAAACATTTAAAACAAGAAGTTATTGGCTGGGAAAATCTAAGAAAAAAAGTATGTAAGATAAAAAGAAGAGATTAA TGAAAGTGGGAAAATACACATGAAGAACCTCAACTTAAAAAACACATGGTATCTATGCAGTGGGAAATTACCTCCATTTGTAAACTATGT >In-frame_SLAIN2_ENST00000512093_chr4_48385801_+_CWH43_ENST00000226432_chr4_49005752_+_2304nt AAGAGGCAGAATTTATATAATAATCCTTTCAACTCTATGAGTTACACCAGTCCTTACAGTCCAAATGCCAGTAGCCCATACAGCAGTGGC TTCAATTCTCCATCCTCAACCCCAGTGCGACCTCCTATAGTCAAACAGCTTATACTTCCTGGAAATTCAGGTAACTTGAAAAGCTCAGAC AGAAATCCTCCACTCAGTCCTCAGTCCTCTATAGATAGTGAGTTAAGTGCTTCAGAATTAGATGAAGATTCAATTGGATCCAATTATAAG CTAAATGATGTAACTGATGTACAGATTCTAGCCCGGATGCAGGAAGAAAGTCTCCGGCAAGAATATGCAGCCACCACGTCTCGGCGCAGT TCTGGTTCATCTTGCAATTCTACAAGACGGGGTACTTTTAGTGATCAGGAACTTGATGCACAAAGTTTAGATGATGAAGATGACAATATG CATCATGCAGTATACCCTGCTGTTAACAGGTTTTCACCATCACCACGCAATTCACCTCGACCGTCACCTAAGCAGTCACCCAGAAATTCA CCTCGTTCACGATCTCCTGCTCGGGGAATAGAATATAGTAGAGTGTCCCCACAGCCTATGATTAGCCGCTTACAGCAACCTCGCCTTTCA CTTCAAGGCCATCCCACAGATTTACAGACAAGCAATGTTAAAAATGAAGAAAAACTAAGACGCAGTCTTCCAAACCTGTCCCGAACATCT AATACACAAGTTGACTCAGTGAAAAGCAGCAGAAGTGACTCAAATTTTCAAGTGCCAAACGGAGGAATACCTCGTATGCAACCTCAGGCT TCAGCCAGAACAGCTTCAGCTGCGGGGCTCCTTTACCTGCACACATGGGCAGCTGCTGTGTCTGGCTGTGTCTTCGCCATCTTTACTGCA TCCATGTGGCCCCAAACACTTGGACACCTTATTAACTCAGGGACAAACCCTGGGAAAACCATGACCATTGCCATGATATTTTATCTTCTA GAAATATTTTTCTGTGCCTGGTGCACAGCTTTTAAGTTTGTCCCAGGAGGTGTCTACGCTAGAGAAAGATCAGATGTGCTTTTGGGGACA ATGATGTTAATTATCGGGCTGAATATGCTATTTGGTCCTAAGAAAAACCTTGACTTGCTTCTTCAAACAAAAAACAGTTCTAAAGTGCTT TTCAGAAAGAGTGAAAAATACATGAAACTTTTTCTGTGGCTGCTTGTTGGTGTGGGATTGTTGGGATTAGGACTACGGCATAAAGCCTAT GAGAGAAAACTGGGCAAAGTGGCACCAACCAAAGAGGTCTCTGCTGCCATCTGGCCTTTCAGGTTTGGATATGACAATGAAGGGTGGTCT AGTCTAGAAAGATCAGCTCACCTGCTCAATGAAACAGGTGCAGATTTCATAACAATTTTGGAGAGTGATGCTTCTAAGCCCTATATGGGG AACAATGACTTAACCATGTGGCTAGGGGAAAAGTTGGGTTTCTATACAGACTTTGGTCCAAGCACAAGGTATCACACTTGGGGGATTATG GCTTTGTCAAGATACCCAATTGTGAAATCTGAGCATCACCTTCTTCCGTCACCAGAGGGCGAGATCGCACCAGCCATCACATTGACCGTT AACATTTCGGGCAAGCTGGTGGATTTTGTCGTGACACACTTTGGGAACCACGAAGATGACCTCGACAGGAAACTGCAGGCTATTGCTGTT TCAAAACTACTGAAAAGTAGCTCTAATCAAGTGATATTTCTGGGATATATCACTTCAGCACCTGGCTCCAGAGATTATCTACAGCTCACT GAACATGGCAATGTGAAGGATATCGACAGCACTGATCATGACAGATGGTGTGAATACATTATGTATCGAGGGCTGATCAGGTTGGGTTAT GCAAGAATCTCCCATGCTGAACTGAGTGATTCAGAAATTCAGATGGCAAAATTTAGGATCCCTGATGACCCCACTAATTATAGAGACAAC CAGAAAGTGGTCATAGACCACAGAGAAGTTTCTGAGAAAATTCATTTTAATCCCAGATTTGGATCCTACAAAGAAGGACACAATTATGAA AACAACCATCATTTTCATATGAATACTCCCAAATACTTTTTATGAAACATTTAAAACAAGAAGTTATTGGCTGGGAAAATCTAAGAAAAA AAGTATGTAAGATAAAAAGAAGAGATTAATGAAAGTGGGAAAATACACATGAAGAACCTCAACTTAAAAAACACATGGTATCTATGCAGT >In-frame_SLAIN2_ENST00000512093_chr4_48385801_+_CWH43_ENST00000513409_chr4_49005752_+_2301nt AAGAGGCAGAATTTATATAATAATCCTTTCAACTCTATGAGTTACACCAGTCCTTACAGTCCAAATGCCAGTAGCCCATACAGCAGTGGC TTCAATTCTCCATCCTCAACCCCAGTGCGACCTCCTATAGTCAAACAGCTTATACTTCCTGGAAATTCAGGTAACTTGAAAAGCTCAGAC AGAAATCCTCCACTCAGTCCTCAGTCCTCTATAGATAGTGAGTTAAGTGCTTCAGAATTAGATGAAGATTCAATTGGATCCAATTATAAG CTAAATGATGTAACTGATGTACAGATTCTAGCCCGGATGCAGGAAGAAAGTCTCCGGCAAGAATATGCAGCCACCACGTCTCGGCGCAGT TCTGGTTCATCTTGCAATTCTACAAGACGGGGTACTTTTAGTGATCAGGAACTTGATGCACAAAGTTTAGATGATGAAGATGACAATATG CATCATGCAGTATACCCTGCTGTTAACAGGTTTTCACCATCACCACGCAATTCACCTCGACCGTCACCTAAGCAGTCACCCAGAAATTCA CCTCGTTCACGATCTCCTGCTCGGGGAATAGAATATAGTAGAGTGTCCCCACAGCCTATGATTAGCCGCTTACAGCAACCTCGCCTTTCA CTTCAAGGCCATCCCACAGATTTACAGACAAGCAATGTTAAAAATGAAGAAAAACTAAGACGCAGTCTTCCAAACCTGTCCCGAACATCT AATACACAAGTTGACTCAGTGAAAAGCAGCAGAAGTGACTCAAATTTTCAAGTGCCAAACGGAGGAATACCTCGTATGCAACCTCAGGCT TCAGCCAGAACAGCTTCAGCTGCGGGGCTCCTTTACCTGCACACATGGGCAGCTGCTGTGTCTGGCTGTGTCTTCGCCATCTTTACTGCA TCCATGTGGCCCCAAACACTTGGACACCTTATTAACTCAGGGACAAACCCTGGGAAAACCATGACCATTGCCATGATATTTTATCTTCTA GAAATATTTTTCTGTGCCTGGTGCACAGCTTTTAAGTTTGTCCCAGGAGGTGTCTACGCTAGAGAAAGATCAGATGTGCTTTTGGGGACA ATGATGTTAATTATCGGGCTGAATATGCTATTTGGTCCTAAGAAAAACCTTGACTTGCTTCTTCAAACAAAAAACAGTTCTAAAGTGCTT TTCAGAAAGAGTGAAAAATACATGAAACTTTTTCTGTGGCTGCTTGTTGGTGTGGGATTGTTGGGATTAGGACTACGGCATAAAGCCTAT GAGAGAAAACTGGGCAAAGTGGCACCAACCAAAGAGGTCTCTGCTGCCATCTGGCCTTTCAGGTTTGGATATGACAATGAAGGGTGGTCT AGTCTAGAAAGATCAGCTCACCTGCTCAATGAAACAGGTGCAGATTTCATAACAATTTTGGAGAGTGATGCTTCTAAGCCCTATATGGGG AACAATGACTTAACCATGTGGCTAGGGGAAAAGTTGGGTTTCTATACAGACTTTGGTCCAAGCACAAGGTATCACACTTGGGGGATTATG GCTTTGTCAAGATACCCAATTGTGAAATCTGAGCATCACCTTCTTCCGTCACCAGAGGGCGAGATCGCACCAGCCATCACATTGACCGTT AACATTTCGGGCAAGCTGGTGGATTTTGTCGTGACACACTTTGGGAACCACGAAGATGACCTCGACAGGAAACTGCAGGCTATTGCTGTT TCAAAACTACTGAAAAGTAGCTCTAATCAAGTGATATTTCTGGGATATATCACTTCAGCACCTGGCTCCAGAGATTATCTACAGCTCACT GAACATGGCAATGTGAAGGATATCGACAGCACTGATCATGACAGATGGTGTGAATACATTATGTATCGAGGGCTGATCAGGTTGGGTTAT GCAAGAATCTCCCATGCTGAACTGAGTGATTCAGAAATTCAGATGGCAAAATTTAGGATCCCTGATGACCCCACTAATTATAGAGACAAC CAGAAAGTGGTCATAGACCACAGAGAAGTTTCTGAGAAAATTCATTTTAATCCCAGATTTGGATCCTACAAAGAAGGACACAATTATGAA AACAACCATCATTTTCATATGAATACTCCCAAATACTTTTTATGAAACATTTAAAACAAGAAGTTATTGGCTGGGAAAATCTAAGAAAAA AAGTATGTAAGATAAAAAGAAGAGATTAATGAAAGTGGGAAAATACACATGAAGAACCTCAACTTAAAAAACACATGGTATCTATGCAGT |
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FusionGenePPI for SLAIN2_CWH43 |
| Go to ChiPPI (Chimeric Protein-Protein interactions) to see the chimeric PPI interaction in . |
| Protein-protein interactors with each fusion partner protein in wild-type (BIOGRID-3.4.160) |
| Hgene | Hgene's interactors | Tgene | Tgene's interactors |
| SLAIN2 | CKAP5, SH3KBP1, APP, LRRC16A, KLC2, COPS2, GRB2, NPM1, SRPK2, SRPK1, BRCA1, CEP170, CEP128, CNTRL, DCTN1, POC1A, XPO1, HIST1H3E, ADRBK1, JARID2, P4HA1, PCM1, TRIM27, FXR1, YBX3, FXR2, TRIB1, TACC3, APPBP2, TACC2, SRSF10, CEP131, MYCBP2, NNT, PRDX5, SS18L2, WAC, FOCAD, RNF20, MAGEA10, CDT1, YTHDC1, TARSL2, FOPNL, LYSMD2, MZT2A, CCDC61, SMURF1, TTC19, PCDHA10, CYLD | CWH43 |
| - Retained PPIs in in-frame fusion. |
| Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Still interaction with |
| - Lost PPIs in in-frame fusion. |
| Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Interaction lost with |
| - Retained PPIs, but lost function due to frame-shift fusion. |
| Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Interaction lost with |
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RelatedDrugs for SLAIN2_CWH43 |
| Drugs targeting genes involved in this fusion gene. (DrugBank Version 5.1.0 2018-04-02) |
| Partner | Gene | UniProtAcc | DrugBank ID | Drug name | Drug activity | Drug type | Drug status |
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RelatedDiseases for SLAIN2_CWH43 |
| Diseases associated with fusion partners. (DisGeNet 4.0) |
| Partner | Gene | Disease ID | Disease name | # pubmeds | Source |
Copyright 2018-Present -The University of Texas Health Science Center at Houston (UTHealth)
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