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Fusion gene ID: 33954 |
FusionGeneSummary for SKAP1_SP2 |
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Fusion gene information | Fusion gene name: SKAP1_SP2 | Fusion gene ID: 33954 | Hgene | Tgene | Gene symbol | SKAP1 | SP2 | Gene ID | 8631 | 6668 |
Gene name | src kinase associated phosphoprotein 1 | Sp2 transcription factor | |
Synonyms | HEL-S-81p|SCAP1|SKAP55 | - | |
Cytomap | 17q21.32 | 17q21.32 | |
Type of gene | protein-coding | protein-coding | |
Description | src kinase-associated phosphoprotein 1SKAP-55epididymis secretory sperm binding protein Li 81ppp55src family-associated phosphoprotein 1src kinase-associated phosphoprotein of 55 kDa | transcription factor Sp2 | |
Modification date | 20180523 | 20180523 | |
UniProtAcc | Q86WV1 | Q02086 | |
Ensembl transtripts involved in fusion gene | ENST00000336915, ENST00000584924, | ENST00000376741, | |
Fusion gene scores | * DoF score | 16 X 4 X 7=448 | 8 X 5 X 6=240 |
# samples | 16 | 9 | |
** MAII score | log2(16/448*10)=-1.48542682717024 possibly effective Gene in Pan-Cancer Fusion Genes (peGinPCFGs). DoF>8 and MAII<0 | log2(9/240*10)=-1.41503749927884 possibly effective Gene in Pan-Cancer Fusion Genes (peGinPCFGs). DoF>8 and MAII<0 | |
Context | PubMed: SKAP1 [Title/Abstract] AND SP2 [Title/Abstract] AND fusion [Title/Abstract] | ||
Functional or gene categories assigned by FusionGDB annotation |
* DoF score (Degree of Frequency) = # partners X # break points X # cancer types ** MAII score (Major Active Isofusion Index) = log2(# samples/DoF score*10) |
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Partner | Gene | GO ID | GO term | PubMed ID |
Hgene | SKAP1 | GO:0045944 | positive regulation of transcription by RNA polymerase II | 11909961 |
Tgene | SP2 | GO:0000122 | negative regulation of transcription by RNA polymerase II | 10744779 |
![]() (ChiTars (NAR, 2018), tumorfusions (NAR, 2018), Gao et al. (Cell, 2018)) * All genome coordinats were lifted-over on hg19. * Click on the break point to see the gene structure around the break point region using the UCSC Genome Browser. |
Data type | Source | Cancer type | Sample | Hgene | Hchr | Hbp | Hstrand | Tgene | Tchr | Tbp | Tstrand |
TCGA | LD | OV | TCGA-24-1549-01A | SKAP1 | chr17 | 46423267 | - | SP2 | chr17 | 45992678 | + |
* LD: Li Ding group's fusion gene list RV: Roel Verhaak group's fusion gene list ChiTaRs fusion database |
![]() * Click on the break point to see the gene structure around the break point region using the UCSC Genome Browser. |
ORF | Henst | Tenst | Hgene | Hchr | Hbp | Hstrand | Tgene | Tchr | Tbp | Tstrand |
In-frame | ENST00000336915 | ENST00000376741 | SKAP1 | chr17 | 46423267 | - | SP2 | chr17 | 45992678 | + |
In-frame | ENST00000584924 | ENST00000376741 | SKAP1 | chr17 | 46423267 | - | SP2 | chr17 | 45992678 | + |
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FusionProtFeatures for SKAP1_SP2 |
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Hgene | Tgene |
SKAP1 | SP2 |
Positively regulates T-cell receptor signaling byenhancing the MAP kinase pathway. Required for optimal conjugationbetween T-cells and antigen-presenting cells by promoting theclustering of integrin ITGAL on the surface of T-cells. May beinvolved in high affinity immunoglobulin epsilon receptorsignaling in mast cells. {ECO:0000269|PubMed:10856234,ECO:0000269|PubMed:11909961, ECO:0000269|PubMed:12652296,ECO:0000269|PubMed:15939789, ECO:0000269|PubMed:16980616}. | Binds to GC box promoters elements and selectivelyactivates mRNA synthesis from genes that contain functionalrecognition sites. |
![]() * Minus value of BPloci means that the break pointn is located before the CDS. |
- In-frame and retained protein feature among the 13 regional features. |
Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Protein feature | Protein feature note |
Tgene | >SP2 | chr17:46423267 | chr17:45992678 | ENST00000376741 | + | 0 | 7 | 525_549 | 2 | 614 | Zinc finger | C2H2-type 1 |
Tgene | >SP2 | chr17:46423267 | chr17:45992678 | ENST00000376741 | + | 0 | 7 | 555_579 | 2 | 614 | Zinc finger | C2H2-type 2 |
Tgene | >SP2 | chr17:46423267 | chr17:45992678 | ENST00000376741 | + | 0 | 7 | 585_607 | 2 | 614 | Zinc finger | C2H2-type 3 |
- In-frame and not-retained protein feature among the 13 regional features. |
Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Protein feature | Protein feature note |
Hgene | >SKAP1 | chr17:46423267 | chr17:45992678 | ENST00000336915 | - | 4 | 13 | 220_230 | 93 | 448 | Compositional bias | Note=Poly-Glu |
Hgene | >SKAP1 | chr17:46423267 | chr17:45992678 | ENST00000584924 | - | 4 | 12 | 220_230 | 93 | 360 | Compositional bias | Note=Poly-Glu |
Hgene | >SKAP1 | chr17:46423267 | chr17:45992678 | ENST00000336915 | - | 4 | 13 | 107_210 | 93 | 448 | Domain | PH |
Hgene | >SKAP1 | chr17:46423267 | chr17:45992678 | ENST00000336915 | - | 4 | 13 | 294_355 | 93 | 448 | Domain | SH3 |
Hgene | >SKAP1 | chr17:46423267 | chr17:45992678 | ENST00000584924 | - | 4 | 12 | 107_210 | 93 | 360 | Domain | PH |
Hgene | >SKAP1 | chr17:46423267 | chr17:45992678 | ENST00000584924 | - | 4 | 12 | 294_355 | 93 | 360 | Domain | SH3 |
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FusionGeneSequence for SKAP1_SP2 |
![]() (nt: nucleotides, aa: amino acids) |
* Fusion amino acid sequences. |
>In-frame_SKAP1_ENST00000336915_chr17_46423267_-_SP2_ENST00000376741_chr17_45992678_+_705aa MQAAALPEEIRWLLEDAEEFLAEGLRNENLSAVARDHRDHILRGFQQIKARYYWDFQPQGGDIGQDSSDDNHSGTLGLSLTSDAPFLSDY QDEDPQTSMAATAAVSPSDYLQPAASTTQDSQPSPLALLAATCSKIGPPAVEAAVTPPAPPQPTPRKLVPIKPAPLPLSPGKNSFGILSS KGNILQIQGSQLSASYPGGQLVFAIQNPTMINKGTRSNANIQYQAVPQIQASNSQTIQVQPNLTNQIQIIPGTNQAIITPSPSSHKPVPI KPAPIQKSSTTTTPVQSGANVVKLTGGGGNVTLTLPVNNLVNASDTGAPTQLLTESPPTPLSKTNKKARKKSLPASQPPVAVAEQVETVL IETTADNIIQAGNNLLIVQSPGGGQPAVVQQVQVVPPKAEQQQVVQIPQQALRVVQAASATLPTVPQKPSQNFQIQAAEPTPTQVYIRTP SGEVQTVLVQDSPPATAAATSNTTCSSPASRAPHLSGTSKKHSAAILRKERPLPKIAPAGSIISLNAAQLAAAAQAMQTININGVQVQGV PVTITNTGGQQQLTVQNVSGNNLTISGLSPTQIQLQMEQALAGETQPGEKRRRMACTCPNCKDGEKRSGEQGKKKHVCHIPDCGKTFRKT >In-frame_SKAP1_ENST00000584924_chr17_46423267_-_SP2_ENST00000376741_chr17_45992678_+_705aa MQAAALPEEIRWLLEDAEEFLAEGLRNENLSAVARDHRDHILRGFQQIKARYYWDFQPQGGDIGQDSSDDNHSGTLGLSLTSDAPFLSDY QDEDPQTSMAATAAVSPSDYLQPAASTTQDSQPSPLALLAATCSKIGPPAVEAAVTPPAPPQPTPRKLVPIKPAPLPLSPGKNSFGILSS KGNILQIQGSQLSASYPGGQLVFAIQNPTMINKGTRSNANIQYQAVPQIQASNSQTIQVQPNLTNQIQIIPGTNQAIITPSPSSHKPVPI KPAPIQKSSTTTTPVQSGANVVKLTGGGGNVTLTLPVNNLVNASDTGAPTQLLTESPPTPLSKTNKKARKKSLPASQPPVAVAEQVETVL IETTADNIIQAGNNLLIVQSPGGGQPAVVQQVQVVPPKAEQQQVVQIPQQALRVVQAASATLPTVPQKPSQNFQIQAAEPTPTQVYIRTP SGEVQTVLVQDSPPATAAATSNTTCSSPASRAPHLSGTSKKHSAAILRKERPLPKIAPAGSIISLNAAQLAAAAQAMQTININGVQVQGV PVTITNTGGQQQLTVQNVSGNNLTISGLSPTQIQLQMEQALAGETQPGEKRRRMACTCPNCKDGEKRSGEQGKKKHVCHIPDCGKTFRKT |
* Fusion transcript sequences (only coding sequence (CDS) region). |
>In-frame_SKAP1_ENST00000336915_chr17_46423267_-_SP2_ENST00000376741_chr17_45992678_+_2115nt ATGCAGGCCGCCGCCCTCCCTGAGGAGATCCGTTGGCTCCTGGAAGATGCTGAAGAGTTTCTGGCAGAAGGTTTGCGGAATGAGAACCTC AGCGCTGTTGCAAGGGATCACAGAGACCATATTCTACGGGGCTTTCAGCAAATCAAAGCCAGGTACTATTGGGATTTTCAGCCCCAAGGG GGAGACATTGGACAGGACAGCTCTGATGATAATCACAGCGGGACTCTTGGCCTGTCCCTCACATCCGATGCACCCTTTTTGTCAGATTAT CAGGATGAGGATCCACAGACCAGCATGGCTGCCACTGCTGCTGTGAGTCCCAGTGACTACCTGCAGCCTGCCGCCTCCACCACCCAGGAC TCCCAGCCATCTCCCTTAGCCCTGCTTGCTGCAACATGTAGCAAAATTGGCCCTCCAGCAGTTGAAGCTGCTGTGACACCTCCTGCTCCC CCACAGCCCACACCGCGGAAACTTGTCCCTATCAAACCTGCCCCTCTCCCTCTCAGCCCCGGCAAGAATAGCTTTGGAATCTTGTCCTCC AAAGGAAATATACTTCAGATTCAGGGGTCACAACTGAGCGCCTCCTATCCTGGAGGGCAGCTGGTGTTCGCTATCCAGAATCCCACCATG ATCAACAAAGGGACCCGATCAAATGCCAATATCCAGTACCAGGCGGTCCCTCAGATTCAGGCAAGCAATTCCCAAACCATCCAAGTACAG CCCAATCTCACCAACCAGATCCAGATCATCCCTGGCACCAACCAAGCCATCATCACCCCCTCACCGTCCAGTCACAAGCCTGTCCCCATC AAGCCAGCCCCCATCCAGAAGTCGAGTACGACCACCACCCCCGTGCAGAGCGGGGCCAATGTGGTGAAGCTGACAGGTGGGGGCGGCAAT GTGACGCTCACTCTGCCCGTCAACAACCTTGTGAACGCCAGTGACACCGGGGCCCCTACTCAGCTCCTCACTGAAAGCCCCCCAACCCCG CTGTCTAAGACTAACAAGAAAGCAAGGAAGAAGAGCCTTCCTGCCTCCCAGCCCCCTGTGGCTGTGGCTGAGCAGGTGGAGACGGTGCTG ATCGAGACCACCGCGGACAACATCATCCAGGCAGGAAATAACCTGCTCATTGTTCAGAGCCCTGGTGGGGGCCAGCCAGCTGTGGTCCAG CAGGTCCAGGTGGTGCCCCCCAAGGCCGAGCAGCAGCAGGTGGTACAGATCCCCCAGCAGGCTCTGCGGGTGGTGCAGGCGGCATCTGCC ACCCTCCCCACTGTACCCCAGAAGCCCTCCCAGAACTTTCAGATCCAGGCAGCTGAGCCGACACCTACTCAGGTCTACATCCGCACGCCT TCCGGTGAGGTGCAGACAGTCCTTGTCCAGGACAGCCCCCCAGCAACAGCTGCAGCCACCTCTAACACCACCTGTAGCAGCCCTGCATCC CGTGCTCCCCATCTGAGTGGGACCAGCAAAAAGCACTCAGCTGCAATTCTCCGAAAAGAGCGTCCCCTGCCAAAGATTGCCCCAGCCGGG AGCATCATCAGCCTGAATGCAGCCCAGTTGGCGGCAGCTGCCCAGGCAATGCAGACCATCAACATCAATGGTGTCCAGGTCCAGGGCGTG CCTGTCACCATCACCAACACAGGCGGGCAGCAGCAGCTGACAGTGCAGAATGTTTCTGGGAACAACCTGACCATCAGTGGGCTGAGCCCC ACCCAGATCCAGCTGCAAATGGAACAAGCCCTGGCCGGAGAGACCCAGCCCGGGGAGAAGCGGCGCCGCATGGCCTGCACGTGTCCCAAC TGCAAGGATGGGGAGAAGAGGTCTGGAGAGCAGGGCAAGAAGAAGCACGTGTGCCACATCCCCGACTGTGGCAAGACGTTCCGTAAGACG TCCTTGCTGCGTGCCCATGTGCGCCTGCACACTGGCGAGCGGCCCTTTGTCTGCAACTGGTTCTTCTGTGGGAAGAGGTTCACACGGAGT GACGAGCTCCAACGGCATGCTCGCACCCACACAGGGGACAAACGCTTCGAGTGCGCCCAGTGTCAGAAGCGCTTCATGAGGAGTGACCAC >In-frame_SKAP1_ENST00000584924_chr17_46423267_-_SP2_ENST00000376741_chr17_45992678_+_2115nt ATGCAGGCCGCCGCCCTCCCTGAGGAGATCCGTTGGCTCCTGGAAGATGCTGAAGAGTTTCTGGCAGAAGGTTTGCGGAATGAGAACCTC AGCGCTGTTGCAAGGGATCACAGAGACCATATTCTACGGGGCTTTCAGCAAATCAAAGCCAGGTACTATTGGGATTTTCAGCCCCAAGGG GGAGACATTGGACAGGACAGCTCTGATGATAATCACAGCGGGACTCTTGGCCTGTCCCTCACATCCGATGCACCCTTTTTGTCAGATTAT CAGGATGAGGATCCACAGACCAGCATGGCTGCCACTGCTGCTGTGAGTCCCAGTGACTACCTGCAGCCTGCCGCCTCCACCACCCAGGAC TCCCAGCCATCTCCCTTAGCCCTGCTTGCTGCAACATGTAGCAAAATTGGCCCTCCAGCAGTTGAAGCTGCTGTGACACCTCCTGCTCCC CCACAGCCCACACCGCGGAAACTTGTCCCTATCAAACCTGCCCCTCTCCCTCTCAGCCCCGGCAAGAATAGCTTTGGAATCTTGTCCTCC AAAGGAAATATACTTCAGATTCAGGGGTCACAACTGAGCGCCTCCTATCCTGGAGGGCAGCTGGTGTTCGCTATCCAGAATCCCACCATG ATCAACAAAGGGACCCGATCAAATGCCAATATCCAGTACCAGGCGGTCCCTCAGATTCAGGCAAGCAATTCCCAAACCATCCAAGTACAG CCCAATCTCACCAACCAGATCCAGATCATCCCTGGCACCAACCAAGCCATCATCACCCCCTCACCGTCCAGTCACAAGCCTGTCCCCATC AAGCCAGCCCCCATCCAGAAGTCGAGTACGACCACCACCCCCGTGCAGAGCGGGGCCAATGTGGTGAAGCTGACAGGTGGGGGCGGCAAT GTGACGCTCACTCTGCCCGTCAACAACCTTGTGAACGCCAGTGACACCGGGGCCCCTACTCAGCTCCTCACTGAAAGCCCCCCAACCCCG CTGTCTAAGACTAACAAGAAAGCAAGGAAGAAGAGCCTTCCTGCCTCCCAGCCCCCTGTGGCTGTGGCTGAGCAGGTGGAGACGGTGCTG ATCGAGACCACCGCGGACAACATCATCCAGGCAGGAAATAACCTGCTCATTGTTCAGAGCCCTGGTGGGGGCCAGCCAGCTGTGGTCCAG CAGGTCCAGGTGGTGCCCCCCAAGGCCGAGCAGCAGCAGGTGGTACAGATCCCCCAGCAGGCTCTGCGGGTGGTGCAGGCGGCATCTGCC ACCCTCCCCACTGTACCCCAGAAGCCCTCCCAGAACTTTCAGATCCAGGCAGCTGAGCCGACACCTACTCAGGTCTACATCCGCACGCCT TCCGGTGAGGTGCAGACAGTCCTTGTCCAGGACAGCCCCCCAGCAACAGCTGCAGCCACCTCTAACACCACCTGTAGCAGCCCTGCATCC CGTGCTCCCCATCTGAGTGGGACCAGCAAAAAGCACTCAGCTGCAATTCTCCGAAAAGAGCGTCCCCTGCCAAAGATTGCCCCAGCCGGG AGCATCATCAGCCTGAATGCAGCCCAGTTGGCGGCAGCTGCCCAGGCAATGCAGACCATCAACATCAATGGTGTCCAGGTCCAGGGCGTG CCTGTCACCATCACCAACACAGGCGGGCAGCAGCAGCTGACAGTGCAGAATGTTTCTGGGAACAACCTGACCATCAGTGGGCTGAGCCCC ACCCAGATCCAGCTGCAAATGGAACAAGCCCTGGCCGGAGAGACCCAGCCCGGGGAGAAGCGGCGCCGCATGGCCTGCACGTGTCCCAAC TGCAAGGATGGGGAGAAGAGGTCTGGAGAGCAGGGCAAGAAGAAGCACGTGTGCCACATCCCCGACTGTGGCAAGACGTTCCGTAAGACG TCCTTGCTGCGTGCCCATGTGCGCCTGCACACTGGCGAGCGGCCCTTTGTCTGCAACTGGTTCTTCTGTGGGAAGAGGTTCACACGGAGT GACGAGCTCCAACGGCATGCTCGCACCCACACAGGGGACAAACGCTTCGAGTGCGCCCAGTGTCAGAAGCGCTTCATGAGGAGTGACCAC |
* Fusion transcript sequences (Full-length transcript). |
>In-frame_SKAP1_ENST00000336915_chr17_46423267_-_SP2_ENST00000376741_chr17_45992678_+_3318nt GTCGCCTTCCAGCCCGTCCGCCTCCCGACCAGGGCCCGCGCCCCGTCCCGCCTCTCTCCCGCCCAGCCAAATGCAGGCCGCCGCCCTCCC TGAGGAGATCCGTTGGCTCCTGGAAGATGCTGAAGAGTTTCTGGCAGAAGGTTTGCGGAATGAGAACCTCAGCGCTGTTGCAAGGGATCA CAGAGACCATATTCTACGGGGCTTTCAGCAAATCAAAGCCAGGTACTATTGGGATTTTCAGCCCCAAGGGGGAGACATTGGACAGGACAG CTCTGATGATAATCACAGCGGGACTCTTGGCCTGTCCCTCACATCCGATGCACCCTTTTTGTCAGATTATCAGGATGAGGATCCACAGAC CAGCATGGCTGCCACTGCTGCTGTGAGTCCCAGTGACTACCTGCAGCCTGCCGCCTCCACCACCCAGGACTCCCAGCCATCTCCCTTAGC CCTGCTTGCTGCAACATGTAGCAAAATTGGCCCTCCAGCAGTTGAAGCTGCTGTGACACCTCCTGCTCCCCCACAGCCCACACCGCGGAA ACTTGTCCCTATCAAACCTGCCCCTCTCCCTCTCAGCCCCGGCAAGAATAGCTTTGGAATCTTGTCCTCCAAAGGAAATATACTTCAGAT TCAGGGGTCACAACTGAGCGCCTCCTATCCTGGAGGGCAGCTGGTGTTCGCTATCCAGAATCCCACCATGATCAACAAAGGGACCCGATC AAATGCCAATATCCAGTACCAGGCGGTCCCTCAGATTCAGGCAAGCAATTCCCAAACCATCCAAGTACAGCCCAATCTCACCAACCAGAT CCAGATCATCCCTGGCACCAACCAAGCCATCATCACCCCCTCACCGTCCAGTCACAAGCCTGTCCCCATCAAGCCAGCCCCCATCCAGAA GTCGAGTACGACCACCACCCCCGTGCAGAGCGGGGCCAATGTGGTGAAGCTGACAGGTGGGGGCGGCAATGTGACGCTCACTCTGCCCGT CAACAACCTTGTGAACGCCAGTGACACCGGGGCCCCTACTCAGCTCCTCACTGAAAGCCCCCCAACCCCGCTGTCTAAGACTAACAAGAA AGCAAGGAAGAAGAGCCTTCCTGCCTCCCAGCCCCCTGTGGCTGTGGCTGAGCAGGTGGAGACGGTGCTGATCGAGACCACCGCGGACAA CATCATCCAGGCAGGAAATAACCTGCTCATTGTTCAGAGCCCTGGTGGGGGCCAGCCAGCTGTGGTCCAGCAGGTCCAGGTGGTGCCCCC CAAGGCCGAGCAGCAGCAGGTGGTACAGATCCCCCAGCAGGCTCTGCGGGTGGTGCAGGCGGCATCTGCCACCCTCCCCACTGTACCCCA GAAGCCCTCCCAGAACTTTCAGATCCAGGCAGCTGAGCCGACACCTACTCAGGTCTACATCCGCACGCCTTCCGGTGAGGTGCAGACAGT CCTTGTCCAGGACAGCCCCCCAGCAACAGCTGCAGCCACCTCTAACACCACCTGTAGCAGCCCTGCATCCCGTGCTCCCCATCTGAGTGG GACCAGCAAAAAGCACTCAGCTGCAATTCTCCGAAAAGAGCGTCCCCTGCCAAAGATTGCCCCAGCCGGGAGCATCATCAGCCTGAATGC AGCCCAGTTGGCGGCAGCTGCCCAGGCAATGCAGACCATCAACATCAATGGTGTCCAGGTCCAGGGCGTGCCTGTCACCATCACCAACAC AGGCGGGCAGCAGCAGCTGACAGTGCAGAATGTTTCTGGGAACAACCTGACCATCAGTGGGCTGAGCCCCACCCAGATCCAGCTGCAAAT GGAACAAGCCCTGGCCGGAGAGACCCAGCCCGGGGAGAAGCGGCGCCGCATGGCCTGCACGTGTCCCAACTGCAAGGATGGGGAGAAGAG GTCTGGAGAGCAGGGCAAGAAGAAGCACGTGTGCCACATCCCCGACTGTGGCAAGACGTTCCGTAAGACGTCCTTGCTGCGTGCCCATGT GCGCCTGCACACTGGCGAGCGGCCCTTTGTCTGCAACTGGTTCTTCTGTGGGAAGAGGTTCACACGGAGTGACGAGCTCCAACGGCATGC TCGCACCCACACAGGGGACAAACGCTTCGAGTGCGCCCAGTGTCAGAAGCGCTTCATGAGGAGTGACCACCTCACCAAGCATTACAAGAC CCACCTGGTCACGAAGAACTTGTAAGGCCAACTGCGGCGGGAGGCCCTGAAGATGCAGTCCCCCACCTGTGTCCTCCCTGGGCCCCTGGT GGAAAGGAGCCCTGTGGCTGCCTTGGGCCTGCCCTCAGCCCCACTCCTGTTCTGCAACTGTCCCCACAGGAAGGGGCTCTGTTCCCTGTA TTGTCCTCCTTCTGAAGCCCCTTGGCTCTGCCTTGGCCCTTCCCCTCACCACGAGCTCCCGGCCTGCCCAGACTGTGGACACTGGCCGTG CCCAATGAGACGTTCTAAACCAGGACGCGTGGGAACCCTTATTTCCAAAGGAAAAACATGCATTTCACTCCGTCGAGGAGCAAAGTGAGC CCCTACCCCCCACCCCGATCCCCGCTCCCAACACTGCCGGAGTCGCGTCATGCCATGCCCCCTCTCCTGCACCTCCCTGGCCCTGCCGGC CACTGTGGACGCCCTGGGGCTTGGCACCCACCTCTGGAGAAACTCGGGGCCACCTCCACTCCATGTGCCCAGCCCCGCCACAACCTCTCC TCCAGCACATTCCAGCTCTATTTAAAAAGTAAAGACACCCACCGACTCCTGATCCCCCTCTTTTTCTATGGAGAACGTTGCCTTATACTC TACTTCAGATGATGAACACTGTGTACTGTGTGTGCTTTAAAGAAGTTTTATTTAATTGCTCCCTTCTTCCTTTCCTTGTTATTCACCTCC CTGATGCCTGCTTTCAGTTGAGGGTTGGGGGCAATGATGAGCATATGAATTTTTTCTCACTCTAGCAATTCCCTTTTCTAAATGACACAG CATTTAAACTCAAATCTGGATTCAGATAACAGCACCTGCACATCCTGCACCTCCTCCCTCTCCCTTCACCTCACCCCTGCCCGGCCCAAG CTCTACTTGTGTACAGTGTATATTGTATAATAGACAATTGTGTCTACTACATGTTTAAAAACACATTGCTTGTTATTTTTGAGGCTTTTA AATTAAACAAAAATCCAACTTTATTTTTAGTTGTAACTGCTTGAGGTATGTTTTATGAATTAAGTGACAGATTTGTTATCCTTTATTAAC >In-frame_SKAP1_ENST00000584924_chr17_46423267_-_SP2_ENST00000376741_chr17_45992678_+_3347nt GAGGTACAGGTGCCTCGCGGTGCAGCCGGGTCGCCTTCCAGCCCGTCCGCCTCCCGACCAGGGCCCGCGCCCCGTCCCGCCTCTCTCCCG CCCAGCCAAATGCAGGCCGCCGCCCTCCCTGAGGAGATCCGTTGGCTCCTGGAAGATGCTGAAGAGTTTCTGGCAGAAGGTTTGCGGAAT GAGAACCTCAGCGCTGTTGCAAGGGATCACAGAGACCATATTCTACGGGGCTTTCAGCAAATCAAAGCCAGGTACTATTGGGATTTTCAG CCCCAAGGGGGAGACATTGGACAGGACAGCTCTGATGATAATCACAGCGGGACTCTTGGCCTGTCCCTCACATCCGATGCACCCTTTTTG TCAGATTATCAGGATGAGGATCCACAGACCAGCATGGCTGCCACTGCTGCTGTGAGTCCCAGTGACTACCTGCAGCCTGCCGCCTCCACC ACCCAGGACTCCCAGCCATCTCCCTTAGCCCTGCTTGCTGCAACATGTAGCAAAATTGGCCCTCCAGCAGTTGAAGCTGCTGTGACACCT CCTGCTCCCCCACAGCCCACACCGCGGAAACTTGTCCCTATCAAACCTGCCCCTCTCCCTCTCAGCCCCGGCAAGAATAGCTTTGGAATC TTGTCCTCCAAAGGAAATATACTTCAGATTCAGGGGTCACAACTGAGCGCCTCCTATCCTGGAGGGCAGCTGGTGTTCGCTATCCAGAAT CCCACCATGATCAACAAAGGGACCCGATCAAATGCCAATATCCAGTACCAGGCGGTCCCTCAGATTCAGGCAAGCAATTCCCAAACCATC CAAGTACAGCCCAATCTCACCAACCAGATCCAGATCATCCCTGGCACCAACCAAGCCATCATCACCCCCTCACCGTCCAGTCACAAGCCT GTCCCCATCAAGCCAGCCCCCATCCAGAAGTCGAGTACGACCACCACCCCCGTGCAGAGCGGGGCCAATGTGGTGAAGCTGACAGGTGGG GGCGGCAATGTGACGCTCACTCTGCCCGTCAACAACCTTGTGAACGCCAGTGACACCGGGGCCCCTACTCAGCTCCTCACTGAAAGCCCC CCAACCCCGCTGTCTAAGACTAACAAGAAAGCAAGGAAGAAGAGCCTTCCTGCCTCCCAGCCCCCTGTGGCTGTGGCTGAGCAGGTGGAG ACGGTGCTGATCGAGACCACCGCGGACAACATCATCCAGGCAGGAAATAACCTGCTCATTGTTCAGAGCCCTGGTGGGGGCCAGCCAGCT GTGGTCCAGCAGGTCCAGGTGGTGCCCCCCAAGGCCGAGCAGCAGCAGGTGGTACAGATCCCCCAGCAGGCTCTGCGGGTGGTGCAGGCG GCATCTGCCACCCTCCCCACTGTACCCCAGAAGCCCTCCCAGAACTTTCAGATCCAGGCAGCTGAGCCGACACCTACTCAGGTCTACATC CGCACGCCTTCCGGTGAGGTGCAGACAGTCCTTGTCCAGGACAGCCCCCCAGCAACAGCTGCAGCCACCTCTAACACCACCTGTAGCAGC CCTGCATCCCGTGCTCCCCATCTGAGTGGGACCAGCAAAAAGCACTCAGCTGCAATTCTCCGAAAAGAGCGTCCCCTGCCAAAGATTGCC CCAGCCGGGAGCATCATCAGCCTGAATGCAGCCCAGTTGGCGGCAGCTGCCCAGGCAATGCAGACCATCAACATCAATGGTGTCCAGGTC CAGGGCGTGCCTGTCACCATCACCAACACAGGCGGGCAGCAGCAGCTGACAGTGCAGAATGTTTCTGGGAACAACCTGACCATCAGTGGG CTGAGCCCCACCCAGATCCAGCTGCAAATGGAACAAGCCCTGGCCGGAGAGACCCAGCCCGGGGAGAAGCGGCGCCGCATGGCCTGCACG TGTCCCAACTGCAAGGATGGGGAGAAGAGGTCTGGAGAGCAGGGCAAGAAGAAGCACGTGTGCCACATCCCCGACTGTGGCAAGACGTTC CGTAAGACGTCCTTGCTGCGTGCCCATGTGCGCCTGCACACTGGCGAGCGGCCCTTTGTCTGCAACTGGTTCTTCTGTGGGAAGAGGTTC ACACGGAGTGACGAGCTCCAACGGCATGCTCGCACCCACACAGGGGACAAACGCTTCGAGTGCGCCCAGTGTCAGAAGCGCTTCATGAGG AGTGACCACCTCACCAAGCATTACAAGACCCACCTGGTCACGAAGAACTTGTAAGGCCAACTGCGGCGGGAGGCCCTGAAGATGCAGTCC CCCACCTGTGTCCTCCCTGGGCCCCTGGTGGAAAGGAGCCCTGTGGCTGCCTTGGGCCTGCCCTCAGCCCCACTCCTGTTCTGCAACTGT CCCCACAGGAAGGGGCTCTGTTCCCTGTATTGTCCTCCTTCTGAAGCCCCTTGGCTCTGCCTTGGCCCTTCCCCTCACCACGAGCTCCCG GCCTGCCCAGACTGTGGACACTGGCCGTGCCCAATGAGACGTTCTAAACCAGGACGCGTGGGAACCCTTATTTCCAAAGGAAAAACATGC ATTTCACTCCGTCGAGGAGCAAAGTGAGCCCCTACCCCCCACCCCGATCCCCGCTCCCAACACTGCCGGAGTCGCGTCATGCCATGCCCC CTCTCCTGCACCTCCCTGGCCCTGCCGGCCACTGTGGACGCCCTGGGGCTTGGCACCCACCTCTGGAGAAACTCGGGGCCACCTCCACTC CATGTGCCCAGCCCCGCCACAACCTCTCCTCCAGCACATTCCAGCTCTATTTAAAAAGTAAAGACACCCACCGACTCCTGATCCCCCTCT TTTTCTATGGAGAACGTTGCCTTATACTCTACTTCAGATGATGAACACTGTGTACTGTGTGTGCTTTAAAGAAGTTTTATTTAATTGCTC CCTTCTTCCTTTCCTTGTTATTCACCTCCCTGATGCCTGCTTTCAGTTGAGGGTTGGGGGCAATGATGAGCATATGAATTTTTTCTCACT CTAGCAATTCCCTTTTCTAAATGACACAGCATTTAAACTCAAATCTGGATTCAGATAACAGCACCTGCACATCCTGCACCTCCTCCCTCT CCCTTCACCTCACCCCTGCCCGGCCCAAGCTCTACTTGTGTACAGTGTATATTGTATAATAGACAATTGTGTCTACTACATGTTTAAAAA CACATTGCTTGTTATTTTTGAGGCTTTTAAATTAAACAAAAATCCAACTTTATTTTTAGTTGTAACTGCTTGAGGTATGTTTTATGAATT AAGTGACAGATTTGTTATCCTTTATTAACGTACTTTGTTGGTCAGCACTGGGCTGACAAAAATTTTTTCTTGCTAATAAATTTAGTTGCC 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FusionGenePPI for SKAP1_SP2 |
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Hgene | Hgene's interactors | Tgene | Tgene's interactors |
SKAP1 | PTPRC, FYB, SRC, LYN, FYN, LCK, SKAP1, GRB2, APP, BLCAP, SH2D4A, PRAM1, FAM102A, AP3M1, MYO9B, MYO9A, POLR1B, LOC81691, EML3, WRN, ASPM, JPH1, POLR1A, POLR3A, RECQL4, HPS3, ZNF324, FAM208A, UXT, NCAPD3, MYCBP2, CUL2, PIP5K1A, NEK1, PLEKHH3, PHLDB3, PIK3C3, SEC63, SKAP2, GTF3C1, URI1, PIK3R2, PIK3R3, POLRMT, PLD2, UCKL1, PRR14L, KSR1, ZNHIT6, PDRG1, SETX, NEFL, ALMS1, APPBP2, DDX11L8, UTP15, SENP5, NCAPH2, PAX3, TBL2, ZNHIT2, ZNF644, SUGCT, PKN3, TTF2, PPHLN1, NPHP4, MTMR1, PKN2, C21orf2, POLA1, POLR3B, POLR2L, CCP110, SETD5, ELP3, DOCK7, USP54, POLR1E, TRMT44, POLR1D, EXPH5, NEK4, ATXN2, SBF1, GTPBP6, TRMT1, CD3EAP, PER1, SUPT6H, MCM8, RTEL1, TIGD5, PUSL1, KLHDC3, DYNLL2, MAP7D1 | SP2 | E2F1, NR0B2, NKX3-1, ESR1, IRF1, APP, SOX2, HECW2, FHL2, MCM7, BANP, ZDHHC17 |
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Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Still interaction with |
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Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Interaction lost with |
Hgene | SKAP1 | chr17:46423267 | chr17:45992678 | ENST00000336915 | - | 4 | 13 | 290_295 | 93 | 448 | FYB1 |
Hgene | SKAP1 | chr17:46423267 | chr17:45992678 | ENST00000584924 | - | 4 | 12 | 290_295 | 93 | 360 | FYB1 |
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Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Interaction lost with |
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RelatedDrugs for SKAP1_SP2 |
![]() (DrugBank Version 5.1.0 2018-04-02) |
Partner | Gene | UniProtAcc | DrugBank ID | Drug name | Drug activity | Drug type | Drug status |
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RelatedDiseases for SKAP1_SP2 |
![]() (DisGeNet 4.0) |
Partner | Gene | Disease ID | Disease name | # pubmeds | Source |
Hgene | SKAP1 | C0919267 | ovarian neoplasm | 1 | CTD_human |