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Center for Computational Systems Medicine
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FusionGeneSummary

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FusionProtFeature

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FusionGeneSequence

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FusionGenePPI

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Fusion gene ID: 33597

FusionGeneSummary for SGSM2_PTK6

check button Fusion gene summary
Fusion gene informationFusion gene name: SGSM2_PTK6
Fusion gene ID: 33597
HgeneTgene
Gene symbol

SGSM2

PTK6

Gene ID

9905

5753

Gene namesmall G protein signaling modulator 2protein tyrosine kinase 6
SynonymsRUTBC1BRK
Cytomap

17p13.3

20q13.33

Type of geneprotein-codingprotein-coding
Descriptionsmall G protein signaling modulator 2RUN and TBC1 domain containing 1small G protein signaling modulator 2 proteinprotein-tyrosine kinase 6PTK6 protein tyrosine kinase 6breast tumor kinaseprotein-tyrosine kinase BRKtyrosine-protein kinase BRK
Modification date2018052320180523
UniProtAcc

O43147

Q13882

Ensembl transtripts involved in fusion geneENST00000268989, ENST00000426855, 
ENST00000574563, 
ENST00000217185, 
ENST00000542869, 
Fusion gene scores* DoF score6 X 5 X 4=1202 X 2 X 2=8
# samples 62
** MAII scorelog2(6/120*10)=-1
possibly effective Gene in Pan-Cancer Fusion Genes (peGinPCFGs).
DoF>8 and MAII<0
log2(2/8*10)=1.32192809488736
Context

PubMed: SGSM2 [Title/Abstract] AND PTK6 [Title/Abstract] AND fusion [Title/Abstract]

Functional or gene categories assigned by FusionGDB annotationOncogene involved fusion gene, in-frame and retained their domain.
Kinase involved fusion gene, inframe and retained kinase domain.
* DoF score (Degree of Frequency) = # partners X # break points X # cancer types
** MAII score (Major Active Isofusion Index) = log2(# samples/DoF score*10)

check button Gene ontology of each fusion partner gene with evidence of Inferred from Direct Assay (IDA) from Entrez
PartnerGeneGO IDGO termPubMed ID
TgenePTK6

GO:0007260

tyrosine phosphorylation of STAT protein

16568091|17997837

TgenePTK6

GO:0016477

cell migration

15572663

TgenePTK6

GO:0061099

negative regulation of protein tyrosine kinase activity

15539407


check button Fusion gene information from three resources
(ChiTars (NAR, 2018), tumorfusions (NAR, 2018), Gao et al. (Cell, 2018))
* All genome coordinats were lifted-over on hg19.
* Click on the break point to see the gene structure around the break point region using the UCSC Genome Browser.
Data typeSourceCancer typeSampleHgeneHchrHbpHstrandTgeneTchrTbpTstrand
TCGALDSTADTCGA-CG-5718-01ASGSM2chr17

2241039

+PTK6chr20

62165057

-
* LD: Li Ding group's fusion gene list
  RV: Roel Verhaak group's fusion gene list
  ChiTaRs fusion database

check button Open reading frame (ORF) analsis of fusion genes based on Ensembl gene isoform structure.
* Click on the break point to see the gene structure around the break point region using the UCSC Genome Browser.
ORFHenstTenstHgeneHchrHbpHstrandTgeneTchrTbpTstrand
In-frameENST00000268989ENST00000217185SGSM2chr17

2241039

+PTK6chr20

62165057

-
In-frameENST00000268989ENST00000542869SGSM2chr17

2241039

+PTK6chr20

62165057

-
In-frameENST00000426855ENST00000217185SGSM2chr17

2241039

+PTK6chr20

62165057

-
In-frameENST00000426855ENST00000542869SGSM2chr17

2241039

+PTK6chr20

62165057

-
In-frameENST00000574563ENST00000217185SGSM2chr17

2241039

+PTK6chr20

62165057

-
In-frameENST00000574563ENST00000542869SGSM2chr17

2241039

+PTK6chr20

62165057

-

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FusionProtFeatures for SGSM2_PTK6


check buttonMain function of each fusion partner protein. (from UniProt)
HgeneTgene
SGSM2

O43147

PTK6

Q13882

Possesses GTPase activator activity towards RAB32,RAB33B and RAB38 (PubMed:26620560, PubMed:21808068). Regulates thetrafficking of melanogenic enzymes TYR, TYRP1 and DCT/TYRP2 tomelanosomes in melanocytes by inactivating RAB32 and RAB38.Inhibits RAB32 and RAB38 activation both directly by promotingtheir GTPase activity and indirectly by disrupting the RAB9A-HPS4interaction which is required for RAB32/38 activation(PubMed:26620560). {ECO:0000269|PubMed:21808068,ECO:0000269|PubMed:26620560}. Non-receptor tyrosine-protein kinase implicated in theregulation of a variety of signaling pathways that control thedifferentiation and maintenance of normal epithelia, as well astumor growth. Function seems to be context dependent and differdepending on cell type, as well as its intracellular localization.A number of potential nuclear and cytoplasmic substrates have beenidentified. These include the RNA-binding proteins: KHDRBS1/SAM68,KHDRBS2/SLM1, KHDRBS3/SLM2 and SFPQ/PSF; transcription factors:STAT3 and STAT5A/B and a variety of signaling molecules:ARHGAP35/p190RhoGAP, PXN/paxillin, BTK/ATK, STAP2/BKS. Associatesalso with a variety of proteins that are likely upstream of PTK6in various signaling pathways, or for which PTK6 may play anadapter-like role. These proteins include ADAM15, EGFR, ERBB2,ERBB3 and IRS4. In normal or non-tumorigenic tissues, PTK6promotes cellular differentiation and apoptosis. In tumors PTK6contributes to cancer progression by sensitizing cells tomitogenic signals and enhancing proliferation, anchorage-independent survival and migration/invasion. Association withEGFR, ERBB2, ERBB3 may contribute to mammary tumor development andgrowth through enhancement of EGF-induced signaling via BTK/AKTand PI3 kinase. Contributes to migration and proliferation bycontributing to EGF-mediated phosphorylation ofARHGAP35/p190RhoGAP, which promotes association withRASA1/p120RasGAP, inactivating RhoA while activating RAS. EGFstimulation resulted in phosphorylation of PNX/Paxillin by PTK6and activation of RAC1 via CRK/CrKII, thereby promoting migrationand invasion. PTK6 activates STAT3 and STAT5B to promoteproliferation. Nuclear PTK6 may be important for regulating growthin normal epithelia, while cytoplasmic PTK6 might activateoncogenic signaling pathways. Isoform 2 inhibits PTK6 phosphorylation and PTK6association with other tyrosine-phosphorylated proteins.

check buttonRetention analysis result of each fusion partner protein across 39 protein features of UniProt such as six molecule processing features, 13 region features, four site features, six amino acid modification features, two natural variation features, five experimental info features, and 3 secondary structure features. Here, because of limited space for viewing, we only show the protein feature retention information belong to the 13 regional features. All retention annotation result can be downloaded at

download page

.

* Minus value of BPloci means that the break pointn is located before the CDS.
- In-frame and retained protein feature among the 13 regional features.
>>>>>>>
PartnerGeneHbpTbpENSTStrandBPexonTotalExonProtein feature loci*BPlociTotalLenProtein featureProtein feature note
TgenePTK6chr17:2241039chr20:62165057ENST00000217185-28191_445172452DomainProtein kinase
TgenePTK6chr17:2241039chr20:62165057ENST00000542869-17191_44571351DomainProtein kinase
TgenePTK6chr17:2241039chr20:62165057ENST00000542869-1778_17071351DomainSH2
TgenePTK6chr17:2241039chr20:62165057ENST00000217185-28197_205172452Nucleotide bindingATP
TgenePTK6chr17:2241039chr20:62165057ENST00000542869-17197_20571351Nucleotide bindingATP
TgenePTK6chr17:2241039chr20:62165057ENST00000217185-28171_190172452RegionNote=Linker
TgenePTK6chr17:2241039chr20:62165057ENST00000542869-17171_19071351RegionNote=Linker

- In-frame and not-retained protein feature among the 13 regional features.
>>>>>>
PartnerGeneHbpTbpENSTStrandBPexonTotalExonProtein feature loci*BPlociTotalLenProtein featureProtein feature note
HgeneSGSM2chr17:2241039chr20:62165057ENST00000268989+12434_191191052DomainRUN
HgeneSGSM2chr17:2241039chr20:62165057ENST00000268989+124566_939191052DomainRab-GAP TBC
HgeneSGSM2chr17:2241039chr20:62165057ENST00000426855+12334_191191007DomainRUN
HgeneSGSM2chr17:2241039chr20:62165057ENST00000426855+123566_939191007DomainRab-GAP TBC
HgeneSGSM2chr17:2241039chr20:62165057ENST00000574563+12334_19119988DomainRUN
HgeneSGSM2chr17:2241039chr20:62165057ENST00000574563+123566_93919988DomainRab-GAP TBC
TgenePTK6chr17:2241039chr20:62165057ENST00000217185-2878_170172452DomainSH2
TgenePTK6chr17:2241039chr20:62165057ENST00000217185-288_72172452DomainSH3
TgenePTK6chr17:2241039chr20:62165057ENST00000542869-178_7271351DomainSH3


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FusionGeneSequence for SGSM2_PTK6


check button For in-frame fusion transcripts, we provide the fusion transcript sequences and fusion amino acid sequences.
(nt: nucleotides, aa: amino acids)

* Fusion amino acid sequences.
>In-frame_SGSM2_ENST00000268989_chr17_2241039_+_PTK6_ENST00000217185_chr20_62165057_-_299aa
MGSAEDAVKEKLLWNVKKEHEPEPLPHWDDWERPREEFTLCRKLGSGYFGEVFEGLWKDRVQVAIKVISRDNLLHQQMLQSEIQAMKKLR
HKHILALYAVVSVGDPVYIITELMAKGSLLELLRDSDEKVLPVSELLDIAWQVAEGMCYLESQNYIHRDLAARNILVGENTLCKVGDFGL
ARLIKEDVYLSHDHNIPYKWTAPEALSRGHYSTKSDVWSFGILLHEMFSRGQVPYPGMSNHEAFLRVDAGYRMPCPLECPPSVHKLMLTC

>In-frame_SGSM2_ENST00000268989_chr17_2241039_+_PTK6_ENST00000542869_chr20_62165057_-_299aa
MGSAEDAVKEKLLWNVKKEHEPEPLPHWDDWERPREEFTLCRKLGSGYFGEVFEGLWKDRVQVAIKVISRDNLLHQQMLQSEIQAMKKLR
HKHILALYAVVSVGDPVYIITELMAKGSLLELLRDSDEKVLPVSELLDIAWQVAEGMCYLESQNYIHRDLAARNILVGENTLCKVGDFGL
ARLIKEDVYLSHDHNIPYKWTAPEALSRGHYSTKSDVWSFGILLHEMFSRGQVPYPGMSNHEAFLRVDAGYRMPCPLECPPSVHKLMLTC

>In-frame_SGSM2_ENST00000426855_chr17_2241039_+_PTK6_ENST00000217185_chr20_62165057_-_299aa
MGSAEDAVKEKLLWNVKKEHEPEPLPHWDDWERPREEFTLCRKLGSGYFGEVFEGLWKDRVQVAIKVISRDNLLHQQMLQSEIQAMKKLR
HKHILALYAVVSVGDPVYIITELMAKGSLLELLRDSDEKVLPVSELLDIAWQVAEGMCYLESQNYIHRDLAARNILVGENTLCKVGDFGL
ARLIKEDVYLSHDHNIPYKWTAPEALSRGHYSTKSDVWSFGILLHEMFSRGQVPYPGMSNHEAFLRVDAGYRMPCPLECPPSVHKLMLTC

>In-frame_SGSM2_ENST00000426855_chr17_2241039_+_PTK6_ENST00000542869_chr20_62165057_-_299aa
MGSAEDAVKEKLLWNVKKEHEPEPLPHWDDWERPREEFTLCRKLGSGYFGEVFEGLWKDRVQVAIKVISRDNLLHQQMLQSEIQAMKKLR
HKHILALYAVVSVGDPVYIITELMAKGSLLELLRDSDEKVLPVSELLDIAWQVAEGMCYLESQNYIHRDLAARNILVGENTLCKVGDFGL
ARLIKEDVYLSHDHNIPYKWTAPEALSRGHYSTKSDVWSFGILLHEMFSRGQVPYPGMSNHEAFLRVDAGYRMPCPLECPPSVHKLMLTC

>In-frame_SGSM2_ENST00000574563_chr17_2241039_+_PTK6_ENST00000217185_chr20_62165057_-_299aa
MGSAEDAVKEKLLWNVKKEHEPEPLPHWDDWERPREEFTLCRKLGSGYFGEVFEGLWKDRVQVAIKVISRDNLLHQQMLQSEIQAMKKLR
HKHILALYAVVSVGDPVYIITELMAKGSLLELLRDSDEKVLPVSELLDIAWQVAEGMCYLESQNYIHRDLAARNILVGENTLCKVGDFGL
ARLIKEDVYLSHDHNIPYKWTAPEALSRGHYSTKSDVWSFGILLHEMFSRGQVPYPGMSNHEAFLRVDAGYRMPCPLECPPSVHKLMLTC

>In-frame_SGSM2_ENST00000574563_chr17_2241039_+_PTK6_ENST00000542869_chr20_62165057_-_299aa
MGSAEDAVKEKLLWNVKKEHEPEPLPHWDDWERPREEFTLCRKLGSGYFGEVFEGLWKDRVQVAIKVISRDNLLHQQMLQSEIQAMKKLR
HKHILALYAVVSVGDPVYIITELMAKGSLLELLRDSDEKVLPVSELLDIAWQVAEGMCYLESQNYIHRDLAARNILVGENTLCKVGDFGL
ARLIKEDVYLSHDHNIPYKWTAPEALSRGHYSTKSDVWSFGILLHEMFSRGQVPYPGMSNHEAFLRVDAGYRMPCPLECPPSVHKLMLTC


* Fusion transcript sequences (only coding sequence (CDS) region).
>In-frame_SGSM2_ENST00000268989_chr17_2241039_+_PTK6_ENST00000217185_chr20_62165057_-_897nt
ATGGGCAGCGCAGAGGACGCAGTCAAAGAGAAACTGCTGTGGAACGTGAAGAAGGAGCACGAGCCTGAGCCCCTGCCCCATTGGGATGAC
TGGGAGAGGCCGAGGGAGGAGTTCACGCTCTGCAGGAAGCTGGGGTCCGGCTACTTTGGGGAGGTCTTCGAGGGGCTCTGGAAAGACCGG
GTCCAGGTGGCCATTAAGGTGATTTCTCGAGACAACCTCCTGCACCAGCAGATGCTGCAGTCGGAGATCCAGGCCATGAAGAAGCTGCGG
CACAAACACATCCTGGCGCTGTACGCCGTGGTGTCCGTGGGGGACCCCGTGTACATCATCACGGAGCTCATGGCCAAGGGCAGCCTGCTG
GAGCTGCTCCGCGACTCTGATGAGAAAGTCCTGCCCGTTTCGGAGCTGCTGGACATCGCCTGGCAGGTGGCTGAGGGCATGTGTTACCTG
GAGTCGCAGAATTACATCCACCGGGACCTGGCCGCCAGGAACATCCTCGTCGGGGAAAACACCCTCTGCAAAGTTGGGGACTTCGGGTTA
GCCAGGCTTATCAAGGAGGACGTCTACCTCTCCCATGACCACAATATCCCCTACAAGTGGACGGCCCCTGAAGCGCTCTCCCGAGGCCAT
TACTCCACCAAATCCGACGTCTGGTCCTTTGGGATTCTCCTGCATGAGATGTTCAGCAGGGGTCAGGTGCCCTACCCAGGCATGTCCAAC
CATGAGGCCTTCCTGAGGGTGGACGCCGGCTACCGCATGCCCTGCCCTCTGGAGTGCCCGCCCAGCGTGCACAAGCTGATGCTGACATGC

>In-frame_SGSM2_ENST00000268989_chr17_2241039_+_PTK6_ENST00000542869_chr20_62165057_-_897nt
ATGGGCAGCGCAGAGGACGCAGTCAAAGAGAAACTGCTGTGGAACGTGAAGAAGGAGCACGAGCCTGAGCCCCTGCCCCATTGGGATGAC
TGGGAGAGGCCGAGGGAGGAGTTCACGCTCTGCAGGAAGCTGGGGTCCGGCTACTTTGGGGAGGTCTTCGAGGGGCTCTGGAAAGACCGG
GTCCAGGTGGCCATTAAGGTGATTTCTCGAGACAACCTCCTGCACCAGCAGATGCTGCAGTCGGAGATCCAGGCCATGAAGAAGCTGCGG
CACAAACACATCCTGGCGCTGTACGCCGTGGTGTCCGTGGGGGACCCCGTGTACATCATCACGGAGCTCATGGCCAAGGGCAGCCTGCTG
GAGCTGCTCCGCGACTCTGATGAGAAAGTCCTGCCCGTTTCGGAGCTGCTGGACATCGCCTGGCAGGTGGCTGAGGGCATGTGTTACCTG
GAGTCGCAGAATTACATCCACCGGGACCTGGCCGCCAGGAACATCCTCGTCGGGGAAAACACCCTCTGCAAAGTTGGGGACTTCGGGTTA
GCCAGGCTTATCAAGGAGGACGTCTACCTCTCCCATGACCACAATATCCCCTACAAGTGGACGGCCCCTGAAGCGCTCTCCCGAGGCCAT
TACTCCACCAAATCCGACGTCTGGTCCTTTGGGATTCTCCTGCATGAGATGTTCAGCAGGGGTCAGGTGCCCTACCCAGGCATGTCCAAC
CATGAGGCCTTCCTGAGGGTGGACGCCGGCTACCGCATGCCCTGCCCTCTGGAGTGCCCGCCCAGCGTGCACAAGCTGATGCTGACATGC

>In-frame_SGSM2_ENST00000426855_chr17_2241039_+_PTK6_ENST00000217185_chr20_62165057_-_897nt
ATGGGCAGCGCAGAGGACGCAGTCAAAGAGAAACTGCTGTGGAACGTGAAGAAGGAGCACGAGCCTGAGCCCCTGCCCCATTGGGATGAC
TGGGAGAGGCCGAGGGAGGAGTTCACGCTCTGCAGGAAGCTGGGGTCCGGCTACTTTGGGGAGGTCTTCGAGGGGCTCTGGAAAGACCGG
GTCCAGGTGGCCATTAAGGTGATTTCTCGAGACAACCTCCTGCACCAGCAGATGCTGCAGTCGGAGATCCAGGCCATGAAGAAGCTGCGG
CACAAACACATCCTGGCGCTGTACGCCGTGGTGTCCGTGGGGGACCCCGTGTACATCATCACGGAGCTCATGGCCAAGGGCAGCCTGCTG
GAGCTGCTCCGCGACTCTGATGAGAAAGTCCTGCCCGTTTCGGAGCTGCTGGACATCGCCTGGCAGGTGGCTGAGGGCATGTGTTACCTG
GAGTCGCAGAATTACATCCACCGGGACCTGGCCGCCAGGAACATCCTCGTCGGGGAAAACACCCTCTGCAAAGTTGGGGACTTCGGGTTA
GCCAGGCTTATCAAGGAGGACGTCTACCTCTCCCATGACCACAATATCCCCTACAAGTGGACGGCCCCTGAAGCGCTCTCCCGAGGCCAT
TACTCCACCAAATCCGACGTCTGGTCCTTTGGGATTCTCCTGCATGAGATGTTCAGCAGGGGTCAGGTGCCCTACCCAGGCATGTCCAAC
CATGAGGCCTTCCTGAGGGTGGACGCCGGCTACCGCATGCCCTGCCCTCTGGAGTGCCCGCCCAGCGTGCACAAGCTGATGCTGACATGC

>In-frame_SGSM2_ENST00000426855_chr17_2241039_+_PTK6_ENST00000542869_chr20_62165057_-_897nt
ATGGGCAGCGCAGAGGACGCAGTCAAAGAGAAACTGCTGTGGAACGTGAAGAAGGAGCACGAGCCTGAGCCCCTGCCCCATTGGGATGAC
TGGGAGAGGCCGAGGGAGGAGTTCACGCTCTGCAGGAAGCTGGGGTCCGGCTACTTTGGGGAGGTCTTCGAGGGGCTCTGGAAAGACCGG
GTCCAGGTGGCCATTAAGGTGATTTCTCGAGACAACCTCCTGCACCAGCAGATGCTGCAGTCGGAGATCCAGGCCATGAAGAAGCTGCGG
CACAAACACATCCTGGCGCTGTACGCCGTGGTGTCCGTGGGGGACCCCGTGTACATCATCACGGAGCTCATGGCCAAGGGCAGCCTGCTG
GAGCTGCTCCGCGACTCTGATGAGAAAGTCCTGCCCGTTTCGGAGCTGCTGGACATCGCCTGGCAGGTGGCTGAGGGCATGTGTTACCTG
GAGTCGCAGAATTACATCCACCGGGACCTGGCCGCCAGGAACATCCTCGTCGGGGAAAACACCCTCTGCAAAGTTGGGGACTTCGGGTTA
GCCAGGCTTATCAAGGAGGACGTCTACCTCTCCCATGACCACAATATCCCCTACAAGTGGACGGCCCCTGAAGCGCTCTCCCGAGGCCAT
TACTCCACCAAATCCGACGTCTGGTCCTTTGGGATTCTCCTGCATGAGATGTTCAGCAGGGGTCAGGTGCCCTACCCAGGCATGTCCAAC
CATGAGGCCTTCCTGAGGGTGGACGCCGGCTACCGCATGCCCTGCCCTCTGGAGTGCCCGCCCAGCGTGCACAAGCTGATGCTGACATGC

>In-frame_SGSM2_ENST00000574563_chr17_2241039_+_PTK6_ENST00000217185_chr20_62165057_-_897nt
ATGGGCAGCGCAGAGGACGCAGTCAAAGAGAAACTGCTGTGGAACGTGAAGAAGGAGCACGAGCCTGAGCCCCTGCCCCATTGGGATGAC
TGGGAGAGGCCGAGGGAGGAGTTCACGCTCTGCAGGAAGCTGGGGTCCGGCTACTTTGGGGAGGTCTTCGAGGGGCTCTGGAAAGACCGG
GTCCAGGTGGCCATTAAGGTGATTTCTCGAGACAACCTCCTGCACCAGCAGATGCTGCAGTCGGAGATCCAGGCCATGAAGAAGCTGCGG
CACAAACACATCCTGGCGCTGTACGCCGTGGTGTCCGTGGGGGACCCCGTGTACATCATCACGGAGCTCATGGCCAAGGGCAGCCTGCTG
GAGCTGCTCCGCGACTCTGATGAGAAAGTCCTGCCCGTTTCGGAGCTGCTGGACATCGCCTGGCAGGTGGCTGAGGGCATGTGTTACCTG
GAGTCGCAGAATTACATCCACCGGGACCTGGCCGCCAGGAACATCCTCGTCGGGGAAAACACCCTCTGCAAAGTTGGGGACTTCGGGTTA
GCCAGGCTTATCAAGGAGGACGTCTACCTCTCCCATGACCACAATATCCCCTACAAGTGGACGGCCCCTGAAGCGCTCTCCCGAGGCCAT
TACTCCACCAAATCCGACGTCTGGTCCTTTGGGATTCTCCTGCATGAGATGTTCAGCAGGGGTCAGGTGCCCTACCCAGGCATGTCCAAC
CATGAGGCCTTCCTGAGGGTGGACGCCGGCTACCGCATGCCCTGCCCTCTGGAGTGCCCGCCCAGCGTGCACAAGCTGATGCTGACATGC

>In-frame_SGSM2_ENST00000574563_chr17_2241039_+_PTK6_ENST00000542869_chr20_62165057_-_897nt
ATGGGCAGCGCAGAGGACGCAGTCAAAGAGAAACTGCTGTGGAACGTGAAGAAGGAGCACGAGCCTGAGCCCCTGCCCCATTGGGATGAC
TGGGAGAGGCCGAGGGAGGAGTTCACGCTCTGCAGGAAGCTGGGGTCCGGCTACTTTGGGGAGGTCTTCGAGGGGCTCTGGAAAGACCGG
GTCCAGGTGGCCATTAAGGTGATTTCTCGAGACAACCTCCTGCACCAGCAGATGCTGCAGTCGGAGATCCAGGCCATGAAGAAGCTGCGG
CACAAACACATCCTGGCGCTGTACGCCGTGGTGTCCGTGGGGGACCCCGTGTACATCATCACGGAGCTCATGGCCAAGGGCAGCCTGCTG
GAGCTGCTCCGCGACTCTGATGAGAAAGTCCTGCCCGTTTCGGAGCTGCTGGACATCGCCTGGCAGGTGGCTGAGGGCATGTGTTACCTG
GAGTCGCAGAATTACATCCACCGGGACCTGGCCGCCAGGAACATCCTCGTCGGGGAAAACACCCTCTGCAAAGTTGGGGACTTCGGGTTA
GCCAGGCTTATCAAGGAGGACGTCTACCTCTCCCATGACCACAATATCCCCTACAAGTGGACGGCCCCTGAAGCGCTCTCCCGAGGCCAT
TACTCCACCAAATCCGACGTCTGGTCCTTTGGGATTCTCCTGCATGAGATGTTCAGCAGGGGTCAGGTGCCCTACCCAGGCATGTCCAAC
CATGAGGCCTTCCTGAGGGTGGACGCCGGCTACCGCATGCCCTGCCCTCTGGAGTGCCCGCCCAGCGTGCACAAGCTGATGCTGACATGC


* Fusion transcript sequences (Full-length transcript).
>In-frame_SGSM2_ENST00000268989_chr17_2241039_+_PTK6_ENST00000217185_chr20_62165057_-_2185nt
GGAAGATGGCTGCGGAGCCGAGCACCGGGCAGTGGCTGCGGCGGCGGCGGCGGCGGCGGGCCGGGAGCGCGGCGGGCGGGGGCTCCGCCT
TGCGCGTGGGGCGCTGAGCCGAGAGGCGCGGAGGCGGCGAGGGCGCGGGGGCTCTGAGGACCGCTCGGCGCCGCCTCCTGCCACACCATG
GGCAGCGCAGAGGACGCAGTCAAAGAGAAACTGCTGTGGAACGTGAAGAAGGAGCACGAGCCTGAGCCCCTGCCCCATTGGGATGACTGG
GAGAGGCCGAGGGAGGAGTTCACGCTCTGCAGGAAGCTGGGGTCCGGCTACTTTGGGGAGGTCTTCGAGGGGCTCTGGAAAGACCGGGTC
CAGGTGGCCATTAAGGTGATTTCTCGAGACAACCTCCTGCACCAGCAGATGCTGCAGTCGGAGATCCAGGCCATGAAGAAGCTGCGGCAC
AAACACATCCTGGCGCTGTACGCCGTGGTGTCCGTGGGGGACCCCGTGTACATCATCACGGAGCTCATGGCCAAGGGCAGCCTGCTGGAG
CTGCTCCGCGACTCTGATGAGAAAGTCCTGCCCGTTTCGGAGCTGCTGGACATCGCCTGGCAGGTGGCTGAGGGCATGTGTTACCTGGAG
TCGCAGAATTACATCCACCGGGACCTGGCCGCCAGGAACATCCTCGTCGGGGAAAACACCCTCTGCAAAGTTGGGGACTTCGGGTTAGCC
AGGCTTATCAAGGAGGACGTCTACCTCTCCCATGACCACAATATCCCCTACAAGTGGACGGCCCCTGAAGCGCTCTCCCGAGGCCATTAC
TCCACCAAATCCGACGTCTGGTCCTTTGGGATTCTCCTGCATGAGATGTTCAGCAGGGGTCAGGTGCCCTACCCAGGCATGTCCAACCAT
GAGGCCTTCCTGAGGGTGGACGCCGGCTACCGCATGCCCTGCCCTCTGGAGTGCCCGCCCAGCGTGCACAAGCTGATGCTGACATGCTGG
TGCAGGGACCCCGAGCAGAGACCCTGCTTCAAGGCCCTGCGGGAGAGGCTCTCCAGCTTCACCAGCTACGAGAACCCGACCTGAGCTGCT
GTGGAGCGGGCATGGCCGGGCCCTGCTGAGGAGGGGCCTGGGCAGAGGGCCTGGACCTGGGATCAAGGCCCACGCGCTTCCCTGGGGTTT
ACTGAGGTGATGGGTGCAGGAAAGGTTCACAAATGTGGAGTGTCTGCGTCCAATACACGCGTGTGCTCCTCTCCTTACTCCATCGTGTGT
GCCTTGGGTCTCAGCTGCTGACACGCAGCCTGCTCTGGAGCCTGCAGATGAGATCCGGGAGACTGACACGAAGCCAGCAGAGGTCAGAGG
GGACTCTGACCACAGCCCGCTCTCTGGCTGTCTGTCTGCAGTGCCCGGCTGAGGGTGGGAGGCAAACACGCCTTGTTCCTGCTCTTCCCA
GTTCAGCTTGGTGGGAGAAAGTCATTCGCGTGGCTCGGGACGCTCATGTAAATTTGGTTTTGGTGCTCAAGGGTTCTTTCCTCCCAGGGG
CAGGTGTTTCTTTCCTGTTTGTCTTGTGTCTTGAGAGCTTGGCCTTATGACCAGTGAGAACTCTCTCCCTGGTCTCTGCCAGCCCAAGCA
TCACTGCCCGAGGCGCCAGCTCAGTTTCACCGTCCACGTCCACAAGGGGCTTTTCCCACCTTCACCTTTGTCGCTGGGTCAGTGCTGGAA
AGCGCCCCTCACTCCTGCGCTGACAAGGGCCCTTCTCTACTGTCTGTGGGGTGGTTCCGGGCTGGGGGGGCTGCCTCCTTTGCACCTGAT
TTTGAAGGTGTCTCTTTCATCCATGGTTAAGTCATAAAAAGCTTATTGGTTTTGGTTTTGACTCACCTGAAAGTTTTTTTGGTTTAAAAG
AAGAATAGGCGGGGCACGGTGGCTCATGCCTGTAATCCCAGCACTTTGGGAGGCTGAGGCAGGTGGATCACGAGGTCAGGAGATCGACAC
CATCCTGGCTAACACGGTGAAACCCCGTCTCTACTAAAAAATACAAAAAATTAGCTGGGTGTGGTGGTGGGGGTGGGCGCCTGTAGTCCC
AGCTACGTGGGAGGCTGAGGCAGCAGACTGGTGTGAACCCGGGAGGTGGAGCTTGCAGTGAGCCGAGATCGCGCCACTGCACTCCAGCCT

>In-frame_SGSM2_ENST00000268989_chr17_2241039_+_PTK6_ENST00000542869_chr20_62165057_-_1265nt
GGAAGATGGCTGCGGAGCCGAGCACCGGGCAGTGGCTGCGGCGGCGGCGGCGGCGGCGGGCCGGGAGCGCGGCGGGCGGGGGCTCCGCCT
TGCGCGTGGGGCGCTGAGCCGAGAGGCGCGGAGGCGGCGAGGGCGCGGGGGCTCTGAGGACCGCTCGGCGCCGCCTCCTGCCACACCATG
GGCAGCGCAGAGGACGCAGTCAAAGAGAAACTGCTGTGGAACGTGAAGAAGGAGCACGAGCCTGAGCCCCTGCCCCATTGGGATGACTGG
GAGAGGCCGAGGGAGGAGTTCACGCTCTGCAGGAAGCTGGGGTCCGGCTACTTTGGGGAGGTCTTCGAGGGGCTCTGGAAAGACCGGGTC
CAGGTGGCCATTAAGGTGATTTCTCGAGACAACCTCCTGCACCAGCAGATGCTGCAGTCGGAGATCCAGGCCATGAAGAAGCTGCGGCAC
AAACACATCCTGGCGCTGTACGCCGTGGTGTCCGTGGGGGACCCCGTGTACATCATCACGGAGCTCATGGCCAAGGGCAGCCTGCTGGAG
CTGCTCCGCGACTCTGATGAGAAAGTCCTGCCCGTTTCGGAGCTGCTGGACATCGCCTGGCAGGTGGCTGAGGGCATGTGTTACCTGGAG
TCGCAGAATTACATCCACCGGGACCTGGCCGCCAGGAACATCCTCGTCGGGGAAAACACCCTCTGCAAAGTTGGGGACTTCGGGTTAGCC
AGGCTTATCAAGGAGGACGTCTACCTCTCCCATGACCACAATATCCCCTACAAGTGGACGGCCCCTGAAGCGCTCTCCCGAGGCCATTAC
TCCACCAAATCCGACGTCTGGTCCTTTGGGATTCTCCTGCATGAGATGTTCAGCAGGGGTCAGGTGCCCTACCCAGGCATGTCCAACCAT
GAGGCCTTCCTGAGGGTGGACGCCGGCTACCGCATGCCCTGCCCTCTGGAGTGCCCGCCCAGCGTGCACAAGCTGATGCTGACATGCTGG
TGCAGGGACCCCGAGCAGAGACCCTGCTTCAAGGCCCTGCGGGAGAGGCTCTCCAGCTTCACCAGCTACGAGAACCCGACCTGAGCTGCT
GTGGAGCGGGCATGGCCGGGCCCTGCTGAGGAGGGGCCTGGGCAGAGGGCCTGGACCTGGGATCAAGGCCCACGCGCTTCCCTGGGGTTT
ACTGAGGTGATGGGTGCAGGAAAGGTTCACAAATGTGGAGTGTCTGCGTCCAATACACGCGTGTGCTCCTCTCCTTACTCCATCGTGTGT

>In-frame_SGSM2_ENST00000426855_chr17_2241039_+_PTK6_ENST00000217185_chr20_62165057_-_2183nt
AAGATGGCTGCGGAGCCGAGCACCGGGCAGTGGCTGCGGCGGCGGCGGCGGCGGCGGGCCGGGAGCGCGGCGGGCGGGGGCTCCGCCTTG
CGCGTGGGGCGCTGAGCCGAGAGGCGCGGAGGCGGCGAGGGCGCGGGGGCTCTGAGGACCGCTCGGCGCCGCCTCCTGCCACACCATGGG
CAGCGCAGAGGACGCAGTCAAAGAGAAACTGCTGTGGAACGTGAAGAAGGAGCACGAGCCTGAGCCCCTGCCCCATTGGGATGACTGGGA
GAGGCCGAGGGAGGAGTTCACGCTCTGCAGGAAGCTGGGGTCCGGCTACTTTGGGGAGGTCTTCGAGGGGCTCTGGAAAGACCGGGTCCA
GGTGGCCATTAAGGTGATTTCTCGAGACAACCTCCTGCACCAGCAGATGCTGCAGTCGGAGATCCAGGCCATGAAGAAGCTGCGGCACAA
ACACATCCTGGCGCTGTACGCCGTGGTGTCCGTGGGGGACCCCGTGTACATCATCACGGAGCTCATGGCCAAGGGCAGCCTGCTGGAGCT
GCTCCGCGACTCTGATGAGAAAGTCCTGCCCGTTTCGGAGCTGCTGGACATCGCCTGGCAGGTGGCTGAGGGCATGTGTTACCTGGAGTC
GCAGAATTACATCCACCGGGACCTGGCCGCCAGGAACATCCTCGTCGGGGAAAACACCCTCTGCAAAGTTGGGGACTTCGGGTTAGCCAG
GCTTATCAAGGAGGACGTCTACCTCTCCCATGACCACAATATCCCCTACAAGTGGACGGCCCCTGAAGCGCTCTCCCGAGGCCATTACTC
CACCAAATCCGACGTCTGGTCCTTTGGGATTCTCCTGCATGAGATGTTCAGCAGGGGTCAGGTGCCCTACCCAGGCATGTCCAACCATGA
GGCCTTCCTGAGGGTGGACGCCGGCTACCGCATGCCCTGCCCTCTGGAGTGCCCGCCCAGCGTGCACAAGCTGATGCTGACATGCTGGTG
CAGGGACCCCGAGCAGAGACCCTGCTTCAAGGCCCTGCGGGAGAGGCTCTCCAGCTTCACCAGCTACGAGAACCCGACCTGAGCTGCTGT
GGAGCGGGCATGGCCGGGCCCTGCTGAGGAGGGGCCTGGGCAGAGGGCCTGGACCTGGGATCAAGGCCCACGCGCTTCCCTGGGGTTTAC
TGAGGTGATGGGTGCAGGAAAGGTTCACAAATGTGGAGTGTCTGCGTCCAATACACGCGTGTGCTCCTCTCCTTACTCCATCGTGTGTGC
CTTGGGTCTCAGCTGCTGACACGCAGCCTGCTCTGGAGCCTGCAGATGAGATCCGGGAGACTGACACGAAGCCAGCAGAGGTCAGAGGGG
ACTCTGACCACAGCCCGCTCTCTGGCTGTCTGTCTGCAGTGCCCGGCTGAGGGTGGGAGGCAAACACGCCTTGTTCCTGCTCTTCCCAGT
TCAGCTTGGTGGGAGAAAGTCATTCGCGTGGCTCGGGACGCTCATGTAAATTTGGTTTTGGTGCTCAAGGGTTCTTTCCTCCCAGGGGCA
GGTGTTTCTTTCCTGTTTGTCTTGTGTCTTGAGAGCTTGGCCTTATGACCAGTGAGAACTCTCTCCCTGGTCTCTGCCAGCCCAAGCATC
ACTGCCCGAGGCGCCAGCTCAGTTTCACCGTCCACGTCCACAAGGGGCTTTTCCCACCTTCACCTTTGTCGCTGGGTCAGTGCTGGAAAG
CGCCCCTCACTCCTGCGCTGACAAGGGCCCTTCTCTACTGTCTGTGGGGTGGTTCCGGGCTGGGGGGGCTGCCTCCTTTGCACCTGATTT
TGAAGGTGTCTCTTTCATCCATGGTTAAGTCATAAAAAGCTTATTGGTTTTGGTTTTGACTCACCTGAAAGTTTTTTTGGTTTAAAAGAA
GAATAGGCGGGGCACGGTGGCTCATGCCTGTAATCCCAGCACTTTGGGAGGCTGAGGCAGGTGGATCACGAGGTCAGGAGATCGACACCA
TCCTGGCTAACACGGTGAAACCCCGTCTCTACTAAAAAATACAAAAAATTAGCTGGGTGTGGTGGTGGGGGTGGGCGCCTGTAGTCCCAG
CTACGTGGGAGGCTGAGGCAGCAGACTGGTGTGAACCCGGGAGGTGGAGCTTGCAGTGAGCCGAGATCGCGCCACTGCACTCCAGCCTGG

>In-frame_SGSM2_ENST00000426855_chr17_2241039_+_PTK6_ENST00000542869_chr20_62165057_-_1263nt
AAGATGGCTGCGGAGCCGAGCACCGGGCAGTGGCTGCGGCGGCGGCGGCGGCGGCGGGCCGGGAGCGCGGCGGGCGGGGGCTCCGCCTTG
CGCGTGGGGCGCTGAGCCGAGAGGCGCGGAGGCGGCGAGGGCGCGGGGGCTCTGAGGACCGCTCGGCGCCGCCTCCTGCCACACCATGGG
CAGCGCAGAGGACGCAGTCAAAGAGAAACTGCTGTGGAACGTGAAGAAGGAGCACGAGCCTGAGCCCCTGCCCCATTGGGATGACTGGGA
GAGGCCGAGGGAGGAGTTCACGCTCTGCAGGAAGCTGGGGTCCGGCTACTTTGGGGAGGTCTTCGAGGGGCTCTGGAAAGACCGGGTCCA
GGTGGCCATTAAGGTGATTTCTCGAGACAACCTCCTGCACCAGCAGATGCTGCAGTCGGAGATCCAGGCCATGAAGAAGCTGCGGCACAA
ACACATCCTGGCGCTGTACGCCGTGGTGTCCGTGGGGGACCCCGTGTACATCATCACGGAGCTCATGGCCAAGGGCAGCCTGCTGGAGCT
GCTCCGCGACTCTGATGAGAAAGTCCTGCCCGTTTCGGAGCTGCTGGACATCGCCTGGCAGGTGGCTGAGGGCATGTGTTACCTGGAGTC
GCAGAATTACATCCACCGGGACCTGGCCGCCAGGAACATCCTCGTCGGGGAAAACACCCTCTGCAAAGTTGGGGACTTCGGGTTAGCCAG
GCTTATCAAGGAGGACGTCTACCTCTCCCATGACCACAATATCCCCTACAAGTGGACGGCCCCTGAAGCGCTCTCCCGAGGCCATTACTC
CACCAAATCCGACGTCTGGTCCTTTGGGATTCTCCTGCATGAGATGTTCAGCAGGGGTCAGGTGCCCTACCCAGGCATGTCCAACCATGA
GGCCTTCCTGAGGGTGGACGCCGGCTACCGCATGCCCTGCCCTCTGGAGTGCCCGCCCAGCGTGCACAAGCTGATGCTGACATGCTGGTG
CAGGGACCCCGAGCAGAGACCCTGCTTCAAGGCCCTGCGGGAGAGGCTCTCCAGCTTCACCAGCTACGAGAACCCGACCTGAGCTGCTGT
GGAGCGGGCATGGCCGGGCCCTGCTGAGGAGGGGCCTGGGCAGAGGGCCTGGACCTGGGATCAAGGCCCACGCGCTTCCCTGGGGTTTAC
TGAGGTGATGGGTGCAGGAAAGGTTCACAAATGTGGAGTGTCTGCGTCCAATACACGCGTGTGCTCCTCTCCTTACTCCATCGTGTGTGC

>In-frame_SGSM2_ENST00000574563_chr17_2241039_+_PTK6_ENST00000217185_chr20_62165057_-_2075nt
GAGAGGCGCGGAGGCGGCGAGGGCGCGGGGGCTCTGAGGACCGCTCGGCGCCGCCTCCTGCCACACCATGGGCAGCGCAGAGGACGCAGT
CAAAGAGAAACTGCTGTGGAACGTGAAGAAGGAGCACGAGCCTGAGCCCCTGCCCCATTGGGATGACTGGGAGAGGCCGAGGGAGGAGTT
CACGCTCTGCAGGAAGCTGGGGTCCGGCTACTTTGGGGAGGTCTTCGAGGGGCTCTGGAAAGACCGGGTCCAGGTGGCCATTAAGGTGAT
TTCTCGAGACAACCTCCTGCACCAGCAGATGCTGCAGTCGGAGATCCAGGCCATGAAGAAGCTGCGGCACAAACACATCCTGGCGCTGTA
CGCCGTGGTGTCCGTGGGGGACCCCGTGTACATCATCACGGAGCTCATGGCCAAGGGCAGCCTGCTGGAGCTGCTCCGCGACTCTGATGA
GAAAGTCCTGCCCGTTTCGGAGCTGCTGGACATCGCCTGGCAGGTGGCTGAGGGCATGTGTTACCTGGAGTCGCAGAATTACATCCACCG
GGACCTGGCCGCCAGGAACATCCTCGTCGGGGAAAACACCCTCTGCAAAGTTGGGGACTTCGGGTTAGCCAGGCTTATCAAGGAGGACGT
CTACCTCTCCCATGACCACAATATCCCCTACAAGTGGACGGCCCCTGAAGCGCTCTCCCGAGGCCATTACTCCACCAAATCCGACGTCTG
GTCCTTTGGGATTCTCCTGCATGAGATGTTCAGCAGGGGTCAGGTGCCCTACCCAGGCATGTCCAACCATGAGGCCTTCCTGAGGGTGGA
CGCCGGCTACCGCATGCCCTGCCCTCTGGAGTGCCCGCCCAGCGTGCACAAGCTGATGCTGACATGCTGGTGCAGGGACCCCGAGCAGAG
ACCCTGCTTCAAGGCCCTGCGGGAGAGGCTCTCCAGCTTCACCAGCTACGAGAACCCGACCTGAGCTGCTGTGGAGCGGGCATGGCCGGG
CCCTGCTGAGGAGGGGCCTGGGCAGAGGGCCTGGACCTGGGATCAAGGCCCACGCGCTTCCCTGGGGTTTACTGAGGTGATGGGTGCAGG
AAAGGTTCACAAATGTGGAGTGTCTGCGTCCAATACACGCGTGTGCTCCTCTCCTTACTCCATCGTGTGTGCCTTGGGTCTCAGCTGCTG
ACACGCAGCCTGCTCTGGAGCCTGCAGATGAGATCCGGGAGACTGACACGAAGCCAGCAGAGGTCAGAGGGGACTCTGACCACAGCCCGC
TCTCTGGCTGTCTGTCTGCAGTGCCCGGCTGAGGGTGGGAGGCAAACACGCCTTGTTCCTGCTCTTCCCAGTTCAGCTTGGTGGGAGAAA
GTCATTCGCGTGGCTCGGGACGCTCATGTAAATTTGGTTTTGGTGCTCAAGGGTTCTTTCCTCCCAGGGGCAGGTGTTTCTTTCCTGTTT
GTCTTGTGTCTTGAGAGCTTGGCCTTATGACCAGTGAGAACTCTCTCCCTGGTCTCTGCCAGCCCAAGCATCACTGCCCGAGGCGCCAGC
TCAGTTTCACCGTCCACGTCCACAAGGGGCTTTTCCCACCTTCACCTTTGTCGCTGGGTCAGTGCTGGAAAGCGCCCCTCACTCCTGCGC
TGACAAGGGCCCTTCTCTACTGTCTGTGGGGTGGTTCCGGGCTGGGGGGGCTGCCTCCTTTGCACCTGATTTTGAAGGTGTCTCTTTCAT
CCATGGTTAAGTCATAAAAAGCTTATTGGTTTTGGTTTTGACTCACCTGAAAGTTTTTTTGGTTTAAAAGAAGAATAGGCGGGGCACGGT
GGCTCATGCCTGTAATCCCAGCACTTTGGGAGGCTGAGGCAGGTGGATCACGAGGTCAGGAGATCGACACCATCCTGGCTAACACGGTGA
AACCCCGTCTCTACTAAAAAATACAAAAAATTAGCTGGGTGTGGTGGTGGGGGTGGGCGCCTGTAGTCCCAGCTACGTGGGAGGCTGAGG
CAGCAGACTGGTGTGAACCCGGGAGGTGGAGCTTGCAGTGAGCCGAGATCGCGCCACTGCACTCCAGCCTGGGCGACAGAGCGAGACTCC

>In-frame_SGSM2_ENST00000574563_chr17_2241039_+_PTK6_ENST00000542869_chr20_62165057_-_1155nt
GAGAGGCGCGGAGGCGGCGAGGGCGCGGGGGCTCTGAGGACCGCTCGGCGCCGCCTCCTGCCACACCATGGGCAGCGCAGAGGACGCAGT
CAAAGAGAAACTGCTGTGGAACGTGAAGAAGGAGCACGAGCCTGAGCCCCTGCCCCATTGGGATGACTGGGAGAGGCCGAGGGAGGAGTT
CACGCTCTGCAGGAAGCTGGGGTCCGGCTACTTTGGGGAGGTCTTCGAGGGGCTCTGGAAAGACCGGGTCCAGGTGGCCATTAAGGTGAT
TTCTCGAGACAACCTCCTGCACCAGCAGATGCTGCAGTCGGAGATCCAGGCCATGAAGAAGCTGCGGCACAAACACATCCTGGCGCTGTA
CGCCGTGGTGTCCGTGGGGGACCCCGTGTACATCATCACGGAGCTCATGGCCAAGGGCAGCCTGCTGGAGCTGCTCCGCGACTCTGATGA
GAAAGTCCTGCCCGTTTCGGAGCTGCTGGACATCGCCTGGCAGGTGGCTGAGGGCATGTGTTACCTGGAGTCGCAGAATTACATCCACCG
GGACCTGGCCGCCAGGAACATCCTCGTCGGGGAAAACACCCTCTGCAAAGTTGGGGACTTCGGGTTAGCCAGGCTTATCAAGGAGGACGT
CTACCTCTCCCATGACCACAATATCCCCTACAAGTGGACGGCCCCTGAAGCGCTCTCCCGAGGCCATTACTCCACCAAATCCGACGTCTG
GTCCTTTGGGATTCTCCTGCATGAGATGTTCAGCAGGGGTCAGGTGCCCTACCCAGGCATGTCCAACCATGAGGCCTTCCTGAGGGTGGA
CGCCGGCTACCGCATGCCCTGCCCTCTGGAGTGCCCGCCCAGCGTGCACAAGCTGATGCTGACATGCTGGTGCAGGGACCCCGAGCAGAG
ACCCTGCTTCAAGGCCCTGCGGGAGAGGCTCTCCAGCTTCACCAGCTACGAGAACCCGACCTGAGCTGCTGTGGAGCGGGCATGGCCGGG
CCCTGCTGAGGAGGGGCCTGGGCAGAGGGCCTGGACCTGGGATCAAGGCCCACGCGCTTCCCTGGGGTTTACTGAGGTGATGGGTGCAGG


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FusionGenePPI for SGSM2_PTK6


check button Go to ChiPPI (Chimeric Protein-Protein interactions) to see the chimeric PPI interaction in

ChiPPI page

.

check button Protein-protein interactors with each fusion partner protein in wild-type (BIOGRID-3.4.160)
HgeneHgene's interactorsTgeneTgene's interactors
SGSM2AFP, CELSR3, KHDRBS3, RGMA, RPS25, CA12, CHD3, EGFR, GDPD2, PNO1, MPP1, FNBP1L, PTN, CETN1, PTPRNPTK6STAP2, EGFR, KHDRBS1, ERBB3, APP, ERBB2, PTK6, FGFR1, DOK1, HSP90AA1, ADAM15, REL, WASL, EXOC5, FCHO1, CCDC33, EFHC2, KHDRBS2, SOCS3, CCT3, CCT4, CCT8, TCP1, TRIM25, LINC01139, HIF1A


check button - Retained PPIs in in-frame fusion.
PartnerGeneHbpTbpENSTStrandBPexonTotalExonProtein feature loci*BPlociTotalLenStill interaction with


check button - Lost PPIs in in-frame fusion.
PartnerGeneHbpTbpENSTStrandBPexonTotalExonProtein feature loci*BPlociTotalLenInteraction lost with


check button - Retained PPIs, but lost function due to frame-shift fusion.
PartnerGeneHbpTbpENSTStrandBPexonTotalExonProtein feature loci*BPlociTotalLenInteraction lost with


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RelatedDrugs for SGSM2_PTK6


check button Drugs targeting genes involved in this fusion gene.
(DrugBank Version 5.1.0 2018-04-02)
PartnerGeneUniProtAccDrugBank IDDrug nameDrug activityDrug typeDrug status
TgenePTK6Q13882DB05294VandetanibProtein-tyrosine kinase 6small moleculeapproved

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RelatedDiseases for SGSM2_PTK6


check button Diseases associated with fusion partners.
(DisGeNet 4.0)
PartnerGeneDisease IDDisease name# pubmedsSource