![]() |
||||||
|
![]() | |
![]() | |
![]() | |
![]() | |
![]() | |
![]() |
Fusion gene ID: 32408 |
FusionGeneSummary for RUNX1_SH3D19 |
![]() |
Fusion gene information | Fusion gene name: RUNX1_SH3D19 | Fusion gene ID: 32408 | Hgene | Tgene | Gene symbol | RUNX1 | SH3D19 | Gene ID | 861 | 152503 |
Gene name | runt related transcription factor 1 | SH3 domain containing 19 | |
Synonyms | AML1|AML1-EVI-1|AMLCR1|CBF2alpha|CBFA2|EVI-1|PEBP2aB|PEBP2alpha | EBP|EVE1|Eve-1|Kryn|SH3P19 | |
Cytomap | 21q22.12 | 4q31.3 | |
Type of gene | protein-coding | protein-coding | |
Description | runt-related transcription factor 1AML1-EVI-1 fusion proteinPEA2-alpha BPEBP2-alpha BSL3-3 enhancer factor 1 alpha B subunitSL3/AKV core-binding factor alpha B subunitacute myeloid leukemia 1 proteincore-binding factor, runt domain, alpha subunit 2 | SH3 domain-containing protein 19ADAM-binding protein Eve-1EEN-binding proteinSH3 domain protein D19 | |
Modification date | 20180527 | 20180522 | |
UniProtAcc | Q01196 | Q5HYK7 | |
Ensembl transtripts involved in fusion gene | ENST00000344691, ENST00000325074, ENST00000437180, ENST00000300305, ENST00000399240, ENST00000486278, ENST00000494829, ENST00000358356, | ENST00000409598, ENST00000424281, ENST00000304527, ENST00000455740, ENST00000409252, ENST00000514152, ENST00000427414, ENST00000604030, | |
Fusion gene scores | * DoF score | 23 X 25 X 7=4025 | 6 X 8 X 8=384 |
# samples | 53 | 12 | |
** MAII score | log2(53/4025*10)=-2.92492451843878 possibly effective Gene in Pan-Cancer Fusion Genes (peGinPCFGs). DoF>8 and MAII<0 | log2(12/384*10)=-1.67807190511264 possibly effective Gene in Pan-Cancer Fusion Genes (peGinPCFGs). DoF>8 and MAII<0 | |
Context | PubMed: RUNX1 [Title/Abstract] AND SH3D19 [Title/Abstract] AND fusion [Title/Abstract] | ||
Functional or gene categories assigned by FusionGDB annotation |
* DoF score (Degree of Frequency) = # partners X # break points X # cancer types ** MAII score (Major Active Isofusion Index) = log2(# samples/DoF score*10) |
![]() |
Partner | Gene | GO ID | GO term | PubMed ID |
Hgene | RUNX1 | GO:0030097 | hemopoiesis | 21873977 |
Hgene | RUNX1 | GO:0045893 | positive regulation of transcription, DNA-templated | 10207087|14970218 |
Hgene | RUNX1 | GO:0045944 | positive regulation of transcription by RNA polymerase II | 9199349|10207087|14970218|21873977 |
![]() (ChiTars (NAR, 2018), tumorfusions (NAR, 2018), Gao et al. (Cell, 2018)) * All genome coordinats were lifted-over on hg19. * Click on the break point to see the gene structure around the break point region using the UCSC Genome Browser. |
Data type | Source | Cancer type | Sample | Hgene | Hchr | Hbp | Hstrand | Tgene | Tchr | Tbp | Tstrand |
ChiTaRS3.1 | EU093086 | RUNX1 | chr21 | 36231771 | - | SH3D19 | chr4 | 152147238 | - | ||
ChiTaRS3.1 | EU093087 | RUNX1 | chr21 | 36206707 | - | SH3D19 | chr4 | 152147239 | - |
* LD: Li Ding group's fusion gene list RV: Roel Verhaak group's fusion gene list ChiTaRs fusion database |
![]() * Click on the break point to see the gene structure around the break point region using the UCSC Genome Browser. |
ORF | Henst | Tenst | Hgene | Hchr | Hbp | Hstrand | Tgene | Tchr | Tbp | Tstrand |
5CDS-5UTR | ENST00000344691 | ENST00000409598 | RUNX1 | chr21 | 36231771 | - | SH3D19 | chr4 | 152147238 | - |
5CDS-5UTR | ENST00000344691 | ENST00000424281 | RUNX1 | chr21 | 36231771 | - | SH3D19 | chr4 | 152147238 | - |
5CDS-5UTR | ENST00000344691 | ENST00000304527 | RUNX1 | chr21 | 36231771 | - | SH3D19 | chr4 | 152147238 | - |
5CDS-5UTR | ENST00000344691 | ENST00000455740 | RUNX1 | chr21 | 36231771 | - | SH3D19 | chr4 | 152147238 | - |
5CDS-intron | ENST00000344691 | ENST00000409252 | RUNX1 | chr21 | 36231771 | - | SH3D19 | chr4 | 152147238 | - |
5CDS-5UTR | ENST00000344691 | ENST00000514152 | RUNX1 | chr21 | 36231771 | - | SH3D19 | chr4 | 152147238 | - |
5CDS-intron | ENST00000344691 | ENST00000427414 | RUNX1 | chr21 | 36231771 | - | SH3D19 | chr4 | 152147238 | - |
5CDS-5UTR | ENST00000344691 | ENST00000604030 | RUNX1 | chr21 | 36231771 | - | SH3D19 | chr4 | 152147238 | - |
5CDS-5UTR | ENST00000325074 | ENST00000409598 | RUNX1 | chr21 | 36231771 | - | SH3D19 | chr4 | 152147238 | - |
5CDS-5UTR | ENST00000325074 | ENST00000424281 | RUNX1 | chr21 | 36231771 | - | SH3D19 | chr4 | 152147238 | - |
5CDS-5UTR | ENST00000325074 | ENST00000304527 | RUNX1 | chr21 | 36231771 | - | SH3D19 | chr4 | 152147238 | - |
5CDS-5UTR | ENST00000325074 | ENST00000455740 | RUNX1 | chr21 | 36231771 | - | SH3D19 | chr4 | 152147238 | - |
5CDS-intron | ENST00000325074 | ENST00000409252 | RUNX1 | chr21 | 36231771 | - | SH3D19 | chr4 | 152147238 | - |
5CDS-5UTR | ENST00000325074 | ENST00000514152 | RUNX1 | chr21 | 36231771 | - | SH3D19 | chr4 | 152147238 | - |
5CDS-intron | ENST00000325074 | ENST00000427414 | RUNX1 | chr21 | 36231771 | - | SH3D19 | chr4 | 152147238 | - |
5CDS-5UTR | ENST00000325074 | ENST00000604030 | RUNX1 | chr21 | 36231771 | - | SH3D19 | chr4 | 152147238 | - |
5CDS-5UTR | ENST00000437180 | ENST00000409598 | RUNX1 | chr21 | 36231771 | - | SH3D19 | chr4 | 152147238 | - |
5CDS-5UTR | ENST00000437180 | ENST00000424281 | RUNX1 | chr21 | 36231771 | - | SH3D19 | chr4 | 152147238 | - |
5CDS-5UTR | ENST00000437180 | ENST00000304527 | RUNX1 | chr21 | 36231771 | - | SH3D19 | chr4 | 152147238 | - |
5CDS-5UTR | ENST00000437180 | ENST00000455740 | RUNX1 | chr21 | 36231771 | - | SH3D19 | chr4 | 152147238 | - |
5CDS-intron | ENST00000437180 | ENST00000409252 | RUNX1 | chr21 | 36231771 | - | SH3D19 | chr4 | 152147238 | - |
5CDS-5UTR | ENST00000437180 | ENST00000514152 | RUNX1 | chr21 | 36231771 | - | SH3D19 | chr4 | 152147238 | - |
5CDS-intron | ENST00000437180 | ENST00000427414 | RUNX1 | chr21 | 36231771 | - | SH3D19 | chr4 | 152147238 | - |
5CDS-5UTR | ENST00000437180 | ENST00000604030 | RUNX1 | chr21 | 36231771 | - | SH3D19 | chr4 | 152147238 | - |
5CDS-5UTR | ENST00000300305 | ENST00000409598 | RUNX1 | chr21 | 36231771 | - | SH3D19 | chr4 | 152147238 | - |
5CDS-5UTR | ENST00000300305 | ENST00000424281 | RUNX1 | chr21 | 36231771 | - | SH3D19 | chr4 | 152147238 | - |
5CDS-5UTR | ENST00000300305 | ENST00000304527 | RUNX1 | chr21 | 36231771 | - | SH3D19 | chr4 | 152147238 | - |
5CDS-5UTR | ENST00000300305 | ENST00000455740 | RUNX1 | chr21 | 36231771 | - | SH3D19 | chr4 | 152147238 | - |
5CDS-intron | ENST00000300305 | ENST00000409252 | RUNX1 | chr21 | 36231771 | - | SH3D19 | chr4 | 152147238 | - |
5CDS-5UTR | ENST00000300305 | ENST00000514152 | RUNX1 | chr21 | 36231771 | - | SH3D19 | chr4 | 152147238 | - |
5CDS-intron | ENST00000300305 | ENST00000427414 | RUNX1 | chr21 | 36231771 | - | SH3D19 | chr4 | 152147238 | - |
5CDS-5UTR | ENST00000300305 | ENST00000604030 | RUNX1 | chr21 | 36231771 | - | SH3D19 | chr4 | 152147238 | - |
5CDS-5UTR | ENST00000399240 | ENST00000409598 | RUNX1 | chr21 | 36231771 | - | SH3D19 | chr4 | 152147238 | - |
5CDS-5UTR | ENST00000399240 | ENST00000424281 | RUNX1 | chr21 | 36231771 | - | SH3D19 | chr4 | 152147238 | - |
5CDS-5UTR | ENST00000399240 | ENST00000304527 | RUNX1 | chr21 | 36231771 | - | SH3D19 | chr4 | 152147238 | - |
5CDS-5UTR | ENST00000399240 | ENST00000455740 | RUNX1 | chr21 | 36231771 | - | SH3D19 | chr4 | 152147238 | - |
5CDS-intron | ENST00000399240 | ENST00000409252 | RUNX1 | chr21 | 36231771 | - | SH3D19 | chr4 | 152147238 | - |
5CDS-5UTR | ENST00000399240 | ENST00000514152 | RUNX1 | chr21 | 36231771 | - | SH3D19 | chr4 | 152147238 | - |
5CDS-intron | ENST00000399240 | ENST00000427414 | RUNX1 | chr21 | 36231771 | - | SH3D19 | chr4 | 152147238 | - |
5CDS-5UTR | ENST00000399240 | ENST00000604030 | RUNX1 | chr21 | 36231771 | - | SH3D19 | chr4 | 152147238 | - |
5CDS-5UTR | ENST00000486278 | ENST00000409598 | RUNX1 | chr21 | 36231771 | - | SH3D19 | chr4 | 152147238 | - |
5CDS-5UTR | ENST00000486278 | ENST00000424281 | RUNX1 | chr21 | 36231771 | - | SH3D19 | chr4 | 152147238 | - |
5CDS-5UTR | ENST00000486278 | ENST00000304527 | RUNX1 | chr21 | 36231771 | - | SH3D19 | chr4 | 152147238 | - |
5CDS-5UTR | ENST00000486278 | ENST00000455740 | RUNX1 | chr21 | 36231771 | - | SH3D19 | chr4 | 152147238 | - |
5CDS-intron | ENST00000486278 | ENST00000409252 | RUNX1 | chr21 | 36231771 | - | SH3D19 | chr4 | 152147238 | - |
5CDS-5UTR | ENST00000486278 | ENST00000514152 | RUNX1 | chr21 | 36231771 | - | SH3D19 | chr4 | 152147238 | - |
5CDS-intron | ENST00000486278 | ENST00000427414 | RUNX1 | chr21 | 36231771 | - | SH3D19 | chr4 | 152147238 | - |
5CDS-5UTR | ENST00000486278 | ENST00000604030 | RUNX1 | chr21 | 36231771 | - | SH3D19 | chr4 | 152147238 | - |
intron-5UTR | ENST00000494829 | ENST00000409598 | RUNX1 | chr21 | 36231771 | - | SH3D19 | chr4 | 152147238 | - |
intron-5UTR | ENST00000494829 | ENST00000424281 | RUNX1 | chr21 | 36231771 | - | SH3D19 | chr4 | 152147238 | - |
intron-5UTR | ENST00000494829 | ENST00000304527 | RUNX1 | chr21 | 36231771 | - | SH3D19 | chr4 | 152147238 | - |
intron-5UTR | ENST00000494829 | ENST00000455740 | RUNX1 | chr21 | 36231771 | - | SH3D19 | chr4 | 152147238 | - |
intron-intron | ENST00000494829 | ENST00000409252 | RUNX1 | chr21 | 36231771 | - | SH3D19 | chr4 | 152147238 | - |
intron-5UTR | ENST00000494829 | ENST00000514152 | RUNX1 | chr21 | 36231771 | - | SH3D19 | chr4 | 152147238 | - |
intron-intron | ENST00000494829 | ENST00000427414 | RUNX1 | chr21 | 36231771 | - | SH3D19 | chr4 | 152147238 | - |
intron-5UTR | ENST00000494829 | ENST00000604030 | RUNX1 | chr21 | 36231771 | - | SH3D19 | chr4 | 152147238 | - |
5CDS-5UTR | ENST00000358356 | ENST00000409598 | RUNX1 | chr21 | 36231771 | - | SH3D19 | chr4 | 152147238 | - |
5CDS-5UTR | ENST00000358356 | ENST00000424281 | RUNX1 | chr21 | 36231771 | - | SH3D19 | chr4 | 152147238 | - |
5CDS-5UTR | ENST00000358356 | ENST00000304527 | RUNX1 | chr21 | 36231771 | - | SH3D19 | chr4 | 152147238 | - |
5CDS-5UTR | ENST00000358356 | ENST00000455740 | RUNX1 | chr21 | 36231771 | - | SH3D19 | chr4 | 152147238 | - |
5CDS-intron | ENST00000358356 | ENST00000409252 | RUNX1 | chr21 | 36231771 | - | SH3D19 | chr4 | 152147238 | - |
5CDS-5UTR | ENST00000358356 | ENST00000514152 | RUNX1 | chr21 | 36231771 | - | SH3D19 | chr4 | 152147238 | - |
5CDS-intron | ENST00000358356 | ENST00000427414 | RUNX1 | chr21 | 36231771 | - | SH3D19 | chr4 | 152147238 | - |
5CDS-5UTR | ENST00000358356 | ENST00000604030 | RUNX1 | chr21 | 36231771 | - | SH3D19 | chr4 | 152147238 | - |
5CDS-5UTR | ENST00000344691 | ENST00000409598 | RUNX1 | chr21 | 36206707 | - | SH3D19 | chr4 | 152147239 | - |
5CDS-5UTR | ENST00000344691 | ENST00000424281 | RUNX1 | chr21 | 36206707 | - | SH3D19 | chr4 | 152147239 | - |
5CDS-5UTR | ENST00000344691 | ENST00000304527 | RUNX1 | chr21 | 36206707 | - | SH3D19 | chr4 | 152147239 | - |
5CDS-5UTR | ENST00000344691 | ENST00000455740 | RUNX1 | chr21 | 36206707 | - | SH3D19 | chr4 | 152147239 | - |
5CDS-intron | ENST00000344691 | ENST00000409252 | RUNX1 | chr21 | 36206707 | - | SH3D19 | chr4 | 152147239 | - |
5CDS-5UTR | ENST00000344691 | ENST00000514152 | RUNX1 | chr21 | 36206707 | - | SH3D19 | chr4 | 152147239 | - |
5CDS-intron | ENST00000344691 | ENST00000427414 | RUNX1 | chr21 | 36206707 | - | SH3D19 | chr4 | 152147239 | - |
5CDS-5UTR | ENST00000344691 | ENST00000604030 | RUNX1 | chr21 | 36206707 | - | SH3D19 | chr4 | 152147239 | - |
5CDS-5UTR | ENST00000325074 | ENST00000409598 | RUNX1 | chr21 | 36206707 | - | SH3D19 | chr4 | 152147239 | - |
5CDS-5UTR | ENST00000325074 | ENST00000424281 | RUNX1 | chr21 | 36206707 | - | SH3D19 | chr4 | 152147239 | - |
5CDS-5UTR | ENST00000325074 | ENST00000304527 | RUNX1 | chr21 | 36206707 | - | SH3D19 | chr4 | 152147239 | - |
5CDS-5UTR | ENST00000325074 | ENST00000455740 | RUNX1 | chr21 | 36206707 | - | SH3D19 | chr4 | 152147239 | - |
5CDS-intron | ENST00000325074 | ENST00000409252 | RUNX1 | chr21 | 36206707 | - | SH3D19 | chr4 | 152147239 | - |
5CDS-5UTR | ENST00000325074 | ENST00000514152 | RUNX1 | chr21 | 36206707 | - | SH3D19 | chr4 | 152147239 | - |
5CDS-intron | ENST00000325074 | ENST00000427414 | RUNX1 | chr21 | 36206707 | - | SH3D19 | chr4 | 152147239 | - |
5CDS-5UTR | ENST00000325074 | ENST00000604030 | RUNX1 | chr21 | 36206707 | - | SH3D19 | chr4 | 152147239 | - |
5CDS-5UTR | ENST00000437180 | ENST00000409598 | RUNX1 | chr21 | 36206707 | - | SH3D19 | chr4 | 152147239 | - |
5CDS-5UTR | ENST00000437180 | ENST00000424281 | RUNX1 | chr21 | 36206707 | - | SH3D19 | chr4 | 152147239 | - |
5CDS-5UTR | ENST00000437180 | ENST00000304527 | RUNX1 | chr21 | 36206707 | - | SH3D19 | chr4 | 152147239 | - |
5CDS-5UTR | ENST00000437180 | ENST00000455740 | RUNX1 | chr21 | 36206707 | - | SH3D19 | chr4 | 152147239 | - |
5CDS-intron | ENST00000437180 | ENST00000409252 | RUNX1 | chr21 | 36206707 | - | SH3D19 | chr4 | 152147239 | - |
5CDS-5UTR | ENST00000437180 | ENST00000514152 | RUNX1 | chr21 | 36206707 | - | SH3D19 | chr4 | 152147239 | - |
5CDS-intron | ENST00000437180 | ENST00000427414 | RUNX1 | chr21 | 36206707 | - | SH3D19 | chr4 | 152147239 | - |
5CDS-5UTR | ENST00000437180 | ENST00000604030 | RUNX1 | chr21 | 36206707 | - | SH3D19 | chr4 | 152147239 | - |
5CDS-5UTR | ENST00000300305 | ENST00000409598 | RUNX1 | chr21 | 36206707 | - | SH3D19 | chr4 | 152147239 | - |
5CDS-5UTR | ENST00000300305 | ENST00000424281 | RUNX1 | chr21 | 36206707 | - | SH3D19 | chr4 | 152147239 | - |
5CDS-5UTR | ENST00000300305 | ENST00000304527 | RUNX1 | chr21 | 36206707 | - | SH3D19 | chr4 | 152147239 | - |
5CDS-5UTR | ENST00000300305 | ENST00000455740 | RUNX1 | chr21 | 36206707 | - | SH3D19 | chr4 | 152147239 | - |
5CDS-intron | ENST00000300305 | ENST00000409252 | RUNX1 | chr21 | 36206707 | - | SH3D19 | chr4 | 152147239 | - |
5CDS-5UTR | ENST00000300305 | ENST00000514152 | RUNX1 | chr21 | 36206707 | - | SH3D19 | chr4 | 152147239 | - |
5CDS-intron | ENST00000300305 | ENST00000427414 | RUNX1 | chr21 | 36206707 | - | SH3D19 | chr4 | 152147239 | - |
5CDS-5UTR | ENST00000300305 | ENST00000604030 | RUNX1 | chr21 | 36206707 | - | SH3D19 | chr4 | 152147239 | - |
intron-5UTR | ENST00000399240 | ENST00000409598 | RUNX1 | chr21 | 36206707 | - | SH3D19 | chr4 | 152147239 | - |
intron-5UTR | ENST00000399240 | ENST00000424281 | RUNX1 | chr21 | 36206707 | - | SH3D19 | chr4 | 152147239 | - |
intron-5UTR | ENST00000399240 | ENST00000304527 | RUNX1 | chr21 | 36206707 | - | SH3D19 | chr4 | 152147239 | - |
intron-5UTR | ENST00000399240 | ENST00000455740 | RUNX1 | chr21 | 36206707 | - | SH3D19 | chr4 | 152147239 | - |
intron-intron | ENST00000399240 | ENST00000409252 | RUNX1 | chr21 | 36206707 | - | SH3D19 | chr4 | 152147239 | - |
intron-5UTR | ENST00000399240 | ENST00000514152 | RUNX1 | chr21 | 36206707 | - | SH3D19 | chr4 | 152147239 | - |
intron-intron | ENST00000399240 | ENST00000427414 | RUNX1 | chr21 | 36206707 | - | SH3D19 | chr4 | 152147239 | - |
intron-5UTR | ENST00000399240 | ENST00000604030 | RUNX1 | chr21 | 36206707 | - | SH3D19 | chr4 | 152147239 | - |
intron-5UTR | ENST00000486278 | ENST00000409598 | RUNX1 | chr21 | 36206707 | - | SH3D19 | chr4 | 152147239 | - |
intron-5UTR | ENST00000486278 | ENST00000424281 | RUNX1 | chr21 | 36206707 | - | SH3D19 | chr4 | 152147239 | - |
intron-5UTR | ENST00000486278 | ENST00000304527 | RUNX1 | chr21 | 36206707 | - | SH3D19 | chr4 | 152147239 | - |
intron-5UTR | ENST00000486278 | ENST00000455740 | RUNX1 | chr21 | 36206707 | - | SH3D19 | chr4 | 152147239 | - |
intron-intron | ENST00000486278 | ENST00000409252 | RUNX1 | chr21 | 36206707 | - | SH3D19 | chr4 | 152147239 | - |
intron-5UTR | ENST00000486278 | ENST00000514152 | RUNX1 | chr21 | 36206707 | - | SH3D19 | chr4 | 152147239 | - |
intron-intron | ENST00000486278 | ENST00000427414 | RUNX1 | chr21 | 36206707 | - | SH3D19 | chr4 | 152147239 | - |
intron-5UTR | ENST00000486278 | ENST00000604030 | RUNX1 | chr21 | 36206707 | - | SH3D19 | chr4 | 152147239 | - |
intron-5UTR | ENST00000494829 | ENST00000409598 | RUNX1 | chr21 | 36206707 | - | SH3D19 | chr4 | 152147239 | - |
intron-5UTR | ENST00000494829 | ENST00000424281 | RUNX1 | chr21 | 36206707 | - | SH3D19 | chr4 | 152147239 | - |
intron-5UTR | ENST00000494829 | ENST00000304527 | RUNX1 | chr21 | 36206707 | - | SH3D19 | chr4 | 152147239 | - |
intron-5UTR | ENST00000494829 | ENST00000455740 | RUNX1 | chr21 | 36206707 | - | SH3D19 | chr4 | 152147239 | - |
intron-intron | ENST00000494829 | ENST00000409252 | RUNX1 | chr21 | 36206707 | - | SH3D19 | chr4 | 152147239 | - |
intron-5UTR | ENST00000494829 | ENST00000514152 | RUNX1 | chr21 | 36206707 | - | SH3D19 | chr4 | 152147239 | - |
intron-intron | ENST00000494829 | ENST00000427414 | RUNX1 | chr21 | 36206707 | - | SH3D19 | chr4 | 152147239 | - |
intron-5UTR | ENST00000494829 | ENST00000604030 | RUNX1 | chr21 | 36206707 | - | SH3D19 | chr4 | 152147239 | - |
5CDS-5UTR | ENST00000358356 | ENST00000409598 | RUNX1 | chr21 | 36206707 | - | SH3D19 | chr4 | 152147239 | - |
5CDS-5UTR | ENST00000358356 | ENST00000424281 | RUNX1 | chr21 | 36206707 | - | SH3D19 | chr4 | 152147239 | - |
5CDS-5UTR | ENST00000358356 | ENST00000304527 | RUNX1 | chr21 | 36206707 | - | SH3D19 | chr4 | 152147239 | - |
5CDS-5UTR | ENST00000358356 | ENST00000455740 | RUNX1 | chr21 | 36206707 | - | SH3D19 | chr4 | 152147239 | - |
5CDS-intron | ENST00000358356 | ENST00000409252 | RUNX1 | chr21 | 36206707 | - | SH3D19 | chr4 | 152147239 | - |
5CDS-5UTR | ENST00000358356 | ENST00000514152 | RUNX1 | chr21 | 36206707 | - | SH3D19 | chr4 | 152147239 | - |
5CDS-intron | ENST00000358356 | ENST00000427414 | RUNX1 | chr21 | 36206707 | - | SH3D19 | chr4 | 152147239 | - |
5CDS-5UTR | ENST00000358356 | ENST00000604030 | RUNX1 | chr21 | 36206707 | - | SH3D19 | chr4 | 152147239 | - |
Top |
FusionProtFeatures for RUNX1_SH3D19 |
![]() |
Hgene | Tgene |
RUNX1 | SH3D19 |
May play a role in regulating A disintegrin andmetalloproteases (ADAMs) in the signaling of EGFR-ligand shedding.May be involved in suppression of Ras-induced cellulartransformation and Ras-mediated activation of ELK1. Plays a rolein the regulation of cell morphology and cytoskeletalorganization. {ECO:0000269|PubMed:14551139,ECO:0000269|PubMed:15280379, ECO:0000269|PubMed:21834987}. |
![]() * Minus value of BPloci means that the break pointn is located before the CDS. |
- In-frame and retained protein feature among the 13 regional features. |
Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Protein feature | Protein feature note |
- In-frame and not-retained protein feature among the 13 regional features. |
Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Protein feature | Protein feature note |
Top |
FusionGeneSequence for RUNX1_SH3D19 |
![]() (nt: nucleotides, aa: amino acids) |
* Fusion amino acid sequences. |
* Fusion transcript sequences (only coding sequence (CDS) region). |
* Fusion transcript sequences (Full-length transcript). |
Top |
FusionGenePPI for RUNX1_SH3D19 |
![]() |
![]() |
Hgene | Hgene's interactors | Tgene | Tgene's interactors |
RUNX1 | SUV39H1, KAT6B, CBFB, AES, PAX5, YAP1, JUN, FOS, SMAD3, SMAD1, SMAD2, SMAD5, VDR, ELF4, ELF2, CEBPB, TLE1, CBFA2T2, TRAF6, FHL2, MYOD1, HIPK2, EP300, HDAC1, HDAC3, KAT6A, TCF12, TCF3, RUNX1T1, NCOR1, SIAH1, UBE2L6, RUNX1, PML, RARA, HDAC2, SIN3A, NR4A2, TRIM33, STUB1, SMARCA4, SMARCB1, SMARCC1, CDK1, TAL1, COPRS, KMT2A, RBM14, SPEN, DNMT1, ELAVL1, CBFA2T3, PRMT1, HLA-DMA, CREBBP, UXT, CTBP2, NOTCH1, MYC, NCOR2, FOXP3, SOX2, CTBP1, HDAC11, RAG1, SPI1, ELF1, CDK6, KLF6, NFATC1, NFATC2, ZNF131, BRCA1, CDK9, FANCD2 | SH3D19 | SH3YL1, GRB2, CDC42, ELAVL1, SH3KBP1, NPHP1, CDH1 |
![]() |
Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Still interaction with |
![]() |
Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Interaction lost with |
![]() |
Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Interaction lost with |
Top |
RelatedDrugs for RUNX1_SH3D19 |
![]() (DrugBank Version 5.1.0 2018-04-02) |
Partner | Gene | UniProtAcc | DrugBank ID | Drug name | Drug activity | Drug type | Drug status |
Top |
RelatedDiseases for RUNX1_SH3D19 |
![]() (DisGeNet 4.0) |
Partner | Gene | Disease ID | Disease name | # pubmeds | Source |
Hgene | RUNX1 | C0023467 | Leukemia, Myelocytic, Acute | 2 | CTD_human;HPO |
Hgene | RUNX1 | C0023485 | Precursor B-Cell Lymphoblastic Leukemia-Lymphoma | 2 | CTD_human |
Hgene | RUNX1 | C0003873 | Rheumatoid Arthritis | 1 | CTD_human |
Hgene | RUNX1 | C0017636 | Glioblastoma | 1 | CTD_human |
Hgene | RUNX1 | C0033578 | Prostatic Neoplasms | 1 | CTD_human |
Hgene | RUNX1 | C0349639 | Juvenile Myelomonocytic Leukemia | 1 | CTD_human |
Hgene | RUNX1 | C1832388 | Platelet Disorder, Familial, with Associated Myeloid Malignancy | 1 | CTD_human;ORPHANET;UNIPROT |
Hgene | RUNX1 | C1961102 | Precursor Cell Lymphoblastic Leukemia Lymphoma | 1 | CTD_human |