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Fusion gene ID: 32113 |
FusionGeneSummary for RPS4X_CPB1 |
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Fusion gene information | Fusion gene name: RPS4X_CPB1 | Fusion gene ID: 32113 | Hgene | Tgene | Gene symbol | RPS4X | CPB1 | Gene ID | 6191 | 1360 |
Gene name | ribosomal protein S4 X-linked | carboxypeptidase B1 | |
Synonyms | CCG2|DXS306|RPS4|S4|SCAR|SCR10 | CPB|PASP|PCPB | |
Cytomap | Xq13.1 | 3q24 | |
Type of gene | protein-coding | protein-coding | |
Description | 40S ribosomal protein S4, X isoformcell cycle gene 2ribosomal protein S4X isoformsingle copy abundant mRNA proteinsingle-copy abundant mRNAsmall ribosomal subunit protein eS4 | carboxypeptidase Bcarboxypeptidase B1 (tissue)pancreas-specific proteinpancreatic carboxypeptidase Bprocarboxypeptidase Bprotaminasetissue carboxypeptidase B | |
Modification date | 20180523 | 20180523 | |
UniProtAcc | P62701 | P15086 | |
Ensembl transtripts involved in fusion gene | ENST00000316084, ENST00000486733, ENST00000373626, | ENST00000491148, ENST00000282957, ENST00000498639, | |
Fusion gene scores | * DoF score | 6 X 7 X 2=84 | 21 X 24 X 3=1512 |
# samples | 7 | 19 | |
** MAII score | log2(7/84*10)=-0.263034405833794 possibly effective Gene in Pan-Cancer Fusion Genes (peGinPCFGs). DoF>8 and MAII<0 | log2(19/1512*10)=-2.99238681589013 possibly effective Gene in Pan-Cancer Fusion Genes (peGinPCFGs). DoF>8 and MAII<0 | |
Context | PubMed: RPS4X [Title/Abstract] AND CPB1 [Title/Abstract] AND fusion [Title/Abstract] | ||
Functional or gene categories assigned by FusionGDB annotation |
* DoF score (Degree of Frequency) = # partners X # break points X # cancer types ** MAII score (Major Active Isofusion Index) = log2(# samples/DoF score*10) |
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Partner | Gene | GO ID | GO term | PubMed ID |
![]() (ChiTars (NAR, 2018), tumorfusions (NAR, 2018), Gao et al. (Cell, 2018)) * All genome coordinats were lifted-over on hg19. * Click on the break point to see the gene structure around the break point region using the UCSC Genome Browser. |
Data type | Source | Cancer type | Sample | Hgene | Hchr | Hbp | Hstrand | Tgene | Tchr | Tbp | Tstrand |
TCGA | LD | BRCA | TCGA-A2-A0ER-01A | RPS4X | chrX | 71494903 | - | CPB1 | chr3 | 148562464 | + |
* LD: Li Ding group's fusion gene list RV: Roel Verhaak group's fusion gene list ChiTaRs fusion database |
![]() * Click on the break point to see the gene structure around the break point region using the UCSC Genome Browser. |
ORF | Henst | Tenst | Hgene | Hchr | Hbp | Hstrand | Tgene | Tchr | Tbp | Tstrand |
In-frame | ENST00000316084 | ENST00000491148 | RPS4X | chrX | 71494903 | - | CPB1 | chr3 | 148562464 | + |
In-frame | ENST00000316084 | ENST00000282957 | RPS4X | chrX | 71494903 | - | CPB1 | chr3 | 148562464 | + |
5CDS-intron | ENST00000316084 | ENST00000498639 | RPS4X | chrX | 71494903 | - | CPB1 | chr3 | 148562464 | + |
intron-3CDS | ENST00000486733 | ENST00000491148 | RPS4X | chrX | 71494903 | - | CPB1 | chr3 | 148562464 | + |
intron-3CDS | ENST00000486733 | ENST00000282957 | RPS4X | chrX | 71494903 | - | CPB1 | chr3 | 148562464 | + |
intron-intron | ENST00000486733 | ENST00000498639 | RPS4X | chrX | 71494903 | - | CPB1 | chr3 | 148562464 | + |
In-frame | ENST00000373626 | ENST00000491148 | RPS4X | chrX | 71494903 | - | CPB1 | chr3 | 148562464 | + |
In-frame | ENST00000373626 | ENST00000282957 | RPS4X | chrX | 71494903 | - | CPB1 | chr3 | 148562464 | + |
5CDS-intron | ENST00000373626 | ENST00000498639 | RPS4X | chrX | 71494903 | - | CPB1 | chr3 | 148562464 | + |
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FusionProtFeatures for RPS4X_CPB1 |
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Hgene | Tgene |
RPS4X | CPB1 |
![]() * Minus value of BPloci means that the break pointn is located before the CDS. |
- In-frame and retained protein feature among the 13 regional features. |
Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Protein feature | Protein feature note |
Hgene | RPS4X | chrX:71494903 | chr3:148562464 | ENST00000316084 | - | 4 | 7 | 42_104 | 120 | 264 | Domain | Note=S4 RNA-binding |
Tgene | >CPB1 | chrX:71494903 | chr3:148562464 | ENST00000282957 | + | 6 | 11 | 251_252 | 229 | 418 | Region | Substrate binding |
Tgene | >CPB1 | chrX:71494903 | chr3:148562464 | ENST00000282957 | + | 6 | 11 | 305_306 | 229 | 418 | Region | Substrate binding |
Tgene | >CPB1 | chrX:71494903 | chr3:148562464 | ENST00000491148 | + | 7 | 12 | 251_252 | 229 | 418 | Region | Substrate binding |
Tgene | >CPB1 | chrX:71494903 | chr3:148562464 | ENST00000491148 | + | 7 | 12 | 305_306 | 229 | 418 | Region | Substrate binding |
- In-frame and not-retained protein feature among the 13 regional features. |
Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Protein feature | Protein feature note |
Tgene | CPB1 | chrX:71494903 | chr3:148562464 | ENST00000282957 | + | 6 | 11 | 176_179 | 229 | 418 | Region | Substrate binding |
Tgene | CPB1 | chrX:71494903 | chr3:148562464 | ENST00000491148 | + | 7 | 12 | 176_179 | 229 | 418 | Region | Substrate binding |
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FusionGeneSequence for RPS4X_CPB1 |
![]() (nt: nucleotides, aa: amino acids) |
* Fusion amino acid sequences. |
>In-frame_RPS4X_ENST00000316084_chrX_71494903_-_CPB1_ENST00000491148_chr3_148562464_+_309aa MARGPKKHLKRVAAPKHWMLDKLTGVFAPRPSTGPHKLRECLPLIIFLRNRLKYALTGDEVKKICMQRFIKIDGKVRTDITYPAGFMDVI SIDKTGENFRLIYDTKGRFAVHRITPEEAKSRFWRKTRSTHTGSSCIGTDPNRNFDAGWCEIGASRNPCDETYCGPAAESEKETKALADF IRNKLSSIKAYLTIHSYSQMMIYPYSYAYKLGENNAELNALAKATVKELASLHGTKYTYGPGATTIYPAAGGSDDWAYDQGIRYSFTFEL >In-frame_RPS4X_ENST00000316084_chrX_71494903_-_CPB1_ENST00000282957_chr3_148562464_+_309aa MARGPKKHLKRVAAPKHWMLDKLTGVFAPRPSTGPHKLRECLPLIIFLRNRLKYALTGDEVKKICMQRFIKIDGKVRTDITYPAGFMDVI SIDKTGENFRLIYDTKGRFAVHRITPEEAKSRFWRKTRSTHTGSSCIGTDPNRNFDAGWCEIGASRNPCDETYCGPAAESEKETKALADF IRNKLSSIKAYLTIHSYSQMMIYPYSYAYKLGENNAELNALAKATVKELASLHGTKYTYGPGATTIYPAAGGSDDWAYDQGIRYSFTFEL >In-frame_RPS4X_ENST00000373626_chrX_71494903_-_CPB1_ENST00000491148_chr3_148562464_+_309aa MARGPKKHLKRVAAPKHWMLDKLTGVFAPRPSTGPHKLRECLPLIIFLRNRLKYALTGDEVKKICMQRFIKIDGKVRTDITYPAGFMDVI SIDKTGENFRLIYDTKGRFAVHRITPEEAKSRFWRKTRSTHTGSSCIGTDPNRNFDAGWCEIGASRNPCDETYCGPAAESEKETKALADF IRNKLSSIKAYLTIHSYSQMMIYPYSYAYKLGENNAELNALAKATVKELASLHGTKYTYGPGATTIYPAAGGSDDWAYDQGIRYSFTFEL >In-frame_RPS4X_ENST00000373626_chrX_71494903_-_CPB1_ENST00000282957_chr3_148562464_+_309aa MARGPKKHLKRVAAPKHWMLDKLTGVFAPRPSTGPHKLRECLPLIIFLRNRLKYALTGDEVKKICMQRFIKIDGKVRTDITYPAGFMDVI SIDKTGENFRLIYDTKGRFAVHRITPEEAKSRFWRKTRSTHTGSSCIGTDPNRNFDAGWCEIGASRNPCDETYCGPAAESEKETKALADF IRNKLSSIKAYLTIHSYSQMMIYPYSYAYKLGENNAELNALAKATVKELASLHGTKYTYGPGATTIYPAAGGSDDWAYDQGIRYSFTFEL |
* Fusion transcript sequences (only coding sequence (CDS) region). |
>In-frame_RPS4X_ENST00000316084_chrX_71494903_-_CPB1_ENST00000491148_chr3_148562464_+_927nt ATGGCTCGTGGTCCCAAGAAGCATCTGAAGCGGGTGGCAGCTCCAAAGCATTGGATGCTGGATAAATTGACCGGTGTGTTTGCTCCTCGT CCATCCACCGGTCCCCACAAGTTGAGAGAGTGTCTCCCCCTCATCATTTTCCTGAGGAACAGACTTAAGTATGCCCTGACAGGAGATGAA GTAAAGAAGATTTGCATGCAGCGGTTCATTAAAATCGATGGCAAGGTCCGAACTGATATAACCTACCCTGCTGGATTCATGGATGTCATC AGCATTGACAAGACGGGAGAGAATTTCCGTCTGATCTATGACACCAAGGGTCGCTTTGCTGTACATCGTATTACACCTGAGGAGGCCAAG AGCCGATTTTGGAGAAAGACTCGCTCCACCCATACTGGATCTAGCTGCATTGGCACAGACCCCAACAGAAATTTTGATGCTGGTTGGTGT GAAATTGGAGCCTCTCGAAACCCCTGTGATGAAACTTACTGTGGACCTGCCGCAGAGTCTGAAAAGGAGACCAAGGCCCTGGCTGATTTC ATCCGCAACAAACTCTCTTCCATCAAGGCATATCTGACAATCCACTCGTACTCCCAAATGATGATCTACCCTTACTCATATGCTTACAAA CTCGGTGAGAACAATGCTGAGTTGAATGCCCTGGCTAAAGCTACTGTGAAAGAACTTGCCTCACTGCACGGCACCAAGTACACATATGGC CCGGGAGCTACAACAATCTATCCTGCTGCTGGGGGCTCTGACGACTGGGCTTATGACCAAGGAATCAGATATTCCTTCACCTTTGAACTT CGAGATACAGGCAGATATGGCTTTCTCCTTCCAGAATCCCAGATCCGGGCTACCTGCGAGGAGACCTTCCTGGCAATCAAGTATGTTGCC >In-frame_RPS4X_ENST00000316084_chrX_71494903_-_CPB1_ENST00000282957_chr3_148562464_+_927nt ATGGCTCGTGGTCCCAAGAAGCATCTGAAGCGGGTGGCAGCTCCAAAGCATTGGATGCTGGATAAATTGACCGGTGTGTTTGCTCCTCGT CCATCCACCGGTCCCCACAAGTTGAGAGAGTGTCTCCCCCTCATCATTTTCCTGAGGAACAGACTTAAGTATGCCCTGACAGGAGATGAA GTAAAGAAGATTTGCATGCAGCGGTTCATTAAAATCGATGGCAAGGTCCGAACTGATATAACCTACCCTGCTGGATTCATGGATGTCATC AGCATTGACAAGACGGGAGAGAATTTCCGTCTGATCTATGACACCAAGGGTCGCTTTGCTGTACATCGTATTACACCTGAGGAGGCCAAG AGCCGATTTTGGAGAAAGACTCGCTCCACCCATACTGGATCTAGCTGCATTGGCACAGACCCCAACAGAAATTTTGATGCTGGTTGGTGT GAAATTGGAGCCTCTCGAAACCCCTGTGATGAAACTTACTGTGGACCTGCCGCAGAGTCTGAAAAGGAGACCAAGGCCCTGGCTGATTTC ATCCGCAACAAACTCTCTTCCATCAAGGCATATCTGACAATCCACTCGTACTCCCAAATGATGATCTACCCTTACTCATATGCTTACAAA CTCGGTGAGAACAATGCTGAGTTGAATGCCCTGGCTAAAGCTACTGTGAAAGAACTTGCCTCACTGCACGGCACCAAGTACACATATGGC CCGGGAGCTACAACAATCTATCCTGCTGCTGGGGGCTCTGACGACTGGGCTTATGACCAAGGAATCAGATATTCCTTCACCTTTGAACTT CGAGATACAGGCAGATATGGCTTTCTCCTTCCAGAATCCCAGATCCGGGCTACCTGCGAGGAGACCTTCCTGGCAATCAAGTATGTTGCC >In-frame_RPS4X_ENST00000373626_chrX_71494903_-_CPB1_ENST00000491148_chr3_148562464_+_927nt ATGGCTCGTGGTCCCAAGAAGCATCTGAAGCGGGTGGCAGCTCCAAAGCATTGGATGCTGGATAAATTGACCGGTGTGTTTGCTCCTCGT CCATCCACCGGTCCCCACAAGTTGAGAGAGTGTCTCCCCCTCATCATTTTCCTGAGGAACAGACTTAAGTATGCCCTGACAGGAGATGAA GTAAAGAAGATTTGCATGCAGCGGTTCATTAAAATCGATGGCAAGGTCCGAACTGATATAACCTACCCTGCTGGATTCATGGATGTCATC AGCATTGACAAGACGGGAGAGAATTTCCGTCTGATCTATGACACCAAGGGTCGCTTTGCTGTACATCGTATTACACCTGAGGAGGCCAAG AGCCGATTTTGGAGAAAGACTCGCTCCACCCATACTGGATCTAGCTGCATTGGCACAGACCCCAACAGAAATTTTGATGCTGGTTGGTGT GAAATTGGAGCCTCTCGAAACCCCTGTGATGAAACTTACTGTGGACCTGCCGCAGAGTCTGAAAAGGAGACCAAGGCCCTGGCTGATTTC ATCCGCAACAAACTCTCTTCCATCAAGGCATATCTGACAATCCACTCGTACTCCCAAATGATGATCTACCCTTACTCATATGCTTACAAA CTCGGTGAGAACAATGCTGAGTTGAATGCCCTGGCTAAAGCTACTGTGAAAGAACTTGCCTCACTGCACGGCACCAAGTACACATATGGC CCGGGAGCTACAACAATCTATCCTGCTGCTGGGGGCTCTGACGACTGGGCTTATGACCAAGGAATCAGATATTCCTTCACCTTTGAACTT CGAGATACAGGCAGATATGGCTTTCTCCTTCCAGAATCCCAGATCCGGGCTACCTGCGAGGAGACCTTCCTGGCAATCAAGTATGTTGCC >In-frame_RPS4X_ENST00000373626_chrX_71494903_-_CPB1_ENST00000282957_chr3_148562464_+_927nt ATGGCTCGTGGTCCCAAGAAGCATCTGAAGCGGGTGGCAGCTCCAAAGCATTGGATGCTGGATAAATTGACCGGTGTGTTTGCTCCTCGT CCATCCACCGGTCCCCACAAGTTGAGAGAGTGTCTCCCCCTCATCATTTTCCTGAGGAACAGACTTAAGTATGCCCTGACAGGAGATGAA GTAAAGAAGATTTGCATGCAGCGGTTCATTAAAATCGATGGCAAGGTCCGAACTGATATAACCTACCCTGCTGGATTCATGGATGTCATC AGCATTGACAAGACGGGAGAGAATTTCCGTCTGATCTATGACACCAAGGGTCGCTTTGCTGTACATCGTATTACACCTGAGGAGGCCAAG AGCCGATTTTGGAGAAAGACTCGCTCCACCCATACTGGATCTAGCTGCATTGGCACAGACCCCAACAGAAATTTTGATGCTGGTTGGTGT GAAATTGGAGCCTCTCGAAACCCCTGTGATGAAACTTACTGTGGACCTGCCGCAGAGTCTGAAAAGGAGACCAAGGCCCTGGCTGATTTC ATCCGCAACAAACTCTCTTCCATCAAGGCATATCTGACAATCCACTCGTACTCCCAAATGATGATCTACCCTTACTCATATGCTTACAAA CTCGGTGAGAACAATGCTGAGTTGAATGCCCTGGCTAAAGCTACTGTGAAAGAACTTGCCTCACTGCACGGCACCAAGTACACATATGGC CCGGGAGCTACAACAATCTATCCTGCTGCTGGGGGCTCTGACGACTGGGCTTATGACCAAGGAATCAGATATTCCTTCACCTTTGAACTT CGAGATACAGGCAGATATGGCTTTCTCCTTCCAGAATCCCAGATCCGGGCTACCTGCGAGGAGACCTTCCTGGCAATCAAGTATGTTGCC |
* Fusion transcript sequences (Full-length transcript). |
>In-frame_RPS4X_ENST00000316084_chrX_71494903_-_CPB1_ENST00000491148_chr3_148562464_+_1217nt GGCTGAGCTGGGCGGAGCAGCTGAAAATCCGGCGCGCGCAGTCTCCAGCCCCAATTTCTACGCGCACCGGAAGACGGAGGTCCTCTTTCC TTGCCTAACGCAGCCATGGCTCGTGGTCCCAAGAAGCATCTGAAGCGGGTGGCAGCTCCAAAGCATTGGATGCTGGATAAATTGACCGGT GTGTTTGCTCCTCGTCCATCCACCGGTCCCCACAAGTTGAGAGAGTGTCTCCCCCTCATCATTTTCCTGAGGAACAGACTTAAGTATGCC CTGACAGGAGATGAAGTAAAGAAGATTTGCATGCAGCGGTTCATTAAAATCGATGGCAAGGTCCGAACTGATATAACCTACCCTGCTGGA TTCATGGATGTCATCAGCATTGACAAGACGGGAGAGAATTTCCGTCTGATCTATGACACCAAGGGTCGCTTTGCTGTACATCGTATTACA CCTGAGGAGGCCAAGAGCCGATTTTGGAGAAAGACTCGCTCCACCCATACTGGATCTAGCTGCATTGGCACAGACCCCAACAGAAATTTT GATGCTGGTTGGTGTGAAATTGGAGCCTCTCGAAACCCCTGTGATGAAACTTACTGTGGACCTGCCGCAGAGTCTGAAAAGGAGACCAAG GCCCTGGCTGATTTCATCCGCAACAAACTCTCTTCCATCAAGGCATATCTGACAATCCACTCGTACTCCCAAATGATGATCTACCCTTAC TCATATGCTTACAAACTCGGTGAGAACAATGCTGAGTTGAATGCCCTGGCTAAAGCTACTGTGAAAGAACTTGCCTCACTGCACGGCACC AAGTACACATATGGCCCGGGAGCTACAACAATCTATCCTGCTGCTGGGGGCTCTGACGACTGGGCTTATGACCAAGGAATCAGATATTCC TTCACCTTTGAACTTCGAGATACAGGCAGATATGGCTTTCTCCTTCCAGAATCCCAGATCCGGGCTACCTGCGAGGAGACCTTCCTGGCA ATCAAGTATGTTGCCAGCTACGTCCTGGAACACCTGTACTAGTTGAGAAAGCTGATGGCCTTGTTTCAAAATTCTCATTTTTCATTTCTT TTCTTTCTTGAATTCTTATTTTGGTTTGCCTGGATGTTTTGCAGATCCCAATCTTTCTTTTAAGCTTCTGGGTCTATTAAACTAGGTAGA >In-frame_RPS4X_ENST00000316084_chrX_71494903_-_CPB1_ENST00000282957_chr3_148562464_+_1213nt GGCTGAGCTGGGCGGAGCAGCTGAAAATCCGGCGCGCGCAGTCTCCAGCCCCAATTTCTACGCGCACCGGAAGACGGAGGTCCTCTTTCC TTGCCTAACGCAGCCATGGCTCGTGGTCCCAAGAAGCATCTGAAGCGGGTGGCAGCTCCAAAGCATTGGATGCTGGATAAATTGACCGGT GTGTTTGCTCCTCGTCCATCCACCGGTCCCCACAAGTTGAGAGAGTGTCTCCCCCTCATCATTTTCCTGAGGAACAGACTTAAGTATGCC CTGACAGGAGATGAAGTAAAGAAGATTTGCATGCAGCGGTTCATTAAAATCGATGGCAAGGTCCGAACTGATATAACCTACCCTGCTGGA TTCATGGATGTCATCAGCATTGACAAGACGGGAGAGAATTTCCGTCTGATCTATGACACCAAGGGTCGCTTTGCTGTACATCGTATTACA CCTGAGGAGGCCAAGAGCCGATTTTGGAGAAAGACTCGCTCCACCCATACTGGATCTAGCTGCATTGGCACAGACCCCAACAGAAATTTT GATGCTGGTTGGTGTGAAATTGGAGCCTCTCGAAACCCCTGTGATGAAACTTACTGTGGACCTGCCGCAGAGTCTGAAAAGGAGACCAAG GCCCTGGCTGATTTCATCCGCAACAAACTCTCTTCCATCAAGGCATATCTGACAATCCACTCGTACTCCCAAATGATGATCTACCCTTAC TCATATGCTTACAAACTCGGTGAGAACAATGCTGAGTTGAATGCCCTGGCTAAAGCTACTGTGAAAGAACTTGCCTCACTGCACGGCACC AAGTACACATATGGCCCGGGAGCTACAACAATCTATCCTGCTGCTGGGGGCTCTGACGACTGGGCTTATGACCAAGGAATCAGATATTCC TTCACCTTTGAACTTCGAGATACAGGCAGATATGGCTTTCTCCTTCCAGAATCCCAGATCCGGGCTACCTGCGAGGAGACCTTCCTGGCA ATCAAGTATGTTGCCAGCTACGTCCTGGAACACCTGTACTAGTTGAGAAAGCTGATGGCCTTGTTTCAAAATTCTCATTTTTCATTTCTT TTCTTTCTTGAATTCTTATTTTGGTTTGCCTGGATGTTTTGCAGATCCCAATCTTTCTTTTAAGCTTCTGGGTCTATTAAACTAGGTAGA >In-frame_RPS4X_ENST00000373626_chrX_71494903_-_CPB1_ENST00000491148_chr3_148562464_+_1165nt AATTTCTACGCGCACCGGAAGACGGAGGTCCTCTTTCCTTGCCTAACGCAGCCATGGCTCGTGGTCCCAAGAAGCATCTGAAGCGGGTGG CAGCTCCAAAGCATTGGATGCTGGATAAATTGACCGGTGTGTTTGCTCCTCGTCCATCCACCGGTCCCCACAAGTTGAGAGAGTGTCTCC CCCTCATCATTTTCCTGAGGAACAGACTTAAGTATGCCCTGACAGGAGATGAAGTAAAGAAGATTTGCATGCAGCGGTTCATTAAAATCG ATGGCAAGGTCCGAACTGATATAACCTACCCTGCTGGATTCATGGATGTCATCAGCATTGACAAGACGGGAGAGAATTTCCGTCTGATCT ATGACACCAAGGGTCGCTTTGCTGTACATCGTATTACACCTGAGGAGGCCAAGAGCCGATTTTGGAGAAAGACTCGCTCCACCCATACTG GATCTAGCTGCATTGGCACAGACCCCAACAGAAATTTTGATGCTGGTTGGTGTGAAATTGGAGCCTCTCGAAACCCCTGTGATGAAACTT ACTGTGGACCTGCCGCAGAGTCTGAAAAGGAGACCAAGGCCCTGGCTGATTTCATCCGCAACAAACTCTCTTCCATCAAGGCATATCTGA CAATCCACTCGTACTCCCAAATGATGATCTACCCTTACTCATATGCTTACAAACTCGGTGAGAACAATGCTGAGTTGAATGCCCTGGCTA AAGCTACTGTGAAAGAACTTGCCTCACTGCACGGCACCAAGTACACATATGGCCCGGGAGCTACAACAATCTATCCTGCTGCTGGGGGCT CTGACGACTGGGCTTATGACCAAGGAATCAGATATTCCTTCACCTTTGAACTTCGAGATACAGGCAGATATGGCTTTCTCCTTCCAGAAT CCCAGATCCGGGCTACCTGCGAGGAGACCTTCCTGGCAATCAAGTATGTTGCCAGCTACGTCCTGGAACACCTGTACTAGTTGAGAAAGC TGATGGCCTTGTTTCAAAATTCTCATTTTTCATTTCTTTTCTTTCTTGAATTCTTATTTTGGTTTGCCTGGATGTTTTGCAGATCCCAAT >In-frame_RPS4X_ENST00000373626_chrX_71494903_-_CPB1_ENST00000282957_chr3_148562464_+_1161nt AATTTCTACGCGCACCGGAAGACGGAGGTCCTCTTTCCTTGCCTAACGCAGCCATGGCTCGTGGTCCCAAGAAGCATCTGAAGCGGGTGG CAGCTCCAAAGCATTGGATGCTGGATAAATTGACCGGTGTGTTTGCTCCTCGTCCATCCACCGGTCCCCACAAGTTGAGAGAGTGTCTCC CCCTCATCATTTTCCTGAGGAACAGACTTAAGTATGCCCTGACAGGAGATGAAGTAAAGAAGATTTGCATGCAGCGGTTCATTAAAATCG ATGGCAAGGTCCGAACTGATATAACCTACCCTGCTGGATTCATGGATGTCATCAGCATTGACAAGACGGGAGAGAATTTCCGTCTGATCT ATGACACCAAGGGTCGCTTTGCTGTACATCGTATTACACCTGAGGAGGCCAAGAGCCGATTTTGGAGAAAGACTCGCTCCACCCATACTG GATCTAGCTGCATTGGCACAGACCCCAACAGAAATTTTGATGCTGGTTGGTGTGAAATTGGAGCCTCTCGAAACCCCTGTGATGAAACTT ACTGTGGACCTGCCGCAGAGTCTGAAAAGGAGACCAAGGCCCTGGCTGATTTCATCCGCAACAAACTCTCTTCCATCAAGGCATATCTGA CAATCCACTCGTACTCCCAAATGATGATCTACCCTTACTCATATGCTTACAAACTCGGTGAGAACAATGCTGAGTTGAATGCCCTGGCTA AAGCTACTGTGAAAGAACTTGCCTCACTGCACGGCACCAAGTACACATATGGCCCGGGAGCTACAACAATCTATCCTGCTGCTGGGGGCT CTGACGACTGGGCTTATGACCAAGGAATCAGATATTCCTTCACCTTTGAACTTCGAGATACAGGCAGATATGGCTTTCTCCTTCCAGAAT CCCAGATCCGGGCTACCTGCGAGGAGACCTTCCTGGCAATCAAGTATGTTGCCAGCTACGTCCTGGAACACCTGTACTAGTTGAGAAAGC TGATGGCCTTGTTTCAAAATTCTCATTTTTCATTTCTTTTCTTTCTTGAATTCTTATTTTGGTTTGCCTGGATGTTTTGCAGATCCCAAT |
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FusionGenePPI for RPS4X_CPB1 |
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Hgene | Hgene's interactors | Tgene | Tgene's interactors |
RPS4X | HNRNPH3, MCM2, ARPC3, MEPCE, RUVBL2, CDK9, ESR1, DCC, HDAC5, NOP56, RAD21, SENP3, ARRB2, SIRT7, CUL3, CUL4B, CUL5, CUL2, CDK2, CUL1, COPS5, COPS6, CAND1, NEDD8, RPS7, RPS8, RPS15, RPS16, RPS17, RPS19, RPS20, RPS5, RPS6, RPS9, RPS11, RPS12, RPS13, RPS18, RPS2, RPS3, RPS10, RPS21, RPS14, RPL5, RPL7, RPS3A, RPSA, RPLP0, RPL10A, RPL10, RPL11, RPL12, RPL13, RPL14, RPL15, RPL18A, RPL18, RPL19, RPL21, RPL23A, RPL24, RPL27A, RPL31, RPL37A, RPL3, RPL6, RPL7A, RPL8, RPL9, RPS15A, RPS23, RPS24, RPS26, RPS28, RPS25, RPL4, RPL27, RPL30, RPL23, RPLP2, RPLP1, RPL22, RPL36, EEF2, RPL17, RPL32, RPS27A, EEF1A1, SLC25A5, FBL, NOP58, ILF2, SRP14, NPM1, GNL3, NCL, ILF3, HNRNPU, PABPC1, EIF3C, NOLC1, NHP2L1, EIF6, HNRNPM, LUC7L2, U2AF1, ACTA2, NAP1L1, TSR1, GAR1, HSPA8, RPL10L, RPLP0P6, HIST1H2AD, RPS27L, NOP2, PTRF, CDC5L, RRS1, HIST1H2AA, RPS10P5, SMURF1, HSP90AB1, HSP90AA1, ESR2, FN1, VCAM1, NOS2, UBL4A, ITGA4, PHB, PAN2, CD81, IGSF8, ICAM1, CTBP2, CAMK2D, FBXO6, TARDBP, EIF3CL, LARP1, RPS27, RPS29, EIF3D, EIF3L, FAU, WIBG, ZBTB1, STAU1, AURKA, AURKB, CDKN1A, CEP250, CEP57, CEP76, LGALS3BP, NEDD1, TUBG1, TUBGCP3, VCP, TP53, HUWE1, CUL7, OBSL1, CCDC8, EED, MAGEA10, ZZEF1, HECTD3, RPS6KB2, RPL29, RPL35, RPL35A, BRIX1, BYSL, DDX18, DDX24, DKC1, EIF2S3, KRR1, NOL6, RPL13A, RPL26, RPL38, RPL39, LOC101929876, SLC25A1, TUBB2B, UBA52, XRN1, NTRK1, PTEN, XPO1, AHSA1, EXOSC4, EXOSC1, GAN, SKI, TRIM29, NF2, SSSCA1, GGPS1, CYLD, TRIM25, YAP1, MTF1 | CPB1 |
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Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Still interaction with |
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Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Interaction lost with |
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Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Interaction lost with |
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RelatedDrugs for RPS4X_CPB1 |
![]() (DrugBank Version 5.1.0 2018-04-02) |
Partner | Gene | UniProtAcc | DrugBank ID | Drug name | Drug activity | Drug type | Drug status |
Tgene | CPB1 | P15086 | DB04272 | Citric Acid | Carboxypeptidase B | small molecule | approved|nutraceutical|vet_approved |
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RelatedDiseases for RPS4X_CPB1 |
![]() (DisGeNet 4.0) |
Partner | Gene | Disease ID | Disease name | # pubmeds | Source |
Hgene | RPS4X | C1458155 | Mammary Neoplasms | 1 | CTD_human |