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Fusion gene ID: 31480 |
FusionGeneSummary for RNF170_SFRP1 |
Fusion gene summary |
Fusion gene information | Fusion gene name: RNF170_SFRP1 | Fusion gene ID: 31480 | Hgene | Tgene | Gene symbol | RNF170 | SFRP1 | Gene ID | 81790 | 6422 |
Gene name | ring finger protein 170 | secreted frizzled related protein 1 | |
Synonyms | ADSA|SNAX1 | FRP|FRP-1|FRP1|FrzA|SARP2 | |
Cytomap | 8p11.21 | 8p11.21 | |
Type of gene | protein-coding | protein-coding | |
Description | E3 ubiquitin-protein ligase RNF170RING-type E3 ubiquitin transferase RNF170putative LAG1-interacting protein | secreted frizzled-related protein 1SARP-2frizzled-related proteinsFRP-1secreted apoptosis-related protein 2 | |
Modification date | 20180519 | 20180523 | |
UniProtAcc | Q96K19 | Q8N474 | |
Ensembl transtripts involved in fusion gene | ENST00000319104, ENST00000319073, ENST00000534961, ENST00000527424, ENST00000526349, | ENST00000220772, ENST00000379845, | |
Fusion gene scores | * DoF score | 6 X 3 X 4=72 | 3 X 3 X 3=27 |
# samples | 6 | 3 | |
** MAII score | log2(6/72*10)=-0.263034405833794 possibly effective Gene in Pan-Cancer Fusion Genes (peGinPCFGs). DoF>8 and MAII<0 | log2(3/27*10)=0.15200309344505 effective Gene in Pan-Cancer Fusion Genes (eGinPCFGs). DoF>8 and MAII>0 | |
Context | PubMed: RNF170 [Title/Abstract] AND SFRP1 [Title/Abstract] AND fusion [Title/Abstract] | ||
Functional or gene categories assigned by FusionGDB annotation | Tumor suppressor gene involved fusion gene, in-frame but not retained their domain. Tumor suppressor gene involved fusion gene, retained protein feature but frameshift. DDR (DNA damage repair) gene involved fusion gene, in-frame but not retained their domain. |
* DoF score (Degree of Frequency) = # partners X # break points X # cancer types ** MAII score (Major Active Isofusion Index) = log2(# samples/DoF score*10) |
Gene ontology of each fusion partner gene with evidence of Inferred from Direct Assay (IDA) from Entrez |
Partner | Gene | GO ID | GO term | PubMed ID |
Tgene | SFRP1 | GO:0002244 | hematopoietic progenitor cell differentiation | 19778523 |
Tgene | SFRP1 | GO:0008284 | positive regulation of cell proliferation | 10980594 |
Tgene | SFRP1 | GO:0008285 | negative regulation of cell proliferation | 10347172|17443492|17994217|19277043|20208569 |
Tgene | SFRP1 | GO:0009950 | dorsal/ventral axis specification | 9192640 |
Tgene | SFRP1 | GO:0010629 | negative regulation of gene expression | 10980594 |
Tgene | SFRP1 | GO:0010719 | negative regulation of epithelial to mesenchymal transition | 19095296 |
Tgene | SFRP1 | GO:0014070 | response to organic cyclic compound | 20208569 |
Tgene | SFRP1 | GO:0030177 | positive regulation of Wnt signaling pathway | 10660608 |
Tgene | SFRP1 | GO:0030178 | negative regulation of Wnt signaling pathway | 9192640|10660608|17500071|20208569 |
Tgene | SFRP1 | GO:0030279 | negative regulation of ossification | 15677765 |
Tgene | SFRP1 | GO:0030307 | positive regulation of cell growth | 10980594|16288033 |
Tgene | SFRP1 | GO:0030308 | negative regulation of cell growth | 19569235|20208569 |
Tgene | SFRP1 | GO:0030336 | negative regulation of cell migration | 10980594 |
Tgene | SFRP1 | GO:0042493 | response to drug | 19072540|19254787 |
Tgene | SFRP1 | GO:0043065 | positive regulation of apoptotic process | 9391078|15677765 |
Tgene | SFRP1 | GO:0044344 | cellular response to fibroblast growth factor stimulus | 17500071 |
Tgene | SFRP1 | GO:0045600 | positive regulation of fat cell differentiation | 12055200|15886250 |
Tgene | SFRP1 | GO:0045892 | negative regulation of transcription, DNA-templated | 10660608|19095296|19277043|20234818 |
Tgene | SFRP1 | GO:0045893 | positive regulation of transcription, DNA-templated | 10660608|15886250|19569235 |
Tgene | SFRP1 | GO:0046676 | negative regulation of insulin secretion | 17994217 |
Tgene | SFRP1 | GO:0048147 | negative regulation of fibroblast proliferation | 19734317 |
Tgene | SFRP1 | GO:0050680 | negative regulation of epithelial cell proliferation | 19095296 |
Tgene | SFRP1 | GO:0050732 | negative regulation of peptidyl-tyrosine phosphorylation | 10980594 |
Tgene | SFRP1 | GO:0060070 | canonical Wnt signaling pathway | 18787224 |
Tgene | SFRP1 | GO:0060218 | hematopoietic stem cell differentiation | 19778523 |
Tgene | SFRP1 | GO:0060766 | negative regulation of androgen receptor signaling pathway | 19277043 |
Tgene | SFRP1 | GO:0071356 | cellular response to tumor necrosis factor | 9391078 |
Tgene | SFRP1 | GO:0071363 | cellular response to growth factor stimulus | 17500071 |
Tgene | SFRP1 | GO:0071391 | cellular response to estrogen stimulus | 18941195 |
Tgene | SFRP1 | GO:0071504 | cellular response to heparin | 17500071 |
Tgene | SFRP1 | GO:0090090 | negative regulation of canonical Wnt signaling pathway | 9391078|10347172|16149051|16288033|17443492|17471511|19095296|19277043|19569235 |
Tgene | SFRP1 | GO:0090263 | positive regulation of canonical Wnt signaling pathway | 18941195 |
Tgene | SFRP1 | GO:1902043 | positive regulation of extrinsic apoptotic signaling pathway via death domain receptors | 9391078 |
Tgene | SFRP1 | GO:2000052 | positive regulation of non-canonical Wnt signaling pathway | 19569235 |
Tgene | SFRP1 | GO:2000054 | negative regulation of Wnt signaling pathway involved in dorsal/ventral axis specification | 9192640 |
Tgene | SFRP1 | GO:2000080 | negative regulation of canonical Wnt signaling pathway involved in controlling type B pancreatic cell proliferation | 17994217 |
Tgene | SFRP1 | GO:2000270 | negative regulation of fibroblast apoptotic process | 14581477 |
Tgene | SFRP1 | GO:2000271 | positive regulation of fibroblast apoptotic process | 14581477 |
Fusion gene information from three resources (ChiTars (NAR, 2018), tumorfusions (NAR, 2018), Gao et al. (Cell, 2018)) * All genome coordinats were lifted-over on hg19. * Click on the break point to see the gene structure around the break point region using the UCSC Genome Browser. |
Data type | Source | Cancer type | Sample | Hgene | Hchr | Hbp | Hstrand | Tgene | Tchr | Tbp | Tstrand |
TCGA | RV | LUAD | TCGA-50-6673-01A | RNF170 | chr8 | 42742871 | - | SFRP1 | chr8 | 41123008 | - |
* LD: Li Ding group's fusion gene list RV: Roel Verhaak group's fusion gene list ChiTaRs fusion database |
Open reading frame (ORF) analsis of fusion genes based on Ensembl gene isoform structure. * Click on the break point to see the gene structure around the break point region using the UCSC Genome Browser. |
ORF | Henst | Tenst | Hgene | Hchr | Hbp | Hstrand | Tgene | Tchr | Tbp | Tstrand |
In-frame | ENST00000319104 | ENST00000220772 | RNF170 | chr8 | 42742871 | - | SFRP1 | chr8 | 41123008 | - |
Frame-shift | ENST00000319104 | ENST00000379845 | RNF170 | chr8 | 42742871 | - | SFRP1 | chr8 | 41123008 | - |
5UTR-3CDS | ENST00000319073 | ENST00000220772 | RNF170 | chr8 | 42742871 | - | SFRP1 | chr8 | 41123008 | - |
5UTR-3CDS | ENST00000319073 | ENST00000379845 | RNF170 | chr8 | 42742871 | - | SFRP1 | chr8 | 41123008 | - |
Frame-shift | ENST00000534961 | ENST00000220772 | RNF170 | chr8 | 42742871 | - | SFRP1 | chr8 | 41123008 | - |
In-frame | ENST00000534961 | ENST00000379845 | RNF170 | chr8 | 42742871 | - | SFRP1 | chr8 | 41123008 | - |
In-frame | ENST00000527424 | ENST00000220772 | RNF170 | chr8 | 42742871 | - | SFRP1 | chr8 | 41123008 | - |
Frame-shift | ENST00000527424 | ENST00000379845 | RNF170 | chr8 | 42742871 | - | SFRP1 | chr8 | 41123008 | - |
intron-3CDS | ENST00000526349 | ENST00000220772 | RNF170 | chr8 | 42742871 | - | SFRP1 | chr8 | 41123008 | - |
intron-3CDS | ENST00000526349 | ENST00000379845 | RNF170 | chr8 | 42742871 | - | SFRP1 | chr8 | 41123008 | - |
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FusionProtFeatures for RNF170_SFRP1 |
Main function of each fusion partner protein. (from UniProt) |
Hgene | Tgene |
RNF170 | SFRP1 |
Soluble frizzled-related proteins (sFRPS) function asmodulators of Wnt signaling through direct interaction with Wnts.They have a role in regulating cell growth and differentiation inspecific cell types. SFRP1 decreases intracellular beta-cateninlevels (By similarity). Has antiproliferative effects on vascularcells, in vitro and in vivo, and can induce, in vivo, anangiogenic response. In vascular cell cycle, delays the G1 phaseand entry into the S phase (By similarity). In kidney development,inhibits tubule formation and bud growth in metanephroi (Bysimilarity). Inhibits WNT1/WNT4-mediated TCF-dependenttranscription. {ECO:0000250}. |
Retention analysis result of each fusion partner protein across 39 protein features of UniProt such as six molecule processing features, 13 region features, four site features, six amino acid modification features, two natural variation features, five experimental info features, and 3 secondary structure features. Here, because of limited space for viewing, we only show the protein feature retention information belong to the 13 regional features. All retention annotation result can be downloaded at . * Minus value of BPloci means that the break pointn is located before the CDS. |
- In-frame and retained protein feature among the 13 regional features. |
Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Protein feature | Protein feature note |
Hgene | RNF170 | chr8:42742871 | chr8:41123008 | ENST00000319104 | - | 2 | 6 | 1_24 | 45 | 201 | Topological domain | Lumenal |
Hgene | RNF170 | chr8:42742871 | chr8:41123008 | ENST00000527424 | - | 2 | 7 | 1_24 | 45 | 259 | Topological domain | Lumenal |
Hgene | RNF170 | chr8:42742871 | chr8:41123008 | ENST00000534961 | - | 2 | 7 | 1_24 | 45 | 259 | Topological domain | Lumenal |
Hgene | RNF170 | chr8:42742871 | chr8:41123008 | ENST00000319104 | - | 2 | 6 | 25_45 | 45 | 201 | Transmembrane | Helical |
Hgene | RNF170 | chr8:42742871 | chr8:41123008 | ENST00000527424 | - | 2 | 7 | 25_45 | 45 | 259 | Transmembrane | Helical |
Hgene | RNF170 | chr8:42742871 | chr8:41123008 | ENST00000534961 | - | 2 | 7 | 25_45 | 45 | 259 | Transmembrane | Helical |
- In-frame and not-retained protein feature among the 13 regional features. |
Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Protein feature | Protein feature note |
Hgene | >RNF170 | chr8:42742871 | chr8:41123008 | ENST00000319073 | - | 2 | 6 | 1_24 | -26 | 163 | Topological domain | Lumenal |
Hgene | >RNF170 | chr8:42742871 | chr8:41123008 | ENST00000319073 | - | 2 | 6 | 223_223 | -26 | 163 | Topological domain | Lumenal |
Hgene | >RNF170 | chr8:42742871 | chr8:41123008 | ENST00000319073 | - | 2 | 6 | 245_258 | -26 | 163 | Topological domain | Cytoplasmic |
Hgene | >RNF170 | chr8:42742871 | chr8:41123008 | ENST00000319073 | - | 2 | 6 | 46_201 | -26 | 163 | Topological domain | Cytoplasmic |
Hgene | >RNF170 | chr8:42742871 | chr8:41123008 | ENST00000319104 | - | 2 | 6 | 223_223 | 45 | 201 | Topological domain | Lumenal |
Hgene | >RNF170 | chr8:42742871 | chr8:41123008 | ENST00000319104 | - | 2 | 6 | 245_258 | 45 | 201 | Topological domain | Cytoplasmic |
Hgene | >RNF170 | chr8:42742871 | chr8:41123008 | ENST00000319104 | - | 2 | 6 | 46_201 | 45 | 201 | Topological domain | Cytoplasmic |
Hgene | >RNF170 | chr8:42742871 | chr8:41123008 | ENST00000526349 | - | 1 | 7 | 1_24 | -121 | 175 | Topological domain | Lumenal |
Hgene | >RNF170 | chr8:42742871 | chr8:41123008 | ENST00000526349 | - | 1 | 7 | 223_223 | -121 | 175 | Topological domain | Lumenal |
Hgene | >RNF170 | chr8:42742871 | chr8:41123008 | ENST00000526349 | - | 1 | 7 | 245_258 | -121 | 175 | Topological domain | Cytoplasmic |
Hgene | >RNF170 | chr8:42742871 | chr8:41123008 | ENST00000526349 | - | 1 | 7 | 46_201 | -121 | 175 | Topological domain | Cytoplasmic |
Hgene | >RNF170 | chr8:42742871 | chr8:41123008 | ENST00000527424 | - | 2 | 7 | 223_223 | 45 | 259 | Topological domain | Lumenal |
Hgene | >RNF170 | chr8:42742871 | chr8:41123008 | ENST00000527424 | - | 2 | 7 | 245_258 | 45 | 259 | Topological domain | Cytoplasmic |
Hgene | >RNF170 | chr8:42742871 | chr8:41123008 | ENST00000527424 | - | 2 | 7 | 46_201 | 45 | 259 | Topological domain | Cytoplasmic |
Hgene | >RNF170 | chr8:42742871 | chr8:41123008 | ENST00000534961 | - | 2 | 7 | 223_223 | 45 | 259 | Topological domain | Lumenal |
Hgene | >RNF170 | chr8:42742871 | chr8:41123008 | ENST00000534961 | - | 2 | 7 | 245_258 | 45 | 259 | Topological domain | Cytoplasmic |
Hgene | >RNF170 | chr8:42742871 | chr8:41123008 | ENST00000534961 | - | 2 | 7 | 46_201 | 45 | 259 | Topological domain | Cytoplasmic |
Hgene | >RNF170 | chr8:42742871 | chr8:41123008 | ENST00000319073 | - | 2 | 6 | 202_222 | -26 | 163 | Transmembrane | Helical |
Hgene | >RNF170 | chr8:42742871 | chr8:41123008 | ENST00000319073 | - | 2 | 6 | 224_244 | -26 | 163 | Transmembrane | Helical |
Hgene | >RNF170 | chr8:42742871 | chr8:41123008 | ENST00000319073 | - | 2 | 6 | 25_45 | -26 | 163 | Transmembrane | Helical |
Hgene | >RNF170 | chr8:42742871 | chr8:41123008 | ENST00000319104 | - | 2 | 6 | 202_222 | 45 | 201 | Transmembrane | Helical |
Hgene | >RNF170 | chr8:42742871 | chr8:41123008 | ENST00000319104 | - | 2 | 6 | 224_244 | 45 | 201 | Transmembrane | Helical |
Hgene | >RNF170 | chr8:42742871 | chr8:41123008 | ENST00000526349 | - | 1 | 7 | 202_222 | -121 | 175 | Transmembrane | Helical |
Hgene | >RNF170 | chr8:42742871 | chr8:41123008 | ENST00000526349 | - | 1 | 7 | 224_244 | -121 | 175 | Transmembrane | Helical |
Hgene | >RNF170 | chr8:42742871 | chr8:41123008 | ENST00000526349 | - | 1 | 7 | 25_45 | -121 | 175 | Transmembrane | Helical |
Hgene | >RNF170 | chr8:42742871 | chr8:41123008 | ENST00000527424 | - | 2 | 7 | 202_222 | 45 | 259 | Transmembrane | Helical |
Hgene | >RNF170 | chr8:42742871 | chr8:41123008 | ENST00000527424 | - | 2 | 7 | 224_244 | 45 | 259 | Transmembrane | Helical |
Hgene | >RNF170 | chr8:42742871 | chr8:41123008 | ENST00000534961 | - | 2 | 7 | 202_222 | 45 | 259 | Transmembrane | Helical |
Hgene | >RNF170 | chr8:42742871 | chr8:41123008 | ENST00000534961 | - | 2 | 7 | 224_244 | 45 | 259 | Transmembrane | Helical |
Hgene | >RNF170 | chr8:42742871 | chr8:41123008 | ENST00000319073 | - | 2 | 6 | 87_130 | -26 | 163 | Zinc finger | RING-type |
Hgene | >RNF170 | chr8:42742871 | chr8:41123008 | ENST00000319104 | - | 2 | 6 | 87_130 | 45 | 201 | Zinc finger | RING-type |
Hgene | >RNF170 | chr8:42742871 | chr8:41123008 | ENST00000526349 | - | 1 | 7 | 87_130 | -121 | 175 | Zinc finger | RING-type |
Hgene | >RNF170 | chr8:42742871 | chr8:41123008 | ENST00000527424 | - | 2 | 7 | 87_130 | 45 | 259 | Zinc finger | RING-type |
Hgene | >RNF170 | chr8:42742871 | chr8:41123008 | ENST00000534961 | - | 2 | 7 | 87_130 | 45 | 259 | Zinc finger | RING-type |
Tgene | SFRP1 | chr8:42742871 | chr8:41123008 | ENST00000220772 | - | 1 | 3 | 186_306 | 207 | 315 | Domain | NTR |
Tgene | SFRP1 | chr8:42742871 | chr8:41123008 | ENST00000220772 | - | 1 | 3 | 53_169 | 207 | 315 | Domain | FZ |
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FusionGeneSequence for RNF170_SFRP1 |
For in-frame fusion transcripts, we provide the fusion transcript sequences and fusion amino acid sequences. (nt: nucleotides, aa: amino acids) |
* Fusion amino acid sequences. |
>In-frame_RNF170_ENST00000319104_chr8_42742871_-_SFRP1_ENST00000220772_chr8_41123008_-_153aa MAKYQGEVQSLKLDDDSVIEGVSDQVLVAVVVSFALIATLVYALFSTEDENKRSEKRKWRQEDCPQEEEAPEVGAHQEEGPEEACAVPEE >In-frame_RNF170_ENST00000534961_chr8_42742871_-_SFRP1_ENST00000379845_chr8_41123008_-_153aa MAKYQGEVQSLKLDDDSVIEGVSDQVLVAVVVSFALIATLVYALFSTEDENKRSEKRKWRQEDCPQEEEAPEVGAHQEEGPEEACAVPEE >In-frame_RNF170_ENST00000527424_chr8_42742871_-_SFRP1_ENST00000220772_chr8_41123008_-_153aa MAKYQGEVQSLKLDDDSVIEGVSDQVLVAVVVSFALIATLVYALFSTEDENKRSEKRKWRQEDCPQEEEAPEVGAHQEEGPEEACAVPEE |
* Fusion transcript sequences (only coding sequence (CDS) region). |
>In-frame_RNF170_ENST00000319104_chr8_42742871_-_SFRP1_ENST00000220772_chr8_41123008_-_460nt ATGGCCAAATATCAAGGTGAAGTTCAAAGTTTGAAACTGGATGATGATTCAGTTATAGAAGGAGTAAGCGACCAAGTACTTGTGGCAGTT GTGGTCAGTTTCGCTTTGATTGCTACCCTGGTATATGCACTTTTCAGCACTGAGGATGAAAATAAAAGAAGTGAAAAAAGAAAATGGCGA CAAGAAGATTGTCCCCAAGAAGAAGAAGCCCCTGAAGTTGGGGCCCATCAAGAAGAAGGACCTGAAGAAGCTTGTGCTGTACCTGAAGAA TGGGGCTGACTGTCCCTGCCACCAGCTGGACAACCTCAGCCACCACTTCCTCATCATGGGCCGCAAGGTGAAGAGCCAGTACTTGCTGAC GGCCATCCACAAGTGGGACAAGAAAAACAAGGAGTTCAAAAACTTCATGAAGAAAATGAAAAACCATGAGTGCCCCACCTTTCAGTCCGT >In-frame_RNF170_ENST00000534961_chr8_42742871_-_SFRP1_ENST00000379845_chr8_41123008_-_460nt ATGGCCAAATATCAAGGTGAAGTTCAAAGTTTGAAACTGGATGATGATTCAGTTATAGAAGGAGTAAGCGACCAAGTACTTGTGGCAGTT GTGGTCAGTTTCGCTTTGATTGCTACCCTGGTATATGCACTTTTCAGCACTGAGGATGAAAATAAAAGAAGTGAAAAAAGAAAATGGCGA CAAGAAGATTGTCCCCAAGAAGAAGAAGCCCCTGAAGTTGGGGCCCATCAAGAAGAAGGACCTGAAGAAGCTTGTGCTGTACCTGAAGAA TGGGGCTGACTGTCCCTGCCACCAGCTGGACAACCTCAGCCACCACTTCCTCATCATGGGCCGCAAGGTGAAGAGCCAGTACTTGCTGAC GGCCATCCACAAGTGGGACAAGAAAAACAAGGAGTTCAAAAACTTCATGAAGAAAATGAAAAACCATGAGTGCCCCACCTTTCAGTCCGT >In-frame_RNF170_ENST00000527424_chr8_42742871_-_SFRP1_ENST00000220772_chr8_41123008_-_460nt ATGGCCAAATATCAAGGTGAAGTTCAAAGTTTGAAACTGGATGATGATTCAGTTATAGAAGGAGTAAGCGACCAAGTACTTGTGGCAGTT GTGGTCAGTTTCGCTTTGATTGCTACCCTGGTATATGCACTTTTCAGCACTGAGGATGAAAATAAAAGAAGTGAAAAAAGAAAATGGCGA CAAGAAGATTGTCCCCAAGAAGAAGAAGCCCCTGAAGTTGGGGCCCATCAAGAAGAAGGACCTGAAGAAGCTTGTGCTGTACCTGAAGAA TGGGGCTGACTGTCCCTGCCACCAGCTGGACAACCTCAGCCACCACTTCCTCATCATGGGCCGCAAGGTGAAGAGCCAGTACTTGCTGAC GGCCATCCACAAGTGGGACAAGAAAAACAAGGAGTTCAAAAACTTCATGAAGAAAATGAAAAACCATGAGTGCCCCACCTTTCAGTCCGT |
* Fusion transcript sequences (Full-length transcript). |
>In-frame_RNF170_ENST00000319104_chr8_42742871_-_SFRP1_ENST00000220772_chr8_41123008_-_3774nt GACGTCTAGTGGGTTGCCCGGGAGGGGTGGCGGGAGCGGTCCTGGAAATAATCTGTCCTCTGTCGCCGGGAACTGGCGAGGTAGTTCCTT CGCGGTGGAGAGACCTGGAATGGCCAAATATCAAGGTGAAGTTCAAAGTTTGAAACTGGATGATGATTCAGTTATAGAAGGAGTAAGCGA CCAAGTACTTGTGGCAGTTGTGGTCAGTTTCGCTTTGATTGCTACCCTGGTATATGCACTTTTCAGCACTGAGGATGAAAATAAAAGAAG TGAAAAAAGAAAATGGCGACAAGAAGATTGTCCCCAAGAAGAAGAAGCCCCTGAAGTTGGGGCCCATCAAGAAGAAGGACCTGAAGAAGC TTGTGCTGTACCTGAAGAATGGGGCTGACTGTCCCTGCCACCAGCTGGACAACCTCAGCCACCACTTCCTCATCATGGGCCGCAAGGTGA AGAGCCAGTACTTGCTGACGGCCATCCACAAGTGGGACAAGAAAAACAAGGAGTTCAAAAACTTCATGAAGAAAATGAAAAACCATGAGT GCCCCACCTTTCAGTCCGTGTTTAAGTGATTCTCCCGGGGGCAGGGTGGGGAGGGAGCCTCGGGTGGGGTGGGAGCGGGGGGGACAGTGC CCCGGGAACCCGGTGGGTCACACACACGCACTGCGCCTGTCAGTAGTGGACATTGTAATCCAGTCGGCTTGTTCTTGCAGCATTCCCGCT CCCTTCCCTCCATAGCCACGCTCCAAACCCCAGGGTAGCCATGGCCGGGTAAAGCAAGGGCCATTTAGATTAGGAAGGTTTTTAAGATCC GCAATGTGGAGCAGCAGCCACTGCACAGGAGGAGGTGACAAACCATTTCCAACAGCAACACAGCCACTAAAACACAAAAAGGGGGATTGG GCGGAAAGTGAGAGCCAGCAGCAAAAACTACATTTTGCAACTTGTTGGTGTGGATCTATTGGCTGATCTATGCCTTTCAACTAGAAAATT CTAATGATTGGCAAGTCACGTTGTTTTCAGGTCCAGAGTAGTTTCTTTCTGTCTGCTTTAAATGGAAACAGACTCATACCACACTTACAA TTAAGGTCAAGCCCAGAAAGTGATAAGTGCAGGGAGGAAAAGTGCAAGTCCATTATGTAATAGTGACAGCAAAGGGACCAGGGGAGAGGC ATTGCCTTCTCTGCCCACAGTCTTTCCGTGTGATTGTCTTTGAATCTGAATCAGCCAGTCTCAGATGCCCCAAAGTTTCGGTTCCTATGA GCCCGGGGCATGATCTGATCCCCAAGACATGTGGAGGGGCAGCCTGTGCCTGCCTTTGTGTCAGAAAAAGGAAACCACAGTGAGCCTGAG AGAGACGGCGATTTTCGGGCTGAGAAGGCAGTAGTTTTCAAAACACATAGTTAAAAAAGAAACAAATGAAAAAAATTTTAGAACAGTCCA GCAAATTGCTAGTCAGGGTGAATTGTGAAATTGGGTGAAGAGCTTAGGATTCTAATCTCATGTTTTTTCCTTTTCACATTTTTAAAAGAA CAATGACAAACACCCACTTATTTTTCAAGGTTTTAAAACAGTCTACATTGAGCATTTGAAAGGTGTGCTAGAACAAGGTCTCCTGATCCG TCCGAGGCTGCTTCCCAGAGGAGCAGCTCTCCCCAGGCATTTGCCAAGGGAGGCGGATTTCCCTGGTAGTGTAGCTGTGTGGCTTTCCTT CCTGAAGAGTCCGTGGTTGCCCTAGAACCTAACACCCCCTAGCAAAACTCACAGAGCTTTCCGTTTTTTTCTTTCCTGTAAAGAAACATT TCCTTTGAACTTGATTGCCTATGGATCAAAGAAATTCAGAACAGCCTGCCTGTCCCCCCGCACTTTTTACATATATTTGTTTCATTTCTG CAGATGGAAAGTTGACATGGGTGGGGTGTCCCCATCCAGCGAGAGAGTTTCAAAAGCAAAACATCTCTGCAGTTTTTCCCAAGTACCCTG AGATACTTCCCAAAGCCCTTATGTTTAATCAGCGATGTATATAAGCCAGTTCACTTAGACAACTTTACCCTTCTTGTCCAATGTACAGGA AGTAGTTCTAAAAAAAATGCATATTAATTTCTTCCCCCAAAGCCGGATTCTTAATTCTCTGCAACACTTTGAGGACATTTATGATTGTCC CTCTGGGCCAATGCTTATACCCAGTGAGGATGCTGCAGTGAGGCTGTAAAGTGGCCCCCTGCGGCCCTAGCCTGACCCGGAGGAAAGGAT GGTAGATTCTGTTAACTCTTGAAGACTCCAGTATGAAAATCAGCATGCCCGCCTAGTTACCTACCGGAGAGTTATCCTGATAAATTAACC TCTCACAGTTAGTGATCCTGTCCTTTTAACACCTTTTTTGTGGGGTTCTCTCTGACCTTTCATCGTAAAGTGCTGGGGACCTTAAGTGAT TTGCCTGTAATTTTGGATGATTAAAAAATGTGTATATATATTAGCTAATTAGAAATATTCTACTTCTCTGTTGTCAAACTGAAATTCAGA GCAAGTTCCTGAGTGCGTGGATCTGGGTCTTAGTTCTGGTTGATTCACTCAAGAGTTCAGTGCTCATACGTATCTGCTCATTTTGACAAA GTGCCTCATGCAACCGGGCCCTCTCTCTGCGGCAGAGTCCTTAGTGGAGGGGTTTACCTGGAACATTAGTAGTTACCACAGAATACGGAA GAGCAGGTGACTGTGCTGTGCAGCTCTCTAAATGGGAATTCTCAGGTAGGAAGCAACAGCTTCAGAAAGAGCTCAAAATAAATTGGAAAT GTGAATCGCAGCTGTGGGTTTTACCACCGTCTGTCTCAGAGTCCCAGGACCTTGAGTGTCATTAGTTACTTTATTGAAGGTTTTAGACCC ATAGCAGCTTTGTCTCTGTCACATCAGCAATTTCAGAACCAAAAGGGAGGCTCTCTGTAGGCACAGAGCTGCACTATCACGAGCCTTTGT TTTTCTCCACAAAGTATCTAACAAAACCAATGTGCAGACTGATTGGCCTGGTCATTGGTCTCCGAGAGAGGAGGTTTGCCTGTGATTTCC TAATTATCGCTAGGGCCAAGGTGGGATTTGTAAAGCTTTACAATAATCATTCTGGATAGAGTCCTGGGAGGTCCTTGGCAGAACTCAGTT AAATCTTTGAAGAATATTTGTAGTTATCTTAGAAGATAGCATGGGAGGTGAGGATTCCAAAAACATTTTATTTTTAAAATATCCTGTGTA ACACTTGGCTCTTGGTACCTGTGGGTTAGCATCAAGTTCTCCCCAGGGTAGAATTCAATCAGAGCTCCAGTTTGCATTTGGATGTGTAAA TTACAGTAATCCCATTTCCCAAACCTAAAATCTGTTTTTCTCATCAGACTCTGAGTAACTGGTTGCTGTGTCATAACTTCATAGATGCAG GAGGCTCAGGTGATCTGTTTGAGGAGAGCACCCTAGGCAGCCTGCAGGGAATAACATACTGGCCGTTCTGACCTGTTGCCAGCAGATACA CAGGACATGGATGAAATTCCCGTTTCCTCTAGTTTCTTCCTGTAGTACTCCTCTTTTAGATCCTAAGTCTCTTACAAAAGCTTTGAATAC TGTGAAAATGTTTTACATTCCATTTCATTTGTGTTGTTTTTTTAACTGCATTTTACCAGATGTTTTGATGTTATCGCTTATGTTAATAGT >In-frame_RNF170_ENST00000534961_chr8_42742871_-_SFRP1_ENST00000379845_chr8_41123008_-_4140nt AGTTCGCTGCGTGTCGAGGCGAGCACGCGCTCCGCCCTGGAGGCTGCGGCGACGGGTCCTCCTCCGCCGTCCGGTCGCGCCCTCGCGGAA GCTCGGCAGTGCGCGTGCGCCCGCACCCGCACTCCAAATTAGAAAGGGGACGTCTAGTGGGTTGCCCGGGAGGGGTGGCGGGAGCGGTCC TGGAAATAATCTGTCCTCTGTCGCCGGGAACTGGCGAGGTAGTTCCTTCGCGGTGGAGAGGTACGTCCGGCGCGCGGCGGCCACGCCCAC CCTATCGGGGCCCGCGGAGCCGCGGACGGCGGGGTCTGGCCTTCTTGGGGTAGCTCTGGCCGCCGAGGCTCTGCGGGGCGGCGGGAGTCG CCGCCTCCTTCCCCCCGGGCCCCTCCCTCGTCTGGAAGCCCCAGAATCGCCCCGCGGCTGTCCGGAGTCGCCGGCGACGGTGGAGGGGCC GACGCGGAGAGCGGCTCTAGACCTGGAATGGCCAAATATCAAGGTGAAGTTCAAAGTTTGAAACTGGATGATGATTCAGTTATAGAAGGA GTAAGCGACCAAGTACTTGTGGCAGTTGTGGTCAGTTTCGCTTTGATTGCTACCCTGGTATATGCACTTTTCAGCACTGAGGATGAAAAT AAAAGAAGTGAAAAAAGAAAATGGCGACAAGAAGATTGTCCCCAAGAAGAAGAAGCCCCTGAAGTTGGGGCCCATCAAGAAGAAGGACCT GAAGAAGCTTGTGCTGTACCTGAAGAATGGGGCTGACTGTCCCTGCCACCAGCTGGACAACCTCAGCCACCACTTCCTCATCATGGGCCG CAAGGTGAAGAGCCAGTACTTGCTGACGGCCATCCACAAGTGGGACAAGAAAAACAAGGAGTTCAAAAACTTCATGAAGAAAATGAAAAA CCATGAGTGCCCCACCTTTCAGTCCGTGTTTAAGTGATTCTCCCGGGGGCAGGGTGGGGAGGGAGCCTCGGGTGGGGTGGGAGCGGGGGG GACAGTGCCCCGGGAACCCGGTGGGTCACACACACGCACTGCGCCTGTCAGTAGTGGACATTGTAATCCAGTCGGCTTGTTCTTGCAGCA TTCCCGCTCCCTTCCCTCCATAGCCACGCTCCAAACCCCAGGGTAGCCATGGCCGGGTAAAGCAAGGGCCATTTAGATTAGGAAGGTTTT TAAGATCCGCAATGTGGAGCAGCAGCCACTGCACAGGAGGAGGTGACAAACCATTTCCAACAGCAACACAGCCACTAAAACACAAAAAGG GGGATTGGGCGGAAAGTGAGAGCCAGCAGCAAAAACTACATTTTGCAACTTGTTGGTGTGGATCTATTGGCTGATCTATGCCTTTCAACT AGAAAATTCTAATGATTGGCAAGTCACGTTGTTTTCAGGTCCAGAGTAGTTTCTTTCTGTCTGCTTTAAATGGAAACAGACTCATACCAC ACTTACAATTAAGGTCAAGCCCAGAAAGTGATAAGTGCAGGGAGGAAAAGTGCAAGTCCATTATGTAATAGTGACAGCAAAGGGACCAGG GGAGAGGCATTGCCTTCTCTGCCCACAGTCTTTCCGTGTGATTGTCTTTGAATCTGAATCAGCCAGTCTCAGATGCCCCAAAGTTTCGGT TCCTATGAGCCCGGGGCATGATCTGATCCCCAAGACATGTGGAGGGGCAGCCTGTGCCTGCCTTTGTGTCAGAAAAAGGAAACCACAGTG AGCCTGAGAGAGACGGCGATTTTCGGGCTGAGAAGGCAGTAGTTTTCAAAACACATAGTTAAAAAAGAAACAAATGAAAAAAATTTTAGA ACAGTCCAGCAAATTGCTAGTCAGGGTGAATTGTGAAATTGGGTGAAGAGCTTAGGATTCTAATCTCATGTTTTTTCCTTTTCACATTTT TAAAAGAACAATGACAAACACCCACTTATTTTTCAAGGTTTTAAAACAGTCTACATTGAGCATTTGAAAGGTGTGCTAGAACAAGGTCTC CTGATCCGTCCGAGGCTGCTTCCCAGAGGAGCAGCTCTCCCCAGGCATTTGCCAAGGGAGGCGGATTTCCCTGGTAGTGTAGCTGTGTGG CTTTCCTTCCTGAAGAGTCCGTGGTTGCCCTAGAACCTAACACCCCCTAGCAAAACTCACAGAGCTTTCCGTTTTTTTCTTTCCTGTAAA GAAACATTTCCTTTGAACTTGATTGCCTATGGATCAAAGAAATTCAGAACAGCCTGCCTGTCCCCCCGCACTTTTTACATATATTTGTTT CATTTCTGCAGATGGAAAGTTGACATGGGTGGGGTGTCCCCATCCAGCGAGAGAGTTTCAAAAGCAAAACATCTCTGCAGTTTTTCCCAA GTACCCTGAGATACTTCCCAAAGCCCTTATGTTTAATCAGCGATGTATATAAGCCAGTTCACTTAGACAACTTTACCCTTCTTGTCCAAT GTACAGGAAGTAGTTCTAAAAAAAATGCATATTAATTTCTTCCCCCAAAGCCGGATTCTTAATTCTCTGCAACACTTTGAGGACATTTAT GATTGTCCCTCTGGGCCAATGCTTATACCCAGTGAGGATGCTGCAGTGAGGCTGTAAAGTGGCCCCCTGCGGCCCTAGCCTGACCCGGAG GAAAGGATGGTAGATTCTGTTAACTCTTGAAGACTCCAGTATGAAAATCAGCATGCCCGCCTAGTTACCTACCGGAGAGTTATCCTGATA AATTAACCTCTCACAGTTAGTGATCCTGTCCTTTTAACACCTTTTTTGTGGGGTTCTCTCTGACCTTTCATCGTAAAGTGCTGGGGACCT TAAGTGATTTGCCTGTAATTTTGGATGATTAAAAAATGTGTATATATATTAGCTAATTAGAAATATTCTACTTCTCTGTTGTCAAACTGA AATTCAGAGCAAGTTCCTGAGTGCGTGGATCTGGGTCTTAGTTCTGGTTGATTCACTCAAGAGTTCAGTGCTCATACGTATCTGCTCATT TTGACAAAGTGCCTCATGCAACCGGGCCCTCTCTCTGCGGCAGAGTCCTTAGTGGAGGGGTTTACCTGGAACATTAGTAGTTACCACAGA ATACGGAAGAGCAGGTGACTGTGCTGTGCAGCTCTCTAAATGGGAATTCTCAGGTAGGAAGCAACAGCTTCAGAAAGAGCTCAAAATAAA TTGGAAATGTGAATCGCAGCTGTGGGTTTTACCACCGTCTGTCTCAGAGTCCCAGGACCTTGAGTGTCATTAGTTACTTTATTGAAGGTT TTAGACCCATAGCAGCTTTGTCTCTGTCACATCAGCAATTTCAGAACCAAAAGGGAGGCTCTCTGTAGGCACAGAGCTGCACTATCACGA GCCTTTGTTTTTCTCCACAAAGTATCTAACAAAACCAATGTGCAGACTGATTGGCCTGGTCATTGGTCTCCGAGAGAGGAGGTTTGCCTG TGATTTCCTAATTATCGCTAGGGCCAAGGTGGGATTTGTAAAGCTTTACAATAATCATTCTGGATAGAGTCCTGGGAGGTCCTTGGCAGA ACTCAGTTAAATCTTTGAAGAATATTTGTAGTTATCTTAGAAGATAGCATGGGAGGTGAGGATTCCAAAAACATTTTATTTTTAAAATAT CCTGTGTAACACTTGGCTCTTGGTACCTGTGGGTTAGCATCAAGTTCTCCCCAGGGTAGAATTCAATCAGAGCTCCAGTTTGCATTTGGA TGTGTAAATTACAGTAATCCCATTTCCCAAACCTAAAATCTGTTTTTCTCATCAGACTCTGAGTAACTGGTTGCTGTGTCATAACTTCAT AGATGCAGGAGGCTCAGGTGATCTGTTTGAGGAGAGCACCCTAGGCAGCCTGCAGGGAATAACATACTGGCCGTTCTGACCTGTTGCCAG CAGATACACAGGACATGGATGAAATTCCCGTTTCCTCTAGTTTCTTCCTGTAGTACTCCTCTTTTAGATCCTAAGTCTCTTACAAAAGCT TTGAATACTGTGAAAATGTTTTACATTCCATTTCATTTGTGTTGTTTTTTTAACTGCATTTTACCAGATGTTTTGATGTTATCGCTTATG TTAATAGTAATTCCCGTACGTGTTCATTTTATTTTCATGCTTTTTCAGCCATGTATCAATATTCACTTGACTAAAATCACTCAATTAATC >In-frame_RNF170_ENST00000527424_chr8_42742871_-_SFRP1_ENST00000220772_chr8_41123008_-_3910nt TTCGCTGCGTGTCGAGGCGAGCACGCGCTCCGCCCTGGAGGCTGCGGCGACGGGTCCTCCTCCGCCGTCCGGTCGCGCCCTCGCGGAAGC TCGGCAGTGCGCGTGCGCCCGCACCCGCACTCCAAATTAGAAAGGGGACGTCTAGTGGGTTGCCCGGGAGGGGTGGCGGGAGCGGTCCTG GAAATAATCTGTCCTCTGTCGCCGGGAACTGGCGAGGTAGTTCCTTCGCGGTGGAGAGACCTGGAATGGCCAAATATCAAGGTGAAGTTC AAAGTTTGAAACTGGATGATGATTCAGTTATAGAAGGAGTAAGCGACCAAGTACTTGTGGCAGTTGTGGTCAGTTTCGCTTTGATTGCTA CCCTGGTATATGCACTTTTCAGCACTGAGGATGAAAATAAAAGAAGTGAAAAAAGAAAATGGCGACAAGAAGATTGTCCCCAAGAAGAAG AAGCCCCTGAAGTTGGGGCCCATCAAGAAGAAGGACCTGAAGAAGCTTGTGCTGTACCTGAAGAATGGGGCTGACTGTCCCTGCCACCAG CTGGACAACCTCAGCCACCACTTCCTCATCATGGGCCGCAAGGTGAAGAGCCAGTACTTGCTGACGGCCATCCACAAGTGGGACAAGAAA AACAAGGAGTTCAAAAACTTCATGAAGAAAATGAAAAACCATGAGTGCCCCACCTTTCAGTCCGTGTTTAAGTGATTCTCCCGGGGGCAG GGTGGGGAGGGAGCCTCGGGTGGGGTGGGAGCGGGGGGGACAGTGCCCCGGGAACCCGGTGGGTCACACACACGCACTGCGCCTGTCAGT AGTGGACATTGTAATCCAGTCGGCTTGTTCTTGCAGCATTCCCGCTCCCTTCCCTCCATAGCCACGCTCCAAACCCCAGGGTAGCCATGG CCGGGTAAAGCAAGGGCCATTTAGATTAGGAAGGTTTTTAAGATCCGCAATGTGGAGCAGCAGCCACTGCACAGGAGGAGGTGACAAACC ATTTCCAACAGCAACACAGCCACTAAAACACAAAAAGGGGGATTGGGCGGAAAGTGAGAGCCAGCAGCAAAAACTACATTTTGCAACTTG TTGGTGTGGATCTATTGGCTGATCTATGCCTTTCAACTAGAAAATTCTAATGATTGGCAAGTCACGTTGTTTTCAGGTCCAGAGTAGTTT CTTTCTGTCTGCTTTAAATGGAAACAGACTCATACCACACTTACAATTAAGGTCAAGCCCAGAAAGTGATAAGTGCAGGGAGGAAAAGTG CAAGTCCATTATGTAATAGTGACAGCAAAGGGACCAGGGGAGAGGCATTGCCTTCTCTGCCCACAGTCTTTCCGTGTGATTGTCTTTGAA TCTGAATCAGCCAGTCTCAGATGCCCCAAAGTTTCGGTTCCTATGAGCCCGGGGCATGATCTGATCCCCAAGACATGTGGAGGGGCAGCC TGTGCCTGCCTTTGTGTCAGAAAAAGGAAACCACAGTGAGCCTGAGAGAGACGGCGATTTTCGGGCTGAGAAGGCAGTAGTTTTCAAAAC ACATAGTTAAAAAAGAAACAAATGAAAAAAATTTTAGAACAGTCCAGCAAATTGCTAGTCAGGGTGAATTGTGAAATTGGGTGAAGAGCT TAGGATTCTAATCTCATGTTTTTTCCTTTTCACATTTTTAAAAGAACAATGACAAACACCCACTTATTTTTCAAGGTTTTAAAACAGTCT ACATTGAGCATTTGAAAGGTGTGCTAGAACAAGGTCTCCTGATCCGTCCGAGGCTGCTTCCCAGAGGAGCAGCTCTCCCCAGGCATTTGC CAAGGGAGGCGGATTTCCCTGGTAGTGTAGCTGTGTGGCTTTCCTTCCTGAAGAGTCCGTGGTTGCCCTAGAACCTAACACCCCCTAGCA AAACTCACAGAGCTTTCCGTTTTTTTCTTTCCTGTAAAGAAACATTTCCTTTGAACTTGATTGCCTATGGATCAAAGAAATTCAGAACAG CCTGCCTGTCCCCCCGCACTTTTTACATATATTTGTTTCATTTCTGCAGATGGAAAGTTGACATGGGTGGGGTGTCCCCATCCAGCGAGA GAGTTTCAAAAGCAAAACATCTCTGCAGTTTTTCCCAAGTACCCTGAGATACTTCCCAAAGCCCTTATGTTTAATCAGCGATGTATATAA GCCAGTTCACTTAGACAACTTTACCCTTCTTGTCCAATGTACAGGAAGTAGTTCTAAAAAAAATGCATATTAATTTCTTCCCCCAAAGCC GGATTCTTAATTCTCTGCAACACTTTGAGGACATTTATGATTGTCCCTCTGGGCCAATGCTTATACCCAGTGAGGATGCTGCAGTGAGGC TGTAAAGTGGCCCCCTGCGGCCCTAGCCTGACCCGGAGGAAAGGATGGTAGATTCTGTTAACTCTTGAAGACTCCAGTATGAAAATCAGC ATGCCCGCCTAGTTACCTACCGGAGAGTTATCCTGATAAATTAACCTCTCACAGTTAGTGATCCTGTCCTTTTAACACCTTTTTTGTGGG GTTCTCTCTGACCTTTCATCGTAAAGTGCTGGGGACCTTAAGTGATTTGCCTGTAATTTTGGATGATTAAAAAATGTGTATATATATTAG CTAATTAGAAATATTCTACTTCTCTGTTGTCAAACTGAAATTCAGAGCAAGTTCCTGAGTGCGTGGATCTGGGTCTTAGTTCTGGTTGAT TCACTCAAGAGTTCAGTGCTCATACGTATCTGCTCATTTTGACAAAGTGCCTCATGCAACCGGGCCCTCTCTCTGCGGCAGAGTCCTTAG TGGAGGGGTTTACCTGGAACATTAGTAGTTACCACAGAATACGGAAGAGCAGGTGACTGTGCTGTGCAGCTCTCTAAATGGGAATTCTCA GGTAGGAAGCAACAGCTTCAGAAAGAGCTCAAAATAAATTGGAAATGTGAATCGCAGCTGTGGGTTTTACCACCGTCTGTCTCAGAGTCC CAGGACCTTGAGTGTCATTAGTTACTTTATTGAAGGTTTTAGACCCATAGCAGCTTTGTCTCTGTCACATCAGCAATTTCAGAACCAAAA GGGAGGCTCTCTGTAGGCACAGAGCTGCACTATCACGAGCCTTTGTTTTTCTCCACAAAGTATCTAACAAAACCAATGTGCAGACTGATT GGCCTGGTCATTGGTCTCCGAGAGAGGAGGTTTGCCTGTGATTTCCTAATTATCGCTAGGGCCAAGGTGGGATTTGTAAAGCTTTACAAT AATCATTCTGGATAGAGTCCTGGGAGGTCCTTGGCAGAACTCAGTTAAATCTTTGAAGAATATTTGTAGTTATCTTAGAAGATAGCATGG GAGGTGAGGATTCCAAAAACATTTTATTTTTAAAATATCCTGTGTAACACTTGGCTCTTGGTACCTGTGGGTTAGCATCAAGTTCTCCCC AGGGTAGAATTCAATCAGAGCTCCAGTTTGCATTTGGATGTGTAAATTACAGTAATCCCATTTCCCAAACCTAAAATCTGTTTTTCTCAT CAGACTCTGAGTAACTGGTTGCTGTGTCATAACTTCATAGATGCAGGAGGCTCAGGTGATCTGTTTGAGGAGAGCACCCTAGGCAGCCTG CAGGGAATAACATACTGGCCGTTCTGACCTGTTGCCAGCAGATACACAGGACATGGATGAAATTCCCGTTTCCTCTAGTTTCTTCCTGTA GTACTCCTCTTTTAGATCCTAAGTCTCTTACAAAAGCTTTGAATACTGTGAAAATGTTTTACATTCCATTTCATTTGTGTTGTTTTTTTA ACTGCATTTTACCAGATGTTTTGATGTTATCGCTTATGTTAATAGTAATTCCCGTACGTGTTCATTTTATTTTCATGCTTTTTCAGCCAT |
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FusionGenePPI for RNF170_SFRP1 |
Go to ChiPPI (Chimeric Protein-Protein interactions) to see the chimeric PPI interaction in . |
Protein-protein interactors with each fusion partner protein in wild-type (BIOGRID-3.4.160) |
Hgene | Hgene's interactors | Tgene | Tgene's interactors |
RNF170 | UBE2U, PSMA6, RNF170, P2RY12, LPAR1, FAM134C, PON2, PRICKLE3, MYH9, TM9SF4, RAB4B, PARD6B, CHMP4B, UBE2D2, ERLIN2, ITPR1, RDH14, ERLIN1, ST7L, ABCB10, TYW1, ASPHD2, ATP13A2, PDE3B, TMBIM6 | SFRP1 | WNT1, WNT2, FZD6, WNT4, PPP1CC, PPP1CA, KIAA1522, PPP1CB |
- Retained PPIs in in-frame fusion. |
Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Still interaction with |
- Lost PPIs in in-frame fusion. |
Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Interaction lost with |
- Retained PPIs, but lost function due to frame-shift fusion. |
Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Interaction lost with |
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RelatedDrugs for RNF170_SFRP1 |
Drugs targeting genes involved in this fusion gene. (DrugBank Version 5.1.0 2018-04-02) |
Partner | Gene | UniProtAcc | DrugBank ID | Drug name | Drug activity | Drug type | Drug status |
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RelatedDiseases for RNF170_SFRP1 |
Diseases associated with fusion partners. (DisGeNet 4.0) |
Partner | Gene | Disease ID | Disease name | # pubmeds | Source |
Hgene | RNF170 | C1837015 | ATAXIA, SENSORY, AUTOSOMAL DOMINANT | 1 | UNIPROT |
Tgene | SFRP1 | C0009404 | Colorectal Neoplasms | 2 | CTD_human |
Tgene | SFRP1 | C0005586 | Bipolar Disorder | 1 | PSYGENET |
Tgene | SFRP1 | C0011570 | Mental Depression | 1 | PSYGENET |
Tgene | SFRP1 | C0011581 | Depressive disorder | 1 | PSYGENET |
Tgene | SFRP1 | C0021390 | Inflammatory Bowel Diseases | 1 | CTD_human |
Tgene | SFRP1 | C0023267 | Fibroid Tumor | 1 | CTD_human |
Tgene | SFRP1 | C1458155 | Mammary Neoplasms | 1 | CTD_human |