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Center for Computational Systems Medicine
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FusionGeneSummary

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FusionProtFeature

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FusionGeneSequence

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FusionGenePPI

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RelatedDrugs

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RelatedDiseases

Fusion gene ID: 31104

FusionGeneSummary for RGS12_RGS12

check button Fusion gene summary
Fusion gene informationFusion gene name: RGS12_RGS12
Fusion gene ID: 31104
HgeneTgene
Gene symbol

RGS12

RGS12

Gene ID

6002

6002

Gene nameregulator of G protein signaling 12regulator of G protein signaling 12
Synonyms--
Cytomap

4p16.3

4p16.3

Type of geneprotein-codingprotein-coding
Descriptionregulator of G-protein signaling 12regulator of G-protein signalling 12regulator of G-protein signaling 12regulator of G-protein signalling 12
Modification date2018051920180519
UniProtAcc

O14924

O14924

Ensembl transtripts involved in fusion geneENST00000543385, ENST00000336727, 
ENST00000344733, ENST00000382788, 
ENST00000306648, ENST00000338806, 
ENST00000508158, ENST00000538395, 
ENST00000543385, ENST00000336727, 
ENST00000344733, ENST00000382788, 
ENST00000306648, ENST00000338806, 
ENST00000508158, ENST00000538395, 
Fusion gene scores* DoF score6 X 6 X 4=1444 X 5 X 3=60
# samples 87
** MAII scorelog2(8/144*10)=-0.84799690655495
possibly effective Gene in Pan-Cancer Fusion Genes (peGinPCFGs).
DoF>8 and MAII<0
log2(7/60*10)=0.222392421336448
effective Gene in Pan-Cancer Fusion Genes (eGinPCFGs).
DoF>8 and MAII>0
Context

PubMed: RGS12 [Title/Abstract] AND RGS12 [Title/Abstract] AND fusion [Title/Abstract]

Functional or gene categories assigned by FusionGDB annotation
* DoF score (Degree of Frequency) = # partners X # break points X # cancer types
** MAII score (Major Active Isofusion Index) = log2(# samples/DoF score*10)

check button Gene ontology of each fusion partner gene with evidence of Inferred from Direct Assay (IDA) from Entrez
PartnerGeneGO IDGO termPubMed ID

check button Fusion gene information from three resources
(ChiTars (NAR, 2018), tumorfusions (NAR, 2018), Gao et al. (Cell, 2018))
* All genome coordinats were lifted-over on hg19.
* Click on the break point to see the gene structure around the break point region using the UCSC Genome Browser.
Data typeSourceCancer typeSampleHgeneHchrHbpHstrandTgeneTchrTbpTstrand
ChiTaRS3.1AI672578RGS12chr4

3422189

-RGS12chr4

3429606

-
ChiTaRS3.1BE550447RGS12chr4

3422189

-RGS12chr4

3429606

-
ChiTaRS3.1BF224007RGS12chr4

3422189

-RGS12chr4

3429606

-
ChiTaRS3.1BF908783RGS12chr4

3389317

-RGS12chr4

3388804

+
* LD: Li Ding group's fusion gene list
  RV: Roel Verhaak group's fusion gene list
  ChiTaRs fusion database

check button Open reading frame (ORF) analsis of fusion genes based on Ensembl gene isoform structure.
* Click on the break point to see the gene structure around the break point region using the UCSC Genome Browser.
ORFHenstTenstHgeneHchrHbpHstrandTgeneTchrTbpTstrand
intron-intronENST00000543385ENST00000543385RGS12chr4

3422189

-RGS12chr4

3429606

-
intron-intronENST00000543385ENST00000336727RGS12chr4

3422189

-RGS12chr4

3429606

-
intron-intronENST00000543385ENST00000344733RGS12chr4

3422189

-RGS12chr4

3429606

-
intron-intronENST00000543385ENST00000382788RGS12chr4

3422189

-RGS12chr4

3429606

-
intron-intronENST00000543385ENST00000306648RGS12chr4

3422189

-RGS12chr4

3429606

-
intron-intronENST00000543385ENST00000338806RGS12chr4

3422189

-RGS12chr4

3429606

-
intron-intronENST00000543385ENST00000508158RGS12chr4

3422189

-RGS12chr4

3429606

-
intron-intronENST00000543385ENST00000538395RGS12chr4

3422189

-RGS12chr4

3429606

-
intron-intronENST00000336727ENST00000543385RGS12chr4

3422189

-RGS12chr4

3429606

-
intron-intronENST00000336727ENST00000336727RGS12chr4

3422189

-RGS12chr4

3429606

-
intron-intronENST00000336727ENST00000344733RGS12chr4

3422189

-RGS12chr4

3429606

-
intron-intronENST00000336727ENST00000382788RGS12chr4

3422189

-RGS12chr4

3429606

-
intron-intronENST00000336727ENST00000306648RGS12chr4

3422189

-RGS12chr4

3429606

-
intron-intronENST00000336727ENST00000338806RGS12chr4

3422189

-RGS12chr4

3429606

-
intron-intronENST00000336727ENST00000508158RGS12chr4

3422189

-RGS12chr4

3429606

-
intron-intronENST00000336727ENST00000538395RGS12chr4

3422189

-RGS12chr4

3429606

-
intron-intronENST00000344733ENST00000543385RGS12chr4

3422189

-RGS12chr4

3429606

-
intron-intronENST00000344733ENST00000336727RGS12chr4

3422189

-RGS12chr4

3429606

-
intron-intronENST00000344733ENST00000344733RGS12chr4

3422189

-RGS12chr4

3429606

-
intron-intronENST00000344733ENST00000382788RGS12chr4

3422189

-RGS12chr4

3429606

-
intron-intronENST00000344733ENST00000306648RGS12chr4

3422189

-RGS12chr4

3429606

-
intron-intronENST00000344733ENST00000338806RGS12chr4

3422189

-RGS12chr4

3429606

-
intron-intronENST00000344733ENST00000508158RGS12chr4

3422189

-RGS12chr4

3429606

-
intron-intronENST00000344733ENST00000538395RGS12chr4

3422189

-RGS12chr4

3429606

-
intron-intronENST00000382788ENST00000543385RGS12chr4

3422189

-RGS12chr4

3429606

-
intron-intronENST00000382788ENST00000336727RGS12chr4

3422189

-RGS12chr4

3429606

-
intron-intronENST00000382788ENST00000344733RGS12chr4

3422189

-RGS12chr4

3429606

-
intron-intronENST00000382788ENST00000382788RGS12chr4

3422189

-RGS12chr4

3429606

-
intron-intronENST00000382788ENST00000306648RGS12chr4

3422189

-RGS12chr4

3429606

-
intron-intronENST00000382788ENST00000338806RGS12chr4

3422189

-RGS12chr4

3429606

-
intron-intronENST00000382788ENST00000508158RGS12chr4

3422189

-RGS12chr4

3429606

-
intron-intronENST00000382788ENST00000538395RGS12chr4

3422189

-RGS12chr4

3429606

-
intron-intronENST00000306648ENST00000543385RGS12chr4

3422189

-RGS12chr4

3429606

-
intron-intronENST00000306648ENST00000336727RGS12chr4

3422189

-RGS12chr4

3429606

-
intron-intronENST00000306648ENST00000344733RGS12chr4

3422189

-RGS12chr4

3429606

-
intron-intronENST00000306648ENST00000382788RGS12chr4

3422189

-RGS12chr4

3429606

-
intron-intronENST00000306648ENST00000306648RGS12chr4

3422189

-RGS12chr4

3429606

-
intron-intronENST00000306648ENST00000338806RGS12chr4

3422189

-RGS12chr4

3429606

-
intron-intronENST00000306648ENST00000508158RGS12chr4

3422189

-RGS12chr4

3429606

-
intron-intronENST00000306648ENST00000538395RGS12chr4

3422189

-RGS12chr4

3429606

-
intron-intronENST00000338806ENST00000543385RGS12chr4

3422189

-RGS12chr4

3429606

-
intron-intronENST00000338806ENST00000336727RGS12chr4

3422189

-RGS12chr4

3429606

-
intron-intronENST00000338806ENST00000344733RGS12chr4

3422189

-RGS12chr4

3429606

-
intron-intronENST00000338806ENST00000382788RGS12chr4

3422189

-RGS12chr4

3429606

-
intron-intronENST00000338806ENST00000306648RGS12chr4

3422189

-RGS12chr4

3429606

-
intron-intronENST00000338806ENST00000338806RGS12chr4

3422189

-RGS12chr4

3429606

-
intron-intronENST00000338806ENST00000508158RGS12chr4

3422189

-RGS12chr4

3429606

-
intron-intronENST00000338806ENST00000538395RGS12chr4

3422189

-RGS12chr4

3429606

-
intron-intronENST00000508158ENST00000543385RGS12chr4

3422189

-RGS12chr4

3429606

-
intron-intronENST00000508158ENST00000336727RGS12chr4

3422189

-RGS12chr4

3429606

-
intron-intronENST00000508158ENST00000344733RGS12chr4

3422189

-RGS12chr4

3429606

-
intron-intronENST00000508158ENST00000382788RGS12chr4

3422189

-RGS12chr4

3429606

-
intron-intronENST00000508158ENST00000306648RGS12chr4

3422189

-RGS12chr4

3429606

-
intron-intronENST00000508158ENST00000338806RGS12chr4

3422189

-RGS12chr4

3429606

-
intron-intronENST00000508158ENST00000508158RGS12chr4

3422189

-RGS12chr4

3429606

-
intron-intronENST00000508158ENST00000538395RGS12chr4

3422189

-RGS12chr4

3429606

-
intron-intronENST00000538395ENST00000543385RGS12chr4

3422189

-RGS12chr4

3429606

-
intron-intronENST00000538395ENST00000336727RGS12chr4

3422189

-RGS12chr4

3429606

-
intron-intronENST00000538395ENST00000344733RGS12chr4

3422189

-RGS12chr4

3429606

-
intron-intronENST00000538395ENST00000382788RGS12chr4

3422189

-RGS12chr4

3429606

-
intron-intronENST00000538395ENST00000306648RGS12chr4

3422189

-RGS12chr4

3429606

-
intron-intronENST00000538395ENST00000338806RGS12chr4

3422189

-RGS12chr4

3429606

-
intron-intronENST00000538395ENST00000508158RGS12chr4

3422189

-RGS12chr4

3429606

-
intron-intronENST00000538395ENST00000538395RGS12chr4

3422189

-RGS12chr4

3429606

-
intron-intronENST00000543385ENST00000543385RGS12chr4

3389317

-RGS12chr4

3388804

+
intron-intronENST00000543385ENST00000336727RGS12chr4

3389317

-RGS12chr4

3388804

+
intron-intronENST00000543385ENST00000344733RGS12chr4

3389317

-RGS12chr4

3388804

+
intron-intronENST00000543385ENST00000382788RGS12chr4

3389317

-RGS12chr4

3388804

+
intron-intronENST00000543385ENST00000306648RGS12chr4

3389317

-RGS12chr4

3388804

+
intron-intronENST00000543385ENST00000338806RGS12chr4

3389317

-RGS12chr4

3388804

+
intron-intronENST00000543385ENST00000508158RGS12chr4

3389317

-RGS12chr4

3388804

+
intron-intronENST00000543385ENST00000538395RGS12chr4

3389317

-RGS12chr4

3388804

+
intron-intronENST00000336727ENST00000543385RGS12chr4

3389317

-RGS12chr4

3388804

+
intron-intronENST00000336727ENST00000336727RGS12chr4

3389317

-RGS12chr4

3388804

+
intron-intronENST00000336727ENST00000344733RGS12chr4

3389317

-RGS12chr4

3388804

+
intron-intronENST00000336727ENST00000382788RGS12chr4

3389317

-RGS12chr4

3388804

+
intron-intronENST00000336727ENST00000306648RGS12chr4

3389317

-RGS12chr4

3388804

+
intron-intronENST00000336727ENST00000338806RGS12chr4

3389317

-RGS12chr4

3388804

+
intron-intronENST00000336727ENST00000508158RGS12chr4

3389317

-RGS12chr4

3388804

+
intron-intronENST00000336727ENST00000538395RGS12chr4

3389317

-RGS12chr4

3388804

+
intron-intronENST00000344733ENST00000543385RGS12chr4

3389317

-RGS12chr4

3388804

+
intron-intronENST00000344733ENST00000336727RGS12chr4

3389317

-RGS12chr4

3388804

+
intron-intronENST00000344733ENST00000344733RGS12chr4

3389317

-RGS12chr4

3388804

+
intron-intronENST00000344733ENST00000382788RGS12chr4

3389317

-RGS12chr4

3388804

+
intron-intronENST00000344733ENST00000306648RGS12chr4

3389317

-RGS12chr4

3388804

+
intron-intronENST00000344733ENST00000338806RGS12chr4

3389317

-RGS12chr4

3388804

+
intron-intronENST00000344733ENST00000508158RGS12chr4

3389317

-RGS12chr4

3388804

+
intron-intronENST00000344733ENST00000538395RGS12chr4

3389317

-RGS12chr4

3388804

+
intron-intronENST00000382788ENST00000543385RGS12chr4

3389317

-RGS12chr4

3388804

+
intron-intronENST00000382788ENST00000336727RGS12chr4

3389317

-RGS12chr4

3388804

+
intron-intronENST00000382788ENST00000344733RGS12chr4

3389317

-RGS12chr4

3388804

+
intron-intronENST00000382788ENST00000382788RGS12chr4

3389317

-RGS12chr4

3388804

+
intron-intronENST00000382788ENST00000306648RGS12chr4

3389317

-RGS12chr4

3388804

+
intron-intronENST00000382788ENST00000338806RGS12chr4

3389317

-RGS12chr4

3388804

+
intron-intronENST00000382788ENST00000508158RGS12chr4

3389317

-RGS12chr4

3388804

+
intron-intronENST00000382788ENST00000538395RGS12chr4

3389317

-RGS12chr4

3388804

+
intron-intronENST00000306648ENST00000543385RGS12chr4

3389317

-RGS12chr4

3388804

+
intron-intronENST00000306648ENST00000336727RGS12chr4

3389317

-RGS12chr4

3388804

+
intron-intronENST00000306648ENST00000344733RGS12chr4

3389317

-RGS12chr4

3388804

+
intron-intronENST00000306648ENST00000382788RGS12chr4

3389317

-RGS12chr4

3388804

+
intron-intronENST00000306648ENST00000306648RGS12chr4

3389317

-RGS12chr4

3388804

+
intron-intronENST00000306648ENST00000338806RGS12chr4

3389317

-RGS12chr4

3388804

+
intron-intronENST00000306648ENST00000508158RGS12chr4

3389317

-RGS12chr4

3388804

+
intron-intronENST00000306648ENST00000538395RGS12chr4

3389317

-RGS12chr4

3388804

+
intron-intronENST00000338806ENST00000543385RGS12chr4

3389317

-RGS12chr4

3388804

+
intron-intronENST00000338806ENST00000336727RGS12chr4

3389317

-RGS12chr4

3388804

+
intron-intronENST00000338806ENST00000344733RGS12chr4

3389317

-RGS12chr4

3388804

+
intron-intronENST00000338806ENST00000382788RGS12chr4

3389317

-RGS12chr4

3388804

+
intron-intronENST00000338806ENST00000306648RGS12chr4

3389317

-RGS12chr4

3388804

+
intron-intronENST00000338806ENST00000338806RGS12chr4

3389317

-RGS12chr4

3388804

+
intron-intronENST00000338806ENST00000508158RGS12chr4

3389317

-RGS12chr4

3388804

+
intron-intronENST00000338806ENST00000538395RGS12chr4

3389317

-RGS12chr4

3388804

+
intron-intronENST00000508158ENST00000543385RGS12chr4

3389317

-RGS12chr4

3388804

+
intron-intronENST00000508158ENST00000336727RGS12chr4

3389317

-RGS12chr4

3388804

+
intron-intronENST00000508158ENST00000344733RGS12chr4

3389317

-RGS12chr4

3388804

+
intron-intronENST00000508158ENST00000382788RGS12chr4

3389317

-RGS12chr4

3388804

+
intron-intronENST00000508158ENST00000306648RGS12chr4

3389317

-RGS12chr4

3388804

+
intron-intronENST00000508158ENST00000338806RGS12chr4

3389317

-RGS12chr4

3388804

+
intron-intronENST00000508158ENST00000508158RGS12chr4

3389317

-RGS12chr4

3388804

+
intron-intronENST00000508158ENST00000538395RGS12chr4

3389317

-RGS12chr4

3388804

+
intron-intronENST00000538395ENST00000543385RGS12chr4

3389317

-RGS12chr4

3388804

+
intron-intronENST00000538395ENST00000336727RGS12chr4

3389317

-RGS12chr4

3388804

+
intron-intronENST00000538395ENST00000344733RGS12chr4

3389317

-RGS12chr4

3388804

+
intron-intronENST00000538395ENST00000382788RGS12chr4

3389317

-RGS12chr4

3388804

+
intron-intronENST00000538395ENST00000306648RGS12chr4

3389317

-RGS12chr4

3388804

+
intron-intronENST00000538395ENST00000338806RGS12chr4

3389317

-RGS12chr4

3388804

+
intron-intronENST00000538395ENST00000508158RGS12chr4

3389317

-RGS12chr4

3388804

+
intron-intronENST00000538395ENST00000538395RGS12chr4

3389317

-RGS12chr4

3388804

+

Top

FusionProtFeatures for RGS12_RGS12


check buttonMain function of each fusion partner protein. (from UniProt)
HgeneTgene
RGS12

O14924

RGS12

O14924


check buttonRetention analysis result of each fusion partner protein across 39 protein features of UniProt such as six molecule processing features, 13 region features, four site features, six amino acid modification features, two natural variation features, five experimental info features, and 3 secondary structure features. Here, because of limited space for viewing, we only show the protein feature retention information belong to the 13 regional features. All retention annotation result can be downloaded at

download page

.

* Minus value of BPloci means that the break pointn is located before the CDS.
- In-frame and retained protein feature among the 13 regional features.
PartnerGeneHbpTbpENSTStrandBPexonTotalExonProtein feature loci*BPlociTotalLenProtein featureProtein feature note

- In-frame and not-retained protein feature among the 13 regional features.
PartnerGeneHbpTbpENSTStrandBPexonTotalExonProtein feature loci*BPlociTotalLenProtein featureProtein feature note


Top

FusionGeneSequence for RGS12_RGS12


check button For in-frame fusion transcripts, we provide the fusion transcript sequences and fusion amino acid sequences.
(nt: nucleotides, aa: amino acids)

* Fusion amino acid sequences.

* Fusion transcript sequences (only coding sequence (CDS) region).

* Fusion transcript sequences (Full-length transcript).

Top

FusionGenePPI for RGS12_RGS12


check button Go to ChiPPI (Chimeric Protein-Protein interactions) to see the chimeric PPI interaction in

ChiPPI page

.

check button Protein-protein interactors with each fusion partner protein in wild-type (BIOGRID-3.4.160)
HgeneHgene's interactorsTgeneTgene's interactors


check button - Retained PPIs in in-frame fusion.
PartnerGeneHbpTbpENSTStrandBPexonTotalExonProtein feature loci*BPlociTotalLenStill interaction with


check button - Lost PPIs in in-frame fusion.
PartnerGeneHbpTbpENSTStrandBPexonTotalExonProtein feature loci*BPlociTotalLenInteraction lost with


check button - Retained PPIs, but lost function due to frame-shift fusion.
PartnerGeneHbpTbpENSTStrandBPexonTotalExonProtein feature loci*BPlociTotalLenInteraction lost with


Top

RelatedDrugs for RGS12_RGS12


check button Drugs targeting genes involved in this fusion gene.
(DrugBank Version 5.1.0 2018-04-02)
PartnerGeneUniProtAccDrugBank IDDrug nameDrug activityDrug typeDrug status

Top

RelatedDiseases for RGS12_RGS12


check button Diseases associated with fusion partners.
(DisGeNet 4.0)
PartnerGeneDisease IDDisease name# pubmedsSource
HgeneRGS12C0036341Schizophrenia1CTD_human
TgeneRGS12C0036341Schizophrenia1CTD_human