	FusionGeneSummary
	FusionProtFeature
	FusionGeneSequence
	FusionGenePPI
	RelatedDrugs
	RelatedDiseases

Fusion gene ID: 30973

FusionGeneSummary for RERE_RERE

Fusion gene summary

Fusion gene information	Fusion gene name: RERE_RERE
	Fusion gene ID: 30973
		Hgene	Tgene
	Gene symbol	RERE	RERE
	Gene ID	473	473
	Gene name	arginine-glutamic acid dipeptide repeats	arginine-glutamic acid dipeptide repeats
	Synonyms	ARG\|ARP\|ATN1L\|DNB1\|NEDBEH	ARG\|ARP\|ATN1L\|DNB1\|NEDBEH
	Cytomap	1p36.23	1p36.23
	Type of gene	protein-coding	protein-coding
	Description	arginine-glutamic acid dipeptide repeats proteinarginine-glutamic acid dipeptide (RE) repeatsatrophin 2atrophin-1 like proteinatrophin-1 related protein	arginine-glutamic acid dipeptide repeats proteinarginine-glutamic acid dipeptide (RE) repeatsatrophin 2atrophin-1 like proteinatrophin-1 related protein
	Modification date	20180523	20180523
	UniProtAcc	Q9P2R6	Q9P2R6
	Ensembl transtripts involved in fusion gene	ENST00000337907, ENST00000377464, ENST00000400907, ENST00000400908, ENST00000476556, ENST00000460659,	ENST00000337907, ENST00000377464, ENST00000400907, ENST00000400908, ENST00000476556, ENST00000460659,
Fusion gene scores	* DoF score	19 X 16 X 9=2736	8 X 11 X 5=440
	# samples	24	13
	** MAII score	log2(24/2736*10)=-3.51096191927738 possibly effective Gene in Pan-Cancer Fusion Genes (peGinPCFGs). DoF>8 and MAII<0	log2(13/440*10)=-1.7589919004962 possibly effective Gene in Pan-Cancer Fusion Genes (peGinPCFGs). DoF>8 and MAII<0
Context	PubMed: RERE [Title/Abstract] AND RERE [Title/Abstract] AND fusion [Title/Abstract]
Functional or gene categories assigned by FusionGDB annotation

* DoF score (Degree of Frequency) = # partners X # break points X # cancer types
** MAII score (Major Active Isofusion Index) = log2(# samples/DoF score*10)

Gene ontology of each fusion partner gene with evidence of Inferred from Direct Assay (IDA) from Entrez

Partner

Gene

GO ID

GO term

PubMed ID

Fusion gene information from three resources
(ChiTars (NAR, 2018), tumorfusions (NAR, 2018), Gao et al. (Cell, 2018))
* All genome coordinats were lifted-over on hg19.
* Click on the break point to see the gene structure around the break point region using the UCSC Genome Browser.

Data type	Source	Cancer type	Sample	Hgene	Hchr	Hbp	Hstrand	Tgene	Tchr	Tbp	Tstrand
ChiTaRS3.1			AV762378	RERE	chr1	8670403	+	RERE	chr1	8663487	+
ChiTaRS3.1			BE829558	RERE	chr1	8413865	-	RERE	chr1	8413722	+
ChiTaRS3.1			AW235269	RERE	chr1	8840011	+	RERE	chr1	8834680	+
ChiTaRS3.1			BG910294	RERE	chr1	8414180	+	RERE	chr1	8414144	-
ChiTaRS3.1			AA878413	RERE	chr1	8661951	-	RERE	chr1	8661891	+

* LD: Li Ding group's fusion gene list
RV: Roel Verhaak group's fusion gene list
ChiTaRs fusion database

Open reading frame (ORF) analsis of fusion genes based on Ensembl gene isoform structure.
* Click on the break point to see the gene structure around the break point region using the UCSC Genome Browser.

ORF	Henst	Tenst	Hgene	Hchr	Hbp	Hstrand	Tgene	Tchr	Tbp	Tstrand
intron-intron	ENST00000337907	ENST00000337907	RERE	chr1	8670403	+	RERE	chr1	8663487	+
intron-intron	ENST00000337907	ENST00000377464	RERE	chr1	8670403	+	RERE	chr1	8663487	+
intron-intron	ENST00000337907	ENST00000400907	RERE	chr1	8670403	+	RERE	chr1	8663487	+
intron-intron	ENST00000337907	ENST00000400908	RERE	chr1	8670403	+	RERE	chr1	8663487	+
intron-intron	ENST00000337907	ENST00000476556	RERE	chr1	8670403	+	RERE	chr1	8663487	+
intron-intron	ENST00000337907	ENST00000460659	RERE	chr1	8670403	+	RERE	chr1	8663487	+
intron-intron	ENST00000377464	ENST00000337907	RERE	chr1	8670403	+	RERE	chr1	8663487	+
intron-intron	ENST00000377464	ENST00000377464	RERE	chr1	8670403	+	RERE	chr1	8663487	+
intron-intron	ENST00000377464	ENST00000400907	RERE	chr1	8670403	+	RERE	chr1	8663487	+
intron-intron	ENST00000377464	ENST00000400908	RERE	chr1	8670403	+	RERE	chr1	8663487	+
intron-intron	ENST00000377464	ENST00000476556	RERE	chr1	8670403	+	RERE	chr1	8663487	+
intron-intron	ENST00000377464	ENST00000460659	RERE	chr1	8670403	+	RERE	chr1	8663487	+
intron-intron	ENST00000400907	ENST00000337907	RERE	chr1	8670403	+	RERE	chr1	8663487	+
intron-intron	ENST00000400907	ENST00000377464	RERE	chr1	8670403	+	RERE	chr1	8663487	+
intron-intron	ENST00000400907	ENST00000400907	RERE	chr1	8670403	+	RERE	chr1	8663487	+
intron-intron	ENST00000400907	ENST00000400908	RERE	chr1	8670403	+	RERE	chr1	8663487	+
intron-intron	ENST00000400907	ENST00000476556	RERE	chr1	8670403	+	RERE	chr1	8663487	+
intron-intron	ENST00000400907	ENST00000460659	RERE	chr1	8670403	+	RERE	chr1	8663487	+
intron-intron	ENST00000400908	ENST00000337907	RERE	chr1	8670403	+	RERE	chr1	8663487	+
intron-intron	ENST00000400908	ENST00000377464	RERE	chr1	8670403	+	RERE	chr1	8663487	+
intron-intron	ENST00000400908	ENST00000400907	RERE	chr1	8670403	+	RERE	chr1	8663487	+
intron-intron	ENST00000400908	ENST00000400908	RERE	chr1	8670403	+	RERE	chr1	8663487	+
intron-intron	ENST00000400908	ENST00000476556	RERE	chr1	8670403	+	RERE	chr1	8663487	+
intron-intron	ENST00000400908	ENST00000460659	RERE	chr1	8670403	+	RERE	chr1	8663487	+
intron-intron	ENST00000476556	ENST00000337907	RERE	chr1	8670403	+	RERE	chr1	8663487	+
intron-intron	ENST00000476556	ENST00000377464	RERE	chr1	8670403	+	RERE	chr1	8663487	+
intron-intron	ENST00000476556	ENST00000400907	RERE	chr1	8670403	+	RERE	chr1	8663487	+
intron-intron	ENST00000476556	ENST00000400908	RERE	chr1	8670403	+	RERE	chr1	8663487	+
intron-intron	ENST00000476556	ENST00000476556	RERE	chr1	8670403	+	RERE	chr1	8663487	+
intron-intron	ENST00000476556	ENST00000460659	RERE	chr1	8670403	+	RERE	chr1	8663487	+
intron-intron	ENST00000460659	ENST00000337907	RERE	chr1	8670403	+	RERE	chr1	8663487	+
intron-intron	ENST00000460659	ENST00000377464	RERE	chr1	8670403	+	RERE	chr1	8663487	+
intron-intron	ENST00000460659	ENST00000400907	RERE	chr1	8670403	+	RERE	chr1	8663487	+
intron-intron	ENST00000460659	ENST00000400908	RERE	chr1	8670403	+	RERE	chr1	8663487	+
intron-intron	ENST00000460659	ENST00000476556	RERE	chr1	8670403	+	RERE	chr1	8663487	+
intron-intron	ENST00000460659	ENST00000460659	RERE	chr1	8670403	+	RERE	chr1	8663487	+
intron-3UTR	ENST00000337907	ENST00000337907	RERE	chr1	8413865	-	RERE	chr1	8413722	+
intron-3UTR	ENST00000337907	ENST00000377464	RERE	chr1	8413865	-	RERE	chr1	8413722	+
intron-intron	ENST00000337907	ENST00000400907	RERE	chr1	8413865	-	RERE	chr1	8413722	+
intron-intron	ENST00000337907	ENST00000400908	RERE	chr1	8413865	-	RERE	chr1	8413722	+
intron-intron	ENST00000337907	ENST00000476556	RERE	chr1	8413865	-	RERE	chr1	8413722	+
intron-intron	ENST00000337907	ENST00000460659	RERE	chr1	8413865	-	RERE	chr1	8413722	+
intron-3UTR	ENST00000377464	ENST00000337907	RERE	chr1	8413865	-	RERE	chr1	8413722	+
intron-3UTR	ENST00000377464	ENST00000377464	RERE	chr1	8413865	-	RERE	chr1	8413722	+
intron-intron	ENST00000377464	ENST00000400907	RERE	chr1	8413865	-	RERE	chr1	8413722	+
intron-intron	ENST00000377464	ENST00000400908	RERE	chr1	8413865	-	RERE	chr1	8413722	+
intron-intron	ENST00000377464	ENST00000476556	RERE	chr1	8413865	-	RERE	chr1	8413722	+
intron-intron	ENST00000377464	ENST00000460659	RERE	chr1	8413865	-	RERE	chr1	8413722	+
intron-3UTR	ENST00000400907	ENST00000337907	RERE	chr1	8413865	-	RERE	chr1	8413722	+
intron-3UTR	ENST00000400907	ENST00000377464	RERE	chr1	8413865	-	RERE	chr1	8413722	+
intron-intron	ENST00000400907	ENST00000400907	RERE	chr1	8413865	-	RERE	chr1	8413722	+
intron-intron	ENST00000400907	ENST00000400908	RERE	chr1	8413865	-	RERE	chr1	8413722	+
intron-intron	ENST00000400907	ENST00000476556	RERE	chr1	8413865	-	RERE	chr1	8413722	+
intron-intron	ENST00000400907	ENST00000460659	RERE	chr1	8413865	-	RERE	chr1	8413722	+
intron-3UTR	ENST00000400908	ENST00000337907	RERE	chr1	8413865	-	RERE	chr1	8413722	+
intron-3UTR	ENST00000400908	ENST00000377464	RERE	chr1	8413865	-	RERE	chr1	8413722	+
intron-intron	ENST00000400908	ENST00000400907	RERE	chr1	8413865	-	RERE	chr1	8413722	+
intron-intron	ENST00000400908	ENST00000400908	RERE	chr1	8413865	-	RERE	chr1	8413722	+
intron-intron	ENST00000400908	ENST00000476556	RERE	chr1	8413865	-	RERE	chr1	8413722	+
intron-intron	ENST00000400908	ENST00000460659	RERE	chr1	8413865	-	RERE	chr1	8413722	+
intron-3UTR	ENST00000476556	ENST00000337907	RERE	chr1	8413865	-	RERE	chr1	8413722	+
intron-3UTR	ENST00000476556	ENST00000377464	RERE	chr1	8413865	-	RERE	chr1	8413722	+
intron-intron	ENST00000476556	ENST00000400907	RERE	chr1	8413865	-	RERE	chr1	8413722	+
intron-intron	ENST00000476556	ENST00000400908	RERE	chr1	8413865	-	RERE	chr1	8413722	+
intron-intron	ENST00000476556	ENST00000476556	RERE	chr1	8413865	-	RERE	chr1	8413722	+
intron-intron	ENST00000476556	ENST00000460659	RERE	chr1	8413865	-	RERE	chr1	8413722	+
intron-3UTR	ENST00000460659	ENST00000337907	RERE	chr1	8413865	-	RERE	chr1	8413722	+
intron-3UTR	ENST00000460659	ENST00000377464	RERE	chr1	8413865	-	RERE	chr1	8413722	+
intron-intron	ENST00000460659	ENST00000400907	RERE	chr1	8413865	-	RERE	chr1	8413722	+
intron-intron	ENST00000460659	ENST00000400908	RERE	chr1	8413865	-	RERE	chr1	8413722	+
intron-intron	ENST00000460659	ENST00000476556	RERE	chr1	8413865	-	RERE	chr1	8413722	+
intron-intron	ENST00000460659	ENST00000460659	RERE	chr1	8413865	-	RERE	chr1	8413722	+
intron-intron	ENST00000337907	ENST00000337907	RERE	chr1	8840011	+	RERE	chr1	8834680	+
intron-intron	ENST00000337907	ENST00000377464	RERE	chr1	8840011	+	RERE	chr1	8834680	+
intron-intron	ENST00000337907	ENST00000400907	RERE	chr1	8840011	+	RERE	chr1	8834680	+
intron-intron	ENST00000337907	ENST00000400908	RERE	chr1	8840011	+	RERE	chr1	8834680	+
intron-intron	ENST00000337907	ENST00000476556	RERE	chr1	8840011	+	RERE	chr1	8834680	+
intron-intron	ENST00000337907	ENST00000460659	RERE	chr1	8840011	+	RERE	chr1	8834680	+
intron-intron	ENST00000377464	ENST00000337907	RERE	chr1	8840011	+	RERE	chr1	8834680	+
intron-intron	ENST00000377464	ENST00000377464	RERE	chr1	8840011	+	RERE	chr1	8834680	+
intron-intron	ENST00000377464	ENST00000400907	RERE	chr1	8840011	+	RERE	chr1	8834680	+
intron-intron	ENST00000377464	ENST00000400908	RERE	chr1	8840011	+	RERE	chr1	8834680	+
intron-intron	ENST00000377464	ENST00000476556	RERE	chr1	8840011	+	RERE	chr1	8834680	+
intron-intron	ENST00000377464	ENST00000460659	RERE	chr1	8840011	+	RERE	chr1	8834680	+
intron-intron	ENST00000400907	ENST00000337907	RERE	chr1	8840011	+	RERE	chr1	8834680	+
intron-intron	ENST00000400907	ENST00000377464	RERE	chr1	8840011	+	RERE	chr1	8834680	+
intron-intron	ENST00000400907	ENST00000400907	RERE	chr1	8840011	+	RERE	chr1	8834680	+
intron-intron	ENST00000400907	ENST00000400908	RERE	chr1	8840011	+	RERE	chr1	8834680	+
intron-intron	ENST00000400907	ENST00000476556	RERE	chr1	8840011	+	RERE	chr1	8834680	+
intron-intron	ENST00000400907	ENST00000460659	RERE	chr1	8840011	+	RERE	chr1	8834680	+
intron-intron	ENST00000400908	ENST00000337907	RERE	chr1	8840011	+	RERE	chr1	8834680	+
intron-intron	ENST00000400908	ENST00000377464	RERE	chr1	8840011	+	RERE	chr1	8834680	+
intron-intron	ENST00000400908	ENST00000400907	RERE	chr1	8840011	+	RERE	chr1	8834680	+
intron-intron	ENST00000400908	ENST00000400908	RERE	chr1	8840011	+	RERE	chr1	8834680	+
intron-intron	ENST00000400908	ENST00000476556	RERE	chr1	8840011	+	RERE	chr1	8834680	+
intron-intron	ENST00000400908	ENST00000460659	RERE	chr1	8840011	+	RERE	chr1	8834680	+
intron-intron	ENST00000476556	ENST00000337907	RERE	chr1	8840011	+	RERE	chr1	8834680	+
intron-intron	ENST00000476556	ENST00000377464	RERE	chr1	8840011	+	RERE	chr1	8834680	+
intron-intron	ENST00000476556	ENST00000400907	RERE	chr1	8840011	+	RERE	chr1	8834680	+
intron-intron	ENST00000476556	ENST00000400908	RERE	chr1	8840011	+	RERE	chr1	8834680	+
intron-intron	ENST00000476556	ENST00000476556	RERE	chr1	8840011	+	RERE	chr1	8834680	+
intron-intron	ENST00000476556	ENST00000460659	RERE	chr1	8840011	+	RERE	chr1	8834680	+
intron-intron	ENST00000460659	ENST00000337907	RERE	chr1	8840011	+	RERE	chr1	8834680	+
intron-intron	ENST00000460659	ENST00000377464	RERE	chr1	8840011	+	RERE	chr1	8834680	+
intron-intron	ENST00000460659	ENST00000400907	RERE	chr1	8840011	+	RERE	chr1	8834680	+
intron-intron	ENST00000460659	ENST00000400908	RERE	chr1	8840011	+	RERE	chr1	8834680	+
intron-intron	ENST00000460659	ENST00000476556	RERE	chr1	8840011	+	RERE	chr1	8834680	+
intron-intron	ENST00000460659	ENST00000460659	RERE	chr1	8840011	+	RERE	chr1	8834680	+
intron-3UTR	ENST00000337907	ENST00000337907	RERE	chr1	8414180	+	RERE	chr1	8414144	-
intron-3UTR	ENST00000337907	ENST00000377464	RERE	chr1	8414180	+	RERE	chr1	8414144	-
intron-3UTR	ENST00000337907	ENST00000400907	RERE	chr1	8414180	+	RERE	chr1	8414144	-
intron-intron	ENST00000337907	ENST00000400908	RERE	chr1	8414180	+	RERE	chr1	8414144	-
intron-intron	ENST00000337907	ENST00000476556	RERE	chr1	8414180	+	RERE	chr1	8414144	-
intron-intron	ENST00000337907	ENST00000460659	RERE	chr1	8414180	+	RERE	chr1	8414144	-
intron-3UTR	ENST00000377464	ENST00000337907	RERE	chr1	8414180	+	RERE	chr1	8414144	-
intron-3UTR	ENST00000377464	ENST00000377464	RERE	chr1	8414180	+	RERE	chr1	8414144	-
intron-3UTR	ENST00000377464	ENST00000400907	RERE	chr1	8414180	+	RERE	chr1	8414144	-
intron-intron	ENST00000377464	ENST00000400908	RERE	chr1	8414180	+	RERE	chr1	8414144	-
intron-intron	ENST00000377464	ENST00000476556	RERE	chr1	8414180	+	RERE	chr1	8414144	-
intron-intron	ENST00000377464	ENST00000460659	RERE	chr1	8414180	+	RERE	chr1	8414144	-
intron-3UTR	ENST00000400907	ENST00000337907	RERE	chr1	8414180	+	RERE	chr1	8414144	-
intron-3UTR	ENST00000400907	ENST00000377464	RERE	chr1	8414180	+	RERE	chr1	8414144	-
intron-3UTR	ENST00000400907	ENST00000400907	RERE	chr1	8414180	+	RERE	chr1	8414144	-
intron-intron	ENST00000400907	ENST00000400908	RERE	chr1	8414180	+	RERE	chr1	8414144	-
intron-intron	ENST00000400907	ENST00000476556	RERE	chr1	8414180	+	RERE	chr1	8414144	-
intron-intron	ENST00000400907	ENST00000460659	RERE	chr1	8414180	+	RERE	chr1	8414144	-
intron-3UTR	ENST00000400908	ENST00000337907	RERE	chr1	8414180	+	RERE	chr1	8414144	-
intron-3UTR	ENST00000400908	ENST00000377464	RERE	chr1	8414180	+	RERE	chr1	8414144	-
intron-3UTR	ENST00000400908	ENST00000400907	RERE	chr1	8414180	+	RERE	chr1	8414144	-
intron-intron	ENST00000400908	ENST00000400908	RERE	chr1	8414180	+	RERE	chr1	8414144	-
intron-intron	ENST00000400908	ENST00000476556	RERE	chr1	8414180	+	RERE	chr1	8414144	-
intron-intron	ENST00000400908	ENST00000460659	RERE	chr1	8414180	+	RERE	chr1	8414144	-
intron-3UTR	ENST00000476556	ENST00000337907	RERE	chr1	8414180	+	RERE	chr1	8414144	-
intron-3UTR	ENST00000476556	ENST00000377464	RERE	chr1	8414180	+	RERE	chr1	8414144	-
intron-3UTR	ENST00000476556	ENST00000400907	RERE	chr1	8414180	+	RERE	chr1	8414144	-
intron-intron	ENST00000476556	ENST00000400908	RERE	chr1	8414180	+	RERE	chr1	8414144	-
intron-intron	ENST00000476556	ENST00000476556	RERE	chr1	8414180	+	RERE	chr1	8414144	-
intron-intron	ENST00000476556	ENST00000460659	RERE	chr1	8414180	+	RERE	chr1	8414144	-
intron-3UTR	ENST00000460659	ENST00000337907	RERE	chr1	8414180	+	RERE	chr1	8414144	-
intron-3UTR	ENST00000460659	ENST00000377464	RERE	chr1	8414180	+	RERE	chr1	8414144	-
intron-3UTR	ENST00000460659	ENST00000400907	RERE	chr1	8414180	+	RERE	chr1	8414144	-
intron-intron	ENST00000460659	ENST00000400908	RERE	chr1	8414180	+	RERE	chr1	8414144	-
intron-intron	ENST00000460659	ENST00000476556	RERE	chr1	8414180	+	RERE	chr1	8414144	-
intron-intron	ENST00000460659	ENST00000460659	RERE	chr1	8414180	+	RERE	chr1	8414144	-
intron-intron	ENST00000337907	ENST00000337907	RERE	chr1	8661951	-	RERE	chr1	8661891	+
intron-intron	ENST00000337907	ENST00000377464	RERE	chr1	8661951	-	RERE	chr1	8661891	+
intron-intron	ENST00000337907	ENST00000400907	RERE	chr1	8661951	-	RERE	chr1	8661891	+
intron-intron	ENST00000337907	ENST00000400908	RERE	chr1	8661951	-	RERE	chr1	8661891	+
intron-intron	ENST00000337907	ENST00000476556	RERE	chr1	8661951	-	RERE	chr1	8661891	+
intron-intron	ENST00000337907	ENST00000460659	RERE	chr1	8661951	-	RERE	chr1	8661891	+
intron-intron	ENST00000377464	ENST00000337907	RERE	chr1	8661951	-	RERE	chr1	8661891	+
intron-intron	ENST00000377464	ENST00000377464	RERE	chr1	8661951	-	RERE	chr1	8661891	+
intron-intron	ENST00000377464	ENST00000400907	RERE	chr1	8661951	-	RERE	chr1	8661891	+
intron-intron	ENST00000377464	ENST00000400908	RERE	chr1	8661951	-	RERE	chr1	8661891	+
intron-intron	ENST00000377464	ENST00000476556	RERE	chr1	8661951	-	RERE	chr1	8661891	+
intron-intron	ENST00000377464	ENST00000460659	RERE	chr1	8661951	-	RERE	chr1	8661891	+
intron-intron	ENST00000400907	ENST00000337907	RERE	chr1	8661951	-	RERE	chr1	8661891	+
intron-intron	ENST00000400907	ENST00000377464	RERE	chr1	8661951	-	RERE	chr1	8661891	+
intron-intron	ENST00000400907	ENST00000400907	RERE	chr1	8661951	-	RERE	chr1	8661891	+
intron-intron	ENST00000400907	ENST00000400908	RERE	chr1	8661951	-	RERE	chr1	8661891	+
intron-intron	ENST00000400907	ENST00000476556	RERE	chr1	8661951	-	RERE	chr1	8661891	+
intron-intron	ENST00000400907	ENST00000460659	RERE	chr1	8661951	-	RERE	chr1	8661891	+
intron-intron	ENST00000400908	ENST00000337907	RERE	chr1	8661951	-	RERE	chr1	8661891	+
intron-intron	ENST00000400908	ENST00000377464	RERE	chr1	8661951	-	RERE	chr1	8661891	+
intron-intron	ENST00000400908	ENST00000400907	RERE	chr1	8661951	-	RERE	chr1	8661891	+
intron-intron	ENST00000400908	ENST00000400908	RERE	chr1	8661951	-	RERE	chr1	8661891	+
intron-intron	ENST00000400908	ENST00000476556	RERE	chr1	8661951	-	RERE	chr1	8661891	+
intron-intron	ENST00000400908	ENST00000460659	RERE	chr1	8661951	-	RERE	chr1	8661891	+
intron-intron	ENST00000476556	ENST00000337907	RERE	chr1	8661951	-	RERE	chr1	8661891	+
intron-intron	ENST00000476556	ENST00000377464	RERE	chr1	8661951	-	RERE	chr1	8661891	+
intron-intron	ENST00000476556	ENST00000400907	RERE	chr1	8661951	-	RERE	chr1	8661891	+
intron-intron	ENST00000476556	ENST00000400908	RERE	chr1	8661951	-	RERE	chr1	8661891	+
intron-intron	ENST00000476556	ENST00000476556	RERE	chr1	8661951	-	RERE	chr1	8661891	+
intron-intron	ENST00000476556	ENST00000460659	RERE	chr1	8661951	-	RERE	chr1	8661891	+
intron-intron	ENST00000460659	ENST00000337907	RERE	chr1	8661951	-	RERE	chr1	8661891	+
intron-intron	ENST00000460659	ENST00000377464	RERE	chr1	8661951	-	RERE	chr1	8661891	+
intron-intron	ENST00000460659	ENST00000400907	RERE	chr1	8661951	-	RERE	chr1	8661891	+
intron-intron	ENST00000460659	ENST00000400908	RERE	chr1	8661951	-	RERE	chr1	8661891	+
intron-intron	ENST00000460659	ENST00000476556	RERE	chr1	8661951	-	RERE	chr1	8661891	+
intron-intron	ENST00000460659	ENST00000460659	RERE	chr1	8661951	-	RERE	chr1	8661891	+

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FusionProtFeatures for RERE_RERE

Main function of each fusion partner protein. (from UniProt)

Hgene	Tgene
RERE Q9P2R6	RERE Q9P2R6
Plays a role as a transcriptional repressor duringdevelopment. May play a role in the control of cell survival.Overexpression of RERE recruits BAX to the nucleus particularly toPOD and triggers caspase-3 activation, leading to cell death.{ECO:0000269\|PubMed:11331249}.	Plays a role as a transcriptional repressor duringdevelopment. May play a role in the control of cell survival.Overexpression of RERE recruits BAX to the nucleus particularly toPOD and triggers caspase-3 activation, leading to cell death.{ECO:0000269\|PubMed:11331249}.

Retention analysis result of each fusion partner protein across 39 protein features of UniProt such as six molecule processing features, 13 region features, four site features, six amino acid modification features, two natural variation features, five experimental info features, and 3 secondary structure features. Here, because of limited space for viewing, we only show the protein feature retention information belong to the 13 regional features. All retention annotation result can be downloaded at
download page
.

* Minus value of BPloci means that the break pointn is located before the CDS.

- In-frame and retained protein feature among the 13 regional features.

Partner

Gene

Hbp

Tbp

ENST

Strand

BPexon

TotalExon

Protein feature loci

*BPloci

TotalLen

Protein feature

Protein feature note

- In-frame and not-retained protein feature among the 13 regional features.

Partner

Gene

Hbp

Tbp

ENST

Strand

BPexon

TotalExon

Protein feature loci

*BPloci

TotalLen

Protein feature

Protein feature note

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FusionGeneSequence for RERE_RERE

For in-frame fusion transcripts, we provide the fusion transcript sequences and fusion amino acid sequences.
(nt: nucleotides, aa: amino acids)

* Fusion amino acid sequences.

* Fusion transcript sequences (only coding sequence (CDS) region).

* Fusion transcript sequences (Full-length transcript).

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FusionGenePPI for RERE_RERE

Go to ChiPPI (Chimeric Protein-Protein interactions) to see the chimeric PPI interaction in
ChiPPI page
.

Protein-protein interactors with each fusion partner protein in wild-type (BIOGRID-3.4.160)

Hgene

Hgene's interactors

Tgene

Tgene's interactors

- Retained PPIs in in-frame fusion.

Partner

Gene

Hbp

Tbp

ENST

Strand

BPexon

TotalExon

Protein feature loci

*BPloci

TotalLen

Still interaction with

- Lost PPIs in in-frame fusion.

Partner

Gene

Hbp

Tbp

ENST

Strand

BPexon

TotalExon

Protein feature loci

*BPloci

TotalLen

Interaction lost with

- Retained PPIs, but lost function due to frame-shift fusion.

Partner

Gene

Hbp

Tbp

ENST

Strand

BPexon

TotalExon

Protein feature loci

*BPloci

TotalLen

Interaction lost with

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RelatedDrugs for RERE_RERE

Drugs targeting genes involved in this fusion gene.
(DrugBank Version 5.1.0 2018-04-02)

Partner

Gene

UniProtAcc

DrugBank ID

Drug name

Drug activity

Drug type

Drug status

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RelatedDiseases for RERE_RERE

Diseases associated with fusion partners.
(DisGeNet 4.0)

Partner	Gene	Disease ID	Disease name	# pubmeds	Source
Hgene	RERE	C3495559	Juvenile arthritis	1	CTD_human
Tgene	RERE	C3495559	Juvenile arthritis	1	CTD_human

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Fusion gene ID: 30973

FusionGeneSummary for RERE_RERE

FusionProtFeatures for RERE_RERE

FusionGeneSequence for RERE_RERE

FusionGenePPI for RERE_RERE

RelatedDrugs for RERE_RERE

RelatedDiseases for RERE_RERE