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Fusion gene ID: 30885 |
FusionGeneSummary for RCOR1_PPP2R5C |
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Fusion gene information | Fusion gene name: RCOR1_PPP2R5C | Fusion gene ID: 30885 | Hgene | Tgene | Gene symbol | RCOR1 | PPP2R5C | Gene ID | 23186 | 5527 |
Gene name | REST corepressor 1 | protein phosphatase 2 regulatory subunit B'gamma | |
Synonyms | COREST|RCOR | B56G|B56gamma|PR61G | |
Cytomap | 14q32.31-q32.32 | 14q32.31 | |
Type of gene | protein-coding | protein-coding | |
Description | REST corepressor 1 | serine/threonine-protein phosphatase 2A 56 kDa regulatory subunit gamma isoformB' alpha regulatory subunitPP2A B subunit isoform B'-gammaPP2A B subunit isoform B56-gammaPP2A B subunit isoform PR61-gammaPP2A B subunit isoform R5-gammaprotein phosphat | |
Modification date | 20180523 | 20180523 | |
UniProtAcc | Q9UKL0 | Q13362 | |
Ensembl transtripts involved in fusion gene | ENST00000262241, ENST00000570597, | ENST00000422945, ENST00000556068, ENST00000554442, ENST00000328724, ENST00000350249, ENST00000445439, ENST00000334743, ENST00000557095, ENST00000556260, ENST00000556946, ENST00000557714, | |
Fusion gene scores | * DoF score | 8 X 8 X 10=640 | 10 X 9 X 8=720 |
# samples | 12 | 13 | |
** MAII score | log2(12/640*10)=-2.41503749927884 possibly effective Gene in Pan-Cancer Fusion Genes (peGinPCFGs). DoF>8 and MAII<0 | log2(13/720*10)=-2.46948528330122 possibly effective Gene in Pan-Cancer Fusion Genes (peGinPCFGs). DoF>8 and MAII<0 | |
Context | PubMed: RCOR1 [Title/Abstract] AND PPP2R5C [Title/Abstract] AND fusion [Title/Abstract] | ||
Functional or gene categories assigned by FusionGDB annotation | Tumor suppressor gene involved fusion gene, in-frame but not retained their domain. Tumor suppressor gene involved fusion gene, retained protein feature but frameshift. DDR (DNA damage repair) gene involved fusion gene, in-frame but not retained their domain. |
* DoF score (Degree of Frequency) = # partners X # break points X # cancer types ** MAII score (Major Active Isofusion Index) = log2(# samples/DoF score*10) |
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Partner | Gene | GO ID | GO term | PubMed ID |
Hgene | RCOR1 | GO:0045892 | negative regulation of transcription, DNA-templated | 10449787 |
Hgene | RCOR1 | GO:0070933 | histone H4 deacetylation | 17555596 |
Tgene | PPP2R5C | GO:0008285 | negative regulation of cell proliferation | 17245430 |
![]() (ChiTars (NAR, 2018), tumorfusions (NAR, 2018), Gao et al. (Cell, 2018)) * All genome coordinats were lifted-over on hg19. * Click on the break point to see the gene structure around the break point region using the UCSC Genome Browser. |
Data type | Source | Cancer type | Sample | Hgene | Hchr | Hbp | Hstrand | Tgene | Tchr | Tbp | Tstrand |
TCGA | RV | ACC | TCGA-OR-A5J7-01A | RCOR1 | chr14 | 103148315 | + | PPP2R5C | chr14 | 102323023 | + |
TCGA | RV | OV | TCGA-13-1410-01A | RCOR1 | chr14 | 103059662 | + | PPP2R5C | chr14 | 102391478 | + |
* LD: Li Ding group's fusion gene list RV: Roel Verhaak group's fusion gene list ChiTaRs fusion database |
![]() * Click on the break point to see the gene structure around the break point region using the UCSC Genome Browser. |
ORF | Henst | Tenst | Hgene | Hchr | Hbp | Hstrand | Tgene | Tchr | Tbp | Tstrand |
In-frame | ENST00000262241 | ENST00000422945 | RCOR1 | chr14 | 103148315 | + | PPP2R5C | chr14 | 102323023 | + |
5CDS-intron | ENST00000262241 | ENST00000556068 | RCOR1 | chr14 | 103148315 | + | PPP2R5C | chr14 | 102323023 | + |
5CDS-intron | ENST00000262241 | ENST00000554442 | RCOR1 | chr14 | 103148315 | + | PPP2R5C | chr14 | 102323023 | + |
5CDS-intron | ENST00000262241 | ENST00000328724 | RCOR1 | chr14 | 103148315 | + | PPP2R5C | chr14 | 102323023 | + |
5CDS-intron | ENST00000262241 | ENST00000350249 | RCOR1 | chr14 | 103148315 | + | PPP2R5C | chr14 | 102323023 | + |
5CDS-intron | ENST00000262241 | ENST00000445439 | RCOR1 | chr14 | 103148315 | + | PPP2R5C | chr14 | 102323023 | + |
5CDS-intron | ENST00000262241 | ENST00000334743 | RCOR1 | chr14 | 103148315 | + | PPP2R5C | chr14 | 102323023 | + |
5CDS-intron | ENST00000262241 | ENST00000557095 | RCOR1 | chr14 | 103148315 | + | PPP2R5C | chr14 | 102323023 | + |
5CDS-intron | ENST00000262241 | ENST00000556260 | RCOR1 | chr14 | 103148315 | + | PPP2R5C | chr14 | 102323023 | + |
5CDS-intron | ENST00000262241 | ENST00000556946 | RCOR1 | chr14 | 103148315 | + | PPP2R5C | chr14 | 102323023 | + |
5CDS-intron | ENST00000262241 | ENST00000557714 | RCOR1 | chr14 | 103148315 | + | PPP2R5C | chr14 | 102323023 | + |
In-frame | ENST00000570597 | ENST00000422945 | RCOR1 | chr14 | 103148315 | + | PPP2R5C | chr14 | 102323023 | + |
5CDS-intron | ENST00000570597 | ENST00000556068 | RCOR1 | chr14 | 103148315 | + | PPP2R5C | chr14 | 102323023 | + |
5CDS-intron | ENST00000570597 | ENST00000554442 | RCOR1 | chr14 | 103148315 | + | PPP2R5C | chr14 | 102323023 | + |
5CDS-intron | ENST00000570597 | ENST00000328724 | RCOR1 | chr14 | 103148315 | + | PPP2R5C | chr14 | 102323023 | + |
5CDS-intron | ENST00000570597 | ENST00000350249 | RCOR1 | chr14 | 103148315 | + | PPP2R5C | chr14 | 102323023 | + |
5CDS-intron | ENST00000570597 | ENST00000445439 | RCOR1 | chr14 | 103148315 | + | PPP2R5C | chr14 | 102323023 | + |
5CDS-intron | ENST00000570597 | ENST00000334743 | RCOR1 | chr14 | 103148315 | + | PPP2R5C | chr14 | 102323023 | + |
5CDS-intron | ENST00000570597 | ENST00000557095 | RCOR1 | chr14 | 103148315 | + | PPP2R5C | chr14 | 102323023 | + |
5CDS-intron | ENST00000570597 | ENST00000556260 | RCOR1 | chr14 | 103148315 | + | PPP2R5C | chr14 | 102323023 | + |
5CDS-intron | ENST00000570597 | ENST00000556946 | RCOR1 | chr14 | 103148315 | + | PPP2R5C | chr14 | 102323023 | + |
5CDS-intron | ENST00000570597 | ENST00000557714 | RCOR1 | chr14 | 103148315 | + | PPP2R5C | chr14 | 102323023 | + |
In-frame | ENST00000262241 | ENST00000422945 | RCOR1 | chr14 | 103059662 | + | PPP2R5C | chr14 | 102391478 | + |
5CDS-intron | ENST00000262241 | ENST00000556068 | RCOR1 | chr14 | 103059662 | + | PPP2R5C | chr14 | 102391478 | + |
5CDS-intron | ENST00000262241 | ENST00000554442 | RCOR1 | chr14 | 103059662 | + | PPP2R5C | chr14 | 102391478 | + |
5CDS-intron | ENST00000262241 | ENST00000328724 | RCOR1 | chr14 | 103059662 | + | PPP2R5C | chr14 | 102391478 | + |
5CDS-intron | ENST00000262241 | ENST00000350249 | RCOR1 | chr14 | 103059662 | + | PPP2R5C | chr14 | 102391478 | + |
5CDS-intron | ENST00000262241 | ENST00000445439 | RCOR1 | chr14 | 103059662 | + | PPP2R5C | chr14 | 102391478 | + |
5CDS-intron | ENST00000262241 | ENST00000334743 | RCOR1 | chr14 | 103059662 | + | PPP2R5C | chr14 | 102391478 | + |
5CDS-intron | ENST00000262241 | ENST00000557095 | RCOR1 | chr14 | 103059662 | + | PPP2R5C | chr14 | 102391478 | + |
5CDS-intron | ENST00000262241 | ENST00000556260 | RCOR1 | chr14 | 103059662 | + | PPP2R5C | chr14 | 102391478 | + |
5CDS-intron | ENST00000262241 | ENST00000556946 | RCOR1 | chr14 | 103059662 | + | PPP2R5C | chr14 | 102391478 | + |
5CDS-intron | ENST00000262241 | ENST00000557714 | RCOR1 | chr14 | 103059662 | + | PPP2R5C | chr14 | 102391478 | + |
In-frame | ENST00000570597 | ENST00000422945 | RCOR1 | chr14 | 103059662 | + | PPP2R5C | chr14 | 102391478 | + |
5CDS-intron | ENST00000570597 | ENST00000556068 | RCOR1 | chr14 | 103059662 | + | PPP2R5C | chr14 | 102391478 | + |
5CDS-intron | ENST00000570597 | ENST00000554442 | RCOR1 | chr14 | 103059662 | + | PPP2R5C | chr14 | 102391478 | + |
5CDS-intron | ENST00000570597 | ENST00000328724 | RCOR1 | chr14 | 103059662 | + | PPP2R5C | chr14 | 102391478 | + |
5CDS-intron | ENST00000570597 | ENST00000350249 | RCOR1 | chr14 | 103059662 | + | PPP2R5C | chr14 | 102391478 | + |
5CDS-intron | ENST00000570597 | ENST00000445439 | RCOR1 | chr14 | 103059662 | + | PPP2R5C | chr14 | 102391478 | + |
5CDS-intron | ENST00000570597 | ENST00000334743 | RCOR1 | chr14 | 103059662 | + | PPP2R5C | chr14 | 102391478 | + |
5CDS-intron | ENST00000570597 | ENST00000557095 | RCOR1 | chr14 | 103059662 | + | PPP2R5C | chr14 | 102391478 | + |
5CDS-intron | ENST00000570597 | ENST00000556260 | RCOR1 | chr14 | 103059662 | + | PPP2R5C | chr14 | 102391478 | + |
5CDS-intron | ENST00000570597 | ENST00000556946 | RCOR1 | chr14 | 103059662 | + | PPP2R5C | chr14 | 102391478 | + |
5CDS-intron | ENST00000570597 | ENST00000557714 | RCOR1 | chr14 | 103059662 | + | PPP2R5C | chr14 | 102391478 | + |
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FusionProtFeatures for RCOR1_PPP2R5C |
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Hgene | Tgene |
RCOR1 | PPP2R5C |
Essential component of the BHC complex, a corepressorcomplex that represses transcription of neuron-specific genes innon-neuronal cells. The BHC complex is recruited at RE1/NRSE sitesby REST and acts by deacetylating and demethylating specific siteson histones, thereby acting as a chromatin modifier. In the BHCcomplex, it serves as a molecular beacon for the recruitment ofmolecular machinery, including MeCP2 and SUV39H1, that imposessilencing across a chromosomal interval. Plays a central role indemethylation of Lys-4 of histone H3 by promoting demethylaseactivity of KDM1A on core histones and nucleosomal substrates. Italso protects KDM1A from the proteasome. Component of aRCOR/GFI/KDM1A/HDAC complex that suppresses, via histonedeacetylase (HDAC) recruitment, a number of genes implicated inmultilineage blood cell development and controls hematopoieticdifferentiation. {ECO:0000269|PubMed:11171972,ECO:0000269|PubMed:11516394, ECO:0000269|PubMed:12032298,ECO:0000269|PubMed:12399542, ECO:0000269|PubMed:12493763,ECO:0000269|PubMed:16079794, ECO:0000269|PubMed:16140033}. | The B regulatory subunit might modulate substrateselectivity and catalytic activity, and also might direct thelocalization of the catalytic enzyme to a particular subcellularcompartment. The PP2A-PPP2R5C holoenzyme may specificallydephosphorylate and activate TP53 and play a role in DNA damage-induced inhibition of cell proliferation. PP2A-PPP2R5C may alsoregulate the ERK signaling pathway through ERK dephosphorylation.{ECO:0000269|PubMed:16456541, ECO:0000269|PubMed:17245430}. |
![]() * Minus value of BPloci means that the break pointn is located before the CDS. |
- In-frame and retained protein feature among the 13 regional features. |
Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Protein feature | Protein feature note |
Hgene | RCOR1 | chr14:103059662 | chr14:102391478 | ENST00000570597 | + | 2 | 12 | 21_77 | 117 | 483 | Compositional bias | Note=Ala-rich |
Hgene | RCOR1 | chr14:103148315 | chr14:102323023 | ENST00000570597 | + | 3 | 12 | 21_77 | 145 | 483 | Compositional bias | Note=Ala-rich |
Tgene | >PPP2R5C | chr14:103059662 | chr14:102391478 | ENST00000445439 | + | 0 | 12 | 416_422 | -16 | 450 | Motif | Nuclear localization signal |
Tgene | >PPP2R5C | chr14:103148315 | chr14:102323023 | ENST00000328724 | + | 2 | 15 | 416_422 | 86 | 541 | Motif | Nuclear localization signal |
Tgene | >PPP2R5C | chr14:103148315 | chr14:102323023 | ENST00000334743 | + | 0 | 14 | 416_422 | 31 | 525 | Motif | Nuclear localization signal |
Tgene | >PPP2R5C | chr14:103148315 | chr14:102323023 | ENST00000350249 | + | 0 | 13 | 416_422 | 31 | 486 | Motif | Nuclear localization signal |
Tgene | >PPP2R5C | chr14:103148315 | chr14:102323023 | ENST00000422945 | + | 2 | 16 | 416_422 | 62 | 556 | Motif | Nuclear localization signal |
Tgene | >PPP2R5C | chr14:103148315 | chr14:102323023 | ENST00000445439 | + | 0 | 12 | 416_422 | 31 | 450 | Motif | Nuclear localization signal |
- In-frame and not-retained protein feature among the 13 regional features. |
Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Protein feature | Protein feature note |
Hgene | >RCOR1 | chr14:103059662 | chr14:102391478 | ENST00000570597 | + | 2 | 12 | 244_273 | 117 | 483 | Coiled coil | Ontology_term=ECO:0000255 |
Hgene | >RCOR1 | chr14:103059662 | chr14:102391478 | ENST00000570597 | + | 2 | 12 | 334_369 | 117 | 483 | Coiled coil | Ontology_term=ECO:0000255 |
Hgene | >RCOR1 | chr14:103148315 | chr14:102323023 | ENST00000570597 | + | 3 | 12 | 244_273 | 145 | 483 | Coiled coil | Ontology_term=ECO:0000255 |
Hgene | >RCOR1 | chr14:103148315 | chr14:102323023 | ENST00000570597 | + | 3 | 12 | 334_369 | 145 | 483 | Coiled coil | Ontology_term=ECO:0000255 |
Hgene | >RCOR1 | chr14:103059662 | chr14:102391478 | ENST00000570597 | + | 2 | 12 | 103_189 | 117 | 483 | Domain | ELM2 |
Hgene | >RCOR1 | chr14:103059662 | chr14:102391478 | ENST00000570597 | + | 2 | 12 | 190_241 | 117 | 483 | Domain | SANT 1 |
Hgene | >RCOR1 | chr14:103059662 | chr14:102391478 | ENST00000570597 | + | 2 | 12 | 381_432 | 117 | 483 | Domain | SANT 2 |
Hgene | >RCOR1 | chr14:103148315 | chr14:102323023 | ENST00000570597 | + | 3 | 12 | 103_189 | 145 | 483 | Domain | ELM2 |
Hgene | >RCOR1 | chr14:103148315 | chr14:102323023 | ENST00000570597 | + | 3 | 12 | 190_241 | 145 | 483 | Domain | SANT 1 |
Hgene | >RCOR1 | chr14:103148315 | chr14:102323023 | ENST00000570597 | + | 3 | 12 | 381_432 | 145 | 483 | Domain | SANT 2 |
Tgene | PPP2R5C | chr14:103059662 | chr14:102391478 | ENST00000328724 | + | 13 | 15 | 416_422 | 497 | 541 | Motif | Nuclear localization signal |
Tgene | PPP2R5C | chr14:103059662 | chr14:102391478 | ENST00000334743 | + | 12 | 14 | 416_422 | 481 | 525 | Motif | Nuclear localization signal |
Tgene | PPP2R5C | chr14:103059662 | chr14:102391478 | ENST00000350249 | + | 11 | 13 | 416_422 | 442 | 486 | Motif | Nuclear localization signal |
Tgene | PPP2R5C | chr14:103059662 | chr14:102391478 | ENST00000422945 | + | 14 | 16 | 416_422 | 512 | 556 | Motif | Nuclear localization signal |
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FusionGeneSequence for RCOR1_PPP2R5C |
![]() (nt: nucleotides, aa: amino acids) |
* Fusion amino acid sequences. |
>In-frame_RCOR1_ENST00000262241_chr14_103148315_+_PPP2R5C_ENST00000422945_chr14_102323023_+_642aa MPAMVEKGPEVSGKRRGRNNAAASASAAAASAAASAACASPAATAASGAAASSASAAAASAAAAPNNGQNKSLAAAAPNGNSSSNSWEEG SSGSSSDEEHGGGGMRVGPQYQAVVPDFDPAKLARRSQERDNLGMLVWSPNQNLSEAKYVPPADQEKLFIQKLRQCCVLFDFVSDPLSDL KWKEVKRAALSEMVEYITHNRNVITEPIYPEVVHMFAVNMFRTLPPSSNPTGAEFDPEEDEPTLEAAWPHLQLVYEFFLRFLESPDFQPN IAKKYIDQKFVLQLLELFDSEDPRERDFLKTTLHRIYGKFLGLRAYIRKQINNIFYRFIYETEHHNGIAELLEILGSIINGFALPLKEEH KIFLLKVLLPLHKVKSLSVYHPQLAYCVVQFLEKDSTLTEPVVMALLKYWPKTHSPKEVMFLNELEEILDVIEPSEFVKIMEPLFRQLAK CVSSPHFQVAERALYYWNNEYIMSLISDNAAKILPIMFPSLYRNSKTHWNKTIHGLIYNALKLFMEMNQKLFDDCTQQFKAEKLKEKLKM KEREEAWVKIENLAKANPQYTVYSQASTMSIPVAMETDGPLFEDVQMLRKTVKDEAHQAQKDPKKDRPLARRKSELPQDPHTKKALEAHC >In-frame_RCOR1_ENST00000570597_chr14_103148315_+_PPP2R5C_ENST00000422945_chr14_102323023_+_639aa MVEKGPEVSGKRRGRNNAAASASAAAASAAASAACASPAATAASGAAASSASAAAASAAAAPNNGQNKSLAAAAPNGNSSSNSWEEGSSG SSSDEEHGGGGMRVGPQYQAVVPDFDPAKLARRSQERDNLGMLVWSPNQNLSEAKYVPPADQEKLFIQKLRQCCVLFDFVSDPLSDLKWK EVKRAALSEMVEYITHNRNVITEPIYPEVVHMFAVNMFRTLPPSSNPTGAEFDPEEDEPTLEAAWPHLQLVYEFFLRFLESPDFQPNIAK KYIDQKFVLQLLELFDSEDPRERDFLKTTLHRIYGKFLGLRAYIRKQINNIFYRFIYETEHHNGIAELLEILGSIINGFALPLKEEHKIF LLKVLLPLHKVKSLSVYHPQLAYCVVQFLEKDSTLTEPVVMALLKYWPKTHSPKEVMFLNELEEILDVIEPSEFVKIMEPLFRQLAKCVS SPHFQVAERALYYWNNEYIMSLISDNAAKILPIMFPSLYRNSKTHWNKTIHGLIYNALKLFMEMNQKLFDDCTQQFKAEKLKEKLKMKER EEAWVKIENLAKANPQYTVYSQASTMSIPVAMETDGPLFEDVQMLRKTVKDEAHQAQKDPKKDRPLARRKSELPQDPHTKKALEAHCRAD >In-frame_RCOR1_ENST00000262241_chr14_103059662_+_PPP2R5C_ENST00000422945_chr14_102391478_+_164aa MPAMVEKGPEVSGKRRGRNNAAASASAAAASAAASAACASPAATAASGAAASSASAAAASAAAAPNNGQNKSLAAAAPNGNSSSNSWEEG >In-frame_RCOR1_ENST00000570597_chr14_103059662_+_PPP2R5C_ENST00000422945_chr14_102391478_+_161aa MVEKGPEVSGKRRGRNNAAASASAAAASAAASAACASPAATAASGAAASSASAAAASAAAAPNNGQNKSLAAAAPNGNSSSNSWEEGSSG |
* Fusion transcript sequences (only coding sequence (CDS) region). |
>In-frame_RCOR1_ENST00000262241_chr14_103148315_+_PPP2R5C_ENST00000422945_chr14_102323023_+_1926nt ATGCCGGCCATGGTGGAGAAGGGCCCCGAGGTCTCAGGGAAGCGGAGAGGGAGGAACAACGCGGCCGCCTCCGCCTCCGCCGCCGCCGCC TCCGCCGCCGCCTCGGCCGCCTGCGCCTCGCCAGCCGCCACTGCCGCCTCGGGCGCCGCCGCCTCCTCAGCCTCGGCCGCCGCCGCCTCA GCCGCCGCCGCCCCCAATAATGGCCAGAATAAAAGTTTGGCGGCGGCGGCGCCCAATGGCAACAGCAGCAGCAACTCCTGGGAGGAAGGC AGCTCGGGCTCGTCCAGCGACGAGGAGCACGGTGGCGGTGGCATGAGGGTCGGACCCCAGTACCAGGCGGTGGTGCCCGACTTCGACCCC GCCAAACTGGCAAGACGCAGTCAAGAACGGGACAATCTTGGCATGTTGGTCTGGTCACCCAATCAAAATCTGTCAGAAGCAAAGTATGTT CCTCCTGCTGATCAAGAGAAGCTTTTTATCCAGAAGTTACGTCAGTGTTGCGTCCTCTTTGACTTTGTTTCTGATCCACTAAGTGACCTA AAGTGGAAGGAAGTAAAACGAGCTGCTTTAAGTGAAATGGTAGAATATATCACCCATAATCGGAATGTGATCACAGAGCCTATTTACCCA GAAGTAGTCCATATGTTTGCAGTTAACATGTTTCGAACATTACCACCTTCCTCCAATCCTACGGGAGCGGAATTTGACCCGGAGGAAGAT GAACCAACGTTAGAAGCAGCCTGGCCTCATCTACAGCTTGTTTATGAATTTTTCTTAAGATTTTTAGAGTCTCCAGATTTCCAACCTAAT ATAGCGAAGAAATATATTGATCAGAAGTTTGTATTGCAGCTTTTAGAGCTCTTTGACAGTGAAGATCCTCGGGAGAGAGATTTTCTTAAA ACCACCCTTCACAGAATCTATGGGAAATTCCTAGGCTTGAGAGCTTACATCAGAAAACAGATAAATAATATATTTTATAGGTTTATTTAT GAAACAGAGCATCATAATGGCATAGCAGAGTTACTGGAAATATTGGGAAGTATAATTAATGGATTTGCCTTACCACTAAAAGAAGAGCAC AAGATTTTCTTATTGAAGGTGTTACTACCTTTGCACAAAGTGAAATCTCTGAGTGTCTACCATCCCCAGCTGGCATACTGTGTAGTGCAG TTTTTAGAAAAGGACAGCACCCTCACGGAACCAGTGGTGATGGCACTTCTCAAATACTGGCCAAAGACTCACAGTCCAAAAGAAGTAATG TTCTTAAACGAATTAGAAGAGATTTTAGATGTCATTGAACCATCAGAATTTGTGAAGATCATGGAACCCCTCTTCCGGCAGTTGGCCAAA TGTGTCTCCAGCCCACACTTCCAGGTGGCAGAGCGAGCTCTCTATTACTGGAATAATGAATACATCATGAGTTTAATCAGTGACAACGCA GCGAAGATTCTGCCCATCATGTTTCCTTCCTTGTACCGCAACTCAAAGACCCATTGGAACAAGACAATACATGGCTTGATATACAACGCC CTGAAGCTCTTCATGGAGATGAACCAAAAGCTATTTGATGACTGTACACAACAGTTCAAAGCAGAGAAACTAAAAGAGAAGCTAAAAATG AAAGAACGGGAAGAAGCATGGGTTAAAATAGAAAATCTAGCCAAAGCCAATCCCCAGTACACAGTGTATAGTCAAGCCAGCACCATGAGC ATTCCGGTTGCAATGGAGACAGATGGGCCTTTATTTGAAGATGTGCAGATGCTGAGAAAGACAGTGAAGGACGAGGCTCATCAGGCACAG AAAGATCCGAAGAAGGACCGTCCTCTTGCACGCCGCAAGTCCGAGCTGCCTCAGGACCCCCACACCAAGAAAGCCTTGGAAGCTCACTGC >In-frame_RCOR1_ENST00000570597_chr14_103148315_+_PPP2R5C_ENST00000422945_chr14_102323023_+_1917nt ATGGTGGAGAAGGGCCCCGAGGTCTCAGGGAAGCGGAGAGGGAGGAACAACGCGGCCGCCTCCGCCTCCGCCGCCGCCGCCTCCGCCGCC GCCTCGGCCGCCTGCGCCTCGCCAGCCGCCACTGCCGCCTCGGGCGCCGCCGCCTCCTCAGCCTCGGCCGCCGCCGCCTCAGCCGCCGCC GCCCCCAATAATGGCCAGAATAAAAGTTTGGCGGCGGCGGCGCCCAATGGCAACAGCAGCAGCAACTCCTGGGAGGAAGGCAGCTCGGGC TCGTCCAGCGACGAGGAGCACGGTGGCGGTGGCATGAGGGTCGGACCCCAGTACCAGGCGGTGGTGCCCGACTTCGACCCCGCCAAACTG GCAAGACGCAGTCAAGAACGGGACAATCTTGGCATGTTGGTCTGGTCACCCAATCAAAATCTGTCAGAAGCAAAGTATGTTCCTCCTGCT GATCAAGAGAAGCTTTTTATCCAGAAGTTACGTCAGTGTTGCGTCCTCTTTGACTTTGTTTCTGATCCACTAAGTGACCTAAAGTGGAAG GAAGTAAAACGAGCTGCTTTAAGTGAAATGGTAGAATATATCACCCATAATCGGAATGTGATCACAGAGCCTATTTACCCAGAAGTAGTC CATATGTTTGCAGTTAACATGTTTCGAACATTACCACCTTCCTCCAATCCTACGGGAGCGGAATTTGACCCGGAGGAAGATGAACCAACG TTAGAAGCAGCCTGGCCTCATCTACAGCTTGTTTATGAATTTTTCTTAAGATTTTTAGAGTCTCCAGATTTCCAACCTAATATAGCGAAG AAATATATTGATCAGAAGTTTGTATTGCAGCTTTTAGAGCTCTTTGACAGTGAAGATCCTCGGGAGAGAGATTTTCTTAAAACCACCCTT CACAGAATCTATGGGAAATTCCTAGGCTTGAGAGCTTACATCAGAAAACAGATAAATAATATATTTTATAGGTTTATTTATGAAACAGAG CATCATAATGGCATAGCAGAGTTACTGGAAATATTGGGAAGTATAATTAATGGATTTGCCTTACCACTAAAAGAAGAGCACAAGATTTTC TTATTGAAGGTGTTACTACCTTTGCACAAAGTGAAATCTCTGAGTGTCTACCATCCCCAGCTGGCATACTGTGTAGTGCAGTTTTTAGAA AAGGACAGCACCCTCACGGAACCAGTGGTGATGGCACTTCTCAAATACTGGCCAAAGACTCACAGTCCAAAAGAAGTAATGTTCTTAAAC GAATTAGAAGAGATTTTAGATGTCATTGAACCATCAGAATTTGTGAAGATCATGGAACCCCTCTTCCGGCAGTTGGCCAAATGTGTCTCC AGCCCACACTTCCAGGTGGCAGAGCGAGCTCTCTATTACTGGAATAATGAATACATCATGAGTTTAATCAGTGACAACGCAGCGAAGATT CTGCCCATCATGTTTCCTTCCTTGTACCGCAACTCAAAGACCCATTGGAACAAGACAATACATGGCTTGATATACAACGCCCTGAAGCTC TTCATGGAGATGAACCAAAAGCTATTTGATGACTGTACACAACAGTTCAAAGCAGAGAAACTAAAAGAGAAGCTAAAAATGAAAGAACGG GAAGAAGCATGGGTTAAAATAGAAAATCTAGCCAAAGCCAATCCCCAGTACACAGTGTATAGTCAAGCCAGCACCATGAGCATTCCGGTT GCAATGGAGACAGATGGGCCTTTATTTGAAGATGTGCAGATGCTGAGAAAGACAGTGAAGGACGAGGCTCATCAGGCACAGAAAGATCCG AAGAAGGACCGTCCTCTTGCACGCCGCAAGTCCGAGCTGCCTCAGGACCCCCACACCAAGAAAGCCTTGGAAGCTCACTGCAGGGCCGAT >In-frame_RCOR1_ENST00000262241_chr14_103059662_+_PPP2R5C_ENST00000422945_chr14_102391478_+_493nt ATGCCGGCCATGGTGGAGAAGGGCCCCGAGGTCTCAGGGAAGCGGAGAGGGAGGAACAACGCGGCCGCCTCCGCCTCCGCCGCCGCCGCC TCCGCCGCCGCCTCGGCCGCCTGCGCCTCGCCAGCCGCCACTGCCGCCTCGGGCGCCGCCGCCTCCTCAGCCTCGGCCGCCGCCGCCTCA GCCGCCGCCGCCCCCAATAATGGCCAGAATAAAAGTTTGGCGGCGGCGGCGCCCAATGGCAACAGCAGCAGCAACTCCTGGGAGGAAGGC AGCTCGGGCTCGTCCAGCGACGAGGAGCACGGTGGCGGTGGCATGAGGGTCGGACCCCAGTACCAGGCGGTGGTGCCCGACTTCGACCCC GGCACAGAAAGATCCGAAGAAGGACCGTCCTCTTGCACGCCGCAAGTCCGAGCTGCCTCAGGACCCCCACACCAAGAAAGCCTTGGAAGC >In-frame_RCOR1_ENST00000570597_chr14_103059662_+_PPP2R5C_ENST00000422945_chr14_102391478_+_484nt ATGGTGGAGAAGGGCCCCGAGGTCTCAGGGAAGCGGAGAGGGAGGAACAACGCGGCCGCCTCCGCCTCCGCCGCCGCCGCCTCCGCCGCC GCCTCGGCCGCCTGCGCCTCGCCAGCCGCCACTGCCGCCTCGGGCGCCGCCGCCTCCTCAGCCTCGGCCGCCGCCGCCTCAGCCGCCGCC GCCCCCAATAATGGCCAGAATAAAAGTTTGGCGGCGGCGGCGCCCAATGGCAACAGCAGCAGCAACTCCTGGGAGGAAGGCAGCTCGGGC TCGTCCAGCGACGAGGAGCACGGTGGCGGTGGCATGAGGGTCGGACCCCAGTACCAGGCGGTGGTGCCCGACTTCGACCCCGGCACAGAA AGATCCGAAGAAGGACCGTCCTCTTGCACGCCGCAAGTCCGAGCTGCCTCAGGACCCCCACACCAAGAAAGCCTTGGAAGCTCACTGCAG |
* Fusion transcript sequences (Full-length transcript). |
>In-frame_RCOR1_ENST00000262241_chr14_103148315_+_PPP2R5C_ENST00000422945_chr14_102323023_+_4869nt GTGAGGGCGGCGATGAGAGCGAAAGTTGCGCTCGGCTCGTCGCTGGGGGCTTGAAGCGGCTCCGCGCTCTGCCCGTTTGGGCCTCCCCCG ACTCGGACTCGCGCCCGTGGGCTCCCGCCGCGCCCGCCCGGCCCCGCGCCGGCCCCGCGCCCCCTCCCCCGTCTCGGCGCCCCCTCCTCA GGAGCCGCGGGTCCCCGCCACTTTCGCACGGCCCCGGCCCCCGCCGATGCCGGCCATGGTGGAGAAGGGCCCCGAGGTCTCAGGGAAGCG GAGAGGGAGGAACAACGCGGCCGCCTCCGCCTCCGCCGCCGCCGCCTCCGCCGCCGCCTCGGCCGCCTGCGCCTCGCCAGCCGCCACTGC CGCCTCGGGCGCCGCCGCCTCCTCAGCCTCGGCCGCCGCCGCCTCAGCCGCCGCCGCCCCCAATAATGGCCAGAATAAAAGTTTGGCGGC GGCGGCGCCCAATGGCAACAGCAGCAGCAACTCCTGGGAGGAAGGCAGCTCGGGCTCGTCCAGCGACGAGGAGCACGGTGGCGGTGGCAT GAGGGTCGGACCCCAGTACCAGGCGGTGGTGCCCGACTTCGACCCCGCCAAACTGGCAAGACGCAGTCAAGAACGGGACAATCTTGGCAT GTTGGTCTGGTCACCCAATCAAAATCTGTCAGAAGCAAAGTATGTTCCTCCTGCTGATCAAGAGAAGCTTTTTATCCAGAAGTTACGTCA GTGTTGCGTCCTCTTTGACTTTGTTTCTGATCCACTAAGTGACCTAAAGTGGAAGGAAGTAAAACGAGCTGCTTTAAGTGAAATGGTAGA ATATATCACCCATAATCGGAATGTGATCACAGAGCCTATTTACCCAGAAGTAGTCCATATGTTTGCAGTTAACATGTTTCGAACATTACC ACCTTCCTCCAATCCTACGGGAGCGGAATTTGACCCGGAGGAAGATGAACCAACGTTAGAAGCAGCCTGGCCTCATCTACAGCTTGTTTA TGAATTTTTCTTAAGATTTTTAGAGTCTCCAGATTTCCAACCTAATATAGCGAAGAAATATATTGATCAGAAGTTTGTATTGCAGCTTTT AGAGCTCTTTGACAGTGAAGATCCTCGGGAGAGAGATTTTCTTAAAACCACCCTTCACAGAATCTATGGGAAATTCCTAGGCTTGAGAGC TTACATCAGAAAACAGATAAATAATATATTTTATAGGTTTATTTATGAAACAGAGCATCATAATGGCATAGCAGAGTTACTGGAAATATT GGGAAGTATAATTAATGGATTTGCCTTACCACTAAAAGAAGAGCACAAGATTTTCTTATTGAAGGTGTTACTACCTTTGCACAAAGTGAA ATCTCTGAGTGTCTACCATCCCCAGCTGGCATACTGTGTAGTGCAGTTTTTAGAAAAGGACAGCACCCTCACGGAACCAGTGGTGATGGC ACTTCTCAAATACTGGCCAAAGACTCACAGTCCAAAAGAAGTAATGTTCTTAAACGAATTAGAAGAGATTTTAGATGTCATTGAACCATC AGAATTTGTGAAGATCATGGAACCCCTCTTCCGGCAGTTGGCCAAATGTGTCTCCAGCCCACACTTCCAGGTGGCAGAGCGAGCTCTCTA TTACTGGAATAATGAATACATCATGAGTTTAATCAGTGACAACGCAGCGAAGATTCTGCCCATCATGTTTCCTTCCTTGTACCGCAACTC AAAGACCCATTGGAACAAGACAATACATGGCTTGATATACAACGCCCTGAAGCTCTTCATGGAGATGAACCAAAAGCTATTTGATGACTG TACACAACAGTTCAAAGCAGAGAAACTAAAAGAGAAGCTAAAAATGAAAGAACGGGAAGAAGCATGGGTTAAAATAGAAAATCTAGCCAA AGCCAATCCCCAGTACACAGTGTATAGTCAAGCCAGCACCATGAGCATTCCGGTTGCAATGGAGACAGATGGGCCTTTATTTGAAGATGT GCAGATGCTGAGAAAGACAGTGAAGGACGAGGCTCATCAGGCACAGAAAGATCCGAAGAAGGACCGTCCTCTTGCACGCCGCAAGTCCGA GCTGCCTCAGGACCCCCACACCAAGAAAGCCTTGGAAGCTCACTGCAGGGCCGATGAGCTGGCCTCCCAGGACGGCCGCTAGCCTCCGGG GCGCCGCGTCGGGGCCGGGCCCGCCAGTTCTTTTCCGGATTCTGTAGAAAATACATACTTCCTGTGCCATACCAATCAGTTACACTCAAA GCTTTCTTGGACCCCGTTCCGTAGGCAATAACGTGCGTCCGCCTCAGCGCGAGATTAGGAGTTCAAACAATGGTGACTTCCCAGAGCCCG CTGGCAGAGCCGCGGGTTGACGACGGTGTCCTCGCAGTGTCGCCGCCACCCCAGCGTAGTCCAAGTCAGACTATTTCACAAAGTCAGAGC GATAGGAAAGCACCCTGCCCTTCATCTTCATGTTCTCCCAAATGGAACTTAGGATCTTTTAACATAGGTGGTTCTGTGATAACATCAGTG TTTTCCAAATCAAAGGAACGCTTTAAAAAATAGGACCTATTTTTTAAGACTTTACAGCCTTTGAAATGGTTTCCACGTGATTGTTACGCC AGCAGTTCTCGTTTTGTTTGTTTTTCAATCTCAGTGAAATGGCTCTTTGCTTTCGAGTTCTCACGCAACGTACTGGGCAAATGACAATCC TCAGCCGCTGGTATTTTCTAAGGGGTCTCTTCACTTTGATGAGTGACATGAACACCGTGTCTCCTTCTCTTGTGTGTACCTAAAGCCATA TTTCCAAGTCTGTGGTACTCCAGGATTCCAGGAGTAAGCCTGTAGAAGAGATTTATTTTAAAAGAGATTGCTCTGAAATTTATCTTAAAA GAGCTTGCTCTGTCTACCTTGACAGAAATTGGAGTTTTAAAATTATGTGTTAATATTTTTATTTGCAGATTTCGTTTCCGTCAACTTAAA CATTGTTGCCCTTCAACAAGGCTCTTGAATTAATAAAATTATAGTCTCTAAGAATTCCACATTTTATGGAAAGTTAGAGCAAAATCATTT TGAGTTAAGCCAGTTCTTAGCCTAATGCAAACTGCAGCGCCTTTAAGCATAAAGTAACACAACAGCATTGCACGGGGCCGGCACTGCCGC TGCCTTCACTGAAGGCTGCAGTGCTGTTCTGAGAGCTTGGAGGAGGCACCAGCGAGGATGACGTTTAGTGGAGCTCTTTCTGTTGAAAAG AGCTCACGTTATCAACACCTTGTAAGGAAAATACAGTGTCTGAGTTTTCATCGGTCTTCACATGCTGCTATATATTCCACAGAGTTCCTT GCATGTACTGAGCTTTTGTTTTAGATGGAATAGCACAAGGAGAAAAATCTTTAAACTTAGTGCTTTGTCTATTCTTTATTTCTCTCAGGG TGGCCAGTATTTTGACTTATTTATCCTGCTTGAAAGCTACTTGAGATGTGTACTGCTATTCTAAACACGTGATCTAGTTTCTTTCATCTC TGGCATAAGATTATATAACTTAATGTTAAGTGTCTTGAGGCATAAAAGACAAAATGTGGCTTATTTTAGGATCTGTTTTTTCATCGAGGT CTCGGGTATCCTTTCAAAGATAGTGAGAAGCAGACACTGCTCCTTGTGCAGCTCTGGTACCTCCTGCCCACTGCTGTCACTTCAAGCCAC TGGCAATGCTTCTGTCCTCGTGTCTTGGAGGAAAATCACCTGGGGGGAGGGGACTTCTTGTGGTAAGAGCAAGTGCAGGTATGAAATGCG AAGATTGCCCCAGCTAAAAGTGGACAAGTCCGCTTTGTGAGATGAATACTTCCTGAGAAACTTGACAAGTATCTCTCCATTTTACCATTA TGAAAACTATCATTAAAAAAAACAGTTTAGATGCCTTCTCCTTTTGAGGGAAAAAGGGTGCTTTTTATTGTATAAAGCAGCGTCTTATGT ATTTTGATATACCATTGTTTGAACTTCCGTCTTTAGCTGATAGATTCTCAAATATCCTTGATTTTGGATGTTCAGTATGTTTGTGAGAGA GGTTTCTGGGAAGACTCTCTTTTTGCCCTCGGGAAAAAGCAAAATATCAATGTTTGGGTGACTGTGTAAAGCTCAGTGTGTAAGAACATC TTTTTGTCTAGGTTTTCTTTCTGCTCTTTATTGAAGACAAACACTCACCAAAAAGAAAAATAAAAGTTTTCAGAGAAACTAATTTTCTTT GGCAAGAGTATTACTTAATATTTTGGCCTCCTAAAGTTTCCCTAGTTAGTACTCGGACTCCTGTGCTAATTGTCAGCTTACATATCATTG TATAGAGACTGTTTATTCTGTACCAAACTGATTTCAAAAGTACTACATTGAAAATAAACCGGTGACTGTTTTTCTTCATAAAGTTCTGCG TTTGGCATCTTCACTCTTTCCAAAATGTATCTGTACATCAGAAATGTCACTATTCCAAGTGTCTTTTTAGTGTGGCTTTAGTATGGCTTC CTTTTAATATTGTACATACATTGTATCTTTGTTTTATGGTAATAAGTAATAAAAATGTAGACTTCATATTTTGTACAAAATGTCCTATGT ACAGAATAAAAAAGTTCATAGAAACAGCAAATATAGGTAAGTGGCACAATTATTTTTCTTTAGAAAATATCTGTAACTTTATGCATTAGT GAAATGTTAAGTACCGACATATTTTTTAACATTTTGTAATTCAAAACTTTTTGTTTTGACATTGTTTATGAAGAGAAACTTCATACACTT GCCATTTAATATGCTCTTTTATCTAATTTTCAAAAACTCTAAAAAACGGTGTATCATATGGACTAAATAAAGAACATGTGAATTTTATTG >In-frame_RCOR1_ENST00000570597_chr14_103148315_+_PPP2R5C_ENST00000422945_chr14_102323023_+_4634nt ATGGTGGAGAAGGGCCCCGAGGTCTCAGGGAAGCGGAGAGGGAGGAACAACGCGGCCGCCTCCGCCTCCGCCGCCGCCGCCTCCGCCGCC GCCTCGGCCGCCTGCGCCTCGCCAGCCGCCACTGCCGCCTCGGGCGCCGCCGCCTCCTCAGCCTCGGCCGCCGCCGCCTCAGCCGCCGCC GCCCCCAATAATGGCCAGAATAAAAGTTTGGCGGCGGCGGCGCCCAATGGCAACAGCAGCAGCAACTCCTGGGAGGAAGGCAGCTCGGGC TCGTCCAGCGACGAGGAGCACGGTGGCGGTGGCATGAGGGTCGGACCCCAGTACCAGGCGGTGGTGCCCGACTTCGACCCCGCCAAACTG GCAAGACGCAGTCAAGAACGGGACAATCTTGGCATGTTGGTCTGGTCACCCAATCAAAATCTGTCAGAAGCAAAGTATGTTCCTCCTGCT GATCAAGAGAAGCTTTTTATCCAGAAGTTACGTCAGTGTTGCGTCCTCTTTGACTTTGTTTCTGATCCACTAAGTGACCTAAAGTGGAAG GAAGTAAAACGAGCTGCTTTAAGTGAAATGGTAGAATATATCACCCATAATCGGAATGTGATCACAGAGCCTATTTACCCAGAAGTAGTC CATATGTTTGCAGTTAACATGTTTCGAACATTACCACCTTCCTCCAATCCTACGGGAGCGGAATTTGACCCGGAGGAAGATGAACCAACG TTAGAAGCAGCCTGGCCTCATCTACAGCTTGTTTATGAATTTTTCTTAAGATTTTTAGAGTCTCCAGATTTCCAACCTAATATAGCGAAG AAATATATTGATCAGAAGTTTGTATTGCAGCTTTTAGAGCTCTTTGACAGTGAAGATCCTCGGGAGAGAGATTTTCTTAAAACCACCCTT CACAGAATCTATGGGAAATTCCTAGGCTTGAGAGCTTACATCAGAAAACAGATAAATAATATATTTTATAGGTTTATTTATGAAACAGAG CATCATAATGGCATAGCAGAGTTACTGGAAATATTGGGAAGTATAATTAATGGATTTGCCTTACCACTAAAAGAAGAGCACAAGATTTTC TTATTGAAGGTGTTACTACCTTTGCACAAAGTGAAATCTCTGAGTGTCTACCATCCCCAGCTGGCATACTGTGTAGTGCAGTTTTTAGAA AAGGACAGCACCCTCACGGAACCAGTGGTGATGGCACTTCTCAAATACTGGCCAAAGACTCACAGTCCAAAAGAAGTAATGTTCTTAAAC GAATTAGAAGAGATTTTAGATGTCATTGAACCATCAGAATTTGTGAAGATCATGGAACCCCTCTTCCGGCAGTTGGCCAAATGTGTCTCC AGCCCACACTTCCAGGTGGCAGAGCGAGCTCTCTATTACTGGAATAATGAATACATCATGAGTTTAATCAGTGACAACGCAGCGAAGATT CTGCCCATCATGTTTCCTTCCTTGTACCGCAACTCAAAGACCCATTGGAACAAGACAATACATGGCTTGATATACAACGCCCTGAAGCTC TTCATGGAGATGAACCAAAAGCTATTTGATGACTGTACACAACAGTTCAAAGCAGAGAAACTAAAAGAGAAGCTAAAAATGAAAGAACGG GAAGAAGCATGGGTTAAAATAGAAAATCTAGCCAAAGCCAATCCCCAGTACACAGTGTATAGTCAAGCCAGCACCATGAGCATTCCGGTT GCAATGGAGACAGATGGGCCTTTATTTGAAGATGTGCAGATGCTGAGAAAGACAGTGAAGGACGAGGCTCATCAGGCACAGAAAGATCCG AAGAAGGACCGTCCTCTTGCACGCCGCAAGTCCGAGCTGCCTCAGGACCCCCACACCAAGAAAGCCTTGGAAGCTCACTGCAGGGCCGAT GAGCTGGCCTCCCAGGACGGCCGCTAGCCTCCGGGGCGCCGCGTCGGGGCCGGGCCCGCCAGTTCTTTTCCGGATTCTGTAGAAAATACA TACTTCCTGTGCCATACCAATCAGTTACACTCAAAGCTTTCTTGGACCCCGTTCCGTAGGCAATAACGTGCGTCCGCCTCAGCGCGAGAT TAGGAGTTCAAACAATGGTGACTTCCCAGAGCCCGCTGGCAGAGCCGCGGGTTGACGACGGTGTCCTCGCAGTGTCGCCGCCACCCCAGC GTAGTCCAAGTCAGACTATTTCACAAAGTCAGAGCGATAGGAAAGCACCCTGCCCTTCATCTTCATGTTCTCCCAAATGGAACTTAGGAT CTTTTAACATAGGTGGTTCTGTGATAACATCAGTGTTTTCCAAATCAAAGGAACGCTTTAAAAAATAGGACCTATTTTTTAAGACTTTAC AGCCTTTGAAATGGTTTCCACGTGATTGTTACGCCAGCAGTTCTCGTTTTGTTTGTTTTTCAATCTCAGTGAAATGGCTCTTTGCTTTCG AGTTCTCACGCAACGTACTGGGCAAATGACAATCCTCAGCCGCTGGTATTTTCTAAGGGGTCTCTTCACTTTGATGAGTGACATGAACAC CGTGTCTCCTTCTCTTGTGTGTACCTAAAGCCATATTTCCAAGTCTGTGGTACTCCAGGATTCCAGGAGTAAGCCTGTAGAAGAGATTTA TTTTAAAAGAGATTGCTCTGAAATTTATCTTAAAAGAGCTTGCTCTGTCTACCTTGACAGAAATTGGAGTTTTAAAATTATGTGTTAATA TTTTTATTTGCAGATTTCGTTTCCGTCAACTTAAACATTGTTGCCCTTCAACAAGGCTCTTGAATTAATAAAATTATAGTCTCTAAGAAT TCCACATTTTATGGAAAGTTAGAGCAAAATCATTTTGAGTTAAGCCAGTTCTTAGCCTAATGCAAACTGCAGCGCCTTTAAGCATAAAGT AACACAACAGCATTGCACGGGGCCGGCACTGCCGCTGCCTTCACTGAAGGCTGCAGTGCTGTTCTGAGAGCTTGGAGGAGGCACCAGCGA GGATGACGTTTAGTGGAGCTCTTTCTGTTGAAAAGAGCTCACGTTATCAACACCTTGTAAGGAAAATACAGTGTCTGAGTTTTCATCGGT CTTCACATGCTGCTATATATTCCACAGAGTTCCTTGCATGTACTGAGCTTTTGTTTTAGATGGAATAGCACAAGGAGAAAAATCTTTAAA CTTAGTGCTTTGTCTATTCTTTATTTCTCTCAGGGTGGCCAGTATTTTGACTTATTTATCCTGCTTGAAAGCTACTTGAGATGTGTACTG CTATTCTAAACACGTGATCTAGTTTCTTTCATCTCTGGCATAAGATTATATAACTTAATGTTAAGTGTCTTGAGGCATAAAAGACAAAAT GTGGCTTATTTTAGGATCTGTTTTTTCATCGAGGTCTCGGGTATCCTTTCAAAGATAGTGAGAAGCAGACACTGCTCCTTGTGCAGCTCT GGTACCTCCTGCCCACTGCTGTCACTTCAAGCCACTGGCAATGCTTCTGTCCTCGTGTCTTGGAGGAAAATCACCTGGGGGGAGGGGACT TCTTGTGGTAAGAGCAAGTGCAGGTATGAAATGCGAAGATTGCCCCAGCTAAAAGTGGACAAGTCCGCTTTGTGAGATGAATACTTCCTG AGAAACTTGACAAGTATCTCTCCATTTTACCATTATGAAAACTATCATTAAAAAAAACAGTTTAGATGCCTTCTCCTTTTGAGGGAAAAA GGGTGCTTTTTATTGTATAAAGCAGCGTCTTATGTATTTTGATATACCATTGTTTGAACTTCCGTCTTTAGCTGATAGATTCTCAAATAT CCTTGATTTTGGATGTTCAGTATGTTTGTGAGAGAGGTTTCTGGGAAGACTCTCTTTTTGCCCTCGGGAAAAAGCAAAATATCAATGTTT GGGTGACTGTGTAAAGCTCAGTGTGTAAGAACATCTTTTTGTCTAGGTTTTCTTTCTGCTCTTTATTGAAGACAAACACTCACCAAAAAG AAAAATAAAAGTTTTCAGAGAAACTAATTTTCTTTGGCAAGAGTATTACTTAATATTTTGGCCTCCTAAAGTTTCCCTAGTTAGTACTCG GACTCCTGTGCTAATTGTCAGCTTACATATCATTGTATAGAGACTGTTTATTCTGTACCAAACTGATTTCAAAAGTACTACATTGAAAAT AAACCGGTGACTGTTTTTCTTCATAAAGTTCTGCGTTTGGCATCTTCACTCTTTCCAAAATGTATCTGTACATCAGAAATGTCACTATTC CAAGTGTCTTTTTAGTGTGGCTTTAGTATGGCTTCCTTTTAATATTGTACATACATTGTATCTTTGTTTTATGGTAATAAGTAATAAAAA TGTAGACTTCATATTTTGTACAAAATGTCCTATGTACAGAATAAAAAAGTTCATAGAAACAGCAAATATAGGTAAGTGGCACAATTATTT TTCTTTAGAAAATATCTGTAACTTTATGCATTAGTGAAATGTTAAGTACCGACATATTTTTTAACATTTTGTAATTCAAAACTTTTTGTT TTGACATTGTTTATGAAGAGAAACTTCATACACTTGCCATTTAATATGCTCTTTTATCTAATTTTCAAAAACTCTAAAAAACGGTGTATC >In-frame_RCOR1_ENST00000262241_chr14_103059662_+_PPP2R5C_ENST00000422945_chr14_102391478_+_3436nt GTGAGGGCGGCGATGAGAGCGAAAGTTGCGCTCGGCTCGTCGCTGGGGGCTTGAAGCGGCTCCGCGCTCTGCCCGTTTGGGCCTCCCCCG ACTCGGACTCGCGCCCGTGGGCTCCCGCCGCGCCCGCCCGGCCCCGCGCCGGCCCCGCGCCCCCTCCCCCGTCTCGGCGCCCCCTCCTCA GGAGCCGCGGGTCCCCGCCACTTTCGCACGGCCCCGGCCCCCGCCGATGCCGGCCATGGTGGAGAAGGGCCCCGAGGTCTCAGGGAAGCG GAGAGGGAGGAACAACGCGGCCGCCTCCGCCTCCGCCGCCGCCGCCTCCGCCGCCGCCTCGGCCGCCTGCGCCTCGCCAGCCGCCACTGC CGCCTCGGGCGCCGCCGCCTCCTCAGCCTCGGCCGCCGCCGCCTCAGCCGCCGCCGCCCCCAATAATGGCCAGAATAAAAGTTTGGCGGC GGCGGCGCCCAATGGCAACAGCAGCAGCAACTCCTGGGAGGAAGGCAGCTCGGGCTCGTCCAGCGACGAGGAGCACGGTGGCGGTGGCAT GAGGGTCGGACCCCAGTACCAGGCGGTGGTGCCCGACTTCGACCCCGGCACAGAAAGATCCGAAGAAGGACCGTCCTCTTGCACGCCGCA AGTCCGAGCTGCCTCAGGACCCCCACACCAAGAAAGCCTTGGAAGCTCACTGCAGGGCCGATGAGCTGGCCTCCCAGGACGGCCGCTAGC CTCCGGGGCGCCGCGTCGGGGCCGGGCCCGCCAGTTCTTTTCCGGATTCTGTAGAAAATACATACTTCCTGTGCCATACCAATCAGTTAC ACTCAAAGCTTTCTTGGACCCCGTTCCGTAGGCAATAACGTGCGTCCGCCTCAGCGCGAGATTAGGAGTTCAAACAATGGTGACTTCCCA GAGCCCGCTGGCAGAGCCGCGGGTTGACGACGGTGTCCTCGCAGTGTCGCCGCCACCCCAGCGTAGTCCAAGTCAGACTATTTCACAAAG TCAGAGCGATAGGAAAGCACCCTGCCCTTCATCTTCATGTTCTCCCAAATGGAACTTAGGATCTTTTAACATAGGTGGTTCTGTGATAAC ATCAGTGTTTTCCAAATCAAAGGAACGCTTTAAAAAATAGGACCTATTTTTTAAGACTTTACAGCCTTTGAAATGGTTTCCACGTGATTG TTACGCCAGCAGTTCTCGTTTTGTTTGTTTTTCAATCTCAGTGAAATGGCTCTTTGCTTTCGAGTTCTCACGCAACGTACTGGGCAAATG ACAATCCTCAGCCGCTGGTATTTTCTAAGGGGTCTCTTCACTTTGATGAGTGACATGAACACCGTGTCTCCTTCTCTTGTGTGTACCTAA AGCCATATTTCCAAGTCTGTGGTACTCCAGGATTCCAGGAGTAAGCCTGTAGAAGAGATTTATTTTAAAAGAGATTGCTCTGAAATTTAT CTTAAAAGAGCTTGCTCTGTCTACCTTGACAGAAATTGGAGTTTTAAAATTATGTGTTAATATTTTTATTTGCAGATTTCGTTTCCGTCA ACTTAAACATTGTTGCCCTTCAACAAGGCTCTTGAATTAATAAAATTATAGTCTCTAAGAATTCCACATTTTATGGAAAGTTAGAGCAAA ATCATTTTGAGTTAAGCCAGTTCTTAGCCTAATGCAAACTGCAGCGCCTTTAAGCATAAAGTAACACAACAGCATTGCACGGGGCCGGCA CTGCCGCTGCCTTCACTGAAGGCTGCAGTGCTGTTCTGAGAGCTTGGAGGAGGCACCAGCGAGGATGACGTTTAGTGGAGCTCTTTCTGT TGAAAAGAGCTCACGTTATCAACACCTTGTAAGGAAAATACAGTGTCTGAGTTTTCATCGGTCTTCACATGCTGCTATATATTCCACAGA GTTCCTTGCATGTACTGAGCTTTTGTTTTAGATGGAATAGCACAAGGAGAAAAATCTTTAAACTTAGTGCTTTGTCTATTCTTTATTTCT CTCAGGGTGGCCAGTATTTTGACTTATTTATCCTGCTTGAAAGCTACTTGAGATGTGTACTGCTATTCTAAACACGTGATCTAGTTTCTT TCATCTCTGGCATAAGATTATATAACTTAATGTTAAGTGTCTTGAGGCATAAAAGACAAAATGTGGCTTATTTTAGGATCTGTTTTTTCA TCGAGGTCTCGGGTATCCTTTCAAAGATAGTGAGAAGCAGACACTGCTCCTTGTGCAGCTCTGGTACCTCCTGCCCACTGCTGTCACTTC AAGCCACTGGCAATGCTTCTGTCCTCGTGTCTTGGAGGAAAATCACCTGGGGGGAGGGGACTTCTTGTGGTAAGAGCAAGTGCAGGTATG AAATGCGAAGATTGCCCCAGCTAAAAGTGGACAAGTCCGCTTTGTGAGATGAATACTTCCTGAGAAACTTGACAAGTATCTCTCCATTTT ACCATTATGAAAACTATCATTAAAAAAAACAGTTTAGATGCCTTCTCCTTTTGAGGGAAAAAGGGTGCTTTTTATTGTATAAAGCAGCGT CTTATGTATTTTGATATACCATTGTTTGAACTTCCGTCTTTAGCTGATAGATTCTCAAATATCCTTGATTTTGGATGTTCAGTATGTTTG TGAGAGAGGTTTCTGGGAAGACTCTCTTTTTGCCCTCGGGAAAAAGCAAAATATCAATGTTTGGGTGACTGTGTAAAGCTCAGTGTGTAA GAACATCTTTTTGTCTAGGTTTTCTTTCTGCTCTTTATTGAAGACAAACACTCACCAAAAAGAAAAATAAAAGTTTTCAGAGAAACTAAT TTTCTTTGGCAAGAGTATTACTTAATATTTTGGCCTCCTAAAGTTTCCCTAGTTAGTACTCGGACTCCTGTGCTAATTGTCAGCTTACAT ATCATTGTATAGAGACTGTTTATTCTGTACCAAACTGATTTCAAAAGTACTACATTGAAAATAAACCGGTGACTGTTTTTCTTCATAAAG TTCTGCGTTTGGCATCTTCACTCTTTCCAAAATGTATCTGTACATCAGAAATGTCACTATTCCAAGTGTCTTTTTAGTGTGGCTTTAGTA TGGCTTCCTTTTAATATTGTACATACATTGTATCTTTGTTTTATGGTAATAAGTAATAAAAATGTAGACTTCATATTTTGTACAAAATGT CCTATGTACAGAATAAAAAAGTTCATAGAAACAGCAAATATAGGTAAGTGGCACAATTATTTTTCTTTAGAAAATATCTGTAACTTTATG CATTAGTGAAATGTTAAGTACCGACATATTTTTTAACATTTTGTAATTCAAAACTTTTTGTTTTGACATTGTTTATGAAGAGAAACTTCA TACACTTGCCATTTAATATGCTCTTTTATCTAATTTTCAAAAACTCTAAAAAACGGTGTATCATATGGACTAAATAAAGAACATGTGAAT >In-frame_RCOR1_ENST00000570597_chr14_103059662_+_PPP2R5C_ENST00000422945_chr14_102391478_+_3201nt ATGGTGGAGAAGGGCCCCGAGGTCTCAGGGAAGCGGAGAGGGAGGAACAACGCGGCCGCCTCCGCCTCCGCCGCCGCCGCCTCCGCCGCC GCCTCGGCCGCCTGCGCCTCGCCAGCCGCCACTGCCGCCTCGGGCGCCGCCGCCTCCTCAGCCTCGGCCGCCGCCGCCTCAGCCGCCGCC GCCCCCAATAATGGCCAGAATAAAAGTTTGGCGGCGGCGGCGCCCAATGGCAACAGCAGCAGCAACTCCTGGGAGGAAGGCAGCTCGGGC TCGTCCAGCGACGAGGAGCACGGTGGCGGTGGCATGAGGGTCGGACCCCAGTACCAGGCGGTGGTGCCCGACTTCGACCCCGGCACAGAA AGATCCGAAGAAGGACCGTCCTCTTGCACGCCGCAAGTCCGAGCTGCCTCAGGACCCCCACACCAAGAAAGCCTTGGAAGCTCACTGCAG GGCCGATGAGCTGGCCTCCCAGGACGGCCGCTAGCCTCCGGGGCGCCGCGTCGGGGCCGGGCCCGCCAGTTCTTTTCCGGATTCTGTAGA AAATACATACTTCCTGTGCCATACCAATCAGTTACACTCAAAGCTTTCTTGGACCCCGTTCCGTAGGCAATAACGTGCGTCCGCCTCAGC GCGAGATTAGGAGTTCAAACAATGGTGACTTCCCAGAGCCCGCTGGCAGAGCCGCGGGTTGACGACGGTGTCCTCGCAGTGTCGCCGCCA CCCCAGCGTAGTCCAAGTCAGACTATTTCACAAAGTCAGAGCGATAGGAAAGCACCCTGCCCTTCATCTTCATGTTCTCCCAAATGGAAC TTAGGATCTTTTAACATAGGTGGTTCTGTGATAACATCAGTGTTTTCCAAATCAAAGGAACGCTTTAAAAAATAGGACCTATTTTTTAAG ACTTTACAGCCTTTGAAATGGTTTCCACGTGATTGTTACGCCAGCAGTTCTCGTTTTGTTTGTTTTTCAATCTCAGTGAAATGGCTCTTT GCTTTCGAGTTCTCACGCAACGTACTGGGCAAATGACAATCCTCAGCCGCTGGTATTTTCTAAGGGGTCTCTTCACTTTGATGAGTGACA TGAACACCGTGTCTCCTTCTCTTGTGTGTACCTAAAGCCATATTTCCAAGTCTGTGGTACTCCAGGATTCCAGGAGTAAGCCTGTAGAAG AGATTTATTTTAAAAGAGATTGCTCTGAAATTTATCTTAAAAGAGCTTGCTCTGTCTACCTTGACAGAAATTGGAGTTTTAAAATTATGT GTTAATATTTTTATTTGCAGATTTCGTTTCCGTCAACTTAAACATTGTTGCCCTTCAACAAGGCTCTTGAATTAATAAAATTATAGTCTC TAAGAATTCCACATTTTATGGAAAGTTAGAGCAAAATCATTTTGAGTTAAGCCAGTTCTTAGCCTAATGCAAACTGCAGCGCCTTTAAGC ATAAAGTAACACAACAGCATTGCACGGGGCCGGCACTGCCGCTGCCTTCACTGAAGGCTGCAGTGCTGTTCTGAGAGCTTGGAGGAGGCA CCAGCGAGGATGACGTTTAGTGGAGCTCTTTCTGTTGAAAAGAGCTCACGTTATCAACACCTTGTAAGGAAAATACAGTGTCTGAGTTTT CATCGGTCTTCACATGCTGCTATATATTCCACAGAGTTCCTTGCATGTACTGAGCTTTTGTTTTAGATGGAATAGCACAAGGAGAAAAAT CTTTAAACTTAGTGCTTTGTCTATTCTTTATTTCTCTCAGGGTGGCCAGTATTTTGACTTATTTATCCTGCTTGAAAGCTACTTGAGATG TGTACTGCTATTCTAAACACGTGATCTAGTTTCTTTCATCTCTGGCATAAGATTATATAACTTAATGTTAAGTGTCTTGAGGCATAAAAG ACAAAATGTGGCTTATTTTAGGATCTGTTTTTTCATCGAGGTCTCGGGTATCCTTTCAAAGATAGTGAGAAGCAGACACTGCTCCTTGTG CAGCTCTGGTACCTCCTGCCCACTGCTGTCACTTCAAGCCACTGGCAATGCTTCTGTCCTCGTGTCTTGGAGGAAAATCACCTGGGGGGA GGGGACTTCTTGTGGTAAGAGCAAGTGCAGGTATGAAATGCGAAGATTGCCCCAGCTAAAAGTGGACAAGTCCGCTTTGTGAGATGAATA CTTCCTGAGAAACTTGACAAGTATCTCTCCATTTTACCATTATGAAAACTATCATTAAAAAAAACAGTTTAGATGCCTTCTCCTTTTGAG GGAAAAAGGGTGCTTTTTATTGTATAAAGCAGCGTCTTATGTATTTTGATATACCATTGTTTGAACTTCCGTCTTTAGCTGATAGATTCT CAAATATCCTTGATTTTGGATGTTCAGTATGTTTGTGAGAGAGGTTTCTGGGAAGACTCTCTTTTTGCCCTCGGGAAAAAGCAAAATATC AATGTTTGGGTGACTGTGTAAAGCTCAGTGTGTAAGAACATCTTTTTGTCTAGGTTTTCTTTCTGCTCTTTATTGAAGACAAACACTCAC CAAAAAGAAAAATAAAAGTTTTCAGAGAAACTAATTTTCTTTGGCAAGAGTATTACTTAATATTTTGGCCTCCTAAAGTTTCCCTAGTTA GTACTCGGACTCCTGTGCTAATTGTCAGCTTACATATCATTGTATAGAGACTGTTTATTCTGTACCAAACTGATTTCAAAAGTACTACAT TGAAAATAAACCGGTGACTGTTTTTCTTCATAAAGTTCTGCGTTTGGCATCTTCACTCTTTCCAAAATGTATCTGTACATCAGAAATGTC ACTATTCCAAGTGTCTTTTTAGTGTGGCTTTAGTATGGCTTCCTTTTAATATTGTACATACATTGTATCTTTGTTTTATGGTAATAAGTA ATAAAAATGTAGACTTCATATTTTGTACAAAATGTCCTATGTACAGAATAAAAAAGTTCATAGAAACAGCAAATATAGGTAAGTGGCACA ATTATTTTTCTTTAGAAAATATCTGTAACTTTATGCATTAGTGAAATGTTAAGTACCGACATATTTTTTAACATTTTGTAATTCAAAACT TTTTGTTTTGACATTGTTTATGAAGAGAAACTTCATACACTTGCCATTTAATATGCTCTTTTATCTAATTTTCAAAAACTCTAAAAAACG 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FusionGenePPI for RCOR1_PPP2R5C |
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Hgene | Hgene's interactors | Tgene | Tgene's interactors |
RCOR1 | HDAC1, KDM1A, HMG20B, PHF21A, HDAC2, ZNF217, REST, MECP2, ZMYM2, CTBP1, KDM5B, CTBP2, HSPA4, SUMO2, ESCO2, SMARCE1, SMARCA4, SMARCC2, HIST1H3A, NR2E1, EMD, SERPINH1, SNAI1, MED12, MED28, TRIP4, OBFC1, BCL3, SUB1, GFI1B, GFI1, TAL1, HIST3H3, RCOR1, TCF3, NR2C1, TP53BP1, MTA3, NPM1, HDAC3, ECE2, FGF1, DOK4, ARRDC1, DDX46, MED23, B9D2, CEP135, NINL, SCLT1, HMG20A, FBXW7, NFATC2, DCAF12L2, ZSCAN5A, LLGL2, NR3C1, AR, PKN3, NCKAP5L, TFPT, CCHCR1, YEATS4, TUFT1, RABGAP1L, GOLGA5, CLOCK, PSMD9, VPS53, DZIP3, GRIPAP1, CCDC132, CCDC93, OIP5, PTRF, PHLDB3, HAUS6, RPRD1A, ARNTL, MAX, GIT2, RABGEF1, NUF2, THAP11, VPS51, TSSC1, RABEP1, TRIM25, UHRF2 | PPP2R5C | CCNG2, PPP2CA, PPP2R5A, PPP2R1A, PPP2R1B, PPP2CB, CHEK2, MBP, TBC1D3, APP, BRCA1, PAXIP1, IER3, MAPK1, SOX2, COL4A3BP, FAF1, JMJD6, PACSIN2, UGP2, PSMG3, SWAP70, EGFR, EP300, FAM43A, CCNG1, API5, LSM6, LSM7, PPP2R2A, POLD1, PPP2R5E, RQCD1, TP53, PRR14, PPP1CA, PPP1CB, PPP1CC, TRIM25 |
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Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Still interaction with |
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Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Interaction lost with |
Hgene | RCOR1 | chr14:103059662 | chr14:102391478 | ENST00000570597 | + | 2 | 12 | 78_257 | 117 | 483 | HDAC1 |
Hgene | RCOR1 | chr14:103148315 | chr14:102323023 | ENST00000570597 | + | 3 | 12 | 78_257 | 145 | 483 | HDAC1 |
Hgene | RCOR1 | chr14:103059662 | chr14:102391478 | ENST00000570597 | + | 2 | 12 | 296_384 | 117 | 483 | KDM1A |
Hgene | RCOR1 | chr14:103148315 | chr14:102323023 | ENST00000570597 | + | 3 | 12 | 296_384 | 145 | 483 | KDM1A |
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Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Interaction lost with |
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RelatedDrugs for RCOR1_PPP2R5C |
![]() (DrugBank Version 5.1.0 2018-04-02) |
Partner | Gene | UniProtAcc | DrugBank ID | Drug name | Drug activity | Drug type | Drug status |
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RelatedDiseases for RCOR1_PPP2R5C |
![]() (DisGeNet 4.0) |
Partner | Gene | Disease ID | Disease name | # pubmeds | Source |
Hgene | RCOR1 | C0009375 | Colonic Neoplasms | 1 | CTD_human |
Tgene | PPP2R5C | C0023434 | Chronic Lymphocytic Leukemia | 1 | CTD_human |
Tgene | PPP2R5C | C1257806 | Chromosomal Instability | 1 | CTD_human |
Tgene | PPP2R5C | C1449861 | Micronuclei, Chromosome-Defective | 1 | CTD_human |