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Fusion gene ID: 30755 |
FusionGeneSummary for RBM39_WFDC13 |
 Fusion gene summary |
| Fusion gene information | Fusion gene name: RBM39_WFDC13 | Fusion gene ID: 30755 | Hgene | Tgene | Gene symbol | RBM39 | WFDC13 | Gene ID | 9584 | 164237 |
| Gene name | RNA binding motif protein 39 | WAP four-disulfide core domain 13 | |
| Synonyms | CAPER|CAPERalpha|FSAP59|HCC1|RNPC2 | C20orf138|WAP13|dJ601O1.3 | |
| Cytomap | 20q11.22 | 20q13.12 | |
| Type of gene | protein-coding | protein-coding | |
| Description | RNA-binding protein 39CAPER alphaRNA-binding region (RNP1, RRM) containing 2coactivator of activating protein-1 and estrogen receptorsfunctional spliceosome-associated protein 59hepatocellular carcinoma protein 1splicing factor HCC1 | WAP four-disulfide core domain protein 13protease inhibitor WAP13protein WFDC13 | |
| Modification date | 20180519 | 20180329 | |
| UniProtAcc | Q14498 | Q8IUB5 | |
| Ensembl transtripts involved in fusion gene | ENST00000253363, ENST00000361162, ENST00000528062, ENST00000407261, ENST00000397370, ENST00000463098, | ENST00000305479, | |
| Fusion gene scores | * DoF score | 13 X 11 X 8=1144 | 2 X 1 X 2=4 |
| # samples | 15 | 2 | |
| ** MAII score | log2(15/1144*10)=-2.93105264628251 possibly effective Gene in Pan-Cancer Fusion Genes (peGinPCFGs). DoF>8 and MAII<0 | log2(2/4*10)=2.32192809488736 | |
| Context | PubMed: RBM39 [Title/Abstract] AND WFDC13 [Title/Abstract] AND fusion [Title/Abstract] | ||
| Functional or gene categories assigned by FusionGDB annotation | |||
| * DoF score (Degree of Frequency) = # partners X # break points X # cancer types ** MAII score (Major Active Isofusion Index) = log2(# samples/DoF score*10) |
| Gene ontology of each fusion partner gene with evidence of Inferred from Direct Assay (IDA) from Entrez |
| Partner | Gene | GO ID | GO term | PubMed ID |
| Fusion gene information from three resources (ChiTars (NAR, 2018), tumorfusions (NAR, 2018), Gao et al. (Cell, 2018)) * All genome coordinats were lifted-over on hg19. * Click on the break point to see the gene structure around the break point region using the UCSC Genome Browser. |
| Data type | Source | Cancer type | Sample | Hgene | Hchr | Hbp | Hstrand | Tgene | Tchr | Tbp | Tstrand |
| TCGA | RV | PRAD | TCGA-EJ-5514-01A | RBM39 | chr20 | 34300941 | - | WFDC13 | chr20 | 44333083 | + |
| * LD: Li Ding group's fusion gene list RV: Roel Verhaak group's fusion gene list ChiTaRs fusion database |
| Open reading frame (ORF) analsis of fusion genes based on Ensembl gene isoform structure. * Click on the break point to see the gene structure around the break point region using the UCSC Genome Browser. |
| ORF | Henst | Tenst | Hgene | Hchr | Hbp | Hstrand | Tgene | Tchr | Tbp | Tstrand |
| In-frame | ENST00000253363 | ENST00000305479 | RBM39 | chr20 | 34300941 | - | WFDC13 | chr20 | 44333083 | + |
| In-frame | ENST00000361162 | ENST00000305479 | RBM39 | chr20 | 34300941 | - | WFDC13 | chr20 | 44333083 | + |
| In-frame | ENST00000528062 | ENST00000305479 | RBM39 | chr20 | 34300941 | - | WFDC13 | chr20 | 44333083 | + |
| In-frame | ENST00000407261 | ENST00000305479 | RBM39 | chr20 | 34300941 | - | WFDC13 | chr20 | 44333083 | + |
| intron-3CDS | ENST00000397370 | ENST00000305479 | RBM39 | chr20 | 34300941 | - | WFDC13 | chr20 | 44333083 | + |
| intron-3CDS | ENST00000463098 | ENST00000305479 | RBM39 | chr20 | 34300941 | - | WFDC13 | chr20 | 44333083 | + |
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FusionProtFeatures for RBM39_WFDC13 |
| Main function of each fusion partner protein. (from UniProt) |
| Hgene | Tgene |
| RBM39 | WFDC13 |
| Transcriptional coactivator for steroid nuclearreceptors ESR1/ER-alpha and ESR2/ER-beta, and JUN/AP-1 (Bysimilarity). May be involved in pre-mRNA splicing process.{ECO:0000250}. | Putative acid-stable proteinase inhibitor.{ECO:0000250}. |
| Retention analysis result of each fusion partner protein across 39 protein features of UniProt such as six molecule processing features, 13 region features, four site features, six amino acid modification features, two natural variation features, five experimental info features, and 3 secondary structure features. Here, because of limited space for viewing, we only show the protein feature retention information belong to the 13 regional features. All retention annotation result can be downloaded at . * Minus value of BPloci means that the break pointn is located before the CDS. |
| - In-frame and retained protein feature among the 13 regional features. |
| Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Protein feature | Protein feature note |
| Hgene | RBM39 | chr20:34300941 | chr20:44333083 | ENST00000253363 | - | 12 | 17 | 41_90 | 391 | 531 | Compositional bias | Note=Arg/Ser-rich (RS domain) |
| Hgene | RBM39 | chr20:34300941 | chr20:44333083 | ENST00000361162 | - | 12 | 17 | 41_90 | 391 | 525 | Compositional bias | Note=Arg/Ser-rich (RS domain) |
| Hgene | RBM39 | chr20:34300941 | chr20:44333083 | ENST00000528062 | - | 11 | 16 | 41_90 | 369 | 509 | Compositional bias | Note=Arg/Ser-rich (RS domain) |
| Hgene | RBM39 | chr20:34300941 | chr20:44333083 | ENST00000253363 | - | 12 | 17 | 153_230 | 391 | 531 | Domain | RRM 1 |
| Hgene | RBM39 | chr20:34300941 | chr20:44333083 | ENST00000253363 | - | 12 | 17 | 250_328 | 391 | 531 | Domain | RRM 2 |
| Hgene | RBM39 | chr20:34300941 | chr20:44333083 | ENST00000361162 | - | 12 | 17 | 153_230 | 391 | 525 | Domain | RRM 1 |
| Hgene | RBM39 | chr20:34300941 | chr20:44333083 | ENST00000361162 | - | 12 | 17 | 250_328 | 391 | 525 | Domain | RRM 2 |
| Hgene | RBM39 | chr20:34300941 | chr20:44333083 | ENST00000528062 | - | 11 | 16 | 153_230 | 369 | 509 | Domain | RRM 1 |
| Hgene | RBM39 | chr20:34300941 | chr20:44333083 | ENST00000528062 | - | 11 | 16 | 250_328 | 369 | 509 | Domain | RRM 2 |
| Hgene | RBM39 | chr20:34300941 | chr20:44333083 | ENST00000253363 | - | 12 | 17 | 291_355 | 391 | 531 | Region | Activating domain |
| Hgene | RBM39 | chr20:34300941 | chr20:44333083 | ENST00000361162 | - | 12 | 17 | 291_355 | 391 | 525 | Region | Activating domain |
| Hgene | RBM39 | chr20:34300941 | chr20:44333083 | ENST00000528062 | - | 11 | 16 | 291_355 | 369 | 509 | Region | Activating domain |
| - In-frame and not-retained protein feature among the 13 regional features. |
| Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Protein feature | Protein feature note |
| Hgene | >RBM39 | chr20:34300941 | chr20:44333083 | ENST00000253363 | - | 12 | 17 | 409_416 | 391 | 531 | Compositional bias | Note=Poly-Ala |
| Hgene | >RBM39 | chr20:34300941 | chr20:44333083 | ENST00000361162 | - | 12 | 17 | 409_416 | 391 | 525 | Compositional bias | Note=Poly-Ala |
| Hgene | >RBM39 | chr20:34300941 | chr20:44333083 | ENST00000528062 | - | 11 | 16 | 409_416 | 369 | 509 | Compositional bias | Note=Poly-Ala |
| Hgene | >RBM39 | chr20:34300941 | chr20:44333083 | ENST00000253363 | - | 12 | 17 | 445_508 | 391 | 531 | Domain | RRM 3 |
| Hgene | >RBM39 | chr20:34300941 | chr20:44333083 | ENST00000361162 | - | 12 | 17 | 445_508 | 391 | 525 | Domain | RRM 3 |
| Hgene | >RBM39 | chr20:34300941 | chr20:44333083 | ENST00000528062 | - | 11 | 16 | 445_508 | 369 | 509 | Domain | RRM 3 |
| Tgene | WFDC13 | chr20:34300941 | chr20:44333083 | ENST00000305479 | + | 0 | 4 | 24_73 | 29 | 348 | Domain | Note=WAP%3B atypical |
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FusionGeneSequence for RBM39_WFDC13 |
| For in-frame fusion transcripts, we provide the fusion transcript sequences and fusion amino acid sequences. (nt: nucleotides, aa: amino acids) |
| * Fusion amino acid sequences. |
| >In-frame_RBM39_ENST00000253363_chr20_34300941_-_WFDC13_ENST00000305479_chr20_44333083_+_456aa MADDIDIEAMLEAPYKKDENKLSSANGHEERSKKRKKSKSRSRSHERKRSKSKERKRSRDRERKKSKSRERKRSRSKERRRSRSRSRDRR FRGRYRSPYSGPKFNSAIRGKIGLPHSIKLSRRRSRSKSPFRKDKSPVREPIDNLTPEERDARTVFCMQLAARIRPRDLEEFFSTVGKVR DVRMISDRNSRRSKGIAYVEFVDVSSVPLAIGLTGQRVLGVPIIVQASQAEKNRAAAMANNLQKGSAGPMRLYVGSLHFNITEDMLRGIF EPFGRIESIQLMMDSETGRSKGYGFITFSDSECAKKALEQLNGFELAGRPMKVGHVTERTDASSASSFLDSDELERTGIDLGTTGRLQLM ARLAEGTGLQIPPAAQQALQMSGSLAFGAVAEYILEPPPCISAPENCTHLCTMQEDCEKGFQCCSSFCGIVCSSETFQKRNRIKHKGSEV >In-frame_RBM39_ENST00000361162_chr20_34300941_-_WFDC13_ENST00000305479_chr20_44333083_+_456aa MADDIDIEAMLEAPYKKDENKLSSANGHEERSKKRKKSKSRSRSHERKRSKSKERKRSRDRERKKSKSRERKRSRSKERRRSRSRSRDRR FRGRYRSPYSGPKFNSAIRGKIGLPHSIKLSRRRSRSKSPFRKDKSPVREPIDNLTPEERDARTVFCMQLAARIRPRDLEEFFSTVGKVR DVRMISDRNSRRSKGIAYVEFVDVSSVPLAIGLTGQRVLGVPIIVQASQAEKNRAAAMANNLQKGSAGPMRLYVGSLHFNITEDMLRGIF EPFGRIESIQLMMDSETGRSKGYGFITFSDSECAKKALEQLNGFELAGRPMKVGHVTERTDASSASSFLDSDELERTGIDLGTTGRLQLM ARLAEGTGLQIPPAAQQALQMSGSLAFGAVAEYILEPPPCISAPENCTHLCTMQEDCEKGFQCCSSFCGIVCSSETFQKRNRIKHKGSEV >In-frame_RBM39_ENST00000528062_chr20_34300941_-_WFDC13_ENST00000305479_chr20_44333083_+_434aa MADDIDIEAMLEAPYKKDENKLSSANGHEERSKKRKKSKSRSRSHERKRSKSKERKRSRDRERKKSKSRERKRSRSKERRRSRSRSRDRR FRGRYRSPYRRRSRSKSPFRKDKSPVREPIDNLTPEERDARTVFCMQLAARIRPRDLEEFFSTVGKVRDVRMISDRNSRRSKGIAYVEFV DVSSVPLAIGLTGQRVLGVPIIVQASQAEKNRAAAMANNLQKGSAGPMRLYVGSLHFNITEDMLRGIFEPFGRIESIQLMMDSETGRSKG YGFITFSDSECAKKALEQLNGFELAGRPMKVGHVTERTDASSASSFLDSDELERTGIDLGTTGRLQLMARLAEGTGLQIPPAAQQALQMS >In-frame_RBM39_ENST00000407261_chr20_34300941_-_WFDC13_ENST00000305479_chr20_44333083_+_64aa |
| * Fusion transcript sequences (only coding sequence (CDS) region). |
| >In-frame_RBM39_ENST00000253363_chr20_34300941_-_WFDC13_ENST00000305479_chr20_44333083_+_1368nt ATGGCAGACGATATTGATATTGAAGCAATGCTTGAGGCTCCTTACAAGAAGGATGAGAACAAGTTGAGCAGTGCCAACGGCCATGAAGAA CGTAGCAAAAAGAGGAAAAAAAGCAAGAGCAGAAGTCGTAGTCATGAACGAAAGAGAAGCAAAAGTAAGGAACGGAAGCGAAGTAGAGAC AGAGAAAGGAAAAAGAGCAAAAGCCGTGAAAGAAAGCGAAGTAGAAGCAAAGAGAGGCGACGGAGCCGCTCAAGAAGTCGAGATCGAAGA TTTAGAGGCCGCTACAGAAGTCCTTACTCCGGACCAAAATTTAACAGTGCCATCCGAGGAAAGATTGGGTTGCCTCATAGCATCAAATTA AGCAGACGACGTTCCCGAAGCAAAAGTCCATTCAGAAAAGACAAGAGCCCTGTGAGAGAACCTATTGATAATTTAACTCCTGAGGAAAGA GATGCAAGGACAGTCTTCTGTATGCAGCTGGCGGCAAGAATTCGACCAAGGGATTTGGAAGAGTTTTTCTCTACAGTAGGAAAGGTTCGA GATGTGAGGATGATTTCTGACAGAAATTCAAGACGTTCCAAAGGAATTGCTTATGTGGAGTTCGTCGATGTTAGCTCAGTGCCTCTAGCA ATAGGATTAACTGGCCAACGAGTTTTAGGCGTGCCAATCATAGTACAGGCATCACAGGCAGAAAAAAACAGAGCTGCAGCAATGGCAAAC AATTTACAAAAGGGAAGTGCTGGACCTATGAGGCTTTATGTGGGCTCATTACACTTCAACATAACTGAAGATATGCTTCGTGGGATCTTT GAGCCTTTTGGAAGAATTGAAAGTATCCAGCTGATGATGGACAGTGAAACTGGTCGATCCAAGGGATATGGATTTATTACATTTTCTGAC TCAGAATGTGCCAAAAAGGCTTTGGAACAACTTAATGGATTTGAACTAGCAGGAAGACCAATGAAAGTTGGTCATGTTACTGAACGTACT GATGCTTCGAGTGCTAGTTCATTTTTGGACAGTGATGAACTGGAAAGGACTGGAATTGATTTGGGAACAACTGGTCGTCTTCAGTTAATG GCAAGACTTGCAGAGGGTACAGGTTTGCAGATTCCGCCAGCAGCACAGCAAGCTCTACAGATGAGTGGCTCTTTGGCATTTGGTGCTGTG GCAGAGTATATCTTGGAACCTCCACCCTGCATATCAGCACCTGAAAACTGTACTCACCTGTGTACAATGCAGGAAGATTGCGAGAAAGGA TTTCAGTGCTGTTCCTCCTTCTGTGGGATAGTCTGTTCATCAGAAACATTTCAAAAGCGCAACAGAATCAAACACAAGGGCTCAGAAGTC >In-frame_RBM39_ENST00000361162_chr20_34300941_-_WFDC13_ENST00000305479_chr20_44333083_+_1368nt ATGGCAGACGATATTGATATTGAAGCAATGCTTGAGGCTCCTTACAAGAAGGATGAGAACAAGTTGAGCAGTGCCAACGGCCATGAAGAA CGTAGCAAAAAGAGGAAAAAAAGCAAGAGCAGAAGTCGTAGTCATGAACGAAAGAGAAGCAAAAGTAAGGAACGGAAGCGAAGTAGAGAC AGAGAAAGGAAAAAGAGCAAAAGCCGTGAAAGAAAGCGAAGTAGAAGCAAAGAGAGGCGACGGAGCCGCTCAAGAAGTCGAGATCGAAGA TTTAGAGGCCGCTACAGAAGTCCTTACTCCGGACCAAAATTTAACAGTGCCATCCGAGGAAAGATTGGGTTGCCTCATAGCATCAAATTA AGCAGACGACGTTCCCGAAGCAAAAGTCCATTCAGAAAAGACAAGAGCCCTGTGAGAGAACCTATTGATAATTTAACTCCTGAGGAAAGA GATGCAAGGACAGTCTTCTGTATGCAGCTGGCGGCAAGAATTCGACCAAGGGATTTGGAAGAGTTTTTCTCTACAGTAGGAAAGGTTCGA GATGTGAGGATGATTTCTGACAGAAATTCAAGACGTTCCAAAGGAATTGCTTATGTGGAGTTCGTCGATGTTAGCTCAGTGCCTCTAGCA ATAGGATTAACTGGCCAACGAGTTTTAGGCGTGCCAATCATAGTACAGGCATCACAGGCAGAAAAAAACAGAGCTGCAGCAATGGCAAAC AATTTACAAAAGGGAAGTGCTGGACCTATGAGGCTTTATGTGGGCTCATTACACTTCAACATAACTGAAGATATGCTTCGTGGGATCTTT GAGCCTTTTGGAAGAATTGAAAGTATCCAGCTGATGATGGACAGTGAAACTGGTCGATCCAAGGGATATGGATTTATTACATTTTCTGAC TCAGAATGTGCCAAAAAGGCTTTGGAACAACTTAATGGATTTGAACTAGCAGGAAGACCAATGAAAGTTGGTCATGTTACTGAACGTACT GATGCTTCGAGTGCTAGTTCATTTTTGGACAGTGATGAACTGGAAAGGACTGGAATTGATTTGGGAACAACTGGTCGTCTTCAGTTAATG GCAAGACTTGCAGAGGGTACAGGTTTGCAGATTCCGCCAGCAGCACAGCAAGCTCTACAGATGAGTGGCTCTTTGGCATTTGGTGCTGTG GCAGAGTATATCTTGGAACCTCCACCCTGCATATCAGCACCTGAAAACTGTACTCACCTGTGTACAATGCAGGAAGATTGCGAGAAAGGA TTTCAGTGCTGTTCCTCCTTCTGTGGGATAGTCTGTTCATCAGAAACATTTCAAAAGCGCAACAGAATCAAACACAAGGGCTCAGAAGTC >In-frame_RBM39_ENST00000528062_chr20_34300941_-_WFDC13_ENST00000305479_chr20_44333083_+_1302nt ATGGCAGACGATATTGATATTGAAGCAATGCTTGAGGCTCCTTACAAGAAGGATGAGAACAAGTTGAGCAGTGCCAACGGCCATGAAGAA CGTAGCAAAAAGAGGAAAAAAAGCAAGAGCAGAAGTCGTAGTCATGAACGAAAGAGAAGCAAAAGTAAGGAACGGAAGCGAAGTAGAGAC AGAGAAAGGAAAAAGAGCAAAAGCCGTGAAAGAAAGCGAAGTAGAAGCAAAGAGAGGCGACGGAGCCGCTCAAGAAGTCGAGATCGAAGA TTTAGAGGCCGCTACAGAAGTCCTTACAGACGACGTTCCCGAAGCAAAAGTCCATTCAGAAAAGACAAGAGCCCTGTGAGAGAACCTATT GATAATTTAACTCCTGAGGAAAGAGATGCAAGGACAGTCTTCTGTATGCAGCTGGCGGCAAGAATTCGACCAAGGGATTTGGAAGAGTTT TTCTCTACAGTAGGAAAGGTTCGAGATGTGAGGATGATTTCTGACAGAAATTCAAGACGTTCCAAAGGAATTGCTTATGTGGAGTTCGTC GATGTTAGCTCAGTGCCTCTAGCAATAGGATTAACTGGCCAACGAGTTTTAGGCGTGCCAATCATAGTACAGGCATCACAGGCAGAAAAA AACAGAGCTGCAGCAATGGCAAACAATTTACAAAAGGGAAGTGCTGGACCTATGAGGCTTTATGTGGGCTCATTACACTTCAACATAACT GAAGATATGCTTCGTGGGATCTTTGAGCCTTTTGGAAGAATTGAAAGTATCCAGCTGATGATGGACAGTGAAACTGGTCGATCCAAGGGA TATGGATTTATTACATTTTCTGACTCAGAATGTGCCAAAAAGGCTTTGGAACAACTTAATGGATTTGAACTAGCAGGAAGACCAATGAAA GTTGGTCATGTTACTGAACGTACTGATGCTTCGAGTGCTAGTTCATTTTTGGACAGTGATGAACTGGAAAGGACTGGAATTGATTTGGGA ACAACTGGTCGTCTTCAGTTAATGGCAAGACTTGCAGAGGGTACAGGTTTGCAGATTCCGCCAGCAGCACAGCAAGCTCTACAGATGAGT GGCTCTTTGGCATTTGGTGCTGTGGCAGAGTATATCTTGGAACCTCCACCCTGCATATCAGCACCTGAAAACTGTACTCACCTGTGTACA ATGCAGGAAGATTGCGAGAAAGGATTTCAGTGCTGTTCCTCCTTCTGTGGGATAGTCTGTTCATCAGAAACATTTCAAAAGCGCAACAGA >In-frame_RBM39_ENST00000407261_chr20_34300941_-_WFDC13_ENST00000305479_chr20_44333083_+_194nt AGTATATCTTGGAACCTCCACCCTGCATATCAGCACCTGAAAACTGTACTCACCTGTGTACAATGCAGGAAGATTGCGAGAAAGGATTTC AGTGCTGTTCCTCCTTCTGTGGGATAGTCTGTTCATCAGAAACATTTCAAAAGCGCAACAGAATCAAACACAAGGGCTCAGAAGTCATCA |
| * Fusion transcript sequences (Full-length transcript). |
| >In-frame_RBM39_ENST00000253363_chr20_34300941_-_WFDC13_ENST00000305479_chr20_44333083_+_2374nt GGCCGGAACAGGCGTTTAGAGAAAATGGCAGACGATATTGATATTGAAGCAATGCTTGAGGCTCCTTACAAGAAGGATGAGAACAAGTTG AGCAGTGCCAACGGCCATGAAGAACGTAGCAAAAAGAGGAAAAAAAGCAAGAGCAGAAGTCGTAGTCATGAACGAAAGAGAAGCAAAAGT AAGGAACGGAAGCGAAGTAGAGACAGAGAAAGGAAAAAGAGCAAAAGCCGTGAAAGAAAGCGAAGTAGAAGCAAAGAGAGGCGACGGAGC CGCTCAAGAAGTCGAGATCGAAGATTTAGAGGCCGCTACAGAAGTCCTTACTCCGGACCAAAATTTAACAGTGCCATCCGAGGAAAGATT GGGTTGCCTCATAGCATCAAATTAAGCAGACGACGTTCCCGAAGCAAAAGTCCATTCAGAAAAGACAAGAGCCCTGTGAGAGAACCTATT GATAATTTAACTCCTGAGGAAAGAGATGCAAGGACAGTCTTCTGTATGCAGCTGGCGGCAAGAATTCGACCAAGGGATTTGGAAGAGTTT TTCTCTACAGTAGGAAAGGTTCGAGATGTGAGGATGATTTCTGACAGAAATTCAAGACGTTCCAAAGGAATTGCTTATGTGGAGTTCGTC GATGTTAGCTCAGTGCCTCTAGCAATAGGATTAACTGGCCAACGAGTTTTAGGCGTGCCAATCATAGTACAGGCATCACAGGCAGAAAAA AACAGAGCTGCAGCAATGGCAAACAATTTACAAAAGGGAAGTGCTGGACCTATGAGGCTTTATGTGGGCTCATTACACTTCAACATAACT GAAGATATGCTTCGTGGGATCTTTGAGCCTTTTGGAAGAATTGAAAGTATCCAGCTGATGATGGACAGTGAAACTGGTCGATCCAAGGGA TATGGATTTATTACATTTTCTGACTCAGAATGTGCCAAAAAGGCTTTGGAACAACTTAATGGATTTGAACTAGCAGGAAGACCAATGAAA GTTGGTCATGTTACTGAACGTACTGATGCTTCGAGTGCTAGTTCATTTTTGGACAGTGATGAACTGGAAAGGACTGGAATTGATTTGGGA ACAACTGGTCGTCTTCAGTTAATGGCAAGACTTGCAGAGGGTACAGGTTTGCAGATTCCGCCAGCAGCACAGCAAGCTCTACAGATGAGT GGCTCTTTGGCATTTGGTGCTGTGGCAGAGTATATCTTGGAACCTCCACCCTGCATATCAGCACCTGAAAACTGTACTCACCTGTGTACA ATGCAGGAAGATTGCGAGAAAGGATTTCAGTGCTGTTCCTCCTTCTGTGGGATAGTCTGTTCATCAGAAACATTTCAAAAGCGCAACAGA ATCAAACACAAGGGCTCAGAAGTCATCATGCCTGCCAACTGAGGCATATTTCCTAGATCATTTTGCCTCTACGATGTTTTTTCTTGGTCC ACCTTTAGGAAGGTATTGAGAAGCAAGAAACTGGAGGCCCAATATCTAACCTGCAAATCGTTTTTGAGTTTGGCAATAAAGGCTAATCTA CCATAAAACTCTTGAAGCTTAAGCTTTAGGTCAACACTTGCAAGAGCCCCTTCCAAAGCTCAGCACAGTTTCCTCCTGGGATGAGGAGAG GAATCAGAAACCCCACTTTGGCATAGAGACAAGCAGCACTGTTCCAGTCCAGGGATGCTGTGTGTGCCCTGGTGGTGGTCTTAAGGACCT ACCACATCAACATCTGGACAACCCTCACTGATTACCTGCCCTTGGTTGCACTCATCAGGCTAATTGATCCCATATTTAACCTCAAGGAGA AATATCAACCAGACACTGCATGGCAACCTCCTTGGGGCCAGCCTTCAAGGCTTCATGGCCATATCATGAACCCAGGACAGGCACAGTGGG GGTGGTGAGGACCTGATAGAGTTGGATCAGTGACTAAGAGGCTGCAATAAGGTGCCATGAAATCAAAATCAAAGGGCTAGAACTCTCCAA GGTCTTGCCCCCGGCATGTAGCACCACCTGAGCCAGAAACTGCAGAGGACATGACAGTGTGGCATTACTGATAAGTTATGGAAATGGAAA TAATCTTTCCTAAACTACCAATAATAACTTTAAATTTTTGATCAACCATGCTAGAGCAAAGATTGAATTATCCTTCTGTTCTCTCTACAG AAATGATATAAAAACTATAGTCATAAGAAGAGACAATCAAAAATAATCAGCCATAAAATATTAAAAAGGTATTATAAAGGTATTTAAAAT AATAATAATAAAGTGTTATTTTCCTGGGATTCATGATATTTGATATATTCGTAAGCTTTTGTTAAGTTTGTAATTTGTTGCAATTTCTTT >In-frame_RBM39_ENST00000361162_chr20_34300941_-_WFDC13_ENST00000305479_chr20_44333083_+_2735nt GCGAGAGCCCGTGCTGAGGGCTCTGTGAGGCCCCGTGTGTTTGTGTGTGTGTATGTGTGCTGGTGAATGTGAGTACAGGGAAGCAGCGGC CGCCATTTCAGGGAGCTTGTCGACGCTGTCGCAGGGGTGGATCCTGAGCTGCCGAAGCCGCCGTCCTGCTCTCCCGCGTGGGCTTCTCTA ATTCCATTGTTTTTTTTAGATTCTCTCGGGCCTAGCCGTCCTTGGAACCCGATATTCGGGCTGGGCGGTTCCGCGGCCTGGGCCTAGGGG CTTAACAGTAGCAACAGAAGCGGCGGCGGCGGCAGCAGCAGCAGCAGCAGCAGCAATCTCTTCCCGAACACGAGCACCACAGGCGCCCGA AGGCCGGAACAGGCGTTTAGAGAAAATGGCAGACGATATTGATATTGAAGCAATGCTTGAGGCTCCTTACAAGAAGGATGAGAACAAGTT GAGCAGTGCCAACGGCCATGAAGAACGTAGCAAAAAGAGGAAAAAAAGCAAGAGCAGAAGTCGTAGTCATGAACGAAAGAGAAGCAAAAG TAAGGAACGGAAGCGAAGTAGAGACAGAGAAAGGAAAAAGAGCAAAAGCCGTGAAAGAAAGCGAAGTAGAAGCAAAGAGAGGCGACGGAG CCGCTCAAGAAGTCGAGATCGAAGATTTAGAGGCCGCTACAGAAGTCCTTACTCCGGACCAAAATTTAACAGTGCCATCCGAGGAAAGAT TGGGTTGCCTCATAGCATCAAATTAAGCAGACGACGTTCCCGAAGCAAAAGTCCATTCAGAAAAGACAAGAGCCCTGTGAGAGAACCTAT TGATAATTTAACTCCTGAGGAAAGAGATGCAAGGACAGTCTTCTGTATGCAGCTGGCGGCAAGAATTCGACCAAGGGATTTGGAAGAGTT TTTCTCTACAGTAGGAAAGGTTCGAGATGTGAGGATGATTTCTGACAGAAATTCAAGACGTTCCAAAGGAATTGCTTATGTGGAGTTCGT CGATGTTAGCTCAGTGCCTCTAGCAATAGGATTAACTGGCCAACGAGTTTTAGGCGTGCCAATCATAGTACAGGCATCACAGGCAGAAAA AAACAGAGCTGCAGCAATGGCAAACAATTTACAAAAGGGAAGTGCTGGACCTATGAGGCTTTATGTGGGCTCATTACACTTCAACATAAC TGAAGATATGCTTCGTGGGATCTTTGAGCCTTTTGGAAGAATTGAAAGTATCCAGCTGATGATGGACAGTGAAACTGGTCGATCCAAGGG ATATGGATTTATTACATTTTCTGACTCAGAATGTGCCAAAAAGGCTTTGGAACAACTTAATGGATTTGAACTAGCAGGAAGACCAATGAA AGTTGGTCATGTTACTGAACGTACTGATGCTTCGAGTGCTAGTTCATTTTTGGACAGTGATGAACTGGAAAGGACTGGAATTGATTTGGG AACAACTGGTCGTCTTCAGTTAATGGCAAGACTTGCAGAGGGTACAGGTTTGCAGATTCCGCCAGCAGCACAGCAAGCTCTACAGATGAG TGGCTCTTTGGCATTTGGTGCTGTGGCAGAGTATATCTTGGAACCTCCACCCTGCATATCAGCACCTGAAAACTGTACTCACCTGTGTAC AATGCAGGAAGATTGCGAGAAAGGATTTCAGTGCTGTTCCTCCTTCTGTGGGATAGTCTGTTCATCAGAAACATTTCAAAAGCGCAACAG AATCAAACACAAGGGCTCAGAAGTCATCATGCCTGCCAACTGAGGCATATTTCCTAGATCATTTTGCCTCTACGATGTTTTTTCTTGGTC CACCTTTAGGAAGGTATTGAGAAGCAAGAAACTGGAGGCCCAATATCTAACCTGCAAATCGTTTTTGAGTTTGGCAATAAAGGCTAATCT ACCATAAAACTCTTGAAGCTTAAGCTTTAGGTCAACACTTGCAAGAGCCCCTTCCAAAGCTCAGCACAGTTTCCTCCTGGGATGAGGAGA GGAATCAGAAACCCCACTTTGGCATAGAGACAAGCAGCACTGTTCCAGTCCAGGGATGCTGTGTGTGCCCTGGTGGTGGTCTTAAGGACC TACCACATCAACATCTGGACAACCCTCACTGATTACCTGCCCTTGGTTGCACTCATCAGGCTAATTGATCCCATATTTAACCTCAAGGAG AAATATCAACCAGACACTGCATGGCAACCTCCTTGGGGCCAGCCTTCAAGGCTTCATGGCCATATCATGAACCCAGGACAGGCACAGTGG GGGTGGTGAGGACCTGATAGAGTTGGATCAGTGACTAAGAGGCTGCAATAAGGTGCCATGAAATCAAAATCAAAGGGCTAGAACTCTCCA AGGTCTTGCCCCCGGCATGTAGCACCACCTGAGCCAGAAACTGCAGAGGACATGACAGTGTGGCATTACTGATAAGTTATGGAAATGGAA ATAATCTTTCCTAAACTACCAATAATAACTTTAAATTTTTGATCAACCATGCTAGAGCAAAGATTGAATTATCCTTCTGTTCTCTCTACA GAAATGATATAAAAACTATAGTCATAAGAAGAGACAATCAAAAATAATCAGCCATAAAATATTAAAAAGGTATTATAAAGGTATTTAAAA TAATAATAATAAAGTGTTATTTTCCTGGGATTCATGATATTTGATATATTCGTAAGCTTTTGTTAAGTTTGTAATTTGTTGCAATTTCTT >In-frame_RBM39_ENST00000528062_chr20_34300941_-_WFDC13_ENST00000305479_chr20_44333083_+_2595nt ACAGGGAAGCAGCGGCCGCCATTTCAGGGAGCTTGTCGACGCTGTCGCAGGGGTGGATCCTGAGCTGCCGAAGCCGCCGTCCTGCTCTCC CGCGTGGGCTTCTCTAATTCCATTGTTTTTTTTAGATTCTCTCGGGCCTAGCCGTCCTTGGAACCCGATATTCGGGCTGGGCGGTTCCGC GGCCTGGGCCTAGGGGCTTAACAGTAGCAACAGAAGCGGCGGCGGCGGCAGCAGCAGCAGCAGCAGCAGCAATCTCTTCCCGAACACGAG CACCACAGGCGCCCGAAGGCCGGAACAGGCGTTTAGAGAAAATGGCAGACGATATTGATATTGAAGCAATGCTTGAGGCTCCTTACAAGA AGGATGAGAACAAGTTGAGCAGTGCCAACGGCCATGAAGAACGTAGCAAAAAGAGGAAAAAAAGCAAGAGCAGAAGTCGTAGTCATGAAC GAAAGAGAAGCAAAAGTAAGGAACGGAAGCGAAGTAGAGACAGAGAAAGGAAAAAGAGCAAAAGCCGTGAAAGAAAGCGAAGTAGAAGCA AAGAGAGGCGACGGAGCCGCTCAAGAAGTCGAGATCGAAGATTTAGAGGCCGCTACAGAAGTCCTTACAGACGACGTTCCCGAAGCAAAA GTCCATTCAGAAAAGACAAGAGCCCTGTGAGAGAACCTATTGATAATTTAACTCCTGAGGAAAGAGATGCAAGGACAGTCTTCTGTATGC AGCTGGCGGCAAGAATTCGACCAAGGGATTTGGAAGAGTTTTTCTCTACAGTAGGAAAGGTTCGAGATGTGAGGATGATTTCTGACAGAA ATTCAAGACGTTCCAAAGGAATTGCTTATGTGGAGTTCGTCGATGTTAGCTCAGTGCCTCTAGCAATAGGATTAACTGGCCAACGAGTTT TAGGCGTGCCAATCATAGTACAGGCATCACAGGCAGAAAAAAACAGAGCTGCAGCAATGGCAAACAATTTACAAAAGGGAAGTGCTGGAC CTATGAGGCTTTATGTGGGCTCATTACACTTCAACATAACTGAAGATATGCTTCGTGGGATCTTTGAGCCTTTTGGAAGAATTGAAAGTA TCCAGCTGATGATGGACAGTGAAACTGGTCGATCCAAGGGATATGGATTTATTACATTTTCTGACTCAGAATGTGCCAAAAAGGCTTTGG AACAACTTAATGGATTTGAACTAGCAGGAAGACCAATGAAAGTTGGTCATGTTACTGAACGTACTGATGCTTCGAGTGCTAGTTCATTTT TGGACAGTGATGAACTGGAAAGGACTGGAATTGATTTGGGAACAACTGGTCGTCTTCAGTTAATGGCAAGACTTGCAGAGGGTACAGGTT TGCAGATTCCGCCAGCAGCACAGCAAGCTCTACAGATGAGTGGCTCTTTGGCATTTGGTGCTGTGGCAGAGTATATCTTGGAACCTCCAC CCTGCATATCAGCACCTGAAAACTGTACTCACCTGTGTACAATGCAGGAAGATTGCGAGAAAGGATTTCAGTGCTGTTCCTCCTTCTGTG GGATAGTCTGTTCATCAGAAACATTTCAAAAGCGCAACAGAATCAAACACAAGGGCTCAGAAGTCATCATGCCTGCCAACTGAGGCATAT TTCCTAGATCATTTTGCCTCTACGATGTTTTTTCTTGGTCCACCTTTAGGAAGGTATTGAGAAGCAAGAAACTGGAGGCCCAATATCTAA CCTGCAAATCGTTTTTGAGTTTGGCAATAAAGGCTAATCTACCATAAAACTCTTGAAGCTTAAGCTTTAGGTCAACACTTGCAAGAGCCC CTTCCAAAGCTCAGCACAGTTTCCTCCTGGGATGAGGAGAGGAATCAGAAACCCCACTTTGGCATAGAGACAAGCAGCACTGTTCCAGTC CAGGGATGCTGTGTGTGCCCTGGTGGTGGTCTTAAGGACCTACCACATCAACATCTGGACAACCCTCACTGATTACCTGCCCTTGGTTGC ACTCATCAGGCTAATTGATCCCATATTTAACCTCAAGGAGAAATATCAACCAGACACTGCATGGCAACCTCCTTGGGGCCAGCCTTCAAG GCTTCATGGCCATATCATGAACCCAGGACAGGCACAGTGGGGGTGGTGAGGACCTGATAGAGTTGGATCAGTGACTAAGAGGCTGCAATA AGGTGCCATGAAATCAAAATCAAAGGGCTAGAACTCTCCAAGGTCTTGCCCCCGGCATGTAGCACCACCTGAGCCAGAAACTGCAGAGGA CATGACAGTGTGGCATTACTGATAAGTTATGGAAATGGAAATAATCTTTCCTAAACTACCAATAATAACTTTAAATTTTTGATCAACCAT GCTAGAGCAAAGATTGAATTATCCTTCTGTTCTCTCTACAGAAATGATATAAAAACTATAGTCATAAGAAGAGACAATCAAAAATAATCA GCCATAAAATATTAAAAAGGTATTATAAAGGTATTTAAAATAATAATAATAAAGTGTTATTTTCCTGGGATTCATGATATTTGATATATT >In-frame_RBM39_ENST00000407261_chr20_34300941_-_WFDC13_ENST00000305479_chr20_44333083_+_2751nt GTGCTGGTGAATGTGAGTACAGGGAAGCAGCGGCCGCCATTTCAGGGAGCTTGTCGACGCTGTCGCAGGGGTGGATCCTGAGCTGCCGAA GCCGCCGTCCTGCTCTCCCGCGTGGGCTTCTCTAATTCCATTGTTTTTTTTAGATTCTCTCGGGCCTAGCCGTCCTTGGAACCCGATATT CGGGCTGGGCGGTTCCGCGGCCTGGGCCTAGGGGCTTAACAGTAGCAACAGAAGCGGCGGCGGCGGCAGCAGCAGCAGCAGCAGCAGCAA TCTCTTCCCGAACACGAGCACCACAGGCGCCCGAAGGCCGGAACAGGCGTTTAGAGAAAATGGCAGACGATATTGATATTGAAGCAATGC TTGAGGCTCCTTACAAGAAGGATGAGAACAAGTTGAGCAGTGCCAACGGCCATGAAGAACGTAGCAAAAAACAAACTTTCTGCCTCCTTG GAAAGCTCTACATCTCCTTGTGATTGGAGTGTGGGTTTCAAGATTCCAGAAGGAGGAAAAAAAGCAAGAGCAGAAGTCGTAGTCATGAAC GAAAGAGAAGCAAAAGTAAGGAACGGAAGCGAAGTAGAGACAGAGAAAGGAAAAAGAGCAAAAGCCGTGAAAGAAAGCGAAGTAGAAGCA AAGAGAGGCGACGGAGCCGCTCAAGAAGTCGAGATCGAAGATTTAGAGGCCGCTACAGAAGTCCTTACTCCGGACCAAAATTTAACAGTG CCATCCGAGGAAAGATTGGGTTGCCTCATAGCATCAAATTAAGCAGACGACGTTCCCGAAGCAAAAGTCCATTCAGAAAAGACAAGAGCC CTGTGAGAGAACCTATTGATAATTTAACTCCTGAGGAAAGAGATGCAAGGACAGTCTTCTGTATGCAGCTGGCGGCAAGAATTCGACCAA GGGATTTGGAAGAGTTTTTCTCTACAGTAGGAAAGGTTCGAGATGTGAGGATGATTTCTGACAGAAATTCAAGACGTTCCAAAGGAATTG CTTATGTGGAGTTCGTCGATGTTAGCTCAGTGCCTCTAGCAATAGGATTAACTGGCCAACGAGTTTTAGGCGTGCCAATCATAGTACAGG CATCACAGGCAGAAAAAAACAGAGCTGCAGCAATGGCAAACAATTTACAAAAGGGAAGTGCTGGACCTATGAGGCTTTATGTGGGCTCAT TACACTTCAACATAACTGAAGATATGCTTCGTGGGATCTTTGAGCCTTTTGGAAGAATTGAAAGTATCCAGCTGATGATGGACAGTGAAA CTGGTCGATCCAAGGGATATGGATTTATTACATTTTCTGACTCAGAATGTGCCAAAAAGGCTTTGGAACAACTTAATGGATTTGAACTAG CAGGAAGACCAATGAAAGTTGGTCATGTTACTGAACGTACTGATGCTTCGAGTGCTAGTTCATTTTTGGACAGTGATGAACTGGAAAGGA CTGGAATTGATTTGGGAACAACTGGTCGTCTTCAGTTAATGGCAAGACTTGCAGAGGGTACAGGTTTGCAGATTCCGCCAGCAGCACAGC AAGCTCTACAGATGAGTGGCTCTTTGGCATTTGGTGCTGTGGCAGAGTATATCTTGGAACCTCCACCCTGCATATCAGCACCTGAAAACT GTACTCACCTGTGTACAATGCAGGAAGATTGCGAGAAAGGATTTCAGTGCTGTTCCTCCTTCTGTGGGATAGTCTGTTCATCAGAAACAT TTCAAAAGCGCAACAGAATCAAACACAAGGGCTCAGAAGTCATCATGCCTGCCAACTGAGGCATATTTCCTAGATCATTTTGCCTCTACG ATGTTTTTTCTTGGTCCACCTTTAGGAAGGTATTGAGAAGCAAGAAACTGGAGGCCCAATATCTAACCTGCAAATCGTTTTTGAGTTTGG CAATAAAGGCTAATCTACCATAAAACTCTTGAAGCTTAAGCTTTAGGTCAACACTTGCAAGAGCCCCTTCCAAAGCTCAGCACAGTTTCC TCCTGGGATGAGGAGAGGAATCAGAAACCCCACTTTGGCATAGAGACAAGCAGCACTGTTCCAGTCCAGGGATGCTGTGTGTGCCCTGGT GGTGGTCTTAAGGACCTACCACATCAACATCTGGACAACCCTCACTGATTACCTGCCCTTGGTTGCACTCATCAGGCTAATTGATCCCAT ATTTAACCTCAAGGAGAAATATCAACCAGACACTGCATGGCAACCTCCTTGGGGCCAGCCTTCAAGGCTTCATGGCCATATCATGAACCC AGGACAGGCACAGTGGGGGTGGTGAGGACCTGATAGAGTTGGATCAGTGACTAAGAGGCTGCAATAAGGTGCCATGAAATCAAAATCAAA GGGCTAGAACTCTCCAAGGTCTTGCCCCCGGCATGTAGCACCACCTGAGCCAGAAACTGCAGAGGACATGACAGTGTGGCATTACTGATA AGTTATGGAAATGGAAATAATCTTTCCTAAACTACCAATAATAACTTTAAATTTTTGATCAACCATGCTAGAGCAAAGATTGAATTATCC TTCTGTTCTCTCTACAGAAATGATATAAAAACTATAGTCATAAGAAGAGACAATCAAAAATAATCAGCCATAAAATATTAAAAAGGTATT ATAAAGGTATTTAAAATAATAATAATAAAGTGTTATTTTCCTGGGATTCATGATATTTGATATATTCGTAAGCTTTTGTTAAGTTTGTAA |
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FusionGenePPI for RBM39_WFDC13 |
| Go to ChiPPI (Chimeric Protein-Protein interactions) to see the chimeric PPI interaction in . |
| Protein-protein interactors with each fusion partner protein in wild-type (BIOGRID-3.4.160) |
| Hgene | Hgene's interactors | Tgene | Tgene's interactors |
| RBM39 | ESR2, ESR1, JUN, HNRNPA1, CDK9, KHDRBS2, SRRM1, SRRM2, HIST1H1C, CTNNBL1, TADA2A, UBC, MME, HDAC5, SND1, RPS2, RPS3, ACIN1, SNRNP200, CDK12, SF3B1, RBM25, PNN, U2AF2, PCBP3, TRA2B, LUC7L2, SRSF7, SRSF1, SAP18, SNRPD1, HNRNPU, XRCC5, XRCC6, IRF2BP2, RPS13, RPL27A, IRF2BPL, HDGF, SF3A2, SIRT7, TCF3, NR2C1, CUL3, CUL1, COPS5, CAND1, PGR, APP, SMU1, DDX3X, BCAS2, PLRG1, NHP2L1, USP39, PRPF19, RALY, TOP1, DDX21, GPATCH1, ILF3, RRP7A, SEPT7, TRMT112, UTP14A, S100A9, RRS1, RAN, SEPT2, RBM14, VTN, FLNA, RPS14, BARD1, MDC1, MAGOH, PRPF40A, CHERP, RBM23, PRPF3, PRPF38A, SAP30BP, HNRNPH2, NKAP, TOE1, TTC14, ZCCHC10, RNF113A, SRPK2, AICDA, SRPK1, CLK2, SRPK3, TARDBP, RPA3, RPA2, RPA1, WWOX, SPRTN, TP53, PHC2, GOLGA2, REL, SDCBP, SP100, MLX, ZBTB22, SRSF11, PPIG, SF3B4, KIAA0907, ARL6IP4, BANP, THAP1, C11orf57, HOMEZ, AK8, FAM200A, SREK1IP1, KRTAP12-2, RP9P, NXF1, CUL7, OBSL1, EZH2, SUZ12, EED, RNF2, HSPB1, PNISR, RBM14-RBM4, CDC5L, SNRNP70, RNPS1, SON, SREK1, SFN, NTRK1, CLK1, AHSA1, SEC16A, LAP3, KMT2E, SNW1, CRBN, ZNF746, EGFR, JMJD6, NCL, MTNR1A, INO80B, TRIM25, MCPH1 | WFDC13 |
| - Retained PPIs in in-frame fusion. |
| Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Still interaction with |
| - Lost PPIs in in-frame fusion. |
| Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Interaction lost with |
| Hgene | RBM39 | chr20:34300941 | chr20:44333083 | ENST00000253363 | - | 12 | 17 | 355_406 | 391 | 531 | ESR1 and ESR2 |
| Hgene | RBM39 | chr20:34300941 | chr20:44333083 | ENST00000361162 | - | 12 | 17 | 355_406 | 391 | 525 | ESR1 and ESR2 |
| Hgene | RBM39 | chr20:34300941 | chr20:44333083 | ENST00000528062 | - | 11 | 16 | 355_406 | 369 | 509 | ESR1 and ESR2 |
| Hgene | RBM39 | chr20:34300941 | chr20:44333083 | ENST00000253363 | - | 12 | 17 | 291_406 | 391 | 531 | JUN |
| Hgene | RBM39 | chr20:34300941 | chr20:44333083 | ENST00000361162 | - | 12 | 17 | 291_406 | 391 | 525 | JUN |
| Hgene | RBM39 | chr20:34300941 | chr20:44333083 | ENST00000528062 | - | 11 | 16 | 291_406 | 369 | 509 | JUN |
| Hgene | RBM39 | chr20:34300941 | chr20:44333083 | ENST00000253363 | - | 12 | 17 | 406_530 | 391 | 531 | NCOA6 |
| Hgene | RBM39 | chr20:34300941 | chr20:44333083 | ENST00000361162 | - | 12 | 17 | 406_530 | 391 | 525 | NCOA6 |
| Hgene | RBM39 | chr20:34300941 | chr20:44333083 | ENST00000528062 | - | 11 | 16 | 406_530 | 369 | 509 | NCOA6 |
| - Retained PPIs, but lost function due to frame-shift fusion. |
| Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Interaction lost with |
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RelatedDrugs for RBM39_WFDC13 |
| Drugs targeting genes involved in this fusion gene. (DrugBank Version 5.1.0 2018-04-02) |
| Partner | Gene | UniProtAcc | DrugBank ID | Drug name | Drug activity | Drug type | Drug status |
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RelatedDiseases for RBM39_WFDC13 |
| Diseases associated with fusion partners. (DisGeNet 4.0) |
| Partner | Gene | Disease ID | Disease name | # pubmeds | Source |
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