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Fusion gene ID: 29556 |
FusionGeneSummary for PTPRM_ELP4 |
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Fusion gene information | Fusion gene name: PTPRM_ELP4 | Fusion gene ID: 29556 | Hgene | Tgene | Gene symbol | PTPRM | ELP4 | Gene ID | 5797 | 26610 |
Gene name | protein tyrosine phosphatase, receptor type M | elongator acetyltransferase complex subunit 4 | |
Synonyms | PTPRL1|R-PTP-MU|RPTPM|RPTPU|hR-PTPu | AN|AN2|C11orf19|PAX6NEB|PAXNEB|dJ68P15A.1|hELP4 | |
Cytomap | 18p11.23 | 11p13 | |
Type of gene | protein-coding | protein-coding | |
Description | receptor-type tyrosine-protein phosphatase muprotein tyrosine phosphatase muprotein tyrosine phosphatase, receptor type, mu polypeptide | elongator complex protein 4PAX6 neighbor gene proteinelongation protein 4 homolog | |
Modification date | 20180522 | 20180523 | |
UniProtAcc | P28827 | Q96EB1 | |
Ensembl transtripts involved in fusion gene | ENST00000580170, ENST00000332175, ENST00000400060, ENST00000400053, ENST00000444013, ENST00000578571, | ENST00000350638, ENST00000379163, ENST00000395934, | |
Fusion gene scores | * DoF score | 9 X 8 X 7=504 | 5 X 4 X 5=100 |
# samples | 9 | 5 | |
** MAII score | log2(9/504*10)=-2.48542682717024 possibly effective Gene in Pan-Cancer Fusion Genes (peGinPCFGs). DoF>8 and MAII<0 | log2(5/100*10)=-1 possibly effective Gene in Pan-Cancer Fusion Genes (peGinPCFGs). DoF>8 and MAII<0 | |
Context | PubMed: PTPRM [Title/Abstract] AND ELP4 [Title/Abstract] AND fusion [Title/Abstract] | ||
Functional or gene categories assigned by FusionGDB annotation |
* DoF score (Degree of Frequency) = # partners X # break points X # cancer types ** MAII score (Major Active Isofusion Index) = log2(# samples/DoF score*10) |
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Partner | Gene | GO ID | GO term | PubMed ID |
Hgene | PTPRM | GO:0006470 | protein dephosphorylation | 8393854|10809770 |
Hgene | PTPRM | GO:0007156 | homophilic cell adhesion via plasma membrane adhesion molecules | 8393854 |
Hgene | PTPRM | GO:0007165 | signal transduction | 15080886 |
Hgene | PTPRM | GO:0031175 | neuron projection development | 16380380 |
Hgene | PTPRM | GO:0031290 | retinal ganglion cell axon guidance | 15080886 |
Hgene | PTPRM | GO:0042493 | response to drug | 18566238 |
Tgene | ELP4 | GO:0006357 | regulation of transcription by RNA polymerase II | 11818576 |
Tgene | ELP4 | GO:0043966 | histone H3 acetylation | 11714725 |
Tgene | ELP4 | GO:0043967 | histone H4 acetylation | 11714725 |
![]() (ChiTars (NAR, 2018), tumorfusions (NAR, 2018), Gao et al. (Cell, 2018)) * All genome coordinats were lifted-over on hg19. * Click on the break point to see the gene structure around the break point region using the UCSC Genome Browser. |
Data type | Source | Cancer type | Sample | Hgene | Hchr | Hbp | Hstrand | Tgene | Tchr | Tbp | Tstrand |
TCGA | RV | COAD | TCGA-DM-A1D6-01A | PTPRM | chr18 | 8143777 | + | ELP4 | chr11 | 31804941 | + |
* LD: Li Ding group's fusion gene list RV: Roel Verhaak group's fusion gene list ChiTaRs fusion database |
![]() * Click on the break point to see the gene structure around the break point region using the UCSC Genome Browser. |
ORF | Henst | Tenst | Hgene | Hchr | Hbp | Hstrand | Tgene | Tchr | Tbp | Tstrand |
Frame-shift | ENST00000580170 | ENST00000350638 | PTPRM | chr18 | 8143777 | + | ELP4 | chr11 | 31804941 | + |
Frame-shift | ENST00000580170 | ENST00000379163 | PTPRM | chr18 | 8143777 | + | ELP4 | chr11 | 31804941 | + |
In-frame | ENST00000580170 | ENST00000395934 | PTPRM | chr18 | 8143777 | + | ELP4 | chr11 | 31804941 | + |
Frame-shift | ENST00000332175 | ENST00000350638 | PTPRM | chr18 | 8143777 | + | ELP4 | chr11 | 31804941 | + |
Frame-shift | ENST00000332175 | ENST00000379163 | PTPRM | chr18 | 8143777 | + | ELP4 | chr11 | 31804941 | + |
In-frame | ENST00000332175 | ENST00000395934 | PTPRM | chr18 | 8143777 | + | ELP4 | chr11 | 31804941 | + |
Frame-shift | ENST00000400060 | ENST00000350638 | PTPRM | chr18 | 8143777 | + | ELP4 | chr11 | 31804941 | + |
Frame-shift | ENST00000400060 | ENST00000379163 | PTPRM | chr18 | 8143777 | + | ELP4 | chr11 | 31804941 | + |
In-frame | ENST00000400060 | ENST00000395934 | PTPRM | chr18 | 8143777 | + | ELP4 | chr11 | 31804941 | + |
Frame-shift | ENST00000400053 | ENST00000350638 | PTPRM | chr18 | 8143777 | + | ELP4 | chr11 | 31804941 | + |
Frame-shift | ENST00000400053 | ENST00000379163 | PTPRM | chr18 | 8143777 | + | ELP4 | chr11 | 31804941 | + |
In-frame | ENST00000400053 | ENST00000395934 | PTPRM | chr18 | 8143777 | + | ELP4 | chr11 | 31804941 | + |
Frame-shift | ENST00000444013 | ENST00000350638 | PTPRM | chr18 | 8143777 | + | ELP4 | chr11 | 31804941 | + |
Frame-shift | ENST00000444013 | ENST00000379163 | PTPRM | chr18 | 8143777 | + | ELP4 | chr11 | 31804941 | + |
In-frame | ENST00000444013 | ENST00000395934 | PTPRM | chr18 | 8143777 | + | ELP4 | chr11 | 31804941 | + |
intron-3CDS | ENST00000578571 | ENST00000350638 | PTPRM | chr18 | 8143777 | + | ELP4 | chr11 | 31804941 | + |
intron-3CDS | ENST00000578571 | ENST00000379163 | PTPRM | chr18 | 8143777 | + | ELP4 | chr11 | 31804941 | + |
intron-3CDS | ENST00000578571 | ENST00000395934 | PTPRM | chr18 | 8143777 | + | ELP4 | chr11 | 31804941 | + |
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FusionProtFeatures for PTPRM_ELP4 |
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Hgene | Tgene |
PTPRM | ELP4 |
Involved in cell-cell adhesion through homophilicinteractions. May play a key role in signal transduction andgrowth control. {ECO:0000269|PubMed:16456543}. | Acts as subunit of the RNA polymerase II elongatorcomplex, which is a histone acetyltransferase component of the RNApolymerase II (Pol II) holoenzyme and is involved intranscriptional elongation. Elongator may play a role in chromatinremodeling and is involved in acetylation of histones H3 andprobably H4. {ECO:0000269|PubMed:11714725,ECO:0000269|PubMed:11818576, ECO:0000269|PubMed:16713582}. |
![]() * Minus value of BPloci means that the break pointn is located before the CDS. |
- In-frame and retained protein feature among the 13 regional features. |
Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Protein feature | Protein feature note |
- In-frame and not-retained protein feature among the 13 regional features. |
Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Protein feature | Protein feature note |
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FusionGeneSequence for PTPRM_ELP4 |
![]() (nt: nucleotides, aa: amino acids) |
* Fusion amino acid sequences. |
>In-frame_PTPRM_ENST00000580170_chr18_8143777_+_ELP4_ENST00000395934_chr11_31804941_+_779aa MRGLGTCLATLAGLLLTAAGETFSGGCLFDEPYSTCGYSQSEGDDFNWEQVNTLTKPTSDPWMPSGSFMLVNASGRPEGQRAHLLLPQLK ENDTHCIDFHYFVSSKSNSPPGLLNVYVKVNNGPLGNPIWNISGDPTRTWNRAELAISTFWPNFYQVIFEVITSGHQGYLAIDEVKVLGH PCTRTPHFLRIQNVEVNAGQFATFQCSAIGRTVAGDRLWLQGIDVRDAPLKEIKVTSSRRFIASFNVVNTTKRDAGKYRCMIRTEGGVGI SNYAELVVKEPPVPIAPPQLASVGATYLWIQLNANSINGDGPIVAREVEYCTASGSWNDRQPVDSTSYKIGHLDPDTEYEISVLLTRPGE GGTGSPGPALRTRTKCADPMRGPRKLEVVEVKSRQITIRWEPFGYNVTRCHSYNLTVHYCYQVGGQEQVREEVSWDTENSHPQHTITNLS PYTNVSVKLILMNPEGRKESQELIVQTDEDLPGAVPTESIQGSTFEEKIFLQWREPTQTYGVITLYEITYKAVSSFDPEIDLSNQSGRVS KLGNETHFLFFGLYPGTTYSFTIRASTAKGFGPPATNQFTTKISAPSMPAYELETPLNQTDNTVTVMLKPAHSRGAPVSVYQIVVEEERP RRTKKTTEILKCYPVPIHFQNASLLNSQYYFAAEFPADSLQAAQPFTIGDNKTYNGYWNTPLLPYKSYRIYFQAASRANGETKIDCVQVA >In-frame_PTPRM_ENST00000332175_chr18_8143777_+_ELP4_ENST00000395934_chr11_31804941_+_779aa MRGLGTCLATLAGLLLTAAGETFSGGCLFDEPYSTCGYSQSEGDDFNWEQVNTLTKPTSDPWMPSGSFMLVNASGRPEGQRAHLLLPQLK ENDTHCIDFHYFVSSKSNSPPGLLNVYVKVNNGPLGNPIWNISGDPTRTWNRAELAISTFWPNFYQVIFEVITSGHQGYLAIDEVKVLGH PCTRTPHFLRIQNVEVNAGQFATFQCSAIGRTVAGDRLWLQGIDVRDAPLKEIKVTSSRRFIASFNVVNTTKRDAGKYRCMIRTEGGVGI SNYAELVVKEPPVPIAPPQLASVGATYLWIQLNANSINGDGPIVAREVEYCTASGSWNDRQPVDSTSYKIGHLDPDTEYEISVLLTRPGE GGTGSPGPALRTRTKCADPMRGPRKLEVVEVKSRQITIRWEPFGYNVTRCHSYNLTVHYCYQVGGQEQVREEVSWDTENSHPQHTITNLS PYTNVSVKLILMNPEGRKESQELIVQTDEDLPGAVPTESIQGSTFEEKIFLQWREPTQTYGVITLYEITYKAVSSFDPEIDLSNQSGRVS KLGNETHFLFFGLYPGTTYSFTIRASTAKGFGPPATNQFTTKISAPSMPAYELETPLNQTDNTVTVMLKPAHSRGAPVSVYQIVVEEERP RRTKKTTEILKCYPVPIHFQNASLLNSQYYFAAEFPADSLQAAQPFTIGDNKTYNGYWNTPLLPYKSYRIYFQAASRANGETKIDCVQVA >In-frame_PTPRM_ENST00000400060_chr18_8143777_+_ELP4_ENST00000395934_chr11_31804941_+_779aa MRGLGTCLATLAGLLLTAAGETFSGGCLFDEPYSTCGYSQSEGDDFNWEQVNTLTKPTSDPWMPSGSFMLVNASGRPEGQRAHLLLPQLK ENDTHCIDFHYFVSSKSNSPPGLLNVYVKVNNGPLGNPIWNISGDPTRTWNRAELAISTFWPNFYQVIFEVITSGHQGYLAIDEVKVLGH PCTRTPHFLRIQNVEVNAGQFATFQCSAIGRTVAGDRLWLQGIDVRDAPLKEIKVTSSRRFIASFNVVNTTKRDAGKYRCMIRTEGGVGI SNYAELVVKEPPVPIAPPQLASVGATYLWIQLNANSINGDGPIVAREVEYCTASGSWNDRQPVDSTSYKIGHLDPDTEYEISVLLTRPGE GGTGSPGPALRTRTKCADPMRGPRKLEVVEVKSRQITIRWEPFGYNVTRCHSYNLTVHYCYQVGGQEQVREEVSWDTENSHPQHTITNLS PYTNVSVKLILMNPEGRKESQELIVQTDEDLPGAVPTESIQGSTFEEKIFLQWREPTQTYGVITLYEITYKAVSSFDPEIDLSNQSGRVS KLGNETHFLFFGLYPGTTYSFTIRASTAKGFGPPATNQFTTKISAPSMPAYELETPLNQTDNTVTVMLKPAHSRGAPVSVYQIVVEEERP RRTKKTTEILKCYPVPIHFQNASLLNSQYYFAAEFPADSLQAAQPFTIGDNKTYNGYWNTPLLPYKSYRIYFQAASRANGETKIDCVQVA >In-frame_PTPRM_ENST00000400053_chr18_8143777_+_ELP4_ENST00000395934_chr11_31804941_+_717aa MPSGSFMLVNASGRPEGQRAHLLLPQLKENDTHCIDFHYFVSSKSNSPPGLLNVYVKVNNGPLGNPIWNISGDPTRTWNRAELAISTFWP NFYQVIFEVITSGHQGYLAIDEVKVLGHPCTRTPHFLRIQNVEVNAGQFATFQCSAIGRTVAGDRLWLQGIDVRDAPLKEIKVTSSRRFI ASFNVVNTTKRDAGKYRCMIRTEGGVGISNYAELVVKEPPVPIAPPQLASVGATYLWIQLNANSINGDGPIVAREVEYCTASGSWNDRQP VDSTSYKIGHLDPDTEYEISVLLTRPGEGGTGSPGPALRTRTKCADPMRGPRKLEVVEVKSRQITIRWEPFGYNVTRCHSYNLTVHYCYQ VGGQEQVREEVSWDTENSHPQHTITNLSPYTNVSVKLILMNPEGRKESQELIVQTDEDLPGAVPTESIQGSTFEEKIFLQWREPTQTYGV ITLYEITYKAVSSFDPEIDLSNQSGRVSKLGNETHFLFFGLYPGTTYSFTIRASTAKGFGPPATNQFTTKISAPSMPAYELETPLNQTDN TVTVMLKPAHSRGAPVSVYQIVVEEERPRRTKKTTEILKCYPVPIHFQNASLLNSQYYFAAEFPADSLQAAQPFTIGDNKTYNGYWNTPL >In-frame_PTPRM_ENST00000444013_chr18_8143777_+_ELP4_ENST00000395934_chr11_31804941_+_566aa MGTLSLHPGIDVRDAPLKEIKVTSSRRFIASFNVVNTTKRDAGKYRCMIRTEGGVGISNYAELVVKEPPVPIAPPQLASVGATYLWIQLN ANSINGDGPIVAREVEYCTASGSWNDRQPVDSTSYKIGHLDPDTEYEISVLLTRPGEGGTGSPGPALRTRTKCADPMRGPRKLEVVEVKS RQITIRWEPFGYNVTRCHSYNLTVHYCYQVGGQEQVREEVSWDTENSHPQHTITNLSPYTNVSVKLILMNPEGRKESQELIVQTDEDLPG AVPTESIQGSTFEEKIFLQWREPTQTYGVITLYEITYKAVSSFDPEIDLSNQSGRVSKLGNETHFLFFGLYPGTTYSFTIRASTAKGFGP PATNQFTTKISAPSMPAYELETPLNQTDNTVTVMLKPAHSRGAPVSVYQIVVEEERPRRTKKTTEILKCYPVPIHFQNASLLNSQYYFAA EFPADSLQAAQPFTIGDNKTYNGYWNTPLLPYKSYRIYFQAASRANGETKIDCVQVATKGAATPKPVPEPEKQTDHTVKIAGVIAGILLF |
* Fusion transcript sequences (only coding sequence (CDS) region). |
>In-frame_PTPRM_ENST00000580170_chr18_8143777_+_ELP4_ENST00000395934_chr11_31804941_+_2337nt ATGAGGGGACTTGGGACTTGCCTGGCGACTTTGGCCGGACTTTTGCTAACTGCGGCGGGCGAGACGTTCTCAGGTGGCTGCCTCTTTGAT GAGCCGTATAGCACATGTGGATATAGTCAATCTGAAGGTGATGACTTCAATTGGGAGCAAGTGAACACCTTGACTAAACCGACTTCTGAT CCATGGATGCCATCAGGTTCTTTCATGCTGGTGAATGCCTCTGGGAGACCTGAGGGGCAGAGAGCCCACCTGCTCTTACCCCAACTTAAA GAAAATGACACCCACTGCATCGATTTTCACTATTTTGTGTCCAGCAAGAGTAATTCTCCTCCGGGGTTACTCAATGTCTACGTGAAGGTC AATAACGGGCCACTGGGGAATCCTATCTGGAATATATCTGGAGACCCAACACGTACATGGAACAGGGCAGAACTGGCCATTAGTACTTTC TGGCCTAACTTTTATCAGGTGATTTTTGAAGTGATAACTTCTGGACATCAAGGCTATCTCGCTATCGATGAGGTGAAGGTGTTAGGACAT CCATGTACCAGGACTCCTCACTTCCTGCGGATTCAGAATGTGGAAGTTAATGCTGGCCAGTTTGCTACCTTCCAGTGCAGTGCCATCGGC AGGACCGTGGCAGGAGACAGGCTCTGGTTACAGGGCATTGATGTGCGAGATGCTCCTCTGAAGGAAATCAAGGTGACCAGCTCCCGACGC TTCATTGCTTCATTTAATGTTGTGAATACCACCAAACGAGATGCTGGAAAGTACCGCTGCATGATTCGCACTGAAGGAGGTGTTGGAATA TCAAACTATGCAGAGTTGGTAGTTAAAGAACCACCCGTTCCTATTGCCCCACCTCAGCTCGCCTCTGTAGGAGCCACCTACCTGTGGATA CAGCTCAACGCCAACTCCATCAATGGGGATGGGCCCATTGTGGCCCGAGAGGTGGAGTACTGCACGGCCAGTGGGAGCTGGAATGACCGG CAGCCAGTCGATTCCACGAGCTATAAAATTGGACACCTTGACCCAGATACAGAATATGAGATTAGTGTGCTCCTGACCAGGCCAGGGGAG GGTGGCACTGGCTCTCCTGGTCCAGCTCTCAGGACAAGAACAAAGTGTGCTGATCCCATGCGAGGCCCAAGAAAACTAGAAGTAGTGGAG GTCAAATCTCGGCAAATCACTATCCGCTGGGAGCCATTTGGATATAATGTAACTCGTTGCCACAGTTATAATCTCACTGTCCACTACTGT TACCAAGTTGGAGGACAAGAACAAGTGCGAGAAGAAGTAAGCTGGGATACAGAAAACTCACACCCTCAACACACGATCACTAACCTGTCA CCATACACCAATGTCAGTGTGAAACTGATCCTCATGAACCCAGAGGGCCGGAAGGAAAGCCAAGAACTCATAGTGCAGACAGATGAAGAC CTCCCAGGTGCTGTTCCCACTGAATCCATACAAGGAAGTACCTTTGAAGAGAAGATATTTCTTCAGTGGAGAGAACCAACTCAAACATAT GGTGTAATCACTTTATATGAGATCACCTACAAAGCAGTCAGTTCCTTTGACCCAGAAATAGATTTATCCAATCAGAGTGGAAGAGTTTCA AAGCTGGGAAATGAAACCCATTTTCTGTTTTTTGGACTGTATCCGGGGACCACATACTCCTTTACCATCCGAGCTAGCACAGCTAAGGGT TTTGGGCCTCCAGCAACAAACCAGTTCACCACCAAAATATCAGCACCCTCTATGCCAGCTTATGAACTTGAGACACCTTTGAATCAAACT GACAATACCGTGACAGTCATGCTGAAACCTGCCCACAGCAGAGGAGCACCTGTCAGTGTCTATCAAATAGTTGTTGAGGAAGAACGTCCT CGAAGAACTAAAAAGACGACAGAAATCTTAAAGTGCTACCCAGTGCCAATTCACTTCCAGAATGCTTCTCTGCTGAACTCACAGTACTAC TTTGCTGCAGAATTTCCTGCAGACAGCCTCCAAGCTGCGCAGCCTTTTACAATTGGTGATAATAAGACATATAATGGATACTGGAACACT CCCCTTCTCCCCTATAAAAGCTACAGAATTTATTTCCAAGCTGCTAGTAGAGCCAATGGGGAAACCAAAATAGACTGTGTCCAAGTGGCC ACAAAAGGAGCTGCCACTCCGAAACCAGTCCCAGAACCCGAGAAACAGACAGACCATACAGTTAAAATTGCTGGAGTCATCGCGGGCATC >In-frame_PTPRM_ENST00000332175_chr18_8143777_+_ELP4_ENST00000395934_chr11_31804941_+_2337nt ATGAGGGGACTTGGGACTTGCCTGGCGACTTTGGCCGGACTTTTGCTAACTGCGGCGGGCGAGACGTTCTCAGGTGGCTGCCTCTTTGAT GAGCCGTATAGCACATGTGGATATAGTCAATCTGAAGGTGATGACTTCAATTGGGAGCAAGTGAACACCTTGACTAAACCGACTTCTGAT CCATGGATGCCATCAGGTTCTTTCATGCTGGTGAATGCCTCTGGGAGACCTGAGGGGCAGAGAGCCCACCTGCTCTTACCCCAACTTAAA GAAAATGACACCCACTGCATCGATTTTCACTATTTTGTGTCCAGCAAGAGTAATTCTCCTCCGGGGTTACTCAATGTCTACGTGAAGGTC AATAACGGGCCACTGGGGAATCCTATCTGGAATATATCTGGAGACCCAACACGTACATGGAACAGGGCAGAACTGGCCATTAGTACTTTC TGGCCTAACTTTTATCAGGTGATTTTTGAAGTGATAACTTCTGGACATCAAGGCTATCTCGCTATCGATGAGGTGAAGGTGTTAGGACAT CCATGTACCAGGACTCCTCACTTCCTGCGGATTCAGAATGTGGAAGTTAATGCTGGCCAGTTTGCTACCTTCCAGTGCAGTGCCATCGGC AGGACCGTGGCAGGAGACAGGCTCTGGTTACAGGGCATTGATGTGCGAGATGCTCCTCTGAAGGAAATCAAGGTGACCAGCTCCCGACGC TTCATTGCTTCATTTAATGTTGTGAATACCACCAAACGAGATGCTGGAAAGTACCGCTGCATGATTCGCACTGAAGGAGGTGTTGGAATA TCAAACTATGCAGAGTTGGTAGTTAAAGAACCACCCGTTCCTATTGCCCCACCTCAGCTCGCCTCTGTAGGAGCCACCTACCTGTGGATA CAGCTCAACGCCAACTCCATCAATGGGGATGGGCCCATTGTGGCCCGAGAGGTGGAGTACTGCACGGCCAGTGGGAGCTGGAATGACCGG CAGCCAGTCGATTCCACGAGCTATAAAATTGGACACCTTGACCCAGATACAGAATATGAGATTAGTGTGCTCCTGACCAGGCCAGGGGAG GGTGGCACTGGCTCTCCTGGTCCAGCTCTCAGGACAAGAACAAAGTGTGCTGATCCCATGCGAGGCCCAAGAAAACTAGAAGTAGTGGAG GTCAAATCTCGGCAAATCACTATCCGCTGGGAGCCATTTGGATATAATGTAACTCGTTGCCACAGTTATAATCTCACTGTCCACTACTGT TACCAAGTTGGAGGACAAGAACAAGTGCGAGAAGAAGTAAGCTGGGATACAGAAAACTCACACCCTCAACACACGATCACTAACCTGTCA CCATACACCAATGTCAGTGTGAAACTGATCCTCATGAACCCAGAGGGCCGGAAGGAAAGCCAAGAACTCATAGTGCAGACAGATGAAGAC CTCCCAGGTGCTGTTCCCACTGAATCCATACAAGGAAGTACCTTTGAAGAGAAGATATTTCTTCAGTGGAGAGAACCAACTCAAACATAT GGTGTAATCACTTTATATGAGATCACCTACAAAGCAGTCAGTTCCTTTGACCCAGAAATAGATTTATCCAATCAGAGTGGAAGAGTTTCA AAGCTGGGAAATGAAACCCATTTTCTGTTTTTTGGACTGTATCCGGGGACCACATACTCCTTTACCATCCGAGCTAGCACAGCTAAGGGT TTTGGGCCTCCAGCAACAAACCAGTTCACCACCAAAATATCAGCACCCTCTATGCCAGCTTATGAACTTGAGACACCTTTGAATCAAACT GACAATACCGTGACAGTCATGCTGAAACCTGCCCACAGCAGAGGAGCACCTGTCAGTGTCTATCAAATAGTTGTTGAGGAAGAACGTCCT CGAAGAACTAAAAAGACGACAGAAATCTTAAAGTGCTACCCAGTGCCAATTCACTTCCAGAATGCTTCTCTGCTGAACTCACAGTACTAC TTTGCTGCAGAATTTCCTGCAGACAGCCTCCAAGCTGCGCAGCCTTTTACAATTGGTGATAATAAGACATATAATGGATACTGGAACACT CCCCTTCTCCCCTATAAAAGCTACAGAATTTATTTCCAAGCTGCTAGTAGAGCCAATGGGGAAACCAAAATAGACTGTGTCCAAGTGGCC ACAAAAGGAGCTGCCACTCCGAAACCAGTCCCAGAACCCGAGAAACAGACAGACCATACAGTTAAAATTGCTGGAGTCATCGCGGGCATC >In-frame_PTPRM_ENST00000400060_chr18_8143777_+_ELP4_ENST00000395934_chr11_31804941_+_2337nt ATGAGGGGACTTGGGACTTGCCTGGCGACTTTGGCCGGACTTTTGCTAACTGCGGCGGGCGAGACGTTCTCAGGTGGCTGCCTCTTTGAT GAGCCGTATAGCACATGTGGATATAGTCAATCTGAAGGTGATGACTTCAATTGGGAGCAAGTGAACACCTTGACTAAACCGACTTCTGAT CCATGGATGCCATCAGGTTCTTTCATGCTGGTGAATGCCTCTGGGAGACCTGAGGGGCAGAGAGCCCACCTGCTCTTACCCCAACTTAAA GAAAATGACACCCACTGCATCGATTTTCACTATTTTGTGTCCAGCAAGAGTAATTCTCCTCCGGGGTTACTCAATGTCTACGTGAAGGTC AATAACGGGCCACTGGGGAATCCTATCTGGAATATATCTGGAGACCCAACACGTACATGGAACAGGGCAGAACTGGCCATTAGTACTTTC TGGCCTAACTTTTATCAGGTGATTTTTGAAGTGATAACTTCTGGACATCAAGGCTATCTCGCTATCGATGAGGTGAAGGTGTTAGGACAT CCATGTACCAGGACTCCTCACTTCCTGCGGATTCAGAATGTGGAAGTTAATGCTGGCCAGTTTGCTACCTTCCAGTGCAGTGCCATCGGC AGGACCGTGGCAGGAGACAGGCTCTGGTTACAGGGCATTGATGTGCGAGATGCTCCTCTGAAGGAAATCAAGGTGACCAGCTCCCGACGC TTCATTGCTTCATTTAATGTTGTGAATACCACCAAACGAGATGCTGGAAAGTACCGCTGCATGATTCGCACTGAAGGAGGTGTTGGAATA TCAAACTATGCAGAGTTGGTAGTTAAAGAACCACCCGTTCCTATTGCCCCACCTCAGCTCGCCTCTGTAGGAGCCACCTACCTGTGGATA CAGCTCAACGCCAACTCCATCAATGGGGATGGGCCCATTGTGGCCCGAGAGGTGGAGTACTGCACGGCCAGTGGGAGCTGGAATGACCGG CAGCCAGTCGATTCCACGAGCTATAAAATTGGACACCTTGACCCAGATACAGAATATGAGATTAGTGTGCTCCTGACCAGGCCAGGGGAG GGTGGCACTGGCTCTCCTGGTCCAGCTCTCAGGACAAGAACAAAGTGTGCTGATCCCATGCGAGGCCCAAGAAAACTAGAAGTAGTGGAG GTCAAATCTCGGCAAATCACTATCCGCTGGGAGCCATTTGGATATAATGTAACTCGTTGCCACAGTTATAATCTCACTGTCCACTACTGT TACCAAGTTGGAGGACAAGAACAAGTGCGAGAAGAAGTAAGCTGGGATACAGAAAACTCACACCCTCAACACACGATCACTAACCTGTCA CCATACACCAATGTCAGTGTGAAACTGATCCTCATGAACCCAGAGGGCCGGAAGGAAAGCCAAGAACTCATAGTGCAGACAGATGAAGAC CTCCCAGGTGCTGTTCCCACTGAATCCATACAAGGAAGTACCTTTGAAGAGAAGATATTTCTTCAGTGGAGAGAACCAACTCAAACATAT GGTGTAATCACTTTATATGAGATCACCTACAAAGCAGTCAGTTCCTTTGACCCAGAAATAGATTTATCCAATCAGAGTGGAAGAGTTTCA AAGCTGGGAAATGAAACCCATTTTCTGTTTTTTGGACTGTATCCGGGGACCACATACTCCTTTACCATCCGAGCTAGCACAGCTAAGGGT TTTGGGCCTCCAGCAACAAACCAGTTCACCACCAAAATATCAGCACCCTCTATGCCAGCTTATGAACTTGAGACACCTTTGAATCAAACT GACAATACCGTGACAGTCATGCTGAAACCTGCCCACAGCAGAGGAGCACCTGTCAGTGTCTATCAAATAGTTGTTGAGGAAGAACGTCCT CGAAGAACTAAAAAGACGACAGAAATCTTAAAGTGCTACCCAGTGCCAATTCACTTCCAGAATGCTTCTCTGCTGAACTCACAGTACTAC TTTGCTGCAGAATTTCCTGCAGACAGCCTCCAAGCTGCGCAGCCTTTTACAATTGGTGATAATAAGACATATAATGGATACTGGAACACT CCCCTTCTCCCCTATAAAAGCTACAGAATTTATTTCCAAGCTGCTAGTAGAGCCAATGGGGAAACCAAAATAGACTGTGTCCAAGTGGCC ACAAAAGGAGCTGCCACTCCGAAACCAGTCCCAGAACCCGAGAAACAGACAGACCATACAGTTAAAATTGCTGGAGTCATCGCGGGCATC >In-frame_PTPRM_ENST00000400053_chr18_8143777_+_ELP4_ENST00000395934_chr11_31804941_+_2151nt ATGCCATCAGGTTCTTTCATGCTGGTGAATGCCTCTGGGAGACCTGAGGGGCAGAGAGCCCACCTGCTCTTACCCCAACTTAAAGAAAAT GACACCCACTGCATCGATTTTCACTATTTTGTGTCCAGCAAGAGTAATTCTCCTCCGGGGTTACTCAATGTCTACGTGAAGGTCAATAAC GGGCCACTGGGGAATCCTATCTGGAATATATCTGGAGACCCAACACGTACATGGAACAGGGCAGAACTGGCCATTAGTACTTTCTGGCCT AACTTTTATCAGGTGATTTTTGAAGTGATAACTTCTGGACATCAAGGCTATCTCGCTATCGATGAGGTGAAGGTGTTAGGACATCCATGT ACCAGGACTCCTCACTTCCTGCGGATTCAGAATGTGGAAGTTAATGCTGGCCAGTTTGCTACCTTCCAGTGCAGTGCCATCGGCAGGACC GTGGCAGGAGACAGGCTCTGGTTACAGGGCATTGATGTGCGAGATGCTCCTCTGAAGGAAATCAAGGTGACCAGCTCCCGACGCTTCATT GCTTCATTTAATGTTGTGAATACCACCAAACGAGATGCTGGAAAGTACCGCTGCATGATTCGCACTGAAGGAGGTGTTGGAATATCAAAC TATGCAGAGTTGGTAGTTAAAGAACCACCCGTTCCTATTGCCCCACCTCAGCTCGCCTCTGTAGGAGCCACCTACCTGTGGATACAGCTC AACGCCAACTCCATCAATGGGGATGGGCCCATTGTGGCCCGAGAGGTGGAGTACTGCACGGCCAGTGGGAGCTGGAATGACCGGCAGCCA GTCGATTCCACGAGCTATAAAATTGGACACCTTGACCCAGATACAGAATATGAGATTAGTGTGCTCCTGACCAGGCCAGGGGAGGGTGGC ACTGGCTCTCCTGGTCCAGCTCTCAGGACAAGAACAAAGTGTGCTGATCCCATGCGAGGCCCAAGAAAACTAGAAGTAGTGGAGGTCAAA TCTCGGCAAATCACTATCCGCTGGGAGCCATTTGGATATAATGTAACTCGTTGCCACAGTTATAATCTCACTGTCCACTACTGTTACCAA GTTGGAGGACAAGAACAAGTGCGAGAAGAAGTAAGCTGGGATACAGAAAACTCACACCCTCAACACACGATCACTAACCTGTCACCATAC ACCAATGTCAGTGTGAAACTGATCCTCATGAACCCAGAGGGCCGGAAGGAAAGCCAAGAACTCATAGTGCAGACAGATGAAGACCTCCCA GGTGCTGTTCCCACTGAATCCATACAAGGAAGTACCTTTGAAGAGAAGATATTTCTTCAGTGGAGAGAACCAACTCAAACATATGGTGTA ATCACTTTATATGAGATCACCTACAAAGCAGTCAGTTCCTTTGACCCAGAAATAGATTTATCCAATCAGAGTGGAAGAGTTTCAAAGCTG GGAAATGAAACCCATTTTCTGTTTTTTGGACTGTATCCGGGGACCACATACTCCTTTACCATCCGAGCTAGCACAGCTAAGGGTTTTGGG CCTCCAGCAACAAACCAGTTCACCACCAAAATATCAGCACCCTCTATGCCAGCTTATGAACTTGAGACACCTTTGAATCAAACTGACAAT ACCGTGACAGTCATGCTGAAACCTGCCCACAGCAGAGGAGCACCTGTCAGTGTCTATCAAATAGTTGTTGAGGAAGAACGTCCTCGAAGA ACTAAAAAGACGACAGAAATCTTAAAGTGCTACCCAGTGCCAATTCACTTCCAGAATGCTTCTCTGCTGAACTCACAGTACTACTTTGCT GCAGAATTTCCTGCAGACAGCCTCCAAGCTGCGCAGCCTTTTACAATTGGTGATAATAAGACATATAATGGATACTGGAACACTCCCCTT CTCCCCTATAAAAGCTACAGAATTTATTTCCAAGCTGCTAGTAGAGCCAATGGGGAAACCAAAATAGACTGTGTCCAAGTGGCCACAAAA GGAGCTGCCACTCCGAAACCAGTCCCAGAACCCGAGAAACAGACAGACCATACAGTTAAAATTGCTGGAGTCATCGCGGGCATCTTGCTG >In-frame_PTPRM_ENST00000444013_chr18_8143777_+_ELP4_ENST00000395934_chr11_31804941_+_1698nt ATGGGAACCCTCTCCCTCCATCCTGGCATTGATGTGCGAGATGCTCCTCTGAAGGAAATCAAGGTGACCAGCTCCCGACGCTTCATTGCT TCATTTAATGTTGTGAATACCACCAAACGAGATGCTGGAAAGTACCGCTGCATGATTCGCACTGAAGGAGGTGTTGGAATATCAAACTAT GCAGAGTTGGTAGTTAAAGAACCACCCGTTCCTATTGCCCCACCTCAGCTCGCCTCTGTAGGAGCCACCTACCTGTGGATACAGCTCAAC GCCAACTCCATCAATGGGGATGGGCCCATTGTGGCCCGAGAGGTGGAGTACTGCACGGCCAGTGGGAGCTGGAATGACCGGCAGCCAGTC GATTCCACGAGCTATAAAATTGGACACCTTGACCCAGATACAGAATATGAGATTAGTGTGCTCCTGACCAGGCCAGGGGAGGGTGGCACT GGCTCTCCTGGTCCAGCTCTCAGGACAAGAACAAAGTGTGCTGATCCCATGCGAGGCCCAAGAAAACTAGAAGTAGTGGAGGTCAAATCT CGGCAAATCACTATCCGCTGGGAGCCATTTGGATATAATGTAACTCGTTGCCACAGTTATAATCTCACTGTCCACTACTGTTACCAAGTT GGAGGACAAGAACAAGTGCGAGAAGAAGTAAGCTGGGATACAGAAAACTCACACCCTCAACACACGATCACTAACCTGTCACCATACACC AATGTCAGTGTGAAACTGATCCTCATGAACCCAGAGGGCCGGAAGGAAAGCCAAGAACTCATAGTGCAGACAGATGAAGACCTCCCAGGT GCTGTTCCCACTGAATCCATACAAGGAAGTACCTTTGAAGAGAAGATATTTCTTCAGTGGAGAGAACCAACTCAAACATATGGTGTAATC ACTTTATATGAGATCACCTACAAAGCAGTCAGTTCCTTTGACCCAGAAATAGATTTATCCAATCAGAGTGGAAGAGTTTCAAAGCTGGGA AATGAAACCCATTTTCTGTTTTTTGGACTGTATCCGGGGACCACATACTCCTTTACCATCCGAGCTAGCACAGCTAAGGGTTTTGGGCCT CCAGCAACAAACCAGTTCACCACCAAAATATCAGCACCCTCTATGCCAGCTTATGAACTTGAGACACCTTTGAATCAAACTGACAATACC GTGACAGTCATGCTGAAACCTGCCCACAGCAGAGGAGCACCTGTCAGTGTCTATCAAATAGTTGTTGAGGAAGAACGTCCTCGAAGAACT AAAAAGACGACAGAAATCTTAAAGTGCTACCCAGTGCCAATTCACTTCCAGAATGCTTCTCTGCTGAACTCACAGTACTACTTTGCTGCA GAATTTCCTGCAGACAGCCTCCAAGCTGCGCAGCCTTTTACAATTGGTGATAATAAGACATATAATGGATACTGGAACACTCCCCTTCTC CCCTATAAAAGCTACAGAATTTATTTCCAAGCTGCTAGTAGAGCCAATGGGGAAACCAAAATAGACTGTGTCCAAGTGGCCACAAAAGGA GCTGCCACTCCGAAACCAGTCCCAGAACCCGAGAAACAGACAGACCATACAGTTAAAATTGCTGGAGTCATCGCGGGCATCTTGCTGTTC |
* Fusion transcript sequences (Full-length transcript). |
>In-frame_PTPRM_ENST00000580170_chr18_8143777_+_ELP4_ENST00000395934_chr11_31804941_+_3720nt GCGGCGTAGAGAAGCTCGCAGCCCTCCGGAGCCTCAGCGATCTCCTGGCTCGCTTTTCCCGCAGCCGCCGAGCAGCGCAGGCCCGGCGAC TCCGGGTGCAGCTGGCCCTGTGCGGTGACATCGCCGTCCGGCGCCAGGCTCGAAGCCGCCTGGCCGCGCCCGCGGGGTCGCAGGCCGCTG GTCCCGCCCGGCCGCGCTCACAAACTACTCGCGGCTCGTGACCCGGGACAAACTTCTGGCGGCGGCGCAGCCTCTTCCACAGTCACCCTC CCCAGAGCCAGCTACCAAAATAGAAGACGCGGCCGGGGCGAGGAGGTGGGCGGGGGGAGCCCGGTGGCCGCTCCTCCCCGCGCGGCTGAC GCCCGCTTCGGCGGCGGTAGTGGCTGTGGCCGCGGGGCCGCCCCCAGCCGAGCTCCCGGAGGCGCTCGGGCGCGGGCCGGCGGGGCACGG GCGCTCACGCCCTCTAGCGGGCCGCGGCGGCGCCGGGCGGCCGTGACGTGAGCGCTCCCTTCAGCCGGCCTGCGGGGCACCGCCAGTCAG TCGGGGAGCAAGAGCCCCGCGCGCAGCCGGCGCGGGCTCGGTCATCGGCGCGCCGCCGCCCGGGGCTGGGCTTGGGGCTGCCTGTGGAGA GGCGGCGGGCGGAACGCGCGCGGCCACGGCCACGGCCACCGCCACGGCCACGGCCGGCAGCTCGGGTCCCGGGTCCCGGGCAGGGGAAGG GGAGAGGCGGCGAGCTCAGCAACCGGAACCGAGGGAAGATTTTGGCTCCGCGGGCTCGCCCTCCGCTCCCTCTGCCAGCGGCGCCAGACG CCGAGTGGGGCCAGGGACAGGGGAGGAGGACCCAGGACCCTGTGCCCGCGCCCCTGGAGCCGCTGGAGTTCGGACTTCTGCAACTGTTGG CACTTTGGGGGCTTGGCTTAGCGCTCTGCTGTTTACCCGTCTCTCCTCGCTGCCTCGGAACCAAAGCTCCCGGCCCCCTCCGCCCTCGCG CGCCCACCCACCGCCGCCGGGGAGCGGCCCGGCCCGCACTCAGCACCATGAGGGGACTTGGGACTTGCCTGGCGACTTTGGCCGGACTTT TGCTAACTGCGGCGGGCGAGACGTTCTCAGGTGGCTGCCTCTTTGATGAGCCGTATAGCACATGTGGATATAGTCAATCTGAAGGTGATG ACTTCAATTGGGAGCAAGTGAACACCTTGACTAAACCGACTTCTGATCCATGGATGCCATCAGGTTCTTTCATGCTGGTGAATGCCTCTG GGAGACCTGAGGGGCAGAGAGCCCACCTGCTCTTACCCCAACTTAAAGAAAATGACACCCACTGCATCGATTTTCACTATTTTGTGTCCA GCAAGAGTAATTCTCCTCCGGGGTTACTCAATGTCTACGTGAAGGTCAATAACGGGCCACTGGGGAATCCTATCTGGAATATATCTGGAG ACCCAACACGTACATGGAACAGGGCAGAACTGGCCATTAGTACTTTCTGGCCTAACTTTTATCAGGTGATTTTTGAAGTGATAACTTCTG GACATCAAGGCTATCTCGCTATCGATGAGGTGAAGGTGTTAGGACATCCATGTACCAGGACTCCTCACTTCCTGCGGATTCAGAATGTGG AAGTTAATGCTGGCCAGTTTGCTACCTTCCAGTGCAGTGCCATCGGCAGGACCGTGGCAGGAGACAGGCTCTGGTTACAGGGCATTGATG TGCGAGATGCTCCTCTGAAGGAAATCAAGGTGACCAGCTCCCGACGCTTCATTGCTTCATTTAATGTTGTGAATACCACCAAACGAGATG CTGGAAAGTACCGCTGCATGATTCGCACTGAAGGAGGTGTTGGAATATCAAACTATGCAGAGTTGGTAGTTAAAGAACCACCCGTTCCTA TTGCCCCACCTCAGCTCGCCTCTGTAGGAGCCACCTACCTGTGGATACAGCTCAACGCCAACTCCATCAATGGGGATGGGCCCATTGTGG CCCGAGAGGTGGAGTACTGCACGGCCAGTGGGAGCTGGAATGACCGGCAGCCAGTCGATTCCACGAGCTATAAAATTGGACACCTTGACC CAGATACAGAATATGAGATTAGTGTGCTCCTGACCAGGCCAGGGGAGGGTGGCACTGGCTCTCCTGGTCCAGCTCTCAGGACAAGAACAA AGTGTGCTGATCCCATGCGAGGCCCAAGAAAACTAGAAGTAGTGGAGGTCAAATCTCGGCAAATCACTATCCGCTGGGAGCCATTTGGAT ATAATGTAACTCGTTGCCACAGTTATAATCTCACTGTCCACTACTGTTACCAAGTTGGAGGACAAGAACAAGTGCGAGAAGAAGTAAGCT GGGATACAGAAAACTCACACCCTCAACACACGATCACTAACCTGTCACCATACACCAATGTCAGTGTGAAACTGATCCTCATGAACCCAG AGGGCCGGAAGGAAAGCCAAGAACTCATAGTGCAGACAGATGAAGACCTCCCAGGTGCTGTTCCCACTGAATCCATACAAGGAAGTACCT TTGAAGAGAAGATATTTCTTCAGTGGAGAGAACCAACTCAAACATATGGTGTAATCACTTTATATGAGATCACCTACAAAGCAGTCAGTT CCTTTGACCCAGAAATAGATTTATCCAATCAGAGTGGAAGAGTTTCAAAGCTGGGAAATGAAACCCATTTTCTGTTTTTTGGACTGTATC CGGGGACCACATACTCCTTTACCATCCGAGCTAGCACAGCTAAGGGTTTTGGGCCTCCAGCAACAAACCAGTTCACCACCAAAATATCAG CACCCTCTATGCCAGCTTATGAACTTGAGACACCTTTGAATCAAACTGACAATACCGTGACAGTCATGCTGAAACCTGCCCACAGCAGAG GAGCACCTGTCAGTGTCTATCAAATAGTTGTTGAGGAAGAACGTCCTCGAAGAACTAAAAAGACGACAGAAATCTTAAAGTGCTACCCAG TGCCAATTCACTTCCAGAATGCTTCTCTGCTGAACTCACAGTACTACTTTGCTGCAGAATTTCCTGCAGACAGCCTCCAAGCTGCGCAGC CTTTTACAATTGGTGATAATAAGACATATAATGGATACTGGAACACTCCCCTTCTCCCCTATAAAAGCTACAGAATTTATTTCCAAGCTG CTAGTAGAGCCAATGGGGAAACCAAAATAGACTGTGTCCAAGTGGCCACAAAAGGAGCTGCCACTCCGAAACCAGTCCCAGAACCCGAGA AACAGACAGACCATACAGTTAAAATTGCTGGAGTCATCGCGGGCATCTTGCTGTTCGTGATTATATTTCTTGGAGTTGTGTTGGTAATGA AGAAAAGCGACTGCATTTGCCTCCAGACTTGTCAGACACAGTGAGCCGCTCAAGCAAAATGGATCTGGCAGAATCCGCCAAGCGGCTGGG CCCAGGCTGTGGCATGATGGCCGGAGGCAAGAAGCACCTGGACTTCTAGGGATTCCTCCTTAGTCGCTGCATGCAGAATTCTATGACACT CTAATTATGATTGCTAATAGCTTATGTAAATATTTTTCTTAACAATTTGACCCTCCACTCCTTGAAAAACACAGGATTATAAAATGGTGC CGCCATTTCTCATTTTTTAACTTTTTACAGAACTAGCACAGCAGAAATACTTTTAAATTTTTCCTTCATGCTCTAGAGAAAATAATTTTA >In-frame_PTPRM_ENST00000332175_chr18_8143777_+_ELP4_ENST00000395934_chr11_31804941_+_3720nt GCGGCGTAGAGAAGCTCGCAGCCCTCCGGAGCCTCAGCGATCTCCTGGCTCGCTTTTCCCGCAGCCGCCGAGCAGCGCAGGCCCGGCGAC TCCGGGTGCAGCTGGCCCTGTGCGGTGACATCGCCGTCCGGCGCCAGGCTCGAAGCCGCCTGGCCGCGCCCGCGGGGTCGCAGGCCGCTG GTCCCGCCCGGCCGCGCTCACAAACTACTCGCGGCTCGTGACCCGGGACAAACTTCTGGCGGCGGCGCAGCCTCTTCCACAGTCACCCTC CCCAGAGCCAGCTACCAAAATAGAAGACGCGGCCGGGGCGAGGAGGTGGGCGGGGGGAGCCCGGTGGCCGCTCCTCCCCGCGCGGCTGAC GCCCGCTTCGGCGGCGGTAGTGGCTGTGGCCGCGGGGCCGCCCCCAGCCGAGCTCCCGGAGGCGCTCGGGCGCGGGCCGGCGGGGCACGG GCGCTCACGCCCTCTAGCGGGCCGCGGCGGCGCCGGGCGGCCGTGACGTGAGCGCTCCCTTCAGCCGGCCTGCGGGGCACCGCCAGTCAG TCGGGGAGCAAGAGCCCCGCGCGCAGCCGGCGCGGGCTCGGTCATCGGCGCGCCGCCGCCCGGGGCTGGGCTTGGGGCTGCCTGTGGAGA GGCGGCGGGCGGAACGCGCGCGGCCACGGCCACGGCCACCGCCACGGCCACGGCCGGCAGCTCGGGTCCCGGGTCCCGGGCAGGGGAAGG GGAGAGGCGGCGAGCTCAGCAACCGGAACCGAGGGAAGATTTTGGCTCCGCGGGCTCGCCCTCCGCTCCCTCTGCCAGCGGCGCCAGACG CCGAGTGGGGCCAGGGACAGGGGAGGAGGACCCAGGACCCTGTGCCCGCGCCCCTGGAGCCGCTGGAGTTCGGACTTCTGCAACTGTTGG CACTTTGGGGGCTTGGCTTAGCGCTCTGCTGTTTACCCGTCTCTCCTCGCTGCCTCGGAACCAAAGCTCCCGGCCCCCTCCGCCCTCGCG CGCCCACCCACCGCCGCCGGGGAGCGGCCCGGCCCGCACTCAGCACCATGAGGGGACTTGGGACTTGCCTGGCGACTTTGGCCGGACTTT TGCTAACTGCGGCGGGCGAGACGTTCTCAGGTGGCTGCCTCTTTGATGAGCCGTATAGCACATGTGGATATAGTCAATCTGAAGGTGATG ACTTCAATTGGGAGCAAGTGAACACCTTGACTAAACCGACTTCTGATCCATGGATGCCATCAGGTTCTTTCATGCTGGTGAATGCCTCTG GGAGACCTGAGGGGCAGAGAGCCCACCTGCTCTTACCCCAACTTAAAGAAAATGACACCCACTGCATCGATTTTCACTATTTTGTGTCCA GCAAGAGTAATTCTCCTCCGGGGTTACTCAATGTCTACGTGAAGGTCAATAACGGGCCACTGGGGAATCCTATCTGGAATATATCTGGAG ACCCAACACGTACATGGAACAGGGCAGAACTGGCCATTAGTACTTTCTGGCCTAACTTTTATCAGGTGATTTTTGAAGTGATAACTTCTG GACATCAAGGCTATCTCGCTATCGATGAGGTGAAGGTGTTAGGACATCCATGTACCAGGACTCCTCACTTCCTGCGGATTCAGAATGTGG AAGTTAATGCTGGCCAGTTTGCTACCTTCCAGTGCAGTGCCATCGGCAGGACCGTGGCAGGAGACAGGCTCTGGTTACAGGGCATTGATG TGCGAGATGCTCCTCTGAAGGAAATCAAGGTGACCAGCTCCCGACGCTTCATTGCTTCATTTAATGTTGTGAATACCACCAAACGAGATG CTGGAAAGTACCGCTGCATGATTCGCACTGAAGGAGGTGTTGGAATATCAAACTATGCAGAGTTGGTAGTTAAAGAACCACCCGTTCCTA TTGCCCCACCTCAGCTCGCCTCTGTAGGAGCCACCTACCTGTGGATACAGCTCAACGCCAACTCCATCAATGGGGATGGGCCCATTGTGG CCCGAGAGGTGGAGTACTGCACGGCCAGTGGGAGCTGGAATGACCGGCAGCCAGTCGATTCCACGAGCTATAAAATTGGACACCTTGACC CAGATACAGAATATGAGATTAGTGTGCTCCTGACCAGGCCAGGGGAGGGTGGCACTGGCTCTCCTGGTCCAGCTCTCAGGACAAGAACAA AGTGTGCTGATCCCATGCGAGGCCCAAGAAAACTAGAAGTAGTGGAGGTCAAATCTCGGCAAATCACTATCCGCTGGGAGCCATTTGGAT ATAATGTAACTCGTTGCCACAGTTATAATCTCACTGTCCACTACTGTTACCAAGTTGGAGGACAAGAACAAGTGCGAGAAGAAGTAAGCT GGGATACAGAAAACTCACACCCTCAACACACGATCACTAACCTGTCACCATACACCAATGTCAGTGTGAAACTGATCCTCATGAACCCAG AGGGCCGGAAGGAAAGCCAAGAACTCATAGTGCAGACAGATGAAGACCTCCCAGGTGCTGTTCCCACTGAATCCATACAAGGAAGTACCT TTGAAGAGAAGATATTTCTTCAGTGGAGAGAACCAACTCAAACATATGGTGTAATCACTTTATATGAGATCACCTACAAAGCAGTCAGTT CCTTTGACCCAGAAATAGATTTATCCAATCAGAGTGGAAGAGTTTCAAAGCTGGGAAATGAAACCCATTTTCTGTTTTTTGGACTGTATC CGGGGACCACATACTCCTTTACCATCCGAGCTAGCACAGCTAAGGGTTTTGGGCCTCCAGCAACAAACCAGTTCACCACCAAAATATCAG CACCCTCTATGCCAGCTTATGAACTTGAGACACCTTTGAATCAAACTGACAATACCGTGACAGTCATGCTGAAACCTGCCCACAGCAGAG GAGCACCTGTCAGTGTCTATCAAATAGTTGTTGAGGAAGAACGTCCTCGAAGAACTAAAAAGACGACAGAAATCTTAAAGTGCTACCCAG TGCCAATTCACTTCCAGAATGCTTCTCTGCTGAACTCACAGTACTACTTTGCTGCAGAATTTCCTGCAGACAGCCTCCAAGCTGCGCAGC CTTTTACAATTGGTGATAATAAGACATATAATGGATACTGGAACACTCCCCTTCTCCCCTATAAAAGCTACAGAATTTATTTCCAAGCTG CTAGTAGAGCCAATGGGGAAACCAAAATAGACTGTGTCCAAGTGGCCACAAAAGGAGCTGCCACTCCGAAACCAGTCCCAGAACCCGAGA AACAGACAGACCATACAGTTAAAATTGCTGGAGTCATCGCGGGCATCTTGCTGTTCGTGATTATATTTCTTGGAGTTGTGTTGGTAATGA AGAAAAGCGACTGCATTTGCCTCCAGACTTGTCAGACACAGTGAGCCGCTCAAGCAAAATGGATCTGGCAGAATCCGCCAAGCGGCTGGG CCCAGGCTGTGGCATGATGGCCGGAGGCAAGAAGCACCTGGACTTCTAGGGATTCCTCCTTAGTCGCTGCATGCAGAATTCTATGACACT CTAATTATGATTGCTAATAGCTTATGTAAATATTTTTCTTAACAATTTGACCCTCCACTCCTTGAAAAACACAGGATTATAAAATGGTGC CGCCATTTCTCATTTTTTAACTTTTTACAGAACTAGCACAGCAGAAATACTTTTAAATTTTTCCTTCATGCTCTAGAGAAAATAATTTTA >In-frame_PTPRM_ENST00000400060_chr18_8143777_+_ELP4_ENST00000395934_chr11_31804941_+_2683nt ATGAGGGGACTTGGGACTTGCCTGGCGACTTTGGCCGGACTTTTGCTAACTGCGGCGGGCGAGACGTTCTCAGGTGGCTGCCTCTTTGAT GAGCCGTATAGCACATGTGGATATAGTCAATCTGAAGGTGATGACTTCAATTGGGAGCAAGTGAACACCTTGACTAAACCGACTTCTGAT CCATGGATGCCATCAGGTTCTTTCATGCTGGTGAATGCCTCTGGGAGACCTGAGGGGCAGAGAGCCCACCTGCTCTTACCCCAACTTAAA GAAAATGACACCCACTGCATCGATTTTCACTATTTTGTGTCCAGCAAGAGTAATTCTCCTCCGGGGTTACTCAATGTCTACGTGAAGGTC AATAACGGGCCACTGGGGAATCCTATCTGGAATATATCTGGAGACCCAACACGTACATGGAACAGGGCAGAACTGGCCATTAGTACTTTC TGGCCTAACTTTTATCAGGTGATTTTTGAAGTGATAACTTCTGGACATCAAGGCTATCTCGCTATCGATGAGGTGAAGGTGTTAGGACAT CCATGTACCAGGACTCCTCACTTCCTGCGGATTCAGAATGTGGAAGTTAATGCTGGCCAGTTTGCTACCTTCCAGTGCAGTGCCATCGGC AGGACCGTGGCAGGAGACAGGCTCTGGTTACAGGGCATTGATGTGCGAGATGCTCCTCTGAAGGAAATCAAGGTGACCAGCTCCCGACGC TTCATTGCTTCATTTAATGTTGTGAATACCACCAAACGAGATGCTGGAAAGTACCGCTGCATGATTCGCACTGAAGGAGGTGTTGGAATA TCAAACTATGCAGAGTTGGTAGTTAAAGAACCACCCGTTCCTATTGCCCCACCTCAGCTCGCCTCTGTAGGAGCCACCTACCTGTGGATA CAGCTCAACGCCAACTCCATCAATGGGGATGGGCCCATTGTGGCCCGAGAGGTGGAGTACTGCACGGCCAGTGGGAGCTGGAATGACCGG CAGCCAGTCGATTCCACGAGCTATAAAATTGGACACCTTGACCCAGATACAGAATATGAGATTAGTGTGCTCCTGACCAGGCCAGGGGAG GGTGGCACTGGCTCTCCTGGTCCAGCTCTCAGGACAAGAACAAAGTGTGCTGATCCCATGCGAGGCCCAAGAAAACTAGAAGTAGTGGAG GTCAAATCTCGGCAAATCACTATCCGCTGGGAGCCATTTGGATATAATGTAACTCGTTGCCACAGTTATAATCTCACTGTCCACTACTGT TACCAAGTTGGAGGACAAGAACAAGTGCGAGAAGAAGTAAGCTGGGATACAGAAAACTCACACCCTCAACACACGATCACTAACCTGTCA CCATACACCAATGTCAGTGTGAAACTGATCCTCATGAACCCAGAGGGCCGGAAGGAAAGCCAAGAACTCATAGTGCAGACAGATGAAGAC CTCCCAGGTGCTGTTCCCACTGAATCCATACAAGGAAGTACCTTTGAAGAGAAGATATTTCTTCAGTGGAGAGAACCAACTCAAACATAT GGTGTAATCACTTTATATGAGATCACCTACAAAGCAGTCAGTTCCTTTGACCCAGAAATAGATTTATCCAATCAGAGTGGAAGAGTTTCA AAGCTGGGAAATGAAACCCATTTTCTGTTTTTTGGACTGTATCCGGGGACCACATACTCCTTTACCATCCGAGCTAGCACAGCTAAGGGT TTTGGGCCTCCAGCAACAAACCAGTTCACCACCAAAATATCAGCACCCTCTATGCCAGCTTATGAACTTGAGACACCTTTGAATCAAACT GACAATACCGTGACAGTCATGCTGAAACCTGCCCACAGCAGAGGAGCACCTGTCAGTGTCTATCAAATAGTTGTTGAGGAAGAACGTCCT CGAAGAACTAAAAAGACGACAGAAATCTTAAAGTGCTACCCAGTGCCAATTCACTTCCAGAATGCTTCTCTGCTGAACTCACAGTACTAC TTTGCTGCAGAATTTCCTGCAGACAGCCTCCAAGCTGCGCAGCCTTTTACAATTGGTGATAATAAGACATATAATGGATACTGGAACACT CCCCTTCTCCCCTATAAAAGCTACAGAATTTATTTCCAAGCTGCTAGTAGAGCCAATGGGGAAACCAAAATAGACTGTGTCCAAGTGGCC ACAAAAGGAGCTGCCACTCCGAAACCAGTCCCAGAACCCGAGAAACAGACAGACCATACAGTTAAAATTGCTGGAGTCATCGCGGGCATC TTGCTGTTCGTGATTATATTTCTTGGAGTTGTGTTGGTAATGAAGAAAAGCGACTGCATTTGCCTCCAGACTTGTCAGACACAGTGAGCC GCTCAAGCAAAATGGATCTGGCAGAATCCGCCAAGCGGCTGGGCCCAGGCTGTGGCATGATGGCCGGAGGCAAGAAGCACCTGGACTTCT AGGGATTCCTCCTTAGTCGCTGCATGCAGAATTCTATGACACTCTAATTATGATTGCTAATAGCTTATGTAAATATTTTTCTTAACAATT TGACCCTCCACTCCTTGAAAAACACAGGATTATAAAATGGTGCCGCCATTTCTCATTTTTTAACTTTTTACAGAACTAGCACAGCAGAAA >In-frame_PTPRM_ENST00000400053_chr18_8143777_+_ELP4_ENST00000395934_chr11_31804941_+_2922nt GTGCTGTGGCCCAATCCTGTGCGTGTCTCCTCTTCAGGCTCCTGCCGGAGCATGCTTCTCTAATCTTACCATTTATCACTGACCCTTCGG TGAAACTCTCTTCTGTTTAAATTTACCAGGGTACACTTTGTAATACTTGGGACCAAGAATTTGAAGATAGTAATCAGACAAATCAAACAA CTAGTAGTAGTGGAGAGACACGTAGCCCTACAGGAAGGGGTAGAATTATCATTAAAAACACAGACAAACCAGAGACTGCCTGAAAAAAAA AAAAAGATGAACTGGAAAGATTCAAAGTAGGCTCTATTGGAGGTGGCTGCCTCTTTGATGAGCCGTATAGCACATGTGGATATAGTCAAT CTGAAGGTGATGACTTCAATTGGGAGCAAGTGAACACCTTGACTAAACCGACTTCTGATCCATGGATGCCATCAGGTTCTTTCATGCTGG TGAATGCCTCTGGGAGACCTGAGGGGCAGAGAGCCCACCTGCTCTTACCCCAACTTAAAGAAAATGACACCCACTGCATCGATTTTCACT ATTTTGTGTCCAGCAAGAGTAATTCTCCTCCGGGGTTACTCAATGTCTACGTGAAGGTCAATAACGGGCCACTGGGGAATCCTATCTGGA ATATATCTGGAGACCCAACACGTACATGGAACAGGGCAGAACTGGCCATTAGTACTTTCTGGCCTAACTTTTATCAGGTGATTTTTGAAG TGATAACTTCTGGACATCAAGGCTATCTCGCTATCGATGAGGTGAAGGTGTTAGGACATCCATGTACCAGGACTCCTCACTTCCTGCGGA TTCAGAATGTGGAAGTTAATGCTGGCCAGTTTGCTACCTTCCAGTGCAGTGCCATCGGCAGGACCGTGGCAGGAGACAGGCTCTGGTTAC AGGGCATTGATGTGCGAGATGCTCCTCTGAAGGAAATCAAGGTGACCAGCTCCCGACGCTTCATTGCTTCATTTAATGTTGTGAATACCA CCAAACGAGATGCTGGAAAGTACCGCTGCATGATTCGCACTGAAGGAGGTGTTGGAATATCAAACTATGCAGAGTTGGTAGTTAAAGAAC CACCCGTTCCTATTGCCCCACCTCAGCTCGCCTCTGTAGGAGCCACCTACCTGTGGATACAGCTCAACGCCAACTCCATCAATGGGGATG GGCCCATTGTGGCCCGAGAGGTGGAGTACTGCACGGCCAGTGGGAGCTGGAATGACCGGCAGCCAGTCGATTCCACGAGCTATAAAATTG GACACCTTGACCCAGATACAGAATATGAGATTAGTGTGCTCCTGACCAGGCCAGGGGAGGGTGGCACTGGCTCTCCTGGTCCAGCTCTCA GGACAAGAACAAAGTGTGCTGATCCCATGCGAGGCCCAAGAAAACTAGAAGTAGTGGAGGTCAAATCTCGGCAAATCACTATCCGCTGGG AGCCATTTGGATATAATGTAACTCGTTGCCACAGTTATAATCTCACTGTCCACTACTGTTACCAAGTTGGAGGACAAGAACAAGTGCGAG AAGAAGTAAGCTGGGATACAGAAAACTCACACCCTCAACACACGATCACTAACCTGTCACCATACACCAATGTCAGTGTGAAACTGATCC TCATGAACCCAGAGGGCCGGAAGGAAAGCCAAGAACTCATAGTGCAGACAGATGAAGACCTCCCAGGTGCTGTTCCCACTGAATCCATAC AAGGAAGTACCTTTGAAGAGAAGATATTTCTTCAGTGGAGAGAACCAACTCAAACATATGGTGTAATCACTTTATATGAGATCACCTACA AAGCAGTCAGTTCCTTTGACCCAGAAATAGATTTATCCAATCAGAGTGGAAGAGTTTCAAAGCTGGGAAATGAAACCCATTTTCTGTTTT TTGGACTGTATCCGGGGACCACATACTCCTTTACCATCCGAGCTAGCACAGCTAAGGGTTTTGGGCCTCCAGCAACAAACCAGTTCACCA CCAAAATATCAGCACCCTCTATGCCAGCTTATGAACTTGAGACACCTTTGAATCAAACTGACAATACCGTGACAGTCATGCTGAAACCTG CCCACAGCAGAGGAGCACCTGTCAGTGTCTATCAAATAGTTGTTGAGGAAGAACGTCCTCGAAGAACTAAAAAGACGACAGAAATCTTAA AGTGCTACCCAGTGCCAATTCACTTCCAGAATGCTTCTCTGCTGAACTCACAGTACTACTTTGCTGCAGAATTTCCTGCAGACAGCCTCC AAGCTGCGCAGCCTTTTACAATTGGTGATAATAAGACATATAATGGATACTGGAACACTCCCCTTCTCCCCTATAAAAGCTACAGAATTT ATTTCCAAGCTGCTAGTAGAGCCAATGGGGAAACCAAAATAGACTGTGTCCAAGTGGCCACAAAAGGAGCTGCCACTCCGAAACCAGTCC CAGAACCCGAGAAACAGACAGACCATACAGTTAAAATTGCTGGAGTCATCGCGGGCATCTTGCTGTTCGTGATTATATTTCTTGGAGTTG TGTTGGTAATGAAGAAAAGCGACTGCATTTGCCTCCAGACTTGTCAGACACAGTGAGCCGCTCAAGCAAAATGGATCTGGCAGAATCCGC CAAGCGGCTGGGCCCAGGCTGTGGCATGATGGCCGGAGGCAAGAAGCACCTGGACTTCTAGGGATTCCTCCTTAGTCGCTGCATGCAGAA TTCTATGACACTCTAATTATGATTGCTAATAGCTTATGTAAATATTTTTCTTAACAATTTGACCCTCCACTCCTTGAAAAACACAGGATT ATAAAATGGTGCCGCCATTTCTCATTTTTTAACTTTTTACAGAACTAGCACAGCAGAAATACTTTTAAATTTTTCCTTCATGCTCTAGAG >In-frame_PTPRM_ENST00000444013_chr18_8143777_+_ELP4_ENST00000395934_chr11_31804941_+_2044nt ATGGGAACCCTCTCCCTCCATCCTGGCATTGATGTGCGAGATGCTCCTCTGAAGGAAATCAAGGTGACCAGCTCCCGACGCTTCATTGCT TCATTTAATGTTGTGAATACCACCAAACGAGATGCTGGAAAGTACCGCTGCATGATTCGCACTGAAGGAGGTGTTGGAATATCAAACTAT GCAGAGTTGGTAGTTAAAGAACCACCCGTTCCTATTGCCCCACCTCAGCTCGCCTCTGTAGGAGCCACCTACCTGTGGATACAGCTCAAC GCCAACTCCATCAATGGGGATGGGCCCATTGTGGCCCGAGAGGTGGAGTACTGCACGGCCAGTGGGAGCTGGAATGACCGGCAGCCAGTC GATTCCACGAGCTATAAAATTGGACACCTTGACCCAGATACAGAATATGAGATTAGTGTGCTCCTGACCAGGCCAGGGGAGGGTGGCACT GGCTCTCCTGGTCCAGCTCTCAGGACAAGAACAAAGTGTGCTGATCCCATGCGAGGCCCAAGAAAACTAGAAGTAGTGGAGGTCAAATCT CGGCAAATCACTATCCGCTGGGAGCCATTTGGATATAATGTAACTCGTTGCCACAGTTATAATCTCACTGTCCACTACTGTTACCAAGTT GGAGGACAAGAACAAGTGCGAGAAGAAGTAAGCTGGGATACAGAAAACTCACACCCTCAACACACGATCACTAACCTGTCACCATACACC AATGTCAGTGTGAAACTGATCCTCATGAACCCAGAGGGCCGGAAGGAAAGCCAAGAACTCATAGTGCAGACAGATGAAGACCTCCCAGGT GCTGTTCCCACTGAATCCATACAAGGAAGTACCTTTGAAGAGAAGATATTTCTTCAGTGGAGAGAACCAACTCAAACATATGGTGTAATC ACTTTATATGAGATCACCTACAAAGCAGTCAGTTCCTTTGACCCAGAAATAGATTTATCCAATCAGAGTGGAAGAGTTTCAAAGCTGGGA AATGAAACCCATTTTCTGTTTTTTGGACTGTATCCGGGGACCACATACTCCTTTACCATCCGAGCTAGCACAGCTAAGGGTTTTGGGCCT CCAGCAACAAACCAGTTCACCACCAAAATATCAGCACCCTCTATGCCAGCTTATGAACTTGAGACACCTTTGAATCAAACTGACAATACC GTGACAGTCATGCTGAAACCTGCCCACAGCAGAGGAGCACCTGTCAGTGTCTATCAAATAGTTGTTGAGGAAGAACGTCCTCGAAGAACT AAAAAGACGACAGAAATCTTAAAGTGCTACCCAGTGCCAATTCACTTCCAGAATGCTTCTCTGCTGAACTCACAGTACTACTTTGCTGCA GAATTTCCTGCAGACAGCCTCCAAGCTGCGCAGCCTTTTACAATTGGTGATAATAAGACATATAATGGATACTGGAACACTCCCCTTCTC CCCTATAAAAGCTACAGAATTTATTTCCAAGCTGCTAGTAGAGCCAATGGGGAAACCAAAATAGACTGTGTCCAAGTGGCCACAAAAGGA GCTGCCACTCCGAAACCAGTCCCAGAACCCGAGAAACAGACAGACCATACAGTTAAAATTGCTGGAGTCATCGCGGGCATCTTGCTGTTC GTGATTATATTTCTTGGAGTTGTGTTGGTAATGAAGAAAAGCGACTGCATTTGCCTCCAGACTTGTCAGACACAGTGAGCCGCTCAAGCA AAATGGATCTGGCAGAATCCGCCAAGCGGCTGGGCCCAGGCTGTGGCATGATGGCCGGAGGCAAGAAGCACCTGGACTTCTAGGGATTCC TCCTTAGTCGCTGCATGCAGAATTCTATGACACTCTAATTATGATTGCTAATAGCTTATGTAAATATTTTTCTTAACAATTTGACCCTCC ACTCCTTGAAAAACACAGGATTATAAAATGGTGCCGCCATTTCTCATTTTTTAACTTTTTACAGAACTAGCACAGCAGAAATACTTTTAA |
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FusionGenePPI for PTPRM_ELP4 |
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Hgene | Hgene's interactors | Tgene | Tgene's interactors |
PTPRM | GNB2L1, CTNND1, DTNBP1, LMTK2, EHD4, CDC42BPA, NHSL1, TRIM25 | ELP4 | IKBKAP, ELP2, ELP3, HINFP, PPP1CC, CBX6, MMS19, SRP68, FAM96B, CIAO1, SHMT2, ELP6, PIPOX, SF3B3, ID2, CDH1, EGFR |
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Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Still interaction with |
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Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Interaction lost with |
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Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Interaction lost with |
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RelatedDrugs for PTPRM_ELP4 |
![]() (DrugBank Version 5.1.0 2018-04-02) |
Partner | Gene | UniProtAcc | DrugBank ID | Drug name | Drug activity | Drug type | Drug status |
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RelatedDiseases for PTPRM_ELP4 |
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Partner | Gene | Disease ID | Disease name | # pubmeds | Source |