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Fusion gene ID: 29459 |
FusionGeneSummary for PTPN4_GRID1 |
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Fusion gene information | Fusion gene name: PTPN4_GRID1 | Fusion gene ID: 29459 | Hgene | Tgene | Gene symbol | PTPN4 | GRID1 | Gene ID | 5775 | 2894 |
Gene name | protein tyrosine phosphatase, non-receptor type 4 | glutamate ionotropic receptor delta type subunit 1 | |
Synonyms | MEG|PTPMEG|PTPMEG1 | GluD1 | |
Cytomap | 2q14.2 | 10q23.1-q23.2 | |
Type of gene | protein-coding | protein-coding | |
Description | tyrosine-protein phosphatase non-receptor type 4PTPase-MEG1megakaryocyte phosphatasemegakaryocyte protein-tyrosine phosphataseprotein tyrosine phosphatase MEG1protein tyrosine phosphatase, non-receptor type 4 (megakaryocyte) | glutamate receptor ionotropic, delta-1gluR delta-1 subunitglutamate receptor delta-1 subunit | |
Modification date | 20180519 | 20180523 | |
UniProtAcc | P29074 | Q9ULK0 | |
Ensembl transtripts involved in fusion gene | ENST00000263708, ENST00000544261, ENST00000460162, | ENST00000327946, ENST00000536331, ENST00000552278, | |
Fusion gene scores | * DoF score | 4 X 3 X 3=36 | 9 X 6 X 8=432 |
# samples | 4 | 9 | |
** MAII score | log2(4/36*10)=0.15200309344505 effective Gene in Pan-Cancer Fusion Genes (eGinPCFGs). DoF>8 and MAII>0 | log2(9/432*10)=-2.26303440583379 possibly effective Gene in Pan-Cancer Fusion Genes (peGinPCFGs). DoF>8 and MAII<0 | |
Context | PubMed: PTPN4 [Title/Abstract] AND GRID1 [Title/Abstract] AND fusion [Title/Abstract] | ||
Functional or gene categories assigned by FusionGDB annotation |
* DoF score (Degree of Frequency) = # partners X # break points X # cancer types ** MAII score (Major Active Isofusion Index) = log2(# samples/DoF score*10) |
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Partner | Gene | GO ID | GO term | PubMed ID |
![]() (ChiTars (NAR, 2018), tumorfusions (NAR, 2018), Gao et al. (Cell, 2018)) * All genome coordinats were lifted-over on hg19. * Click on the break point to see the gene structure around the break point region using the UCSC Genome Browser. |
Data type | Source | Cancer type | Sample | Hgene | Hchr | Hbp | Hstrand | Tgene | Tchr | Tbp | Tstrand |
TCGA | RV | LUSC | TCGA-NC-A5HM-01A | PTPN4 | chr2 | 120567567 | + | GRID1 | chr10 | 87489371 | - |
* LD: Li Ding group's fusion gene list RV: Roel Verhaak group's fusion gene list ChiTaRs fusion database |
![]() * Click on the break point to see the gene structure around the break point region using the UCSC Genome Browser. |
ORF | Henst | Tenst | Hgene | Hchr | Hbp | Hstrand | Tgene | Tchr | Tbp | Tstrand |
In-frame | ENST00000263708 | ENST00000327946 | PTPN4 | chr2 | 120567567 | + | GRID1 | chr10 | 87489371 | - |
5CDS-5UTR | ENST00000263708 | ENST00000536331 | PTPN4 | chr2 | 120567567 | + | GRID1 | chr10 | 87489371 | - |
5CDS-intron | ENST00000263708 | ENST00000552278 | PTPN4 | chr2 | 120567567 | + | GRID1 | chr10 | 87489371 | - |
intron-3CDS | ENST00000544261 | ENST00000327946 | PTPN4 | chr2 | 120567567 | + | GRID1 | chr10 | 87489371 | - |
intron-5UTR | ENST00000544261 | ENST00000536331 | PTPN4 | chr2 | 120567567 | + | GRID1 | chr10 | 87489371 | - |
intron-intron | ENST00000544261 | ENST00000552278 | PTPN4 | chr2 | 120567567 | + | GRID1 | chr10 | 87489371 | - |
intron-3CDS | ENST00000460162 | ENST00000327946 | PTPN4 | chr2 | 120567567 | + | GRID1 | chr10 | 87489371 | - |
intron-5UTR | ENST00000460162 | ENST00000536331 | PTPN4 | chr2 | 120567567 | + | GRID1 | chr10 | 87489371 | - |
intron-intron | ENST00000460162 | ENST00000552278 | PTPN4 | chr2 | 120567567 | + | GRID1 | chr10 | 87489371 | - |
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FusionProtFeatures for PTPN4_GRID1 |
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Hgene | Tgene |
PTPN4 | GRID1 |
May act at junctions between the membrane and thecytoskeleton. | Receptor for glutamate. L-glutamate acts as anexcitatory neurotransmitter at many synapses in the centralnervous system. The postsynaptic actions of Glu are mediated by avariety of receptors that are named according to their selectiveagonists. |
![]() * Minus value of BPloci means that the break pointn is located before the CDS. |
- In-frame and retained protein feature among the 13 regional features. |
Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Protein feature | Protein feature note |
Tgene | >GRID1 | chr2:120567567 | chr10:87489371 | ENST00000327946 | - | 7 | 16 | 584_637 | 411 | 1010 | Topological domain | Cytoplasmic |
Tgene | >GRID1 | chr2:120567567 | chr10:87489371 | ENST00000327946 | - | 7 | 16 | 659_830 | 411 | 1010 | Topological domain | Extracellular |
Tgene | >GRID1 | chr2:120567567 | chr10:87489371 | ENST00000327946 | - | 7 | 16 | 852_1009 | 411 | 1010 | Topological domain | Cytoplasmic |
Tgene | >GRID1 | chr2:120567567 | chr10:87489371 | ENST00000327946 | - | 7 | 16 | 563_583 | 411 | 1010 | Transmembrane | Helical |
Tgene | >GRID1 | chr2:120567567 | chr10:87489371 | ENST00000327946 | - | 7 | 16 | 638_658 | 411 | 1010 | Transmembrane | Helical |
Tgene | >GRID1 | chr2:120567567 | chr10:87489371 | ENST00000327946 | - | 7 | 16 | 831_851 | 411 | 1010 | Transmembrane | Helical |
- In-frame and not-retained protein feature among the 13 regional features. |
Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Protein feature | Protein feature note |
Hgene | >PTPN4 | chr2:120567567 | chr10:87489371 | ENST00000263708 | + | 2 | 27 | 29_312 | 46 | 927 | Domain | FERM |
Hgene | >PTPN4 | chr2:120567567 | chr10:87489371 | ENST00000263708 | + | 2 | 27 | 517_589 | 46 | 927 | Domain | PDZ |
Hgene | >PTPN4 | chr2:120567567 | chr10:87489371 | ENST00000263708 | + | 2 | 27 | 655_911 | 46 | 927 | Domain | Tyrosine-protein phosphatase |
Hgene | >PTPN4 | chr2:120567567 | chr10:87489371 | ENST00000263708 | + | 2 | 27 | 852_858 | 46 | 927 | Region | Substrate binding |
Tgene | GRID1 | chr2:120567567 | chr10:87489371 | ENST00000327946 | - | 7 | 16 | 21_562 | 411 | 1010 | Topological domain | Extracellular |
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FusionGeneSequence for PTPN4_GRID1 |
![]() (nt: nucleotides, aa: amino acids) |
* Fusion amino acid sequences. |
>In-frame_PTPN4_ENST00000263708_chr2_120567567_+_GRID1_ENST00000327946_chr10_87489371_-_645aa MTSRFRLPAGRTYNVRASELARDRQHTEVVCNILLLDNTVQAFKVNLATWDSEKGLNGSLQERPMGSRLQGLTLKVVTVLEEPFVMVAEN ILGQPKRYKGFSIDVLDALAKALGFKYEIYQAPDGRYGHQLHNTSWNGMIGELISKRADLAISAITITPERESVVDFSKRYMDYSVGILI KKPEEKISIFSLFAPFDFAVWACIAAAIPVVGVLIFVLNRIQAVRAQSAAQPRPSASATLHSAIWIVYGAFVQQGGESSVNSMAMRIVMG SWWLFTLIVCSSYTANLAAFLTVSRMDNPIRTFQDLSKQVEMSYGTVRDSAVYEYFRAKGTNPLEQDSTFAELWRTISKNGGADNCVSSP SEGIRKAKKGNYAFLWDVAVVEYAALTDDDCSVTVIGNSISSKGYGIALQHGSPYRDLFSQRILELQDTGDLDVLKQKWWPHMGRCDLTS HASAQADGKSLKLHSFAGVFCILAIGLLLACLVAALELWWNSNRCHQETPKEDKEVNLEQVHRRMNSLMDEDIAHKQISPASIELSALEM GGLAPTQTLEPTREYQNTQLSVSTFLPEQSSHGTSRTLSSGPSSNLPLPLSSSATMPSMQCKHRSPNGGLFRQSPVKTPIPMSFQPVPGG |
* Fusion transcript sequences (only coding sequence (CDS) region). |
>In-frame_PTPN4_ENST00000263708_chr2_120567567_+_GRID1_ENST00000327946_chr10_87489371_-_1935nt ATGACCTCACGTTTCCGATTGCCTGCTGGCAGAACCTACAATGTACGAGCATCAGAGTTGGCCCGAGACAGACAGCATACTGAAGTGGTT TGCAACATCCTTCTTCTGGATAACACTGTACAAGCTTTCAAAGTCAATTTGGCGACATGGGACTCAGAGAAGGGCTTGAATGGCAGCTTG CAAGAGAGGCCCATGGGCAGCCGCCTCCAAGGATTGACTCTTAAAGTGGTGACTGTCTTGGAAGAGCCTTTCGTGATGGTGGCTGAGAAC ATCCTAGGACAGCCCAAGCGCTACAAAGGGTTCTCCATAGATGTCCTGGATGCACTGGCCAAGGCTCTGGGCTTTAAATATGAGATTTAC CAAGCCCCTGATGGCAGGTACGGTCACCAGCTCCATAACACCTCCTGGAACGGGATGATCGGGGAGCTCATCAGCAAGAGAGCAGACTTG GCCATCTCTGCCATCACCATCACCCCAGAGAGGGAGAGCGTTGTGGACTTCAGCAAGCGGTACATGGACTATTCAGTGGGGATTCTAATT AAGAAGCCCGAGGAGAAAATCAGCATCTTCTCCCTCTTTGCTCCATTTGATTTCGCTGTGTGGGCCTGCATTGCAGCAGCCATCCCTGTG GTTGGTGTGCTGATATTTGTGTTGAACAGGATACAGGCTGTGAGGGCTCAGAGTGCTGCCCAGCCCAGGCCGTCAGCTTCTGCCACTCTG CACAGCGCCATCTGGATTGTCTATGGAGCCTTCGTACAGCAAGGTGGCGAATCTTCCGTGAACTCCATGGCCATGCGCATCGTGATGGGC AGCTGGTGGCTCTTCACGCTCATTGTGTGCTCCTCCTACACAGCCAACCTTGCTGCCTTCCTCACAGTGTCCAGGATGGACAACCCCATA AGGACTTTCCAGGACCTGTCCAAACAAGTGGAAATGTCTTATGGCACTGTCCGGGATTCTGCTGTATATGAGTACTTCCGAGCCAAGGGC ACCAACCCCCTGGAGCAGGACAGCACGTTTGCTGAACTCTGGCGGACCATCAGCAAGAACGGAGGGGCTGACAACTGCGTGTCCAGTCCT TCAGAAGGCATCAGGAAGGCAAAGAAGGGGAACTACGCCTTCCTGTGGGATGTGGCCGTGGTGGAATACGCAGCCCTGACGGATGACGAC TGCTCGGTGACTGTCATCGGCAACAGCATCAGCAGCAAGGGTTACGGGATTGCCCTGCAGCATGGCAGCCCCTACAGGGACCTCTTCTCC CAGAGGATCCTGGAGCTGCAGGACACAGGGGACCTGGATGTGCTGAAGCAGAAGTGGTGGCCGCACATGGGCCGCTGTGACCTCACCAGC CATGCCAGCGCCCAGGCCGACGGCAAATCCCTCAAGCTGCACAGCTTCGCCGGGGTCTTCTGCATCCTGGCCATTGGCCTGCTCCTGGCC TGCCTGGTGGCTGCCCTGGAGTTGTGGTGGAACAGCAACCGGTGCCACCAGGAGACCCCCAAGGAGGACAAAGAAGTGAACTTGGAGCAG GTCCACCGGCGCATGAACAGCCTCATGGATGAAGACATTGCTCACAAGCAGATTTCCCCAGCGTCGATTGAGCTCTCGGCCCTGGAGATG GGGGGCCTGGCTCCCACCCAGACCTTGGAGCCGACACGGGAGTACCAGAACACCCAGCTCTCGGTCAGCACCTTTCTGCCAGAGCAGAGC AGCCATGGCACCAGCCGGACACTCTCATCAGGGCCCAGCAGCAACCTGCCGCTGCCGCTGAGCAGCTCGGCGACCATGCCCTCCATGCAG TGCAAACACAGGTCACCCAACGGGGGGCTGTTCCGGCAGAGCCCGGTGAAGACCCCCATCCCCATGTCCTTCCAGCCCGTGCCTGGAGGC |
* Fusion transcript sequences (Full-length transcript). |
>In-frame_PTPN4_ENST00000263708_chr2_120567567_+_GRID1_ENST00000327946_chr10_87489371_-_5424nt CCTGCGTGTCCCTCTGCGCTCCGACTGGTGCGACTTCTCCCTGCGCTAGCGAGGCAGGGTTTTGGCCTCGCCTCTCGCGAGATCGCCTCC TGTTGCTGCCGCCGCCGCTCCTGGCCACTGACTGGCGGCGCCTGCGCAGCCGCCATGTTCGGTTGCTATGCTGCGGCCTAGGAGAGGGGG TGTGCTTGAGGGAGGAGGAAGAGATAGAGGAGGAGGAGGGGGAGGAAGAGGAGGTGGAGAAGGAGGGGGGTGACTGAGCTCCTCTTGCAC TCTCACACACAAACGCTGCCCAGGATTACCCGCCAGCTCACGCCGCGCAGTGCGCTTTTCCGCTCCTCGCGCCCCACCACCAACATTGTT CTCTCAGGACTCCTGGGTCCCAGGGGCCGGAATTGGGCCTGAGCGGGAGAGGAAAGAGACTTGGCTTTGGCCGCGGGGTCGGAGGATTGG GGCCAGGCCCCCTCCCCCACGCACTTTTGGGGGTGTGGATTATCTCATCCCTGCAGGGAGGTAGGAGAGGTCGCCGGCTGCCCGCCTCCC TGCCACCTCCCCAGCGGCGCCGGCCCGCGGCTGCCCAGCAGCATGAGGTGGTGCTGGCGGCTCCGGGTCGTGGCGCGACCGCTGCGGCGG CGGCTGCTCGGGGGGCGCTGAGGTAGCCCCCCGGAGCGGCACGGAGGACGCGCTTCTCCTCTGCGCGCCGGGGCCTCGAGGCTTTTTTTC TCCAGCCGAGAGGACGCGGCTGTGATATACGAAGACTTTGTGTGGACAGTAATGACCTCACGTTTCCGATTGCCTGCTGGCAGAACCTAC AATGTACGAGCATCAGAGTTGGCCCGAGACAGACAGCATACTGAAGTGGTTTGCAACATCCTTCTTCTGGATAACACTGTACAAGCTTTC AAAGTCAATTTGGCGACATGGGACTCAGAGAAGGGCTTGAATGGCAGCTTGCAAGAGAGGCCCATGGGCAGCCGCCTCCAAGGATTGACT CTTAAAGTGGTGACTGTCTTGGAAGAGCCTTTCGTGATGGTGGCTGAGAACATCCTAGGACAGCCCAAGCGCTACAAAGGGTTCTCCATA GATGTCCTGGATGCACTGGCCAAGGCTCTGGGCTTTAAATATGAGATTTACCAAGCCCCTGATGGCAGGTACGGTCACCAGCTCCATAAC ACCTCCTGGAACGGGATGATCGGGGAGCTCATCAGCAAGAGAGCAGACTTGGCCATCTCTGCCATCACCATCACCCCAGAGAGGGAGAGC GTTGTGGACTTCAGCAAGCGGTACATGGACTATTCAGTGGGGATTCTAATTAAGAAGCCCGAGGAGAAAATCAGCATCTTCTCCCTCTTT GCTCCATTTGATTTCGCTGTGTGGGCCTGCATTGCAGCAGCCATCCCTGTGGTTGGTGTGCTGATATTTGTGTTGAACAGGATACAGGCT GTGAGGGCTCAGAGTGCTGCCCAGCCCAGGCCGTCAGCTTCTGCCACTCTGCACAGCGCCATCTGGATTGTCTATGGAGCCTTCGTACAG CAAGGTGGCGAATCTTCCGTGAACTCCATGGCCATGCGCATCGTGATGGGCAGCTGGTGGCTCTTCACGCTCATTGTGTGCTCCTCCTAC ACAGCCAACCTTGCTGCCTTCCTCACAGTGTCCAGGATGGACAACCCCATAAGGACTTTCCAGGACCTGTCCAAACAAGTGGAAATGTCT TATGGCACTGTCCGGGATTCTGCTGTATATGAGTACTTCCGAGCCAAGGGCACCAACCCCCTGGAGCAGGACAGCACGTTTGCTGAACTC TGGCGGACCATCAGCAAGAACGGAGGGGCTGACAACTGCGTGTCCAGTCCTTCAGAAGGCATCAGGAAGGCAAAGAAGGGGAACTACGCC TTCCTGTGGGATGTGGCCGTGGTGGAATACGCAGCCCTGACGGATGACGACTGCTCGGTGACTGTCATCGGCAACAGCATCAGCAGCAAG GGTTACGGGATTGCCCTGCAGCATGGCAGCCCCTACAGGGACCTCTTCTCCCAGAGGATCCTGGAGCTGCAGGACACAGGGGACCTGGAT GTGCTGAAGCAGAAGTGGTGGCCGCACATGGGCCGCTGTGACCTCACCAGCCATGCCAGCGCCCAGGCCGACGGCAAATCCCTCAAGCTG CACAGCTTCGCCGGGGTCTTCTGCATCCTGGCCATTGGCCTGCTCCTGGCCTGCCTGGTGGCTGCCCTGGAGTTGTGGTGGAACAGCAAC CGGTGCCACCAGGAGACCCCCAAGGAGGACAAAGAAGTGAACTTGGAGCAGGTCCACCGGCGCATGAACAGCCTCATGGATGAAGACATT GCTCACAAGCAGATTTCCCCAGCGTCGATTGAGCTCTCGGCCCTGGAGATGGGGGGCCTGGCTCCCACCCAGACCTTGGAGCCGACACGG GAGTACCAGAACACCCAGCTCTCGGTCAGCACCTTTCTGCCAGAGCAGAGCAGCCATGGCACCAGCCGGACACTCTCATCAGGGCCCAGC AGCAACCTGCCGCTGCCGCTGAGCAGCTCGGCGACCATGCCCTCCATGCAGTGCAAACACAGGTCACCCAACGGGGGGCTGTTCCGGCAG AGCCCGGTGAAGACCCCCATCCCCATGTCCTTCCAGCCCGTGCCTGGAGGCGTCCTTCCAGAGGCTCTGGACACCTCCCACGGGACCTCC ATCTGACTGCGCCGCCTGCCCTCCTGCCCACCCTCCCACCCACCCGACCAGCAGAGCTTTTTAATACAAGAAAACAACAACACAAACCAC ACACACTCGCACACACACACATACACAGAGACTCTTTCATTTTTCTTGTACATATGTGTAAATAATGACAGAATGGAGTGGGGTAAAAGT GTATTTTGAATATTCCCAATTTTCGAAGTCAGTAAAAAAACACAAAAACTGTATGAATGACTTTGTAAATTTTGTTCTATATGAATAAAA AGGCAAATTACTTGTGATCATTCTGAAGTGCCAAAGGAGCCCCCCCATTCCTGGGCCTTTCTGAGGGCAGGAGGGGCGACCAGATAAGGA GCCCCTCTCTGCTGGGGGAGAAGGGAAGACGAGGAACCCCACATGCCACTCGCTGCCTTGTCCCACAGCTTGCTGCCCCATTTCTTTGCT CCTGGCACCTCGTCCCTTTTAGTCCCTCAGCTTGATAAAGAGTGAGTTTGGAGCCCGCATTGGGCTGGCCCACTGGGTTGCTGTGCTGTA GGGTGATCGGCTGTTCTGGGTAGCCTGGGGCTGAGGAGGTGCCCTGGACTCAGGGCTATCCTGTCCTGTCTTGGATCTTGCGGGACGAGT TAGTCACCGCTGTGTGTGTTGCAGTGTGCCTCTGCCCCATGGGCCCGAGAGAAGCTGACAATTACCCATAGTGAGGTAATTGAGGGCTTT GATACTGAGCTGTTCTCATATCATACTGTTGGCCTTGTTTTTCATTTTCTTTTCAAAATTAGAAGAATCAAAAAGTGATAGAATATTGGG GGAAGGAGGGCAGACTCCATCGTTTCCTCAGGGAGACTGGGCGGAGGTGGGGTTGGTCTGGAAGAAGGTCCATGGGGGCAGGGAGTTGCG AGGTGGGGTTAGTTGCATGGACCAGGTGAGGTGGTGGAACAAAAGGCCAGGTAGAGGAAGAATATTCCCTTGGGTTTGGACCCATGGTCC CAGGTGAGAGAAGGAAGTGAGGCCATAGATGCAGGGAGTAGAAGCTTTGTGGTGTCAGGCAAACGGACTCTGTTAGTAAGAGTTGGGGGA GGTGCCCAGGTGGGTGGACCAGTACTCCAGGTGATGGGGCATGCTGAGAAATAGAGAAAAGAGACCATGTTTATTTGGGTAGGAGGAAGC CTTGCCTTGCGCCTTAGGTGAGAAGCATAAGTGTAACTCCCATCCACCAGGGAAGTTGCTTGTAGCCCCAAAAGTAAAGGCCTATCTCTG GGTCATAAATCCTGCAGGCAGTCCAACAAACAGGGCTGGCTCCAGCACAAACTCTCCCTTCCACCTTTACGACCCTCTCCAGACCAGACC TGGAGTCCTCTTCAAGCAGCAATCCAACCCAGAGCAGGGGCCCTCCCCACTCAGGCATCTGATAACCTCTGAGATTTCCAGGCCTATCCC TGTGCAGGTACAGCTGCAGGGAAGCCCAGTTTTCTAAGCCTAGGACCACCTAACAGCGCCCCCTCCTTCAGTTGCCCTTTCTGAGGCAAC TAAACTACAGAATCAGGGAAAGAACCATTAGGAGTGGAACTGGGGGAATCTGAGTTGTGTCACTTCAGTTCCTCTCCTAAAGACAAAGGT TAGTCTGATCTCCAGACCCGTCAGAATGGAATACACAGCCCACATCTGTCACTGAAGGAGGTGGAGCTCCCACAGCCAGCAGTAATCAGG GAGCTGAGAGCCTGGTTCTGTGATCATGGAGAAATACAAAGTCCTATTGATTGCTTCTTCTATAGCCTTGTAGAGTTTCTAGAGAGATGT ATTTATGAGGGTGATAACTAGCCCAGGATTGATTTCTTTCCTAAAGTCCCTAGTGACATGATTGAGCAGTAAAGAACGGCCAAATCACAC AGTCAGCTAAAAGCACTGTGGGGAAGAGAGTGTTTATAATTATGTTATTTATTGCTGGATGCTGAGAATGGTCTGATATTCGTGCTACCT AGGCAATCCATTGACATTTCTCCAATCAGAGCATGTGGACCTTGGAGCCAGGCATGCTCAGAGAAGCCTAGGTGGGCTACCATGACCCCG AGGAAGAGCAGGCTTTGTTTTCCATCAGCACGTTGGGGGCCCTGCCCTGAATGGTCAATTTTTCACATATATATCTCTCTATTTTTTTAA TCAAACTCTGGTCTCACTGCCTTATCTCACACCAACTCTGTTTCCTCATTGCCCCCTGAGATGGCCTGTCTTCTGGGGTATAGCTTGGAT GTCTTCTTGGATGGTTCTGCTTAGAATGAGTGTCAAGGAGGAAAGAGAGGGAGATGGAGGATGTGTTTGTGCGCCTGTGTGTGTGTGTTT GTGTGTGTGTGTGTGTGTGAGAGAGAGAGAGAGAGAGAGAGAGACCAGCATCTTCAAGAGAAGTATTCTGCTTATACAAAATCCTTAACA CCTCATGGTGTTATTCTTCACCATGTTTATATATATATATATATATTTTTTTTTTTTTTTAGAATTTTCTACCCTTGGCATGAGGGGAAA TGATTGATATTCAAGCAAGTTCTCTAGGAAAAAAAAAAACTTCCCAACTCAGATTTCTGTGTCAGCTCAGAATGTATCTTTTTTTCATGC TTTGCTCTTTGGATTTATAACTCTGTTTAGACTATTCCATACATTTTAGGTATATTTTGTGCCTTCAGACACTGCAAATAATAATCAGCA |
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FusionGenePPI for PTPN4_GRID1 |
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Hgene | Hgene's interactors | Tgene | Tgene's interactors |
PTPN4 | ZZEF1, ATRX, LPL, KAT5, EEF1A1, EEF1G, GRID2, GRIN2A, MGMT, TK1, CRK, KCTD17, ADH5, CADM1, GOLIM4, LTBP1, MPP7, PAK4, PEX19, SHKBP1, SNRPD1, YWHAG, YWHAH, YWHAQ, YWHAZ, PTPN4, CRKL, C18orf25, UNC13B, CSNK2A1, CSNK2A2, SIRT1, YWHAB | GRID1 | DEF6, EGFR, TCTN2, HTR3A, HBB |
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Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Still interaction with |
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Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Interaction lost with |
Tgene | GRID1 | chr2:120567567 | chr10:87489371 | ENST00000327946 | - | 7 | 16 | 21_436 | 411 | 1010 | CBLN1 |
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Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Interaction lost with |
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RelatedDrugs for PTPN4_GRID1 |
![]() (DrugBank Version 5.1.0 2018-04-02) |
Partner | Gene | UniProtAcc | DrugBank ID | Drug name | Drug activity | Drug type | Drug status |
Hgene | PTPN4 | P29074 | DB00630 | Alendronic acid | Tyrosine-protein phosphatase non-receptor type 4 | small molecule | approved |
Tgene | GRID1 | Q9ULK0 | DB00142 | Glutamic Acid | Glutamate receptor ionotropic, delta-1 | small molecule | approved|nutraceutical |
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RelatedDiseases for PTPN4_GRID1 |
![]() (DisGeNet 4.0) |
Partner | Gene | Disease ID | Disease name | # pubmeds | Source |
Tgene | GRID1 | C0036341 | Schizophrenia | 5 | PSYGENET |
Tgene | GRID1 | C0011570 | Mental Depression | 3 | PSYGENET |
Tgene | GRID1 | C0011581 | Depressive disorder | 3 | PSYGENET |
Tgene | GRID1 | C0005586 | Bipolar Disorder | 1 | PSYGENET |
Tgene | GRID1 | C0009404 | Colorectal Neoplasms | 1 | CTD_human |