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Fusion gene ID: 27844 |
FusionGeneSummary for PNO1_SHROOM3 |
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Fusion gene information | Fusion gene name: PNO1_SHROOM3 | Fusion gene ID: 27844 | Hgene | Tgene | Gene symbol | PNO1 | SHROOM3 | Gene ID | 56902 | 57619 |
Gene name | partner of NOB1 homolog | shroom family member 3 | |
Synonyms | KHRBP1|RRP20 | APXL3|MSTP013|SHRM|ShrmL | |
Cytomap | 2p14 | 4q21.1 | |
Type of gene | protein-coding | protein-coding | |
Description | RNA-binding protein PNO1KH-type RNA-binding protein 1RNA binding protein | protein Shroom3F-actin-binding proteinshroom-related protein | |
Modification date | 20180523 | 20180523 | |
UniProtAcc | Q9NRX1 | Q8TF72 | |
Ensembl transtripts involved in fusion gene | ENST00000263657, | ENST00000296043, ENST00000473602, | |
Fusion gene scores | * DoF score | 2 X 2 X 2=8 | 6 X 3 X 4=72 |
# samples | 2 | 7 | |
** MAII score | log2(2/8*10)=1.32192809488736 | log2(7/72*10)=-0.0406419844973459 possibly effective Gene in Pan-Cancer Fusion Genes (peGinPCFGs). DoF>8 and MAII<0 | |
Context | PubMed: PNO1 [Title/Abstract] AND SHROOM3 [Title/Abstract] AND fusion [Title/Abstract] | ||
Functional or gene categories assigned by FusionGDB annotation |
* DoF score (Degree of Frequency) = # partners X # break points X # cancer types ** MAII score (Major Active Isofusion Index) = log2(# samples/DoF score*10) |
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Partner | Gene | GO ID | GO term | PubMed ID |
![]() (ChiTars (NAR, 2018), tumorfusions (NAR, 2018), Gao et al. (Cell, 2018)) * All genome coordinats were lifted-over on hg19. * Click on the break point to see the gene structure around the break point region using the UCSC Genome Browser. |
Data type | Source | Cancer type | Sample | Hgene | Hchr | Hbp | Hstrand | Tgene | Tchr | Tbp | Tstrand |
TCGA | LD | LUSC | TCGA-85-8072-01A | PNO1 | chr2 | 68385661 | + | SHROOM3 | chr4 | 77476762 | + |
* LD: Li Ding group's fusion gene list RV: Roel Verhaak group's fusion gene list ChiTaRs fusion database |
![]() * Click on the break point to see the gene structure around the break point region using the UCSC Genome Browser. |
ORF | Henst | Tenst | Hgene | Hchr | Hbp | Hstrand | Tgene | Tchr | Tbp | Tstrand |
In-frame | ENST00000263657 | ENST00000296043 | PNO1 | chr2 | 68385661 | + | SHROOM3 | chr4 | 77476762 | + |
5CDS-intron | ENST00000263657 | ENST00000473602 | PNO1 | chr2 | 68385661 | + | SHROOM3 | chr4 | 77476762 | + |
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FusionProtFeatures for PNO1_SHROOM3 |
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Hgene | Tgene |
PNO1 | SHROOM3 |
Positively regulates dimethylation of two adjacentadenosines in the loop of a conserved hairpin near the 3'-end of18S rRNA (PubMed:25851604). {ECO:0000269|PubMed:25851604}. | Controls cell shape changes in the neuroepitheliumduring neural tube closure. Induces apical constriction inepithelial cells by promoting the apical accumulation of F-actinand myosin II, and probably by bundling stress fibers. Inducesapicobasal cell elongation by redistributing gamma-tubulin anddirecting the assembly of robust apicobasal microtubule arrays (Bysimilarity). {ECO:0000250}. |
![]() * Minus value of BPloci means that the break pointn is located before the CDS. |
- In-frame and retained protein feature among the 13 regional features. |
Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Protein feature | Protein feature note |
Tgene | >SHROOM3 | chr2:68385661 | chr4:77476762 | ENST00000296043 | + | 0 | 11 | 1669_1957 | 56 | 1997 | Domain | ASD2 |
Tgene | >SHROOM3 | chr2:68385661 | chr4:77476762 | ENST00000296043 | + | 0 | 11 | 928_1030 | 56 | 1997 | Domain | ASD1 |
- In-frame and not-retained protein feature among the 13 regional features. |
Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Protein feature | Protein feature note |
Hgene | >PNO1 | chr2:68385661 | chr4:77476762 | ENST00000263657 | + | 2 | 7 | 173_225 | 119 | 253 | Domain | Note=KH |
Tgene | SHROOM3 | chr2:68385661 | chr4:77476762 | ENST00000296043 | + | 0 | 11 | 25_110 | 56 | 1997 | Domain | PDZ |
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FusionGeneSequence for PNO1_SHROOM3 |
![]() (nt: nucleotides, aa: amino acids) |
* Fusion amino acid sequences. |
>In-frame_PNO1_ENST00000263657_chr2_68385661_+_SHROOM3_ENST00000296043_chr4_77476762_+_2060aa MESEMETQSARAEEGFTQVTRKGGRRAKKRQAEQLSAAGEGGDAGRMDTEEARPAKRPVFPPLCGDGLLSGKEETRKIPVPANRYTPLKE NWMKIFTPIVEHLGLQIRFNLKSRNVEIRVEEGGKADTLSSKLQAGDEVVHINEVTLSSSRKEAVSLVKGSYKTLRLVVRRDVCTDPGHA DTGASNFVSPEHLTSGPQHRKAAWSGGVKLRLKHRRSEPAGRPHSWHTTKSGEKQPDASMMQISQGMIGPPWHQSYHSSSSTSDLSNYDH AYLRRSPDQCSSQGSMESLEPSGAYPPCHLSPAKSTGSIDQLSHFHNKRDSAYSSFSTSSSILEYPHPGISGRERSGSMDNTSARGGLLE GMRQADIRYVKTVYDTRRGVSAEYEVNSSALLLQGREARASANGQGYDKWSNIPRGKGVPPPSWSQQCPSSLETATDNLPPKVGAPLPPA RSDSYAAFRHRERPSSWSSLDQKRLCRPQANSLGSLKSPFIEEQLHTVLEKSPENSPPVKPKHNYTQKAQPGQPLLPTSIYPVPSLEPHF AQVPQPSVSSNGMLYPALAKESGYIAPQGACNKMATIDENGNQNGSGRPGFAFCQPLEHDLLSPVEKKPEATAKYVPSKVHFCSVPENEE DASLKRHLTPPQGNSPHSNERKSTHSNKPSSHPHSLKCPQAQAWQAGEDKRSSRLSEPWEGDFQEDHNANLWRRLEREGLGQSLSGNFGK TKSAFSSLQNIPESLRRHSSLELGRGTQEGYPGGRPTCAVNTKAEDPGRKAAPDLGSHLDRQVSYPRPEGRTGASASFNSTDPSPEEPPA PSHPHTSSLGRRGPGPGSASALQGFQYGKPHCSVLEKVSKFEQREQGSQRPSVGGSGFGHNYRPHRTVSTSSTSGNDFEETKAHIRFSES AEPLGNGEQHFKNGELKLEEASRQPCGQQLSGGASDSGRGPQRPDARLLRSQSTFQLSSEPEREPEWRDRPGSPESPLLDAPFSRAYRNS IKDAQSRVLGATSFRRRDLELGAPVASRSWRPRPSSAHVGLRSPEASASASPHTPRERHSVTPAEGDLARPVPPAARRGARRRLTPEQKK RSYSEPEKMNEVGIVEEAEPAPLGPQRNGMRFPESSVADRRRLFERDGKACSTLSLSGPELKQFQQSALADYIQRKTGKRPTSAAGCSLQ EPGPLRERAQSAYLQPGPAALEGSGLASASSLSSLREPSLQPRREATLLPATVAETQQAPRDRSSSFAGGRRLGERRRGDLLSGANGGTR GTQRGDETPREPSSWGARAGKSMSAEDLLERSDVLAGPVHVRSRSSPATADKRQDVLLGQDSGFGLVKDPCYLAGPGSRSLSCSERGQEE MLPLFHHLTPRWGGSGCKAIGDSSVPSECPGTLDHQRQASRTPCPRPPLAGTQGLVTDTRAAPLTPIGTPLPSAIPSGYCSQDGQTGRQP LPPYTPAMMHRSNGHTLTQPPGPRGCEGDGPEHGVEEGTRKRVSLPQWPPPSRAKWAHAAREDSLPEESSAPDFANLKHYQKQQSLPSLC STSDPDTPLGAPSTPGRISLRISESVLRDSPPPHEDYEDEVFVRDPHPKATSSPTFEPLPPPPPPPPSQETPVYSMDDFPPPPPHTVCEA QLDSEDPEGPRPSFNKLSKVTIARERHMPGAAHVVGSQTLASRLQTSIKGSEAESTPPSFMSVHAQLAGSLGGQPAPIQTQSLSHDPVSG TQGLEKKVSPDPQKSSEDIRTEALAKEIVHQDKSLADILDPDSRLKTTMDLMEGLFPRDVNLLKENSVKRKAIQRTVSSSGCEGKRNEDK EAVSMLVNCPAYYSVSAPKAELLNKIKEMPAEVNEEEEQADVNEKKAELIGSLTHKLETLQEAKGSLLTDIKLNNALGEEVEALISELCK PNEFDKYRMFIGDLDKVVNLLLSLSGRLARVENVLSGLGEDASNEERSSLYEKRKILAGQHEDARELKENLDRRERVVLGILANYLSEEQ |
* Fusion transcript sequences (only coding sequence (CDS) region). |
>In-frame_PNO1_ENST00000263657_chr2_68385661_+_SHROOM3_ENST00000296043_chr4_77476762_+_6180nt ATGGAATCCGAAATGGAAACGCAGAGCGCCAGGGCAGAGGAGGGCTTTACCCAGGTCACCCGCAAGGGTGGCCGACGGGCGAAGAAACGA CAGGCTGAACAGCTGTCCGCAGCAGGAGAGGGCGGGGATGCGGGCCGCATGGACACAGAGGAGGCCAGGCCGGCGAAGAGGCCCGTCTTC CCACCCCTCTGTGGGGACGGGCTCCTGAGTGGGAAAGAAGAAACAAGGAAAATTCCAGTCCCAGCTAACAGATACACACCATTGAAAGAA AACTGGATGAAGATATTTACTCCTATTGTGGAACATTTGGGACTTCAGATACGCTTTAACTTGAAATCAAGGAATGTAGAAATCAGGGTC GAAGAAGGGGGCAAAGCAGACACCCTGAGCTCCAAACTGCAGGCTGGGGATGAGGTTGTGCACATCAATGAGGTGACTCTGAGCAGCTCC AGAAAGGAGGCAGTTTCCCTGGTGAAAGGATCCTACAAGACCCTCAGGCTGGTAGTGCGCAGAGATGTGTGCACAGACCCAGGCCATGCA GATACTGGTGCCTCTAACTTCGTCAGCCCAGAACACCTCACCTCTGGCCCCCAGCACAGGAAAGCAGCGTGGTCAGGAGGGGTTAAACTT CGGCTGAAGCACAGGCGCAGTGAGCCTGCAGGCCGACCTCACTCGTGGCACACAACTAAATCTGGGGAGAAGCAACCCGATGCCAGCATG ATGCAGATATCTCAGGGTATGATCGGCCCTCCTTGGCACCAAAGCTACCATTCCAGCTCCTCTACTAGTGACCTCTCCAACTATGACCAT GCTTATCTAAGGCGGAGCCCTGACCAGTGCAGCTCCCAGGGGAGCATGGAGAGCCTGGAGCCCAGTGGGGCATACCCACCCTGTCATCTT TCCCCTGCCAAGTCCACCGGCAGCATTGACCAGCTCAGCCACTTCCATAACAAGAGAGACTCGGCTTACAGCTCTTTCTCCACCAGTTCT AGCATCCTAGAGTATCCACACCCTGGCATCTCTGGCCGGGAGCGTTCAGGCTCCATGGACAATACTTCTGCTCGAGGTGGCCTCCTCGAA GGGATGAGGCAGGCAGATATTCGCTATGTCAAGACAGTCTATGACACCCGGAGGGGAGTCTCAGCAGAGTATGAGGTGAACTCTTCAGCC CTGCTGCTTCAAGGTAGGGAGGCCCGAGCCTCAGCAAATGGTCAGGGCTATGATAAATGGTCTAATATTCCTCGGGGCAAGGGAGTGCCA CCCCCATCCTGGAGCCAGCAGTGCCCCAGTTCCTTGGAGACTGCCACGGACAACCTTCCTCCTAAGGTGGGTGCACCCCTGCCTCCAGCT CGGAGTGACAGTTACGCAGCATTTCGGCACCGTGAGCGGCCCAGCTCCTGGTCTAGCCTTGATCAGAAACGGCTCTGCCGGCCTCAGGCA AACTCTTTAGGCTCCCTGAAGTCTCCATTCATAGAGGAGCAGCTGCATACTGTGCTGGAGAAGAGTCCAGAGAACAGCCCCCCAGTGAAG CCCAAGCATAACTATACCCAGAAGGCCCAACCTGGCCAACCTCTGCTGCCGACCAGCATCTACCCGGTACCTTCCCTGGAGCCACACTTT GCCCAGGTGCCTCAGCCTTCTGTGAGTAGCAACGGTATGCTCTACCCTGCACTGGCCAAGGAGAGTGGATACATAGCCCCTCAGGGAGCA TGCAACAAGATGGCTACCATTGATGAGAATGGGAACCAGAATGGATCTGGCAGGCCTGGGTTTGCCTTCTGCCAGCCCTTAGAACATGAC TTGCTGTCCCCAGTGGAGAAGAAACCAGAAGCTACAGCCAAGTATGTCCCCTCCAAAGTCCATTTCTGTTCAGTGCCTGAAAATGAGGAG GATGCCTCCCTGAAGAGACATCTCACACCTCCCCAAGGCAACAGCCCACATTCCAATGAGAGAAAGAGCACCCACAGTAACAAACCATCT TCTCATCCCCACAGCCTCAAATGCCCTCAGGCTCAGGCCTGGCAAGCGGGTGAAGACAAGAGATCTTCCAGGCTCTCAGAGCCCTGGGAG GGCGATTTCCAGGAAGACCACAATGCCAACCTCTGGAGGAGGCTGGAGAGAGAAGGCCTAGGCCAGAGCCTGTCAGGCAACTTTGGCAAG ACCAAGTCAGCCTTCTCATCTCTCCAGAACATTCCTGAGAGTCTGAGAAGACACAGCAGCCTGGAGCTAGGCCGGGGAACCCAGGAGGGT TACCCCGGGGGCAGGCCCACCTGTGCAGTCAACACCAAGGCAGAAGACCCTGGGAGGAAAGCCGCTCCTGACCTCGGGAGCCATCTGGAC CGGCAGGTTTCCTACCCGCGGCCCGAGGGGAGGACCGGTGCCTCGGCTTCTTTCAACAGCACAGACCCAAGTCCCGAAGAGCCGCCTGCC CCCTCGCACCCGCACACATCCAGTCTGGGCCGGAGGGGGCCCGGCCCAGGCAGCGCCTCGGCTCTTCAGGGCTTTCAGTACGGGAAGCCC CACTGCTCGGTGCTGGAGAAGGTCTCCAAATTCGAGCAGCGAGAGCAAGGGAGCCAGAGACCGAGTGTGGGCGGCTCTGGTTTTGGCCAT AACTATAGGCCCCACAGGACCGTCTCAACTTCCAGTACTTCTGGGAATGACTTCGAGGAGACAAAAGCACACATTCGTTTCTCTGAGTCA GCTGAACCCCTAGGCAACGGGGAGCAGCACTTCAAAAACGGGGAGCTGAAGTTGGAAGAGGCTTCCCGGCAGCCCTGCGGTCAGCAGCTG AGCGGAGGAGCGTCGGACAGCGGCCGTGGCCCCCAGAGGCCGGACGCTCGGCTCCTCCGTAGCCAGAGCACCTTCCAGCTCTCCAGCGAG CCAGAGAGGGAGCCCGAGTGGCGGGACAGGCCCGGCTCGCCCGAATCGCCCCTGCTGGATGCCCCCTTCAGCCGCGCCTACCGGAACAGC ATCAAGGACGCACAGTCCCGTGTCTTGGGGGCCACCTCCTTTCGACGTCGAGACCTGGAGCTGGGGGCGCCCGTGGCGTCGAGGTCCTGG CGGCCACGGCCTTCCTCGGCCCACGTGGGGCTGCGGAGCCCCGAGGCGTCGGCCTCCGCCTCCCCGCACACGCCCCGGGAGCGGCACAGC GTGACCCCTGCTGAGGGCGACCTGGCCAGGCCCGTGCCCCCTGCCGCCCGGAGAGGTGCTCGCCGGCGCCTGACTCCCGAGCAGAAGAAG CGCTCCTACTCGGAGCCCGAGAAGATGAACGAGGTGGGGATCGTGGAGGAGGCCGAACCGGCACCCCTGGGCCCGCAGAGAAATGGGATG CGTTTCCCGGAGAGCAGCGTGGCCGACCGGCGCCGTCTCTTCGAGCGCGATGGCAAGGCCTGCTCCACGCTCAGCCTGTCGGGGCCCGAG CTGAAGCAGTTCCAGCAGAGCGCCCTGGCGGACTACATCCAGCGCAAGACCGGCAAGCGGCCTACCTCCGCCGCCGGCTGCAGCCTCCAG GAGCCCGGGCCACTGCGTGAGCGCGCCCAGAGTGCCTACCTCCAGCCCGGCCCCGCGGCGCTCGAAGGCTCCGGCCTCGCCTCGGCCTCC AGCTTGAGCTCACTGCGGGAGCCCAGCCTGCAGCCCCGCAGGGAGGCCACGCTCCTGCCGGCCACAGTTGCAGAAACCCAGCAGGCTCCC CGAGATCGCAGCAGCTCCTTCGCCGGTGGCCGCCGCCTCGGGGAACGGCGACGCGGGGACCTGCTTAGCGGAGCAAACGGTGGAACAAGG GGCACCCAGAGAGGGGATGAGACCCCCAGGGAGCCATCCTCCTGGGGGGCCAGGGCCGGGAAGTCCATGTCGGCCGAGGACCTGCTGGAA CGCTCGGACGTCCTTGCGGGCCCTGTCCATGTGAGGTCCAGGTCATCTCCCGCCACCGCAGACAAGCGCCAGGATGTGCTTTTGGGGCAA GACAGTGGCTTTGGTCTTGTGAAGGATCCATGTTATTTGGCTGGTCCTGGATCTAGGTCACTCAGTTGTTCAGAAAGAGGCCAAGAAGAG ATGCTGCCGCTCTTCCACCATCTCACCCCTCGTTGGGGTGGTTCAGGCTGCAAAGCCATTGGTGATTCCTCCGTTCCTAGTGAATGTCCT GGAACCCTGGACCATCAGAGGCAAGCCAGTAGGACACCCTGCCCCAGGCCACCACTGGCAGGAACGCAAGGGCTGGTCACAGACACCAGG GCTGCACCCCTGACCCCAATTGGCACCCCTCTGCCTTCAGCCATTCCCTCTGGCTACTGCTCACAGGACGGTCAGACAGGGCGACAGCCT CTCCCGCCCTACACCCCTGCCATGATGCACAGAAGCAATGGTCACACCCTGACCCAGCCTCCCGGTCCAAGAGGCTGTGAGGGCGATGGC CCAGAGCATGGGGTAGAAGAGGGAACGAGGAAGAGGGTCTCGCTGCCTCAGTGGCCACCTCCTTCTCGAGCAAAGTGGGCCCACGCAGCC AGAGAGGACAGCCTTCCTGAGGAATCCTCAGCCCCTGATTTTGCAAACCTGAAGCACTATCAAAAACAGCAGAGTCTTCCAAGTTTATGC AGCACTTCTGACCCAGACACACCTCTTGGGGCCCCGAGCACTCCAGGGAGGATCTCCCTCCGAATATCTGAGTCTGTCCTGCGGGACTCC CCGCCACCTCATGAGGATTATGAAGACGAAGTGTTTGTGAGGGATCCGCACCCCAAGGCCACGTCCAGCCCCACATTTGAACCTCTTCCC CCACCCCCACCTCCTCCACCGAGTCAGGAAACCCCGGTGTATAGCATGGATGACTTCCCTCCACCTCCTCCCCACACTGTATGTGAGGCG CAGCTGGACAGTGAGGATCCCGAGGGGCCACGCCCCAGCTTCAACAAACTTTCTAAAGTGACAATTGCAAGGGAAAGGCACATGCCTGGT GCAGCCCATGTGGTAGGTAGTCAGACACTGGCTTCCAGACTCCAAACTTCTATCAAGGGTTCAGAGGCTGAGTCCACACCACCCTCCTTC ATGAGCGTTCACGCCCAACTTGCTGGGTCTCTTGGTGGGCAGCCAGCACCCATCCAGACTCAAAGCCTCAGCCATGATCCAGTCAGTGGA ACTCAGGGTTTAGAAAAGAAAGTCAGTCCTGATCCTCAGAAGAGTTCAGAAGACATCAGAACAGAGGCTTTGGCCAAGGAAATTGTCCAC CAAGACAAATCTCTAGCAGACATTTTGGATCCAGACTCCAGGCTGAAGACAACAATGGACCTGATGGAAGGTTTGTTTCCCCGAGATGTG AACTTGCTGAAGGAAAACAGTGTAAAGAGGAAGGCCATACAGAGAACTGTCAGCTCTTCAGGATGTGAAGGCAAGAGGAATGAAGACAAG GAAGCAGTGAGCATGTTGGTTAACTGCCCTGCCTACTACAGTGTGTCTGCTCCCAAGGCTGAGCTACTGAACAAAATCAAAGAGATGCCA GCAGAAGTGAATGAGGAAGAGGAACAGGCAGATGTCAATGAAAAGAAGGCTGAGCTCATTGGAAGTCTCACCCACAAGCTGGAGACCCTC CAGGAGGCGAAGGGGAGCCTGCTCACGGACATCAAGCTCAACAACGCCCTGGGAGAAGAGGTGGAGGCTCTGATCAGCGAGCTCTGCAAG CCCAATGAGTTTGACAAGTATAGGATGTTCATAGGGGATTTGGACAAGGTGGTCAACCTGCTGCTCTCCCTCTCGGGGCGTCTAGCCCGT GTTGAGAATGTCCTTAGCGGCCTTGGTGAAGATGCCAGTAATGAAGAAAGGAGCTCTCTTTACGAGAAAAGGAAGATCCTGGCTGGTCAG CATGAGGATGCCCGGGAGCTGAAGGAGAACCTGGATCGCAGGGAGCGAGTAGTGCTGGGCATCTTGGCCAATTACCTTTCAGAGGAGCAG CTCCAGGACTACCAGCACTTCGTGAAAATGAAGTCCACGCTCCTCATTGAGCAACGGAAGCTGGATGACAAGATCAAGCTGGGCCAGGAG CAGGTCAAGTGTCTGCTGGAGAGCCTGCCCTCAGATTTCATTCCCAAGGCTGGGGCCCTGGCTCTGCCCCCAAACCTCACGAGTGAGCCC |
* Fusion transcript sequences (Full-length transcript). |
>In-frame_PNO1_ENST00000263657_chr2_68385661_+_SHROOM3_ENST00000296043_chr4_77476762_+_10347nt GCGGAGCTGCAGGGGTGGTTGGCTGAGGCTGGCTTCTGCGTGGTGCAGCTGCGCACGTGTTTCAGCCGGCAGCGCTTTAAGATTTCCGGG GATGGAATCCGAAATGGAAACGCAGAGCGCCAGGGCAGAGGAGGGCTTTACCCAGGTCACCCGCAAGGGTGGCCGACGGGCGAAGAAACG ACAGGCTGAACAGCTGTCCGCAGCAGGAGAGGGCGGGGATGCGGGCCGCATGGACACAGAGGAGGCCAGGCCGGCGAAGAGGCCCGTCTT CCCACCCCTCTGTGGGGACGGGCTCCTGAGTGGGAAAGAAGAAACAAGGAAAATTCCAGTCCCAGCTAACAGATACACACCATTGAAAGA AAACTGGATGAAGATATTTACTCCTATTGTGGAACATTTGGGACTTCAGATACGCTTTAACTTGAAATCAAGGAATGTAGAAATCAGGGT CGAAGAAGGGGGCAAAGCAGACACCCTGAGCTCCAAACTGCAGGCTGGGGATGAGGTTGTGCACATCAATGAGGTGACTCTGAGCAGCTC CAGAAAGGAGGCAGTTTCCCTGGTGAAAGGATCCTACAAGACCCTCAGGCTGGTAGTGCGCAGAGATGTGTGCACAGACCCAGGCCATGC AGATACTGGTGCCTCTAACTTCGTCAGCCCAGAACACCTCACCTCTGGCCCCCAGCACAGGAAAGCAGCGTGGTCAGGAGGGGTTAAACT TCGGCTGAAGCACAGGCGCAGTGAGCCTGCAGGCCGACCTCACTCGTGGCACACAACTAAATCTGGGGAGAAGCAACCCGATGCCAGCAT GATGCAGATATCTCAGGGTATGATCGGCCCTCCTTGGCACCAAAGCTACCATTCCAGCTCCTCTACTAGTGACCTCTCCAACTATGACCA TGCTTATCTAAGGCGGAGCCCTGACCAGTGCAGCTCCCAGGGGAGCATGGAGAGCCTGGAGCCCAGTGGGGCATACCCACCCTGTCATCT TTCCCCTGCCAAGTCCACCGGCAGCATTGACCAGCTCAGCCACTTCCATAACAAGAGAGACTCGGCTTACAGCTCTTTCTCCACCAGTTC TAGCATCCTAGAGTATCCACACCCTGGCATCTCTGGCCGGGAGCGTTCAGGCTCCATGGACAATACTTCTGCTCGAGGTGGCCTCCTCGA AGGGATGAGGCAGGCAGATATTCGCTATGTCAAGACAGTCTATGACACCCGGAGGGGAGTCTCAGCAGAGTATGAGGTGAACTCTTCAGC CCTGCTGCTTCAAGGTAGGGAGGCCCGAGCCTCAGCAAATGGTCAGGGCTATGATAAATGGTCTAATATTCCTCGGGGCAAGGGAGTGCC ACCCCCATCCTGGAGCCAGCAGTGCCCCAGTTCCTTGGAGACTGCCACGGACAACCTTCCTCCTAAGGTGGGTGCACCCCTGCCTCCAGC TCGGAGTGACAGTTACGCAGCATTTCGGCACCGTGAGCGGCCCAGCTCCTGGTCTAGCCTTGATCAGAAACGGCTCTGCCGGCCTCAGGC AAACTCTTTAGGCTCCCTGAAGTCTCCATTCATAGAGGAGCAGCTGCATACTGTGCTGGAGAAGAGTCCAGAGAACAGCCCCCCAGTGAA GCCCAAGCATAACTATACCCAGAAGGCCCAACCTGGCCAACCTCTGCTGCCGACCAGCATCTACCCGGTACCTTCCCTGGAGCCACACTT TGCCCAGGTGCCTCAGCCTTCTGTGAGTAGCAACGGTATGCTCTACCCTGCACTGGCCAAGGAGAGTGGATACATAGCCCCTCAGGGAGC ATGCAACAAGATGGCTACCATTGATGAGAATGGGAACCAGAATGGATCTGGCAGGCCTGGGTTTGCCTTCTGCCAGCCCTTAGAACATGA CTTGCTGTCCCCAGTGGAGAAGAAACCAGAAGCTACAGCCAAGTATGTCCCCTCCAAAGTCCATTTCTGTTCAGTGCCTGAAAATGAGGA GGATGCCTCCCTGAAGAGACATCTCACACCTCCCCAAGGCAACAGCCCACATTCCAATGAGAGAAAGAGCACCCACAGTAACAAACCATC TTCTCATCCCCACAGCCTCAAATGCCCTCAGGCTCAGGCCTGGCAAGCGGGTGAAGACAAGAGATCTTCCAGGCTCTCAGAGCCCTGGGA GGGCGATTTCCAGGAAGACCACAATGCCAACCTCTGGAGGAGGCTGGAGAGAGAAGGCCTAGGCCAGAGCCTGTCAGGCAACTTTGGCAA GACCAAGTCAGCCTTCTCATCTCTCCAGAACATTCCTGAGAGTCTGAGAAGACACAGCAGCCTGGAGCTAGGCCGGGGAACCCAGGAGGG TTACCCCGGGGGCAGGCCCACCTGTGCAGTCAACACCAAGGCAGAAGACCCTGGGAGGAAAGCCGCTCCTGACCTCGGGAGCCATCTGGA CCGGCAGGTTTCCTACCCGCGGCCCGAGGGGAGGACCGGTGCCTCGGCTTCTTTCAACAGCACAGACCCAAGTCCCGAAGAGCCGCCTGC CCCCTCGCACCCGCACACATCCAGTCTGGGCCGGAGGGGGCCCGGCCCAGGCAGCGCCTCGGCTCTTCAGGGCTTTCAGTACGGGAAGCC CCACTGCTCGGTGCTGGAGAAGGTCTCCAAATTCGAGCAGCGAGAGCAAGGGAGCCAGAGACCGAGTGTGGGCGGCTCTGGTTTTGGCCA TAACTATAGGCCCCACAGGACCGTCTCAACTTCCAGTACTTCTGGGAATGACTTCGAGGAGACAAAAGCACACATTCGTTTCTCTGAGTC AGCTGAACCCCTAGGCAACGGGGAGCAGCACTTCAAAAACGGGGAGCTGAAGTTGGAAGAGGCTTCCCGGCAGCCCTGCGGTCAGCAGCT GAGCGGAGGAGCGTCGGACAGCGGCCGTGGCCCCCAGAGGCCGGACGCTCGGCTCCTCCGTAGCCAGAGCACCTTCCAGCTCTCCAGCGA GCCAGAGAGGGAGCCCGAGTGGCGGGACAGGCCCGGCTCGCCCGAATCGCCCCTGCTGGATGCCCCCTTCAGCCGCGCCTACCGGAACAG CATCAAGGACGCACAGTCCCGTGTCTTGGGGGCCACCTCCTTTCGACGTCGAGACCTGGAGCTGGGGGCGCCCGTGGCGTCGAGGTCCTG GCGGCCACGGCCTTCCTCGGCCCACGTGGGGCTGCGGAGCCCCGAGGCGTCGGCCTCCGCCTCCCCGCACACGCCCCGGGAGCGGCACAG CGTGACCCCTGCTGAGGGCGACCTGGCCAGGCCCGTGCCCCCTGCCGCCCGGAGAGGTGCTCGCCGGCGCCTGACTCCCGAGCAGAAGAA GCGCTCCTACTCGGAGCCCGAGAAGATGAACGAGGTGGGGATCGTGGAGGAGGCCGAACCGGCACCCCTGGGCCCGCAGAGAAATGGGAT GCGTTTCCCGGAGAGCAGCGTGGCCGACCGGCGCCGTCTCTTCGAGCGCGATGGCAAGGCCTGCTCCACGCTCAGCCTGTCGGGGCCCGA GCTGAAGCAGTTCCAGCAGAGCGCCCTGGCGGACTACATCCAGCGCAAGACCGGCAAGCGGCCTACCTCCGCCGCCGGCTGCAGCCTCCA GGAGCCCGGGCCACTGCGTGAGCGCGCCCAGAGTGCCTACCTCCAGCCCGGCCCCGCGGCGCTCGAAGGCTCCGGCCTCGCCTCGGCCTC CAGCTTGAGCTCACTGCGGGAGCCCAGCCTGCAGCCCCGCAGGGAGGCCACGCTCCTGCCGGCCACAGTTGCAGAAACCCAGCAGGCTCC CCGAGATCGCAGCAGCTCCTTCGCCGGTGGCCGCCGCCTCGGGGAACGGCGACGCGGGGACCTGCTTAGCGGAGCAAACGGTGGAACAAG GGGCACCCAGAGAGGGGATGAGACCCCCAGGGAGCCATCCTCCTGGGGGGCCAGGGCCGGGAAGTCCATGTCGGCCGAGGACCTGCTGGA ACGCTCGGACGTCCTTGCGGGCCCTGTCCATGTGAGGTCCAGGTCATCTCCCGCCACCGCAGACAAGCGCCAGGATGTGCTTTTGGGGCA AGACAGTGGCTTTGGTCTTGTGAAGGATCCATGTTATTTGGCTGGTCCTGGATCTAGGTCACTCAGTTGTTCAGAAAGAGGCCAAGAAGA GATGCTGCCGCTCTTCCACCATCTCACCCCTCGTTGGGGTGGTTCAGGCTGCAAAGCCATTGGTGATTCCTCCGTTCCTAGTGAATGTCC TGGAACCCTGGACCATCAGAGGCAAGCCAGTAGGACACCCTGCCCCAGGCCACCACTGGCAGGAACGCAAGGGCTGGTCACAGACACCAG GGCTGCACCCCTGACCCCAATTGGCACCCCTCTGCCTTCAGCCATTCCCTCTGGCTACTGCTCACAGGACGGTCAGACAGGGCGACAGCC TCTCCCGCCCTACACCCCTGCCATGATGCACAGAAGCAATGGTCACACCCTGACCCAGCCTCCCGGTCCAAGAGGCTGTGAGGGCGATGG CCCAGAGCATGGGGTAGAAGAGGGAACGAGGAAGAGGGTCTCGCTGCCTCAGTGGCCACCTCCTTCTCGAGCAAAGTGGGCCCACGCAGC CAGAGAGGACAGCCTTCCTGAGGAATCCTCAGCCCCTGATTTTGCAAACCTGAAGCACTATCAAAAACAGCAGAGTCTTCCAAGTTTATG CAGCACTTCTGACCCAGACACACCTCTTGGGGCCCCGAGCACTCCAGGGAGGATCTCCCTCCGAATATCTGAGTCTGTCCTGCGGGACTC CCCGCCACCTCATGAGGATTATGAAGACGAAGTGTTTGTGAGGGATCCGCACCCCAAGGCCACGTCCAGCCCCACATTTGAACCTCTTCC CCCACCCCCACCTCCTCCACCGAGTCAGGAAACCCCGGTGTATAGCATGGATGACTTCCCTCCACCTCCTCCCCACACTGTATGTGAGGC GCAGCTGGACAGTGAGGATCCCGAGGGGCCACGCCCCAGCTTCAACAAACTTTCTAAAGTGACAATTGCAAGGGAAAGGCACATGCCTGG TGCAGCCCATGTGGTAGGTAGTCAGACACTGGCTTCCAGACTCCAAACTTCTATCAAGGGTTCAGAGGCTGAGTCCACACCACCCTCCTT CATGAGCGTTCACGCCCAACTTGCTGGGTCTCTTGGTGGGCAGCCAGCACCCATCCAGACTCAAAGCCTCAGCCATGATCCAGTCAGTGG AACTCAGGGTTTAGAAAAGAAAGTCAGTCCTGATCCTCAGAAGAGTTCAGAAGACATCAGAACAGAGGCTTTGGCCAAGGAAATTGTCCA CCAAGACAAATCTCTAGCAGACATTTTGGATCCAGACTCCAGGCTGAAGACAACAATGGACCTGATGGAAGGTTTGTTTCCCCGAGATGT GAACTTGCTGAAGGAAAACAGTGTAAAGAGGAAGGCCATACAGAGAACTGTCAGCTCTTCAGGATGTGAAGGCAAGAGGAATGAAGACAA GGAAGCAGTGAGCATGTTGGTTAACTGCCCTGCCTACTACAGTGTGTCTGCTCCCAAGGCTGAGCTACTGAACAAAATCAAAGAGATGCC AGCAGAAGTGAATGAGGAAGAGGAACAGGCAGATGTCAATGAAAAGAAGGCTGAGCTCATTGGAAGTCTCACCCACAAGCTGGAGACCCT CCAGGAGGCGAAGGGGAGCCTGCTCACGGACATCAAGCTCAACAACGCCCTGGGAGAAGAGGTGGAGGCTCTGATCAGCGAGCTCTGCAA GCCCAATGAGTTTGACAAGTATAGGATGTTCATAGGGGATTTGGACAAGGTGGTCAACCTGCTGCTCTCCCTCTCGGGGCGTCTAGCCCG TGTTGAGAATGTCCTTAGCGGCCTTGGTGAAGATGCCAGTAATGAAGAAAGGAGCTCTCTTTACGAGAAAAGGAAGATCCTGGCTGGTCA GCATGAGGATGCCCGGGAGCTGAAGGAGAACCTGGATCGCAGGGAGCGAGTAGTGCTGGGCATCTTGGCCAATTACCTTTCAGAGGAGCA GCTCCAGGACTACCAGCACTTCGTGAAAATGAAGTCCACGCTCCTCATTGAGCAACGGAAGCTGGATGACAAGATCAAGCTGGGCCAGGA GCAGGTCAAGTGTCTGCTGGAGAGCCTGCCCTCAGATTTCATTCCCAAGGCTGGGGCCCTGGCTCTGCCCCCAAACCTCACGAGTGAGCC CATTCCTGCTGGGGGCTGTACTTTCAGTGGTATTTTCCCAACATTAACCTCTCCACTTTAACCTCTTCTAAAATACCCAACCAAAAGATC ACTGTTTCTCTCAACACTATTTAATCTGAAAAATGTTTCAGTACAAACCACTGTTTGAACTATCTGGGTTATTGGTGTTTGTTCCTGATG AAAGGAAAAAAATTCTCTCCAGGAGGAAGCCTTTTTCCTTCTTGCCCTTCCTGATTGATCTTCTGAGAGCTCGAATGCTGCTGGACACGT ACCCCTTTCTATTATTACTTTGTAGTAGAAAGAAAGTTAATGAAACTGAGAACTGATTGGAGGGTGTTTGATCATTTAGTTTTTAACAGG CTGAGGCAACATGGATCAGTGTGTGTCCCCCTCAGGAATGTATCCACAGTGGCCTTCCTTGCTGGTGGGCAGTGTATCCTGATGGCAGGG TACAAGTACCATTAATGAAGGGTCTGCAACATAAAGCCTTAAAAAGACACACACTAAGAAAACTGTAAAACCTTGAACATTGTTATTTAT ATTTTTTAAAATGGAAAAGATCACTATGTTTGTTGTGCTAACCACTTATTTGATTCTGTTTTGTGGTGGACATAGATGATTACGTTTGAG CTTTGTATTTTGTGAAAACCTTAATGAAATGAATTCCAAAGATAGTCACGTTGAGCGTGAAGACTTTTTTTCTTACATTCCTGTCTTATT TTTACCAACACGAGCAGGCATTCTGCGCTTCCACTGGACTGAGTATGGGGGAGTCCTGCTCCCCTCCTGTCTCACACCTTCCCCAGGAGG AAGGCCTCATGCACTGCGGTTATTGCATCATTTCCTAGTGCTTCATGTCATTATCACTGGTGGGGAAACAAAGCTAAATTTTATTAACAA AGACAACTCTCAGACCTATATAATAGGAGGAGGACGTCCAGAATCCAACAAAATTCAAACGGAGCCCATGCTGTTCTCCTGAACAAGATT TGGGCTAAATACGGCCTGTTTATTGAGGCTGTTTTAATGATGCTTTAAAAAAAAAAAATGTTTTCTAAAATGTCAAACCTGTTGACCACA CTTTGATTAAAAACTGCCTCCTTAACCTCTGAAGACTGATTTTGCTTTATCATGTTTCAATAATAACATTTCAGAGGTTACTCTGTAGCC CCAGTTGTAAGCTTATAAAAACAAACTGGAAGGCTGAGGAGGTTATGGGCTGGCAGCCAGGCTATGTTTACAGCTGCTGGAGATGGCAGT AGCCTTATACTTTGAGCAGGTAGTACATCCCAGGCTGTGCTAGAGGTAGATTTGTTTTTTCACGTTTGATCTGTGGCTGGTGGCCACCTT TGTTGATTTGGGCTTACGAGTTTCATAGTAGCCAGTCTTAGAAAATTGGGGGAGTAAAATTTTGAAGTAAAAAAAAAAAAAAAATGACAA GGGAACCAAATGCTCCTTCTCCCCTTAGTACATTTTCATTACTTAATGAAGTTTTATCTCCTATGTAAGAATATCAAAATTGTAGTTTGG GTCTCCAGTAGAGATGTCTTTTGATTAACTTATAAACAACTGGCCACCCAGAAGTTTCCTTTGCATAGTCAACCAAAGCTATGGCTTTGT TCTTTGGAGCTTATATACTGCATGACTCCATTGATACAAATAAGACAGCACCTTGGTTTCCCAGGGATGTTTTCATTCAGAGGTCCTGTC TCCCAGGAAAGCAGTAGAACCAGTGACAGCATTCAACAGCCACACTGCATGGTCATCAGTCTTAGGCCAACATGGGAGCCTGAAATTAAC TCCATCAGTAACTACCTGTGTGTCTTGCTGATACTGAATGAGCCCTCACAAGCCAAGCCAGGTGGAAGACAGCCAGCAAACGTCTACAGT TATTCTTAGTGAAATTCCTCAGAGGAATCCAGGGGGCTCCCAGTTCCCAACACTCTTCGAGATGACCATTTTTCGGGATTTGACTGGGGA ACATTTTACATATTCAGTCTTTCTCAAAAATTTTTATTTATTTTCTTGAGAAAGGGTCTTACTATGTTGCCCAGGCTGGAGTGCAGAGTG GTGCGATAACAGCTCATTGCAGTCTGAACCTCTGAGGCTCAAGCCATCCTCCCATCTCAGCCTCCCAAGTAGCTGGGACCACAGGTGTGC ACCACTATGCTTGGCTAATTTTTTGATTTTTTATAGAGACGGGGGTCTCGCTATGTTGCCCAGGCTGGTTTCAAACTCCTGGGCTCAAGG GATCCTTCCGCTTTGGTCCCAGAAGTGCTGGGATTACAGGCATGAGCCACTTCACCCAGCCACTTTTCTAATTTATAGACATAAAAGTAA TTGACTCCCACAGCACAGTAACAGGCAATGCTGCTTGGCATGCCACAAACATCTGAAAGCTTGTGACACTCCTAGGATTGTGTCCATTCT TTCATTATGTGGAAACTTTGTTCTGTTATGTGAAATGGGTAAGGCACCAAGTGAGACTTTGAAATCTAATTTTTAGGTGGATGTGATATT TATTGTAATAGGACTTGACCTCTGTACTTTAAAGAAATCACTAACCAAATTTTCAAAGTTTCCTTTTAAATGCGTTTAGCTAGAAATCTA TGTATTTATCCCTTTCCTATTTTGCATTCTTCTCCCACTATTTTTAAAAACTCATTTACAGTAGAAACCATTCTTCTTTCTCCCAACAGT ATCCTTTGCCAAGACCATGAGAACAGTAAGGAGCATGTTGTTGGTCAGGGTTTCAGAATACGCGTGATGTCACTGAGAATGTTTGCTCAC AGTCAATAATTGTCTTTGTGGATGTGATAATTTTGGAGATACACTTCTGGTCAGAACTCAGGTGAGATAATCTTGCAATACTCCAAATGC AGATACTCCAGCCACCCGCAAGGTTCCAGGAAAGGACAATGTCCTGCGAGAAAATCAGGAGGCCTCCACTTCCTGGGCCACTTGAGAAGT TCCTGGGCATGTCACTACATGTTGGTTGACTCAGCCATTTCTCATGCTGTTTTGTTTCTTGCGGTGGCCACTTAACCCCAAAGAATGAAG GGAGGATCCACAGTGAAAGTGCCTGAGTTTCTCTATGAGACCAGATGCTGTCGAAACCAAACATCTTTTCCTTTGCTCTATGGGAACATT TTAGGGTTTGTTTTGCACAGCTGGTTTCCAGACTAGAAGATTAACAAGTTTGGGTCCACCCCTAAGAATCAGTGGCTGTCTTTTAAGGTG AGGAGTGTGGGCTTAACTGAGGTCCTTTGAGGGAGCTATAAAGGAGAAACAACCTGGGACATCCCAGTTTTCCTATTCCTCCACTGTTAA TATCTCATCTAAAATAATTCATGAGTTTAAATGGTAAATATATGCTTTAAGCTCTACCTTTAAACTTGTATGTTATTCAGGCATCTCTTA TTAAGATACTGGGTCTCTGGATACCCAAGGAAATGTTGGCTTTTTATTCTTATGTGGTTCCAAATTTACTTCTCTTCAGTTTAATTGTCC ATGGTAGTGCTGGCTTCATTGTTAGGTTGGAGTTATTATTTTCCTTTTAGAACAACATGAATTTTATTCACCTTACTATTAGAAAAAGGA ATAACTACAGCCAGAAATAACTTCATTTCCTACAAGGTATAAAAAGTGGTCAAGTGAATGTGAAGGGGCTTTTCTACACAGGAATATATT ATCGGGAACAAAGTATTTCCTGCTGCCTTAACTCTTTGGGATGCATAGGATAAAATGATAAAGACCATTTTAATATCAGAAAGGGTTGTC TTATTAATTTTTAAATAAAACTTCACATTTCTTAATGGGGAGCTCATTCAGAAACTAAATAATGGTTTCTCAAAGTGTGGTCAGGATACG ATCTGCATCAGAATCCTTGGAATGCTTGTTAAAAATACCAATTGCTATGACAAAACCAAGTCTGCTGGAAACTGCATTTCAGCAGGTTTC CCATGTTATTCTGATGTATTTTAACATTTGAGAGCCACTACCAATCATCTGTACAGTTCCTACTGTTATGATCACAATAAGACTAACATG |
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FusionGenePPI for PNO1_SHROOM3 |
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Hgene | Hgene's interactors | Tgene | Tgene's interactors |
PNO1 | KLF6, GSTP1, ATP5C1, SGSM2, CSNK1E, PDPK1, FRZB, CAND1, BYSL, WDR3, DDX49, RB1, FBL, VCP, FAU, KCMF1, RPS12, RPS13, RPS26, RPS20, RPS23, RPS24, RPS27, RPS5, RPS7, RPS9, WDR26, WIBG, RPS15A, RPS3, RPS6, TSR1, EED, RNF2, EGFR, COMTD1, UTP14A, UTP14C, MTMR3, NOB1, HNRNPA1, LRRC47, NOC3L, NSUN2, RPSA, XPO1, HNRNPU, MYC, NPM1, RPL10, C17orf85, PTPN2, FOXA1 | SHROOM3 | SFN, SAAL1, YWHAB, UBTD1, CDK2, ILK, RPS6KA2, SIK2, RPS6KB2, MYH9, RAB32, SNW1, CDC5L, CDH1, TRIM25 |
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Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Still interaction with |
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Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Interaction lost with |
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Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Interaction lost with |
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RelatedDrugs for PNO1_SHROOM3 |
![]() (DrugBank Version 5.1.0 2018-04-02) |
Partner | Gene | UniProtAcc | DrugBank ID | Drug name | Drug activity | Drug type | Drug status |
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RelatedDiseases for PNO1_SHROOM3 |
![]() (DisGeNet 4.0) |
Partner | Gene | Disease ID | Disease name | # pubmeds | Source |