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Fusion gene ID: 27702 |
FusionGeneSummary for PLP1_PLP1 |
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Fusion gene information | Fusion gene name: PLP1_PLP1 | Fusion gene ID: 27702 | Hgene | Tgene | Gene symbol | PLP1 | PLP1 | Gene ID | 5354 | 5354 |
Gene name | proteolipid protein 1 | proteolipid protein 1 | |
Synonyms | GPM6C|HLD1|MMPL|PLP|PLP/DM20|PMD|SPG2 | GPM6C|HLD1|MMPL|PLP|PLP/DM20|PMD|SPG2 | |
Cytomap | Xq22.2 | Xq22.2 | |
Type of gene | protein-coding | protein-coding | |
Description | myelin proteolipid proteinlipophilinmajor myelin proteolipid protein | myelin proteolipid proteinlipophilinmajor myelin proteolipid protein | |
Modification date | 20180523 | 20180523 | |
UniProtAcc | P60201 | P60201 | |
Ensembl transtripts involved in fusion gene | ENST00000418604, ENST00000303958, ENST00000361621, ENST00000466486, | ENST00000418604, ENST00000303958, ENST00000361621, ENST00000466486, | |
Fusion gene scores | * DoF score | 4 X 4 X 2=32 | 9 X 8 X 2=144 |
# samples | 4 | 9 | |
** MAII score | log2(4/32*10)=0.321928094887362 effective Gene in Pan-Cancer Fusion Genes (eGinPCFGs). DoF>8 and MAII>0 | log2(9/144*10)=-0.678071905112638 possibly effective Gene in Pan-Cancer Fusion Genes (peGinPCFGs). DoF>8 and MAII<0 | |
Context | PubMed: PLP1 [Title/Abstract] AND PLP1 [Title/Abstract] AND fusion [Title/Abstract] | ||
Functional or gene categories assigned by FusionGDB annotation |
* DoF score (Degree of Frequency) = # partners X # break points X # cancer types ** MAII score (Major Active Isofusion Index) = log2(# samples/DoF score*10) |
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Partner | Gene | GO ID | GO term | PubMed ID |
![]() (ChiTars (NAR, 2018), tumorfusions (NAR, 2018), Gao et al. (Cell, 2018)) * All genome coordinats were lifted-over on hg19. * Click on the break point to see the gene structure around the break point region using the UCSC Genome Browser. |
Data type | Source | Cancer type | Sample | Hgene | Hchr | Hbp | Hstrand | Tgene | Tchr | Tbp | Tstrand |
ChiTaRS3.1 | CR740283 | PLP1 | chrX | 103046812 | - | PLP1 | chrX | 103046981 | + |
* LD: Li Ding group's fusion gene list RV: Roel Verhaak group's fusion gene list ChiTaRs fusion database |
![]() * Click on the break point to see the gene structure around the break point region using the UCSC Genome Browser. |
ORF | Henst | Tenst | Hgene | Hchr | Hbp | Hstrand | Tgene | Tchr | Tbp | Tstrand |
3UTR-3UTR | ENST00000418604 | ENST00000418604 | PLP1 | chrX | 103046812 | - | PLP1 | chrX | 103046981 | + |
3UTR-3UTR | ENST00000418604 | ENST00000303958 | PLP1 | chrX | 103046812 | - | PLP1 | chrX | 103046981 | + |
3UTR-3UTR | ENST00000418604 | ENST00000361621 | PLP1 | chrX | 103046812 | - | PLP1 | chrX | 103046981 | + |
3UTR-intron | ENST00000418604 | ENST00000466486 | PLP1 | chrX | 103046812 | - | PLP1 | chrX | 103046981 | + |
3UTR-3UTR | ENST00000303958 | ENST00000418604 | PLP1 | chrX | 103046812 | - | PLP1 | chrX | 103046981 | + |
3UTR-3UTR | ENST00000303958 | ENST00000303958 | PLP1 | chrX | 103046812 | - | PLP1 | chrX | 103046981 | + |
3UTR-3UTR | ENST00000303958 | ENST00000361621 | PLP1 | chrX | 103046812 | - | PLP1 | chrX | 103046981 | + |
3UTR-intron | ENST00000303958 | ENST00000466486 | PLP1 | chrX | 103046812 | - | PLP1 | chrX | 103046981 | + |
3UTR-3UTR | ENST00000361621 | ENST00000418604 | PLP1 | chrX | 103046812 | - | PLP1 | chrX | 103046981 | + |
3UTR-3UTR | ENST00000361621 | ENST00000303958 | PLP1 | chrX | 103046812 | - | PLP1 | chrX | 103046981 | + |
3UTR-3UTR | ENST00000361621 | ENST00000361621 | PLP1 | chrX | 103046812 | - | PLP1 | chrX | 103046981 | + |
3UTR-intron | ENST00000361621 | ENST00000466486 | PLP1 | chrX | 103046812 | - | PLP1 | chrX | 103046981 | + |
intron-3UTR | ENST00000466486 | ENST00000418604 | PLP1 | chrX | 103046812 | - | PLP1 | chrX | 103046981 | + |
intron-3UTR | ENST00000466486 | ENST00000303958 | PLP1 | chrX | 103046812 | - | PLP1 | chrX | 103046981 | + |
intron-3UTR | ENST00000466486 | ENST00000361621 | PLP1 | chrX | 103046812 | - | PLP1 | chrX | 103046981 | + |
intron-intron | ENST00000466486 | ENST00000466486 | PLP1 | chrX | 103046812 | - | PLP1 | chrX | 103046981 | + |
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FusionProtFeatures for PLP1_PLP1 |
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Hgene | Tgene |
PLP1 | PLP1 |
This is the major myelin protein from the centralnervous system. It plays an important role in the formation ormaintenance of the multilamellar structure of myelin. | This is the major myelin protein from the centralnervous system. It plays an important role in the formation ormaintenance of the multilamellar structure of myelin. |
![]() * Minus value of BPloci means that the break pointn is located before the CDS. |
- In-frame and retained protein feature among the 13 regional features. |
Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Protein feature | Protein feature note |
- In-frame and not-retained protein feature among the 13 regional features. |
Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Protein feature | Protein feature note |
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FusionGeneSequence for PLP1_PLP1 |
![]() (nt: nucleotides, aa: amino acids) |
* Fusion amino acid sequences. |
* Fusion transcript sequences (only coding sequence (CDS) region). |
* Fusion transcript sequences (Full-length transcript). |
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FusionGenePPI for PLP1_PLP1 |
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Hgene | Hgene's interactors | Tgene | Tgene's interactors |
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Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Still interaction with |
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Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Interaction lost with |
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Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Interaction lost with |
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RelatedDrugs for PLP1_PLP1 |
![]() (DrugBank Version 5.1.0 2018-04-02) |
Partner | Gene | UniProtAcc | DrugBank ID | Drug name | Drug activity | Drug type | Drug status |
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RelatedDiseases for PLP1_PLP1 |
![]() (DisGeNet 4.0) |
Partner | Gene | Disease ID | Disease name | # pubmeds | Source |
Hgene | PLP1 | C0205711 | Pelizaeus-Merzbacher Disease | 31 | CTD_human;HPO;UNIPROT |
Hgene | PLP1 | C1839264 | SPASTIC PARAPLEGIA 2, X-LINKED (disorder) | 9 | CTD_human;ORPHANET;UNIPROT |
Hgene | PLP1 | C0036341 | Schizophrenia | 4 | PSYGENET |
Hgene | PLP1 | C0009171 | Cocaine Abuse | 2 | PSYGENET |
Hgene | PLP1 | C2673482 | Increased susceptibility to schizophrenia | 1 | PSYGENET |
Tgene | PLP1 | C0205711 | Pelizaeus-Merzbacher Disease | 31 | CTD_human;HPO;UNIPROT |
Tgene | PLP1 | C1839264 | SPASTIC PARAPLEGIA 2, X-LINKED (disorder) | 9 | CTD_human;ORPHANET;UNIPROT |
Tgene | PLP1 | C0036341 | Schizophrenia | 4 | PSYGENET |
Tgene | PLP1 | C0009171 | Cocaine Abuse | 2 | PSYGENET |
Tgene | PLP1 | C2673482 | Increased susceptibility to schizophrenia | 1 | PSYGENET |