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Fusion gene ID: 27456 |
FusionGeneSummary for PLAGL1_CPM |
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Fusion gene information | Fusion gene name: PLAGL1_CPM | Fusion gene ID: 27456 | Hgene | Tgene | Gene symbol | PLAGL1 | CPM | Gene ID | 5325 | 1368 |
Gene name | PLAG1 like zinc finger 1 | carboxypeptidase M | |
Synonyms | LOT1|ZAC|ZAC1 | - | |
Cytomap | 6q24.2 | 12q15 | |
Type of gene | protein-coding | protein-coding | |
Description | zinc finger protein PLAGL1PLAG-like 1lost on transformation 1pleiomorphic adenoma gene-like 1tumor suppressor ZAC | carboxypeptidase Mrenal carboxypeptidaseurinary carboxypeptidase B | |
Modification date | 20180523 | 20180523 | |
UniProtAcc | Q9UM63 | P14384 | |
Ensembl transtripts involved in fusion gene | ENST00000429150, ENST00000416623, ENST00000392309, ENST00000392307, ENST00000437412, ENST00000444202, ENST00000493898, ENST00000360537, ENST00000354765, ENST00000367572, ENST00000367571, | ENST00000546373, ENST00000551568, ENST00000338356, ENST00000549691, | |
Fusion gene scores | * DoF score | 4 X 4 X 3=48 | 38 X 10 X 8=3040 |
# samples | 3 | 35 | |
** MAII score | log2(3/48*10)=-0.678071905112638 possibly effective Gene in Pan-Cancer Fusion Genes (peGinPCFGs). DoF>8 and MAII<0 | log2(35/3040*10)=-3.11864449649862 possibly effective Gene in Pan-Cancer Fusion Genes (peGinPCFGs). DoF>8 and MAII<0 | |
Context | PubMed: PLAGL1 [Title/Abstract] AND CPM [Title/Abstract] AND fusion [Title/Abstract] | ||
Functional or gene categories assigned by FusionGDB annotation |
* DoF score (Degree of Frequency) = # partners X # break points X # cancer types ** MAII score (Major Active Isofusion Index) = log2(# samples/DoF score*10) |
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Partner | Gene | GO ID | GO term | PubMed ID |
Hgene | PLAGL1 | GO:0045944 | positive regulation of transcription by RNA polymerase II | 9671765|15888726 |
![]() (ChiTars (NAR, 2018), tumorfusions (NAR, 2018), Gao et al. (Cell, 2018)) * All genome coordinats were lifted-over on hg19. * Click on the break point to see the gene structure around the break point region using the UCSC Genome Browser. |
Data type | Source | Cancer type | Sample | Hgene | Hchr | Hbp | Hstrand | Tgene | Tchr | Tbp | Tstrand |
TCGA | LD | SARC | TCGA-DX-A6BH-01A | PLAGL1 | chr6 | 144281606 | - | CPM | chr12 | 69351458 | - |
* LD: Li Ding group's fusion gene list RV: Roel Verhaak group's fusion gene list ChiTaRs fusion database |
![]() * Click on the break point to see the gene structure around the break point region using the UCSC Genome Browser. |
ORF | Henst | Tenst | Hgene | Hchr | Hbp | Hstrand | Tgene | Tchr | Tbp | Tstrand |
5UTR-intron | ENST00000429150 | ENST00000546373 | PLAGL1 | chr6 | 144281606 | - | CPM | chr12 | 69351458 | - |
5UTR-intron | ENST00000429150 | ENST00000551568 | PLAGL1 | chr6 | 144281606 | - | CPM | chr12 | 69351458 | - |
5UTR-intron | ENST00000429150 | ENST00000338356 | PLAGL1 | chr6 | 144281606 | - | CPM | chr12 | 69351458 | - |
5UTR-5UTR | ENST00000429150 | ENST00000549691 | PLAGL1 | chr6 | 144281606 | - | CPM | chr12 | 69351458 | - |
5UTR-intron | ENST00000416623 | ENST00000546373 | PLAGL1 | chr6 | 144281606 | - | CPM | chr12 | 69351458 | - |
5UTR-intron | ENST00000416623 | ENST00000551568 | PLAGL1 | chr6 | 144281606 | - | CPM | chr12 | 69351458 | - |
5UTR-intron | ENST00000416623 | ENST00000338356 | PLAGL1 | chr6 | 144281606 | - | CPM | chr12 | 69351458 | - |
5UTR-5UTR | ENST00000416623 | ENST00000549691 | PLAGL1 | chr6 | 144281606 | - | CPM | chr12 | 69351458 | - |
5UTR-intron | ENST00000392309 | ENST00000546373 | PLAGL1 | chr6 | 144281606 | - | CPM | chr12 | 69351458 | - |
5UTR-intron | ENST00000392309 | ENST00000551568 | PLAGL1 | chr6 | 144281606 | - | CPM | chr12 | 69351458 | - |
5UTR-intron | ENST00000392309 | ENST00000338356 | PLAGL1 | chr6 | 144281606 | - | CPM | chr12 | 69351458 | - |
5UTR-5UTR | ENST00000392309 | ENST00000549691 | PLAGL1 | chr6 | 144281606 | - | CPM | chr12 | 69351458 | - |
5UTR-intron | ENST00000392307 | ENST00000546373 | PLAGL1 | chr6 | 144281606 | - | CPM | chr12 | 69351458 | - |
5UTR-intron | ENST00000392307 | ENST00000551568 | PLAGL1 | chr6 | 144281606 | - | CPM | chr12 | 69351458 | - |
5UTR-intron | ENST00000392307 | ENST00000338356 | PLAGL1 | chr6 | 144281606 | - | CPM | chr12 | 69351458 | - |
5UTR-5UTR | ENST00000392307 | ENST00000549691 | PLAGL1 | chr6 | 144281606 | - | CPM | chr12 | 69351458 | - |
5UTR-intron | ENST00000437412 | ENST00000546373 | PLAGL1 | chr6 | 144281606 | - | CPM | chr12 | 69351458 | - |
5UTR-intron | ENST00000437412 | ENST00000551568 | PLAGL1 | chr6 | 144281606 | - | CPM | chr12 | 69351458 | - |
5UTR-intron | ENST00000437412 | ENST00000338356 | PLAGL1 | chr6 | 144281606 | - | CPM | chr12 | 69351458 | - |
5UTR-5UTR | ENST00000437412 | ENST00000549691 | PLAGL1 | chr6 | 144281606 | - | CPM | chr12 | 69351458 | - |
5UTR-intron | ENST00000444202 | ENST00000546373 | PLAGL1 | chr6 | 144281606 | - | CPM | chr12 | 69351458 | - |
5UTR-intron | ENST00000444202 | ENST00000551568 | PLAGL1 | chr6 | 144281606 | - | CPM | chr12 | 69351458 | - |
5UTR-intron | ENST00000444202 | ENST00000338356 | PLAGL1 | chr6 | 144281606 | - | CPM | chr12 | 69351458 | - |
5UTR-5UTR | ENST00000444202 | ENST00000549691 | PLAGL1 | chr6 | 144281606 | - | CPM | chr12 | 69351458 | - |
intron-intron | ENST00000493898 | ENST00000546373 | PLAGL1 | chr6 | 144281606 | - | CPM | chr12 | 69351458 | - |
intron-intron | ENST00000493898 | ENST00000551568 | PLAGL1 | chr6 | 144281606 | - | CPM | chr12 | 69351458 | - |
intron-intron | ENST00000493898 | ENST00000338356 | PLAGL1 | chr6 | 144281606 | - | CPM | chr12 | 69351458 | - |
intron-5UTR | ENST00000493898 | ENST00000549691 | PLAGL1 | chr6 | 144281606 | - | CPM | chr12 | 69351458 | - |
5UTR-intron | ENST00000360537 | ENST00000546373 | PLAGL1 | chr6 | 144281606 | - | CPM | chr12 | 69351458 | - |
5UTR-intron | ENST00000360537 | ENST00000551568 | PLAGL1 | chr6 | 144281606 | - | CPM | chr12 | 69351458 | - |
5UTR-intron | ENST00000360537 | ENST00000338356 | PLAGL1 | chr6 | 144281606 | - | CPM | chr12 | 69351458 | - |
5UTR-5UTR | ENST00000360537 | ENST00000549691 | PLAGL1 | chr6 | 144281606 | - | CPM | chr12 | 69351458 | - |
5UTR-intron | ENST00000354765 | ENST00000546373 | PLAGL1 | chr6 | 144281606 | - | CPM | chr12 | 69351458 | - |
5UTR-intron | ENST00000354765 | ENST00000551568 | PLAGL1 | chr6 | 144281606 | - | CPM | chr12 | 69351458 | - |
5UTR-intron | ENST00000354765 | ENST00000338356 | PLAGL1 | chr6 | 144281606 | - | CPM | chr12 | 69351458 | - |
5UTR-5UTR | ENST00000354765 | ENST00000549691 | PLAGL1 | chr6 | 144281606 | - | CPM | chr12 | 69351458 | - |
5UTR-intron | ENST00000367572 | ENST00000546373 | PLAGL1 | chr6 | 144281606 | - | CPM | chr12 | 69351458 | - |
5UTR-intron | ENST00000367572 | ENST00000551568 | PLAGL1 | chr6 | 144281606 | - | CPM | chr12 | 69351458 | - |
5UTR-intron | ENST00000367572 | ENST00000338356 | PLAGL1 | chr6 | 144281606 | - | CPM | chr12 | 69351458 | - |
5UTR-5UTR | ENST00000367572 | ENST00000549691 | PLAGL1 | chr6 | 144281606 | - | CPM | chr12 | 69351458 | - |
5UTR-intron | ENST00000367571 | ENST00000546373 | PLAGL1 | chr6 | 144281606 | - | CPM | chr12 | 69351458 | - |
5UTR-intron | ENST00000367571 | ENST00000551568 | PLAGL1 | chr6 | 144281606 | - | CPM | chr12 | 69351458 | - |
5UTR-intron | ENST00000367571 | ENST00000338356 | PLAGL1 | chr6 | 144281606 | - | CPM | chr12 | 69351458 | - |
5UTR-5UTR | ENST00000367571 | ENST00000549691 | PLAGL1 | chr6 | 144281606 | - | CPM | chr12 | 69351458 | - |
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FusionProtFeatures for PLAGL1_CPM |
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Hgene | Tgene |
PLAGL1 | CPM |
Specifically removes C-terminal basic residues (Arg orLys) from peptides and proteins. It is believed to play importantroles in the control of peptide hormone and growth factor activityat the cell surface, and in the membrane-localized degradation ofextracellular proteins. {ECO:0000269|PubMed:12457462}. |
![]() * Minus value of BPloci means that the break pointn is located before the CDS. |
- In-frame and retained protein feature among the 13 regional features. |
Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Protein feature | Protein feature note |
- In-frame and not-retained protein feature among the 13 regional features. |
Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Protein feature | Protein feature note |
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FusionGeneSequence for PLAGL1_CPM |
![]() (nt: nucleotides, aa: amino acids) |
* Fusion amino acid sequences. |
* Fusion transcript sequences (only coding sequence (CDS) region). |
* Fusion transcript sequences (Full-length transcript). |
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FusionGenePPI for PLAGL1_CPM |
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Hgene | Hgene's interactors | Tgene | Tgene's interactors |
PLAGL1 | TP53, DAXX, PML, EP300, CREBBP, HDAC1, UBE2I, PIAS2, SMAD3, TP73, KAT2B, TRIM25 | CPM | ELAVL1, CAPZA2, DBN1, FLNA, GAK, MYH9, PPP1CC, RAB7A, PDLIM7, ATP6AP2, SYNPO, MAPRE1, GOLT1B, LIMA1, ANLN, MYO19, ZSCAN12, ULBP1, FTH1, TBC1D22B, GTPBP3 |
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Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Still interaction with |
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Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Interaction lost with |
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Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Interaction lost with |
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RelatedDrugs for PLAGL1_CPM |
![]() (DrugBank Version 5.1.0 2018-04-02) |
Partner | Gene | UniProtAcc | DrugBank ID | Drug name | Drug activity | Drug type | Drug status |
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RelatedDiseases for PLAGL1_CPM |
![]() (DisGeNet 4.0) |
Partner | Gene | Disease ID | Disease name | # pubmeds | Source |
Hgene | PLAGL1 | C0038356 | Stomach Neoplasms | 1 | CTD_human |
Tgene | CPM | C0014175 | Endometriosis | 1 | CTD_human |
Tgene | CPM | C0037116 | Silicosis | 1 | CTD_human |