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Fusion gene ID: 27252 |
FusionGeneSummary for PIP4K2A_ABLIM1 |
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Fusion gene information | Fusion gene name: PIP4K2A_ABLIM1 | Fusion gene ID: 27252 | Hgene | Tgene | Gene symbol | PIP4K2A | ABLIM1 | Gene ID | 5305 | 3983 |
Gene name | phosphatidylinositol-5-phosphate 4-kinase type 2 alpha | actin binding LIM protein 1 | |
Synonyms | PI5P4KA|PIP5K2A|PIP5KII-alpha|PIP5KIIA|PIPK | ABLIM|LIMAB1|LIMATIN|abLIM-1 | |
Cytomap | 10p12.2 | 10q25.3 | |
Type of gene | protein-coding | protein-coding | |
Description | phosphatidylinositol 5-phosphate 4-kinase type-2 alpha1-phosphatidylinositol 5-phosphate 4-kinase 2-alpha1-phosphatidylinositol-4-phosphate kinase1-phosphatidylinositol-4-phosphate-5-kinasePI(5)P 4-kinase type II alphaPIP4KII-alphaPIP5KIIIPIP5KIIal | actin-binding LIM protein 1actin-binding LIM protein family member 1actin-binding double-zinc-finger protein | |
Modification date | 20180522 | 20180523 | |
UniProtAcc | P48426 | O14639 | |
Ensembl transtripts involved in fusion gene | ENST00000376573, ENST00000545335, ENST00000323883, ENST00000422321, | ENST00000369252, ENST00000533213, ENST00000277895, ENST00000369266, ENST00000392952, ENST00000369253, ENST00000477638, | |
Fusion gene scores | * DoF score | 4 X 4 X 3=48 | 7 X 7 X 3=147 |
# samples | 5 | 7 | |
** MAII score | log2(5/48*10)=0.0588936890535686 effective Gene in Pan-Cancer Fusion Genes (eGinPCFGs). DoF>8 and MAII>0 | log2(7/147*10)=-1.0703893278914 possibly effective Gene in Pan-Cancer Fusion Genes (peGinPCFGs). DoF>8 and MAII<0 | |
Context | PubMed: PIP4K2A [Title/Abstract] AND ABLIM1 [Title/Abstract] AND fusion [Title/Abstract] | ||
Functional or gene categories assigned by FusionGDB annotation |
* DoF score (Degree of Frequency) = # partners X # break points X # cancer types ** MAII score (Major Active Isofusion Index) = log2(# samples/DoF score*10) |
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Partner | Gene | GO ID | GO term | PubMed ID |
![]() (ChiTars (NAR, 2018), tumorfusions (NAR, 2018), Gao et al. (Cell, 2018)) * All genome coordinats were lifted-over on hg19. * Click on the break point to see the gene structure around the break point region using the UCSC Genome Browser. |
Data type | Source | Cancer type | Sample | Hgene | Hchr | Hbp | Hstrand | Tgene | Tchr | Tbp | Tstrand |
TCGA | RV | KIRC | TCGA-B0-4696-01A | PIP4K2A | chr10 | 22880558 | - | ABLIM1 | chr10 | 116361720 | - |
* LD: Li Ding group's fusion gene list RV: Roel Verhaak group's fusion gene list ChiTaRs fusion database |
![]() * Click on the break point to see the gene structure around the break point region using the UCSC Genome Browser. |
ORF | Henst | Tenst | Hgene | Hchr | Hbp | Hstrand | Tgene | Tchr | Tbp | Tstrand |
Frame-shift | ENST00000376573 | ENST00000369252 | PIP4K2A | chr10 | 22880558 | - | ABLIM1 | chr10 | 116361720 | - |
Frame-shift | ENST00000376573 | ENST00000533213 | PIP4K2A | chr10 | 22880558 | - | ABLIM1 | chr10 | 116361720 | - |
Frame-shift | ENST00000376573 | ENST00000277895 | PIP4K2A | chr10 | 22880558 | - | ABLIM1 | chr10 | 116361720 | - |
5CDS-intron | ENST00000376573 | ENST00000369266 | PIP4K2A | chr10 | 22880558 | - | ABLIM1 | chr10 | 116361720 | - |
5CDS-intron | ENST00000376573 | ENST00000392952 | PIP4K2A | chr10 | 22880558 | - | ABLIM1 | chr10 | 116361720 | - |
5CDS-intron | ENST00000376573 | ENST00000369253 | PIP4K2A | chr10 | 22880558 | - | ABLIM1 | chr10 | 116361720 | - |
5CDS-5UTR | ENST00000376573 | ENST00000477638 | PIP4K2A | chr10 | 22880558 | - | ABLIM1 | chr10 | 116361720 | - |
Frame-shift | ENST00000545335 | ENST00000369252 | PIP4K2A | chr10 | 22880558 | - | ABLIM1 | chr10 | 116361720 | - |
Frame-shift | ENST00000545335 | ENST00000533213 | PIP4K2A | chr10 | 22880558 | - | ABLIM1 | chr10 | 116361720 | - |
Frame-shift | ENST00000545335 | ENST00000277895 | PIP4K2A | chr10 | 22880558 | - | ABLIM1 | chr10 | 116361720 | - |
5CDS-intron | ENST00000545335 | ENST00000369266 | PIP4K2A | chr10 | 22880558 | - | ABLIM1 | chr10 | 116361720 | - |
5CDS-intron | ENST00000545335 | ENST00000392952 | PIP4K2A | chr10 | 22880558 | - | ABLIM1 | chr10 | 116361720 | - |
5CDS-intron | ENST00000545335 | ENST00000369253 | PIP4K2A | chr10 | 22880558 | - | ABLIM1 | chr10 | 116361720 | - |
5CDS-5UTR | ENST00000545335 | ENST00000477638 | PIP4K2A | chr10 | 22880558 | - | ABLIM1 | chr10 | 116361720 | - |
Frame-shift | ENST00000323883 | ENST00000369252 | PIP4K2A | chr10 | 22880558 | - | ABLIM1 | chr10 | 116361720 | - |
Frame-shift | ENST00000323883 | ENST00000533213 | PIP4K2A | chr10 | 22880558 | - | ABLIM1 | chr10 | 116361720 | - |
Frame-shift | ENST00000323883 | ENST00000277895 | PIP4K2A | chr10 | 22880558 | - | ABLIM1 | chr10 | 116361720 | - |
5CDS-intron | ENST00000323883 | ENST00000369266 | PIP4K2A | chr10 | 22880558 | - | ABLIM1 | chr10 | 116361720 | - |
5CDS-intron | ENST00000323883 | ENST00000392952 | PIP4K2A | chr10 | 22880558 | - | ABLIM1 | chr10 | 116361720 | - |
5CDS-intron | ENST00000323883 | ENST00000369253 | PIP4K2A | chr10 | 22880558 | - | ABLIM1 | chr10 | 116361720 | - |
5CDS-5UTR | ENST00000323883 | ENST00000477638 | PIP4K2A | chr10 | 22880558 | - | ABLIM1 | chr10 | 116361720 | - |
5UTR-3CDS | ENST00000422321 | ENST00000369252 | PIP4K2A | chr10 | 22880558 | - | ABLIM1 | chr10 | 116361720 | - |
5UTR-3CDS | ENST00000422321 | ENST00000533213 | PIP4K2A | chr10 | 22880558 | - | ABLIM1 | chr10 | 116361720 | - |
5UTR-3CDS | ENST00000422321 | ENST00000277895 | PIP4K2A | chr10 | 22880558 | - | ABLIM1 | chr10 | 116361720 | - |
5UTR-intron | ENST00000422321 | ENST00000369266 | PIP4K2A | chr10 | 22880558 | - | ABLIM1 | chr10 | 116361720 | - |
5UTR-intron | ENST00000422321 | ENST00000392952 | PIP4K2A | chr10 | 22880558 | - | ABLIM1 | chr10 | 116361720 | - |
5UTR-intron | ENST00000422321 | ENST00000369253 | PIP4K2A | chr10 | 22880558 | - | ABLIM1 | chr10 | 116361720 | - |
5UTR-5UTR | ENST00000422321 | ENST00000477638 | PIP4K2A | chr10 | 22880558 | - | ABLIM1 | chr10 | 116361720 | - |
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FusionProtFeatures for PIP4K2A_ABLIM1 |
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Hgene | Tgene |
PIP4K2A | ABLIM1 |
Catalyzes the phosphorylation of phosphatidylinositol 5-phosphate (PtdIns5P) on the fourth hydroxyl of the myo-inositolring, to form phosphatidylinositol 4,5-bisphosphate(PtdIns(4,5)P2). May exert its function by regulating the levelsof PtdIns5P, which functions in the cytosol by increasing AKTactivity and in the nucleus signals through ING2. May regulate thepool of cytosolic PtdIns5P in response to the activation oftyrosine phosphorylation. May negatively regulate insulin-stimulated glucose uptake by lowering the levels of PtdIns5P. Maybe involved in thrombopoiesis, and the terminal maturation ofmegakaryocytes and regulation of their size.{ECO:0000269|PubMed:18364242}. |
![]() * Minus value of BPloci means that the break pointn is located before the CDS. |
- In-frame and retained protein feature among the 13 regional features. |
Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Protein feature | Protein feature note |
- In-frame and not-retained protein feature among the 13 regional features. |
Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Protein feature | Protein feature note |
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FusionGeneSequence for PIP4K2A_ABLIM1 |
![]() (nt: nucleotides, aa: amino acids) |
* Fusion amino acid sequences. |
* Fusion transcript sequences (only coding sequence (CDS) region). |
* Fusion transcript sequences (Full-length transcript). |
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FusionGenePPI for PIP4K2A_ABLIM1 |
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Hgene | Hgene's interactors | Tgene | Tgene's interactors |
PIP4K2A | GRK5, GSTK1, CSNK2A2, ARL6IP4, EAF1, ZRANB2, EPB41L3, CSNK2A1, CSNK2B, DDX23, MTPN, PRPF8, SKP1, KRAS, IFI16, MED4, RPS6KB1, PIP4K2B, DIP2C, UBTF, AFF3, RTF1, AFF4, HDGFRP2, BRD3, MLLT3, PIP4K2C, PNISR, MEX3B, STRADA, MLLT1, AFF1, ELL3, BRD2, GPATCH8, CHD9, AHCYL2, STK11, BRD4, NAF1, GPALPP1, MEX3C, PIP5K1A, EAF2, BRPF1, GPBP1L1, ACIN1, SETD1B, RNPS1, ELL2, AHCYL1, KANK1, CWC22, LENG8, RAD18, PPRC1, STRADB, C12orf43, DNAJC13, PLCD3, NFKBIL1, CAB39, AP3B1, NOLC1, PNN, RFWD3, ELL, CLASRP, PPIG, JMJD6, CXXC1, SBF1, LZTS2, CCNT1, GTF2F1, IWS1, EDC4, SRSF8, C11orf31, ARHGAP22, TCOF1, SRRM2, CCDC102A, WDR26, AP3M1, C18orf25, PRICKLE3, SETD2, SPEN, TMEM194A, NOS1AP, MTMR1, CHD8, EPB41L5, PIN1, ST6GAL1, NKAP, CCDC9, RAB11FIP1, ZNF428, SUN2 | ABLIM1 | VIM, GOLGA2, BEGAIN, TRAF2, LDOC1, TSC22D4, USHBP1, CALCOCO2, HOOK2, KRT15, SFN, KCNJ12, SREBF2, ACTB, APP, ABRA, YWHAE, YWHAB, ASB18, CARD9, CCDC8, SUZ12, CASK, LUZP4, ABCE1, NMT1, SEPSECS, LIN7C, KIAA0753, SSX2IP, CEP128, CEP89, FBF1, NINL, ODF2, SCLT1, CEP19, STIL, CENPJ, XPO1, CAPZA2, CDK2, DBN1, FLNA, MYH9, MYO1C, PPP1CB, IQGAP1, PDLIM7, SYNPO, MAPRE1, LIMA1, ANLN, MYO19, MYO18A, CDH1, CYB5D2, KLHL40, BCO1, MED21, YWHAZ, CBY1, CYLD, TRIM25 |
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Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Still interaction with |
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Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Interaction lost with |
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Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Interaction lost with |
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RelatedDrugs for PIP4K2A_ABLIM1 |
![]() (DrugBank Version 5.1.0 2018-04-02) |
Partner | Gene | UniProtAcc | DrugBank ID | Drug name | Drug activity | Drug type | Drug status |
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RelatedDiseases for PIP4K2A_ABLIM1 |
![]() (DisGeNet 4.0) |
Partner | Gene | Disease ID | Disease name | # pubmeds | Source |
Hgene | PIP4K2A | C0036341 | Schizophrenia | 4 | PSYGENET |
Hgene | PIP4K2A | C0005586 | Bipolar Disorder | 3 | PSYGENET |
Hgene | PIP4K2A | C0025202 | melanoma | 1 | CTD_human |
Tgene | ABLIM1 | C0236969 | Substance-Related Disorders | 1 | CTD_human |