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Fusion gene ID: 27029 |
FusionGeneSummary for PHTF1_ESRRG |
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Fusion gene information | Fusion gene name: PHTF1_ESRRG | Fusion gene ID: 27029 | Hgene | Tgene | Gene symbol | PHTF1 | ESRRG | Gene ID | 10745 | 2104 |
Gene name | putative homeodomain transcription factor 1 | estrogen related receptor gamma | |
Synonyms | PHTF | ERR-gamma|ERR3|ERRg|ERRgamma|NR3B3 | |
Cytomap | 1p13.2 | 1q41 | |
Type of gene | protein-coding | protein-coding | |
Description | putative homeodomain transcription factor 1 | estrogen-related receptor gammaERR gamma-2estrogen receptor-related protein 3nuclear receptor subfamily 3 group B member 3 | |
Modification date | 20180519 | 20180519 | |
UniProtAcc | Q9UMS5 | P62508 | |
Ensembl transtripts involved in fusion gene | ENST00000393357, ENST00000369596, ENST00000369598, ENST00000369600, ENST00000369604, ENST00000357783, ENST00000447664, ENST00000474926, | ENST00000361525, ENST00000366940, ENST00000361395, ENST00000366938, ENST00000359162, ENST00000493603, ENST00000463665, ENST00000487276, ENST00000493748, ENST00000471371, ENST00000391890, ENST00000366937, ENST00000408911, ENST00000360012, | |
Fusion gene scores | * DoF score | 1 X 1 X 1=1 | 5 X 4 X 4=80 |
# samples | 1 | 5 | |
** MAII score | log2(1/1*10)=3.32192809488736 | log2(5/80*10)=-0.678071905112638 possibly effective Gene in Pan-Cancer Fusion Genes (peGinPCFGs). DoF>8 and MAII<0 | |
Context | PubMed: PHTF1 [Title/Abstract] AND ESRRG [Title/Abstract] AND fusion [Title/Abstract] | ||
Functional or gene categories assigned by FusionGDB annotation |
* DoF score (Degree of Frequency) = # partners X # break points X # cancer types ** MAII score (Major Active Isofusion Index) = log2(# samples/DoF score*10) |
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Partner | Gene | GO ID | GO term | PubMed ID |
Tgene | ESRRG | GO:0006355 | regulation of transcription, DNA-templated | 23836911 |
![]() (ChiTars (NAR, 2018), tumorfusions (NAR, 2018), Gao et al. (Cell, 2018)) * All genome coordinats were lifted-over on hg19. * Click on the break point to see the gene structure around the break point region using the UCSC Genome Browser. |
Data type | Source | Cancer type | Sample | Hgene | Hchr | Hbp | Hstrand | Tgene | Tchr | Tbp | Tstrand |
TCGA | RV | MESO | TCGA-TS-A7P1-01A | PHTF1 | chr1 | 114300321 | - | ESRRG | chr1 | 217113015 | - |
* LD: Li Ding group's fusion gene list RV: Roel Verhaak group's fusion gene list ChiTaRs fusion database |
![]() * Click on the break point to see the gene structure around the break point region using the UCSC Genome Browser. |
ORF | Henst | Tenst | Hgene | Hchr | Hbp | Hstrand | Tgene | Tchr | Tbp | Tstrand |
5CDS-5UTR | ENST00000393357 | ENST00000361525 | PHTF1 | chr1 | 114300321 | - | ESRRG | chr1 | 217113015 | - |
5CDS-5UTR | ENST00000393357 | ENST00000366940 | PHTF1 | chr1 | 114300321 | - | ESRRG | chr1 | 217113015 | - |
5CDS-5UTR | ENST00000393357 | ENST00000361395 | PHTF1 | chr1 | 114300321 | - | ESRRG | chr1 | 217113015 | - |
5CDS-5UTR | ENST00000393357 | ENST00000366938 | PHTF1 | chr1 | 114300321 | - | ESRRG | chr1 | 217113015 | - |
5CDS-5UTR | ENST00000393357 | ENST00000359162 | PHTF1 | chr1 | 114300321 | - | ESRRG | chr1 | 217113015 | - |
5CDS-5UTR | ENST00000393357 | ENST00000493603 | PHTF1 | chr1 | 114300321 | - | ESRRG | chr1 | 217113015 | - |
5CDS-intron | ENST00000393357 | ENST00000463665 | PHTF1 | chr1 | 114300321 | - | ESRRG | chr1 | 217113015 | - |
5CDS-intron | ENST00000393357 | ENST00000487276 | PHTF1 | chr1 | 114300321 | - | ESRRG | chr1 | 217113015 | - |
5CDS-5UTR | ENST00000393357 | ENST00000493748 | PHTF1 | chr1 | 114300321 | - | ESRRG | chr1 | 217113015 | - |
5CDS-5UTR | ENST00000393357 | ENST00000471371 | PHTF1 | chr1 | 114300321 | - | ESRRG | chr1 | 217113015 | - |
5CDS-intron | ENST00000393357 | ENST00000391890 | PHTF1 | chr1 | 114300321 | - | ESRRG | chr1 | 217113015 | - |
5CDS-intron | ENST00000393357 | ENST00000366937 | PHTF1 | chr1 | 114300321 | - | ESRRG | chr1 | 217113015 | - |
5CDS-intron | ENST00000393357 | ENST00000408911 | PHTF1 | chr1 | 114300321 | - | ESRRG | chr1 | 217113015 | - |
5CDS-intron | ENST00000393357 | ENST00000360012 | PHTF1 | chr1 | 114300321 | - | ESRRG | chr1 | 217113015 | - |
5CDS-5UTR | ENST00000369596 | ENST00000361525 | PHTF1 | chr1 | 114300321 | - | ESRRG | chr1 | 217113015 | - |
5CDS-5UTR | ENST00000369596 | ENST00000366940 | PHTF1 | chr1 | 114300321 | - | ESRRG | chr1 | 217113015 | - |
5CDS-5UTR | ENST00000369596 | ENST00000361395 | PHTF1 | chr1 | 114300321 | - | ESRRG | chr1 | 217113015 | - |
5CDS-5UTR | ENST00000369596 | ENST00000366938 | PHTF1 | chr1 | 114300321 | - | ESRRG | chr1 | 217113015 | - |
5CDS-5UTR | ENST00000369596 | ENST00000359162 | PHTF1 | chr1 | 114300321 | - | ESRRG | chr1 | 217113015 | - |
5CDS-5UTR | ENST00000369596 | ENST00000493603 | PHTF1 | chr1 | 114300321 | - | ESRRG | chr1 | 217113015 | - |
5CDS-intron | ENST00000369596 | ENST00000463665 | PHTF1 | chr1 | 114300321 | - | ESRRG | chr1 | 217113015 | - |
5CDS-intron | ENST00000369596 | ENST00000487276 | PHTF1 | chr1 | 114300321 | - | ESRRG | chr1 | 217113015 | - |
5CDS-5UTR | ENST00000369596 | ENST00000493748 | PHTF1 | chr1 | 114300321 | - | ESRRG | chr1 | 217113015 | - |
5CDS-5UTR | ENST00000369596 | ENST00000471371 | PHTF1 | chr1 | 114300321 | - | ESRRG | chr1 | 217113015 | - |
5CDS-intron | ENST00000369596 | ENST00000391890 | PHTF1 | chr1 | 114300321 | - | ESRRG | chr1 | 217113015 | - |
5CDS-intron | ENST00000369596 | ENST00000366937 | PHTF1 | chr1 | 114300321 | - | ESRRG | chr1 | 217113015 | - |
5CDS-intron | ENST00000369596 | ENST00000408911 | PHTF1 | chr1 | 114300321 | - | ESRRG | chr1 | 217113015 | - |
5CDS-intron | ENST00000369596 | ENST00000360012 | PHTF1 | chr1 | 114300321 | - | ESRRG | chr1 | 217113015 | - |
5CDS-5UTR | ENST00000369598 | ENST00000361525 | PHTF1 | chr1 | 114300321 | - | ESRRG | chr1 | 217113015 | - |
5CDS-5UTR | ENST00000369598 | ENST00000366940 | PHTF1 | chr1 | 114300321 | - | ESRRG | chr1 | 217113015 | - |
5CDS-5UTR | ENST00000369598 | ENST00000361395 | PHTF1 | chr1 | 114300321 | - | ESRRG | chr1 | 217113015 | - |
5CDS-5UTR | ENST00000369598 | ENST00000366938 | PHTF1 | chr1 | 114300321 | - | ESRRG | chr1 | 217113015 | - |
5CDS-5UTR | ENST00000369598 | ENST00000359162 | PHTF1 | chr1 | 114300321 | - | ESRRG | chr1 | 217113015 | - |
5CDS-5UTR | ENST00000369598 | ENST00000493603 | PHTF1 | chr1 | 114300321 | - | ESRRG | chr1 | 217113015 | - |
5CDS-intron | ENST00000369598 | ENST00000463665 | PHTF1 | chr1 | 114300321 | - | ESRRG | chr1 | 217113015 | - |
5CDS-intron | ENST00000369598 | ENST00000487276 | PHTF1 | chr1 | 114300321 | - | ESRRG | chr1 | 217113015 | - |
5CDS-5UTR | ENST00000369598 | ENST00000493748 | PHTF1 | chr1 | 114300321 | - | ESRRG | chr1 | 217113015 | - |
5CDS-5UTR | ENST00000369598 | ENST00000471371 | PHTF1 | chr1 | 114300321 | - | ESRRG | chr1 | 217113015 | - |
5CDS-intron | ENST00000369598 | ENST00000391890 | PHTF1 | chr1 | 114300321 | - | ESRRG | chr1 | 217113015 | - |
5CDS-intron | ENST00000369598 | ENST00000366937 | PHTF1 | chr1 | 114300321 | - | ESRRG | chr1 | 217113015 | - |
5CDS-intron | ENST00000369598 | ENST00000408911 | PHTF1 | chr1 | 114300321 | - | ESRRG | chr1 | 217113015 | - |
5CDS-intron | ENST00000369598 | ENST00000360012 | PHTF1 | chr1 | 114300321 | - | ESRRG | chr1 | 217113015 | - |
5CDS-5UTR | ENST00000369600 | ENST00000361525 | PHTF1 | chr1 | 114300321 | - | ESRRG | chr1 | 217113015 | - |
5CDS-5UTR | ENST00000369600 | ENST00000366940 | PHTF1 | chr1 | 114300321 | - | ESRRG | chr1 | 217113015 | - |
5CDS-5UTR | ENST00000369600 | ENST00000361395 | PHTF1 | chr1 | 114300321 | - | ESRRG | chr1 | 217113015 | - |
5CDS-5UTR | ENST00000369600 | ENST00000366938 | PHTF1 | chr1 | 114300321 | - | ESRRG | chr1 | 217113015 | - |
5CDS-5UTR | ENST00000369600 | ENST00000359162 | PHTF1 | chr1 | 114300321 | - | ESRRG | chr1 | 217113015 | - |
5CDS-5UTR | ENST00000369600 | ENST00000493603 | PHTF1 | chr1 | 114300321 | - | ESRRG | chr1 | 217113015 | - |
5CDS-intron | ENST00000369600 | ENST00000463665 | PHTF1 | chr1 | 114300321 | - | ESRRG | chr1 | 217113015 | - |
5CDS-intron | ENST00000369600 | ENST00000487276 | PHTF1 | chr1 | 114300321 | - | ESRRG | chr1 | 217113015 | - |
5CDS-5UTR | ENST00000369600 | ENST00000493748 | PHTF1 | chr1 | 114300321 | - | ESRRG | chr1 | 217113015 | - |
5CDS-5UTR | ENST00000369600 | ENST00000471371 | PHTF1 | chr1 | 114300321 | - | ESRRG | chr1 | 217113015 | - |
5CDS-intron | ENST00000369600 | ENST00000391890 | PHTF1 | chr1 | 114300321 | - | ESRRG | chr1 | 217113015 | - |
5CDS-intron | ENST00000369600 | ENST00000366937 | PHTF1 | chr1 | 114300321 | - | ESRRG | chr1 | 217113015 | - |
5CDS-intron | ENST00000369600 | ENST00000408911 | PHTF1 | chr1 | 114300321 | - | ESRRG | chr1 | 217113015 | - |
5CDS-intron | ENST00000369600 | ENST00000360012 | PHTF1 | chr1 | 114300321 | - | ESRRG | chr1 | 217113015 | - |
5CDS-5UTR | ENST00000369604 | ENST00000361525 | PHTF1 | chr1 | 114300321 | - | ESRRG | chr1 | 217113015 | - |
5CDS-5UTR | ENST00000369604 | ENST00000366940 | PHTF1 | chr1 | 114300321 | - | ESRRG | chr1 | 217113015 | - |
5CDS-5UTR | ENST00000369604 | ENST00000361395 | PHTF1 | chr1 | 114300321 | - | ESRRG | chr1 | 217113015 | - |
5CDS-5UTR | ENST00000369604 | ENST00000366938 | PHTF1 | chr1 | 114300321 | - | ESRRG | chr1 | 217113015 | - |
5CDS-5UTR | ENST00000369604 | ENST00000359162 | PHTF1 | chr1 | 114300321 | - | ESRRG | chr1 | 217113015 | - |
5CDS-5UTR | ENST00000369604 | ENST00000493603 | PHTF1 | chr1 | 114300321 | - | ESRRG | chr1 | 217113015 | - |
5CDS-intron | ENST00000369604 | ENST00000463665 | PHTF1 | chr1 | 114300321 | - | ESRRG | chr1 | 217113015 | - |
5CDS-intron | ENST00000369604 | ENST00000487276 | PHTF1 | chr1 | 114300321 | - | ESRRG | chr1 | 217113015 | - |
5CDS-5UTR | ENST00000369604 | ENST00000493748 | PHTF1 | chr1 | 114300321 | - | ESRRG | chr1 | 217113015 | - |
5CDS-5UTR | ENST00000369604 | ENST00000471371 | PHTF1 | chr1 | 114300321 | - | ESRRG | chr1 | 217113015 | - |
5CDS-intron | ENST00000369604 | ENST00000391890 | PHTF1 | chr1 | 114300321 | - | ESRRG | chr1 | 217113015 | - |
5CDS-intron | ENST00000369604 | ENST00000366937 | PHTF1 | chr1 | 114300321 | - | ESRRG | chr1 | 217113015 | - |
5CDS-intron | ENST00000369604 | ENST00000408911 | PHTF1 | chr1 | 114300321 | - | ESRRG | chr1 | 217113015 | - |
5CDS-intron | ENST00000369604 | ENST00000360012 | PHTF1 | chr1 | 114300321 | - | ESRRG | chr1 | 217113015 | - |
5CDS-5UTR | ENST00000357783 | ENST00000361525 | PHTF1 | chr1 | 114300321 | - | ESRRG | chr1 | 217113015 | - |
5CDS-5UTR | ENST00000357783 | ENST00000366940 | PHTF1 | chr1 | 114300321 | - | ESRRG | chr1 | 217113015 | - |
5CDS-5UTR | ENST00000357783 | ENST00000361395 | PHTF1 | chr1 | 114300321 | - | ESRRG | chr1 | 217113015 | - |
5CDS-5UTR | ENST00000357783 | ENST00000366938 | PHTF1 | chr1 | 114300321 | - | ESRRG | chr1 | 217113015 | - |
5CDS-5UTR | ENST00000357783 | ENST00000359162 | PHTF1 | chr1 | 114300321 | - | ESRRG | chr1 | 217113015 | - |
5CDS-5UTR | ENST00000357783 | ENST00000493603 | PHTF1 | chr1 | 114300321 | - | ESRRG | chr1 | 217113015 | - |
5CDS-intron | ENST00000357783 | ENST00000463665 | PHTF1 | chr1 | 114300321 | - | ESRRG | chr1 | 217113015 | - |
5CDS-intron | ENST00000357783 | ENST00000487276 | PHTF1 | chr1 | 114300321 | - | ESRRG | chr1 | 217113015 | - |
5CDS-5UTR | ENST00000357783 | ENST00000493748 | PHTF1 | chr1 | 114300321 | - | ESRRG | chr1 | 217113015 | - |
5CDS-5UTR | ENST00000357783 | ENST00000471371 | PHTF1 | chr1 | 114300321 | - | ESRRG | chr1 | 217113015 | - |
5CDS-intron | ENST00000357783 | ENST00000391890 | PHTF1 | chr1 | 114300321 | - | ESRRG | chr1 | 217113015 | - |
5CDS-intron | ENST00000357783 | ENST00000366937 | PHTF1 | chr1 | 114300321 | - | ESRRG | chr1 | 217113015 | - |
5CDS-intron | ENST00000357783 | ENST00000408911 | PHTF1 | chr1 | 114300321 | - | ESRRG | chr1 | 217113015 | - |
5CDS-intron | ENST00000357783 | ENST00000360012 | PHTF1 | chr1 | 114300321 | - | ESRRG | chr1 | 217113015 | - |
5CDS-5UTR | ENST00000447664 | ENST00000361525 | PHTF1 | chr1 | 114300321 | - | ESRRG | chr1 | 217113015 | - |
5CDS-5UTR | ENST00000447664 | ENST00000366940 | PHTF1 | chr1 | 114300321 | - | ESRRG | chr1 | 217113015 | - |
5CDS-5UTR | ENST00000447664 | ENST00000361395 | PHTF1 | chr1 | 114300321 | - | ESRRG | chr1 | 217113015 | - |
5CDS-5UTR | ENST00000447664 | ENST00000366938 | PHTF1 | chr1 | 114300321 | - | ESRRG | chr1 | 217113015 | - |
5CDS-5UTR | ENST00000447664 | ENST00000359162 | PHTF1 | chr1 | 114300321 | - | ESRRG | chr1 | 217113015 | - |
5CDS-5UTR | ENST00000447664 | ENST00000493603 | PHTF1 | chr1 | 114300321 | - | ESRRG | chr1 | 217113015 | - |
5CDS-intron | ENST00000447664 | ENST00000463665 | PHTF1 | chr1 | 114300321 | - | ESRRG | chr1 | 217113015 | - |
5CDS-intron | ENST00000447664 | ENST00000487276 | PHTF1 | chr1 | 114300321 | - | ESRRG | chr1 | 217113015 | - |
5CDS-5UTR | ENST00000447664 | ENST00000493748 | PHTF1 | chr1 | 114300321 | - | ESRRG | chr1 | 217113015 | - |
5CDS-5UTR | ENST00000447664 | ENST00000471371 | PHTF1 | chr1 | 114300321 | - | ESRRG | chr1 | 217113015 | - |
5CDS-intron | ENST00000447664 | ENST00000391890 | PHTF1 | chr1 | 114300321 | - | ESRRG | chr1 | 217113015 | - |
5CDS-intron | ENST00000447664 | ENST00000366937 | PHTF1 | chr1 | 114300321 | - | ESRRG | chr1 | 217113015 | - |
5CDS-intron | ENST00000447664 | ENST00000408911 | PHTF1 | chr1 | 114300321 | - | ESRRG | chr1 | 217113015 | - |
5CDS-intron | ENST00000447664 | ENST00000360012 | PHTF1 | chr1 | 114300321 | - | ESRRG | chr1 | 217113015 | - |
intron-5UTR | ENST00000474926 | ENST00000361525 | PHTF1 | chr1 | 114300321 | - | ESRRG | chr1 | 217113015 | - |
intron-5UTR | ENST00000474926 | ENST00000366940 | PHTF1 | chr1 | 114300321 | - | ESRRG | chr1 | 217113015 | - |
intron-5UTR | ENST00000474926 | ENST00000361395 | PHTF1 | chr1 | 114300321 | - | ESRRG | chr1 | 217113015 | - |
intron-5UTR | ENST00000474926 | ENST00000366938 | PHTF1 | chr1 | 114300321 | - | ESRRG | chr1 | 217113015 | - |
intron-5UTR | ENST00000474926 | ENST00000359162 | PHTF1 | chr1 | 114300321 | - | ESRRG | chr1 | 217113015 | - |
intron-5UTR | ENST00000474926 | ENST00000493603 | PHTF1 | chr1 | 114300321 | - | ESRRG | chr1 | 217113015 | - |
intron-intron | ENST00000474926 | ENST00000463665 | PHTF1 | chr1 | 114300321 | - | ESRRG | chr1 | 217113015 | - |
intron-intron | ENST00000474926 | ENST00000487276 | PHTF1 | chr1 | 114300321 | - | ESRRG | chr1 | 217113015 | - |
intron-5UTR | ENST00000474926 | ENST00000493748 | PHTF1 | chr1 | 114300321 | - | ESRRG | chr1 | 217113015 | - |
intron-5UTR | ENST00000474926 | ENST00000471371 | PHTF1 | chr1 | 114300321 | - | ESRRG | chr1 | 217113015 | - |
intron-intron | ENST00000474926 | ENST00000391890 | PHTF1 | chr1 | 114300321 | - | ESRRG | chr1 | 217113015 | - |
intron-intron | ENST00000474926 | ENST00000366937 | PHTF1 | chr1 | 114300321 | - | ESRRG | chr1 | 217113015 | - |
intron-intron | ENST00000474926 | ENST00000408911 | PHTF1 | chr1 | 114300321 | - | ESRRG | chr1 | 217113015 | - |
intron-intron | ENST00000474926 | ENST00000360012 | PHTF1 | chr1 | 114300321 | - | ESRRG | chr1 | 217113015 | - |
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FusionProtFeatures for PHTF1_ESRRG |
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Hgene | Tgene |
PHTF1 | ESRRG |
May play a role in transcription regulation. |
![]() * Minus value of BPloci means that the break pointn is located before the CDS. |
- In-frame and retained protein feature among the 13 regional features. |
Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Protein feature | Protein feature note |
- In-frame and not-retained protein feature among the 13 regional features. |
Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Protein feature | Protein feature note |
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FusionGeneSequence for PHTF1_ESRRG |
![]() (nt: nucleotides, aa: amino acids) |
* Fusion amino acid sequences. |
* Fusion transcript sequences (only coding sequence (CDS) region). |
* Fusion transcript sequences (Full-length transcript). |
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FusionGenePPI for PHTF1_ESRRG |
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Hgene | Hgene's interactors | Tgene | Tgene's interactors |
PHTF1 | HOXB9, CAPN5, GPR156, LYPD3, TRIM25 | ESRRG | ESRRG, NCOA1, HGS, ESRRA, NRIP1, SP1, PPARGC1A, NR0B2, PARK2, NR0B1, DUT, PROX1, EBP, PNRC1, PNRC2, ARHGEF15, TLE1, APP, SRA1, SRPK1, KIFC3, MEOX2, NUP160, KIAA1598, CCDC67, SUMO1P1, PSMC5, DNMT3L |
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Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Still interaction with |
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Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Interaction lost with |
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Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Interaction lost with |
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RelatedDrugs for PHTF1_ESRRG |
![]() (DrugBank Version 5.1.0 2018-04-02) |
Partner | Gene | UniProtAcc | DrugBank ID | Drug name | Drug activity | Drug type | Drug status |
Tgene | ESRRG | P62508 | DB00675 | Tamoxifen | Estrogen-related receptor gamma | small molecule | approved |
Tgene | ESRRG | P62508 | DB02659 | Cholic Acid | Estrogen-related receptor gamma | small molecule | approved |
Tgene | ESRRG | P62508 | DB00255 | Diethylstilbestrol | Estrogen-related receptor gamma | small molecule | approved|investigational |
Tgene | ESRRG | P62508 | DB00783 | Estradiol | Estrogen-related receptor gamma | small molecule | approved|investigational|vet_approved |
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RelatedDiseases for PHTF1_ESRRG |
![]() (DisGeNet 4.0) |
Partner | Gene | Disease ID | Disease name | # pubmeds | Source |