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Fusion gene ID: 27024 |
FusionGeneSummary for PHRF1_HCFC1R1 |
 Fusion gene summary |
| Fusion gene information | Fusion gene name: PHRF1_HCFC1R1 | Fusion gene ID: 27024 | Hgene | Tgene | Gene symbol | PHRF1 | HCFC1R1 | Gene ID | 57661 | 54985 |
| Gene name | PHD and ring finger domains 1 | host cell factor C1 regulator 1 | |
| Synonyms | PPP1R125|RNF221 | HPIP | |
| Cytomap | 11p15.5 | 16p13.3 | |
| Type of gene | protein-coding | protein-coding | |
| Description | PHD and RING finger domain-containing protein 1CTD-binding SR-like protein rA9protein phosphatase 1, regulatory subunit 125 | host cell factor C1 regulator 1HCF-1 beta-propeller-interacting proteinhost cell factor C1 regulator 1 (XPO1 dependent) | |
| Modification date | 20180519 | 20180519 | |
| UniProtAcc | Q9P1Y6 | Q9NWW0 | |
| Ensembl transtripts involved in fusion gene | ENST00000264555, ENST00000413872, ENST00000533464, ENST00000416188, | ENST00000248089, ENST00000574151, ENST00000396916, ENST00000572355, ENST00000574980, ENST00000354679, | |
| Fusion gene scores | * DoF score | 8 X 8 X 5=320 | 4 X 4 X 1=16 |
| # samples | 8 | 7 | |
| ** MAII score | log2(8/320*10)=-2 possibly effective Gene in Pan-Cancer Fusion Genes (peGinPCFGs). DoF>8 and MAII<0 | log2(7/16*10)=2.12928301694497 effective Gene in Pan-Cancer Fusion Genes (eGinPCFGs). DoF>8 and MAII>0 | |
| Context | PubMed: PHRF1 [Title/Abstract] AND HCFC1R1 [Title/Abstract] AND fusion [Title/Abstract] | ||
| Functional or gene categories assigned by FusionGDB annotation | |||
| * DoF score (Degree of Frequency) = # partners X # break points X # cancer types ** MAII score (Major Active Isofusion Index) = log2(# samples/DoF score*10) |
| Gene ontology of each fusion partner gene with evidence of Inferred from Direct Assay (IDA) from Entrez |
| Partner | Gene | GO ID | GO term | PubMed ID |
| Fusion gene information from three resources (ChiTars (NAR, 2018), tumorfusions (NAR, 2018), Gao et al. (Cell, 2018)) * All genome coordinats were lifted-over on hg19. * Click on the break point to see the gene structure around the break point region using the UCSC Genome Browser. |
| Data type | Source | Cancer type | Sample | Hgene | Hchr | Hbp | Hstrand | Tgene | Tchr | Tbp | Tstrand |
| ChiTaRS3.1 | AK308541 | PHRF1 | chr11 | 605724 | + | HCFC1R1 | chr16 | 3073535 | - |
| * LD: Li Ding group's fusion gene list RV: Roel Verhaak group's fusion gene list ChiTaRs fusion database |
| Open reading frame (ORF) analsis of fusion genes based on Ensembl gene isoform structure. * Click on the break point to see the gene structure around the break point region using the UCSC Genome Browser. |
| ORF | Henst | Tenst | Hgene | Hchr | Hbp | Hstrand | Tgene | Tchr | Tbp | Tstrand |
| In-frame | ENST00000264555 | ENST00000248089 | PHRF1 | chr11 | 605724 | + | HCFC1R1 | chr16 | 3073535 | - |
| 5CDS-intron | ENST00000264555 | ENST00000574151 | PHRF1 | chr11 | 605724 | + | HCFC1R1 | chr16 | 3073535 | - |
| 5CDS-intron | ENST00000264555 | ENST00000396916 | PHRF1 | chr11 | 605724 | + | HCFC1R1 | chr16 | 3073535 | - |
| 5CDS-5UTR | ENST00000264555 | ENST00000572355 | PHRF1 | chr11 | 605724 | + | HCFC1R1 | chr16 | 3073535 | - |
| 5CDS-5UTR | ENST00000264555 | ENST00000574980 | PHRF1 | chr11 | 605724 | + | HCFC1R1 | chr16 | 3073535 | - |
| 5CDS-intron | ENST00000264555 | ENST00000354679 | PHRF1 | chr11 | 605724 | + | HCFC1R1 | chr16 | 3073535 | - |
| In-frame | ENST00000413872 | ENST00000248089 | PHRF1 | chr11 | 605724 | + | HCFC1R1 | chr16 | 3073535 | - |
| 5CDS-intron | ENST00000413872 | ENST00000574151 | PHRF1 | chr11 | 605724 | + | HCFC1R1 | chr16 | 3073535 | - |
| 5CDS-intron | ENST00000413872 | ENST00000396916 | PHRF1 | chr11 | 605724 | + | HCFC1R1 | chr16 | 3073535 | - |
| 5CDS-5UTR | ENST00000413872 | ENST00000572355 | PHRF1 | chr11 | 605724 | + | HCFC1R1 | chr16 | 3073535 | - |
| 5CDS-5UTR | ENST00000413872 | ENST00000574980 | PHRF1 | chr11 | 605724 | + | HCFC1R1 | chr16 | 3073535 | - |
| 5CDS-intron | ENST00000413872 | ENST00000354679 | PHRF1 | chr11 | 605724 | + | HCFC1R1 | chr16 | 3073535 | - |
| In-frame | ENST00000533464 | ENST00000248089 | PHRF1 | chr11 | 605724 | + | HCFC1R1 | chr16 | 3073535 | - |
| 5CDS-intron | ENST00000533464 | ENST00000574151 | PHRF1 | chr11 | 605724 | + | HCFC1R1 | chr16 | 3073535 | - |
| 5CDS-intron | ENST00000533464 | ENST00000396916 | PHRF1 | chr11 | 605724 | + | HCFC1R1 | chr16 | 3073535 | - |
| 5CDS-5UTR | ENST00000533464 | ENST00000572355 | PHRF1 | chr11 | 605724 | + | HCFC1R1 | chr16 | 3073535 | - |
| 5CDS-5UTR | ENST00000533464 | ENST00000574980 | PHRF1 | chr11 | 605724 | + | HCFC1R1 | chr16 | 3073535 | - |
| 5CDS-intron | ENST00000533464 | ENST00000354679 | PHRF1 | chr11 | 605724 | + | HCFC1R1 | chr16 | 3073535 | - |
| In-frame | ENST00000416188 | ENST00000248089 | PHRF1 | chr11 | 605724 | + | HCFC1R1 | chr16 | 3073535 | - |
| 5CDS-intron | ENST00000416188 | ENST00000574151 | PHRF1 | chr11 | 605724 | + | HCFC1R1 | chr16 | 3073535 | - |
| 5CDS-intron | ENST00000416188 | ENST00000396916 | PHRF1 | chr11 | 605724 | + | HCFC1R1 | chr16 | 3073535 | - |
| 5CDS-5UTR | ENST00000416188 | ENST00000572355 | PHRF1 | chr11 | 605724 | + | HCFC1R1 | chr16 | 3073535 | - |
| 5CDS-5UTR | ENST00000416188 | ENST00000574980 | PHRF1 | chr11 | 605724 | + | HCFC1R1 | chr16 | 3073535 | - |
| 5CDS-intron | ENST00000416188 | ENST00000354679 | PHRF1 | chr11 | 605724 | + | HCFC1R1 | chr16 | 3073535 | - |
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FusionProtFeatures for PHRF1_HCFC1R1 |
| Main function of each fusion partner protein. (from UniProt) |
| Hgene | Tgene |
| PHRF1 | HCFC1R1 |
| Regulates HCFC1 activity by modulating its subcellularlocalization. Overexpression of HCFC1R1 leads to accumulation ofHCFC1 in the cytoplasm. HCFC1R1-mediated export may provide thepool of cytoplasmic HCFC1 required for import of virion-derivedVP16 into the nucleus. {ECO:0000269|PubMed:12235138}. |
| Retention analysis result of each fusion partner protein across 39 protein features of UniProt such as six molecule processing features, 13 region features, four site features, six amino acid modification features, two natural variation features, five experimental info features, and 3 secondary structure features. Here, because of limited space for viewing, we only show the protein feature retention information belong to the 13 regional features. All retention annotation result can be downloaded at . * Minus value of BPloci means that the break pointn is located before the CDS. |
| - In-frame and retained protein feature among the 13 regional features. |
| Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Protein feature | Protein feature note |
| Hgene | PHRF1 | chr11:605724 | chr16:3073535 | ENST00000264555 | + | 12 | 18 | 178_181 | 484 | 1650 | Compositional bias | Note=Poly-Glu |
| Hgene | PHRF1 | chr11:605724 | chr16:3073535 | ENST00000264555 | + | 12 | 18 | 262_401 | 484 | 1650 | Compositional bias | Note=Arg-rich |
| Hgene | PHRF1 | chr11:605724 | chr16:3073535 | ENST00000416188 | + | 12 | 18 | 178_181 | 483 | 1649 | Compositional bias | Note=Poly-Glu |
| Hgene | PHRF1 | chr11:605724 | chr16:3073535 | ENST00000416188 | + | 12 | 18 | 262_401 | 483 | 1649 | Compositional bias | Note=Arg-rich |
| Hgene | PHRF1 | chr11:605724 | chr16:3073535 | ENST00000264555 | + | 12 | 18 | 108_149 | 484 | 1650 | Zinc finger | RING-type%3B degenerate |
| Hgene | PHRF1 | chr11:605724 | chr16:3073535 | ENST00000264555 | + | 12 | 18 | 183_233 | 484 | 1650 | Zinc finger | PHD-type |
| Hgene | PHRF1 | chr11:605724 | chr16:3073535 | ENST00000416188 | + | 12 | 18 | 108_149 | 483 | 1649 | Zinc finger | RING-type%3B degenerate |
| Hgene | PHRF1 | chr11:605724 | chr16:3073535 | ENST00000416188 | + | 12 | 18 | 183_233 | 483 | 1649 | Zinc finger | PHD-type |
| Tgene | >HCFC1R1 | chr11:605724 | chr16:3073535 | ENST00000248089 | - | 0 | 4 | 110_119 | 31 | 139 | Motif | Note=Nuclear export signal |
| Tgene | >HCFC1R1 | chr11:605724 | chr16:3073535 | ENST00000396916 | - | 1 | 5 | 110_119 | 31 | 139 | Motif | Note=Nuclear export signal |
| Tgene | >HCFC1R1 | chr11:605724 | chr16:3073535 | ENST00000574151 | - | 0 | 3 | 110_119 | -7 | 120 | Motif | Note=Nuclear export signal |
| Tgene | >HCFC1R1 | chr11:605724 | chr16:3073535 | ENST00000574980 | - | 1 | 5 | 110_119 | 31 | 139 | Motif | Note=Nuclear export signal |
| - In-frame and not-retained protein feature among the 13 regional features. |
| Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Protein feature | Protein feature note |
| Hgene | >PHRF1 | chr11:605724 | chr16:3073535 | ENST00000264555 | + | 12 | 18 | 1549_1579 | 484 | 1650 | Coiled coil | Ontology_term=ECO:0000255 |
| Hgene | >PHRF1 | chr11:605724 | chr16:3073535 | ENST00000416188 | + | 12 | 18 | 1549_1579 | 483 | 1649 | Coiled coil | Ontology_term=ECO:0000255 |
| Hgene | >PHRF1 | chr11:605724 | chr16:3073535 | ENST00000264555 | + | 12 | 18 | 983_1181 | 484 | 1650 | Compositional bias | Note=Arg-rich |
| Hgene | >PHRF1 | chr11:605724 | chr16:3073535 | ENST00000416188 | + | 12 | 18 | 983_1181 | 483 | 1649 | Compositional bias | Note=Arg-rich |
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FusionGeneSequence for PHRF1_HCFC1R1 |
| For in-frame fusion transcripts, we provide the fusion transcript sequences and fusion amino acid sequences. (nt: nucleotides, aa: amino acids) |
| * Fusion amino acid sequences. |
| >In-frame_PHRF1_ENST00000264555_chr11_605724_+_HCFC1R1_ENST00000248089_chr16_3073535_-_592aa MDDDSLDELVARSPGPDGHPQVGPADPAGDFEESSVGSSGDSGDDSDSEHGDGTDGEDEGASEEEDLEDRSGSEDSEDDGETLLEVAGTQ GKLEAAGSFNSDDDAESCPICLNAFRDQAVGTPENCAHYFCLDCIVEWSKNANSCPVDRTLFKCICIRAQFGGKILRKIPVENTKASEEE EDPTFCEVCGRSDREDRLLLCDGCDAGYHMECLDPPLQEVPVDEWFCPECAAPGVVLAADAGPVSEEEVSLLLADVVPTTSRLRPRAGRT RAIARTRQSERVRATVNRNRISTARRVQHTPGRLGSSLLDEAIEAVATGLSTAVYQRPLTPRTPARRKRKTRRRKKVPGRKKTPSGPSAK SKSSATRSKKRQHRVKKRRGKKVKSEATTRSRIARTLGLRRPVHSSCIPSVLKPVEPSLGLLRADIGAASLSLFGDPYELDPFDSSEELS ANPLSPLSAKRRALSRSALQSHQPVARPVSVGLSSSPLRGAVPMSTKRRLEEEQEPLRKQFLSEENMATHFSQLSLHNDHPYCSPPMTFS >In-frame_PHRF1_ENST00000413872_chr11_605724_+_HCFC1R1_ENST00000248089_chr16_3073535_-_590aa MDDDSLDELVARSPGPDGHPQVGPADPAGDFESSVGSSGDSGDDSDSEHGDGTDGEDEGASEEEDLEDRSGSEDSEDDGETLLEVAGTQG KLEAAGSFNSDDDAESCPICLNAFRDQAVGTPENCAHYFCLDCIVEWSKNANSCPVDRTLFKCICIRAQFGGKILRKIPVENTKASEEEE DPTFCEVCGRSDREDRLLLCDGCDAGYHMECLDPPLQEVPVDEWFCPECAAPGVVLAADAGPVSEEEVSLLLADVVPTTSRLRPRAGRTR AIARTRQSERVRATVNRNRISTARRVQHTPGRLGSSLLDEAIEAVATGLSTAVYQRPLTPRTPARRKRKTRRRKKVPGRKKTPSGPSAKS KSSATRSKKRQHRVKKRRGKKVKSEATTRSRIARTLGLRRPVHSSCIPSVLKPVEPSLGLLRADIGAASLSLFGDPYELDPFDSEELSAN PLSPLSAKRRALSRSALQSHQPVARPVSVGLSSSPLRGAVPMSTKRRLEEEQEPLRKQFLSEENMATHFSQLSLHNDHPYCSPPMTFSPA >In-frame_PHRF1_ENST00000533464_chr11_605724_+_HCFC1R1_ENST00000248089_chr16_3073535_-_588aa MDDDSLDELVARSPGPDGHPQVGPADPAESSVGSSGDSGDDSDSEHGDGTDGEDEGASEEEDLEDRSGSEDSEDDGETLLEVAGTQGKLE AAGSFNSDDDAESCPICLNAFRDQAVGTPENCAHYFCLDCIVEWSKNANSCPVDRTLFKCICIRAQFGGKILRKIPVENTKASEEEEDPT FCEVCGRSDREDRLLLCDGCDAGYHMECLDPPLQEVPVDEWFCPECAAPGVVLAADAGPVSEEEVSLLLADVVPTTSRLRPRAGRTRAIA RTRQSERVRATVNRNRISTARRVQHTPGRLGSSLLDEAIEAVATGLSTAVYQRPLTPRTPARRKRKTRRRKKVPGRKKTPSGPSAKSKSS ATRSKKRQHRVKKRRGKKVKSEATTRSRIARTLGLRRPVHSSCIPSVLKPVEPSLGLLRADIGAASLSLFGDPYELDPFDSSEELSANPL SPLSAKRRALSRSALQSHQPVARPVSVGLSSSPLRGAVPMSTKRRLEEEQEPLRKQFLSEENMATHFSQLSLHNDHPYCSPPMTFSPALP >In-frame_PHRF1_ENST00000416188_chr11_605724_+_HCFC1R1_ENST00000248089_chr16_3073535_-_591aa MDDDSLDELVARSPGPDGHPQVGPADPAGDFEESSVGSSGDSGDDSDSEHGDGTDGEDEGASEEEDLEDRSGSEDSEDDGETLLEVAGTQ GKLEAAGSFNSDDDAESCPICLNAFRDQAVGTPENCAHYFCLDCIVEWSKNANSCPVDRTLFKCICIRAQFGGKILRKIPVENTKASEEE EDPTFCEVCGRSDREDRLLLCDGCDAGYHMECLDPPLQEVPVDEWFCPECAAPGVVLAADAGPVSEEEVSLLLADVVPTTSRLRPRAGRT RAIARTRQSERVRATVNRNRISTARRVQHTPGRLGSSLLDEAIEAVATGLSTAVYQRPLTPRTPARRKRKTRRRKKVPGRKKTPSGPSAK SKSSATRSKKRQHRVKKRRGKKVKSEATTRSRIARTLGLRRPVHSSCIPSVLKPVEPSLGLLRADIGAASLSLFGDPYELDPFDSEELSA NPLSPLSAKRRALSRSALQSHQPVARPVSVGLSSSPLRGAVPMSTKRRLEEEQEPLRKQFLSEENMATHFSQLSLHNDHPYCSPPMTFSP |
| * Fusion transcript sequences (only coding sequence (CDS) region). |
| >In-frame_PHRF1_ENST00000264555_chr11_605724_+_HCFC1R1_ENST00000248089_chr16_3073535_-_1776nt ATGGATGACGACAGCCTGGATGAGCTTGTGGCCCGGAGCCCAGGGCCGGATGGACACCCACAGGTCGGCCCTGCGGACCCGGCAGGTGAC TTTGAAGAAAGCAGCGTGGGCAGCAGTGGGGACTCTGGGGACGACAGTGACAGCGAGCATGGAGATGGCACAGACGGAGAAGACGAGGGG GCGTCTGAGGAGGAAGACCTGGAAGACAGATCTGGTTCCGAGGATTCTGAAGACGACGGGGAGACATTGCTGGAGGTAGCGGGTACTCAG GGGAAACTGGAAGCCGCTGGCTCTTTCAATTCTGATGATGATGCAGAGAGCTGCCCAATCTGTCTCAACGCATTCAGAGACCAGGCCGTG GGGACGCCGGAGAACTGTGCCCATTACTTCTGCCTGGACTGCATTGTCGAATGGTCCAAGAATGCCAATTCCTGTCCAGTTGATCGAACT CTATTTAAGTGCATTTGTATTCGAGCTCAATTTGGTGGTAAAATCTTAAGAAAGATCCCAGTGGAGAACACCAAAGCGAGCGAGGAGGAG GAGGACCCGACCTTCTGTGAGGTGTGCGGCAGGAGCGACCGTGAGGACAGGCTTTTGCTCTGCGACGGCTGCGATGCGGGGTACCACATG GAATGCTTGGACCCCCCTCTCCAGGAGGTGCCGGTGGACGAGTGGTTCTGCCCGGAATGTGCTGCGCCTGGTGTTGTCCTTGCCGCTGAT GCGGGTCCCGTGAGTGAGGAGGAGGTCTCCCTGCTCTTGGCTGATGTGGTGCCCACCACCAGCAGGCTTCGGCCTCGAGCAGGTAGGACC CGGGCGATAGCCAGGACACGGCAGAGTGAGAGAGTGAGAGCAACCGTGAACCGGAACCGGATCTCCACGGCCAGGAGGGTCCAGCACACA CCAGGGCGCCTCGGGTCTTCCCTGCTGGATGAAGCCATCGAGGCTGTGGCGACTGGCCTGAGCACTGCCGTGTATCAGCGCCCCCTGACG CCGCGCACTCCCGCCCGACGGAAGAGGAAGACAAGAAGACGGAAGAAAGTGCCGGGAAGAAAGAAAACCCCGTCCGGACCATCCGCAAAA AGTAAGAGCTCAGCGACAAGATCTAAGAAACGCCAACATCGAGTGAAGAAGAGAAGAGGGAAGAAGGTAAAGAGTGAAGCCACCACTCGC TCTCGAATCGCGCGGACGCTGGGCCTGCGCAGGCCTGTTCACAGCAGCTGCATCCCGTCAGTGTTGAAGCCAGTGGAGCCCTCTTTGGGG CTGCTGAGAGCGGATATTGGAGCTGCCTCTCTGTCTCTGTTTGGAGATCCTTATGAGCTGGATCCCTTCGACAGCAGTGAAGAGCTTTCT GCAAACCCTCTTTCCCCTCTGAGTGCCAAGAGACGGGCTCTGTCCCGGTCAGCCCTGCAGTCCCACCAGCCCGTGGCCAGGCCCGTCTCC GTGGGGCTTTCCAGCTCCCCTCTCCGAGGAGCTGTGCCCATGAGCACCAAGCGGCGCCTGGAGGAGGAGCAGGAGCCTCTGCGCAAGCAG TTTCTGTCTGAGGAGAACATGGCCACCCACTTCTCTCAACTCAGCCTGCACAATGACCACCCCTACTGCAGCCCCCCCATGACCTTCTCC CCAGCCCTGCCCCCACTCAGGAGCCCTTGCTCTGAGCTGCTTCTCTGGCGCTATCCTGGCAGCCTCATCCCTGAGGCCCTCCGTCTGCTG >In-frame_PHRF1_ENST00000413872_chr11_605724_+_HCFC1R1_ENST00000248089_chr16_3073535_-_1770nt ATGGATGACGACAGCCTGGATGAGCTTGTGGCCCGGAGCCCAGGGCCGGATGGACACCCACAGGTCGGCCCTGCGGACCCGGCAGGTGAC TTTGAAAGCAGCGTGGGCAGCAGTGGGGACTCTGGGGACGACAGTGACAGCGAGCATGGAGATGGCACAGACGGAGAAGACGAGGGGGCG TCTGAGGAGGAAGACCTGGAAGACAGATCTGGTTCCGAGGATTCTGAAGACGACGGGGAGACATTGCTGGAGGTAGCGGGTACTCAGGGG AAACTGGAAGCCGCTGGCTCTTTCAATTCTGATGATGATGCAGAGAGCTGCCCAATCTGTCTCAACGCATTCAGAGACCAGGCCGTGGGG ACGCCGGAGAACTGTGCCCATTACTTCTGCCTGGACTGCATTGTCGAATGGTCCAAGAATGCCAATTCCTGTCCAGTTGATCGAACTCTA TTTAAGTGCATTTGTATTCGAGCTCAATTTGGTGGTAAAATCTTAAGAAAGATCCCAGTGGAGAACACCAAAGCGAGCGAGGAGGAGGAG GACCCGACCTTCTGTGAGGTGTGCGGCAGGAGCGACCGTGAGGACAGGCTTTTGCTCTGCGACGGCTGCGATGCGGGGTACCACATGGAA TGCTTGGACCCCCCTCTCCAGGAGGTGCCGGTGGACGAGTGGTTCTGCCCGGAATGTGCTGCGCCTGGTGTTGTCCTTGCCGCTGATGCG GGTCCCGTGAGTGAGGAGGAGGTCTCCCTGCTCTTGGCTGATGTGGTGCCCACCACCAGCAGGCTTCGGCCTCGAGCAGGTAGGACCCGG GCGATAGCCAGGACACGGCAGAGTGAGAGAGTGAGAGCAACCGTGAACCGGAACCGGATCTCCACGGCCAGGAGGGTCCAGCACACACCA GGGCGCCTCGGGTCTTCCCTGCTGGATGAAGCCATCGAGGCTGTGGCGACTGGCCTGAGCACTGCCGTGTATCAGCGCCCCCTGACGCCG CGCACTCCCGCCCGACGGAAGAGGAAGACAAGAAGACGGAAGAAAGTGCCGGGAAGAAAGAAAACCCCGTCCGGACCATCCGCAAAAAGT AAGAGCTCAGCGACAAGATCTAAGAAACGCCAACATCGAGTGAAGAAGAGAAGAGGGAAGAAGGTAAAGAGTGAAGCCACCACTCGCTCT CGAATCGCGCGGACGCTGGGCCTGCGCAGGCCTGTTCACAGCAGCTGCATCCCGTCAGTGTTGAAGCCAGTGGAGCCCTCTTTGGGGCTG CTGAGAGCGGATATTGGAGCTGCCTCTCTGTCTCTGTTTGGAGATCCTTATGAGCTGGATCCCTTCGACAGTGAAGAGCTTTCTGCAAAC CCTCTTTCCCCTCTGAGTGCCAAGAGACGGGCTCTGTCCCGGTCAGCCCTGCAGTCCCACCAGCCCGTGGCCAGGCCCGTCTCCGTGGGG CTTTCCAGCTCCCCTCTCCGAGGAGCTGTGCCCATGAGCACCAAGCGGCGCCTGGAGGAGGAGCAGGAGCCTCTGCGCAAGCAGTTTCTG TCTGAGGAGAACATGGCCACCCACTTCTCTCAACTCAGCCTGCACAATGACCACCCCTACTGCAGCCCCCCCATGACCTTCTCCCCAGCC CTGCCCCCACTCAGGAGCCCTTGCTCTGAGCTGCTTCTCTGGCGCTATCCTGGCAGCCTCATCCCTGAGGCCCTCCGTCTGCTGAGGCTG >In-frame_PHRF1_ENST00000533464_chr11_605724_+_HCFC1R1_ENST00000248089_chr16_3073535_-_1764nt ATGGATGACGACAGCCTGGATGAGCTTGTGGCCCGGAGCCCAGGGCCGGATGGACACCCACAGGTCGGCCCTGCGGACCCGGCAGAAAGC AGCGTGGGCAGCAGTGGGGACTCTGGGGACGACAGTGACAGCGAGCATGGAGATGGCACAGACGGAGAAGACGAGGGGGCGTCTGAGGAG GAAGACCTGGAAGACAGATCTGGTTCCGAGGATTCTGAAGACGACGGGGAGACATTGCTGGAGGTAGCGGGTACTCAGGGGAAACTGGAA GCCGCTGGCTCTTTCAATTCTGATGATGATGCAGAGAGCTGCCCAATCTGTCTCAACGCATTCAGAGACCAGGCCGTGGGGACGCCGGAG AACTGTGCCCATTACTTCTGCCTGGACTGCATTGTCGAATGGTCCAAGAATGCCAATTCCTGTCCAGTTGATCGAACTCTATTTAAGTGC ATTTGTATTCGAGCTCAATTTGGTGGTAAAATCTTAAGAAAGATCCCAGTGGAGAACACCAAAGCGAGCGAGGAGGAGGAGGACCCGACC TTCTGTGAGGTGTGCGGCAGGAGCGACCGTGAGGACAGGCTTTTGCTCTGCGACGGCTGCGATGCGGGGTACCACATGGAATGCTTGGAC CCCCCTCTCCAGGAGGTGCCGGTGGACGAGTGGTTCTGCCCGGAATGTGCTGCGCCTGGTGTTGTCCTTGCCGCTGATGCGGGTCCCGTG AGTGAGGAGGAGGTCTCCCTGCTCTTGGCTGATGTGGTGCCCACCACCAGCAGGCTTCGGCCTCGAGCAGGTAGGACCCGGGCGATAGCC AGGACACGGCAGAGTGAGAGAGTGAGAGCAACCGTGAACCGGAACCGGATCTCCACGGCCAGGAGGGTCCAGCACACACCAGGGCGCCTC GGGTCTTCCCTGCTGGATGAAGCCATCGAGGCTGTGGCGACTGGCCTGAGCACTGCCGTGTATCAGCGCCCCCTGACGCCGCGCACTCCC GCCCGACGGAAGAGGAAGACAAGAAGACGGAAGAAAGTGCCGGGAAGAAAGAAAACCCCGTCCGGACCATCCGCAAAAAGTAAGAGCTCA GCGACAAGATCTAAGAAACGCCAACATCGAGTGAAGAAGAGAAGAGGGAAGAAGGTAAAGAGTGAAGCCACCACTCGCTCTCGAATCGCG CGGACGCTGGGCCTGCGCAGGCCTGTTCACAGCAGCTGCATCCCGTCAGTGTTGAAGCCAGTGGAGCCCTCTTTGGGGCTGCTGAGAGCG GATATTGGAGCTGCCTCTCTGTCTCTGTTTGGAGATCCTTATGAGCTGGATCCCTTCGACAGCAGTGAAGAGCTTTCTGCAAACCCTCTT TCCCCTCTGAGTGCCAAGAGACGGGCTCTGTCCCGGTCAGCCCTGCAGTCCCACCAGCCCGTGGCCAGGCCCGTCTCCGTGGGGCTTTCC AGCTCCCCTCTCCGAGGAGCTGTGCCCATGAGCACCAAGCGGCGCCTGGAGGAGGAGCAGGAGCCTCTGCGCAAGCAGTTTCTGTCTGAG GAGAACATGGCCACCCACTTCTCTCAACTCAGCCTGCACAATGACCACCCCTACTGCAGCCCCCCCATGACCTTCTCCCCAGCCCTGCCC CCACTCAGGAGCCCTTGCTCTGAGCTGCTTCTCTGGCGCTATCCTGGCAGCCTCATCCCTGAGGCCCTCCGTCTGCTGAGGCTGGGGGAC >In-frame_PHRF1_ENST00000416188_chr11_605724_+_HCFC1R1_ENST00000248089_chr16_3073535_-_1773nt ATGGATGACGACAGCCTGGATGAGCTTGTGGCCCGGAGCCCAGGGCCGGATGGACACCCACAGGTCGGCCCTGCGGACCCGGCAGGTGAC TTTGAAGAAAGCAGCGTGGGCAGCAGTGGGGACTCTGGGGACGACAGTGACAGCGAGCATGGAGATGGCACAGACGGAGAAGACGAGGGG GCGTCTGAGGAGGAAGACCTGGAAGACAGATCTGGTTCCGAGGATTCTGAAGACGACGGGGAGACATTGCTGGAGGTAGCGGGTACTCAG GGGAAACTGGAAGCCGCTGGCTCTTTCAATTCTGATGATGATGCAGAGAGCTGCCCAATCTGTCTCAACGCATTCAGAGACCAGGCCGTG GGGACGCCGGAGAACTGTGCCCATTACTTCTGCCTGGACTGCATTGTCGAATGGTCCAAGAATGCCAATTCCTGTCCAGTTGATCGAACT CTATTTAAGTGCATTTGTATTCGAGCTCAATTTGGTGGTAAAATCTTAAGAAAGATCCCAGTGGAGAACACCAAAGCGAGCGAGGAGGAG GAGGACCCGACCTTCTGTGAGGTGTGCGGCAGGAGCGACCGTGAGGACAGGCTTTTGCTCTGCGACGGCTGCGATGCGGGGTACCACATG GAATGCTTGGACCCCCCTCTCCAGGAGGTGCCGGTGGACGAGTGGTTCTGCCCGGAATGTGCTGCGCCTGGTGTTGTCCTTGCCGCTGAT GCGGGTCCCGTGAGTGAGGAGGAGGTCTCCCTGCTCTTGGCTGATGTGGTGCCCACCACCAGCAGGCTTCGGCCTCGAGCAGGTAGGACC CGGGCGATAGCCAGGACACGGCAGAGTGAGAGAGTGAGAGCAACCGTGAACCGGAACCGGATCTCCACGGCCAGGAGGGTCCAGCACACA CCAGGGCGCCTCGGGTCTTCCCTGCTGGATGAAGCCATCGAGGCTGTGGCGACTGGCCTGAGCACTGCCGTGTATCAGCGCCCCCTGACG CCGCGCACTCCCGCCCGACGGAAGAGGAAGACAAGAAGACGGAAGAAAGTGCCGGGAAGAAAGAAAACCCCGTCCGGACCATCCGCAAAA AGTAAGAGCTCAGCGACAAGATCTAAGAAACGCCAACATCGAGTGAAGAAGAGAAGAGGGAAGAAGGTAAAGAGTGAAGCCACCACTCGC TCTCGAATCGCGCGGACGCTGGGCCTGCGCAGGCCTGTTCACAGCAGCTGCATCCCGTCAGTGTTGAAGCCAGTGGAGCCCTCTTTGGGG CTGCTGAGAGCGGATATTGGAGCTGCCTCTCTGTCTCTGTTTGGAGATCCTTATGAGCTGGATCCCTTCGACAGTGAAGAGCTTTCTGCA AACCCTCTTTCCCCTCTGAGTGCCAAGAGACGGGCTCTGTCCCGGTCAGCCCTGCAGTCCCACCAGCCCGTGGCCAGGCCCGTCTCCGTG GGGCTTTCCAGCTCCCCTCTCCGAGGAGCTGTGCCCATGAGCACCAAGCGGCGCCTGGAGGAGGAGCAGGAGCCTCTGCGCAAGCAGTTT CTGTCTGAGGAGAACATGGCCACCCACTTCTCTCAACTCAGCCTGCACAATGACCACCCCTACTGCAGCCCCCCCATGACCTTCTCCCCA GCCCTGCCCCCACTCAGGAGCCCTTGCTCTGAGCTGCTTCTCTGGCGCTATCCTGGCAGCCTCATCCCTGAGGCCCTCCGTCTGCTGAGG |
| * Fusion transcript sequences (Full-length transcript). |
| >In-frame_PHRF1_ENST00000264555_chr11_605724_+_HCFC1R1_ENST00000248089_chr16_3073535_-_2147nt GAGCGCACGGCGGCGGCAGAGGCGGCGGCGGCCGGGCCTAGGAGCGACTCTCGGTCGTGCAGCGGCGGCGAGCGCTCGCGAGCGGCTGCG GGACGCGAGGTTTCCGGAGCTGAGCTCAATGTGCAGCAATGGATGACGACAGCCTGGATGAGCTTGTGGCCCGGAGCCCAGGGCCGGATG GACACCCACAGGTCGGCCCTGCGGACCCGGCAGGTGACTTTGAAGAAAGCAGCGTGGGCAGCAGTGGGGACTCTGGGGACGACAGTGACA GCGAGCATGGAGATGGCACAGACGGAGAAGACGAGGGGGCGTCTGAGGAGGAAGACCTGGAAGACAGATCTGGTTCCGAGGATTCTGAAG ACGACGGGGAGACATTGCTGGAGGTAGCGGGTACTCAGGGGAAACTGGAAGCCGCTGGCTCTTTCAATTCTGATGATGATGCAGAGAGCT GCCCAATCTGTCTCAACGCATTCAGAGACCAGGCCGTGGGGACGCCGGAGAACTGTGCCCATTACTTCTGCCTGGACTGCATTGTCGAAT GGTCCAAGAATGCCAATTCCTGTCCAGTTGATCGAACTCTATTTAAGTGCATTTGTATTCGAGCTCAATTTGGTGGTAAAATCTTAAGAA AGATCCCAGTGGAGAACACCAAAGCGAGCGAGGAGGAGGAGGACCCGACCTTCTGTGAGGTGTGCGGCAGGAGCGACCGTGAGGACAGGC TTTTGCTCTGCGACGGCTGCGATGCGGGGTACCACATGGAATGCTTGGACCCCCCTCTCCAGGAGGTGCCGGTGGACGAGTGGTTCTGCC CGGAATGTGCTGCGCCTGGTGTTGTCCTTGCCGCTGATGCGGGTCCCGTGAGTGAGGAGGAGGTCTCCCTGCTCTTGGCTGATGTGGTGC CCACCACCAGCAGGCTTCGGCCTCGAGCAGGTAGGACCCGGGCGATAGCCAGGACACGGCAGAGTGAGAGAGTGAGAGCAACCGTGAACC GGAACCGGATCTCCACGGCCAGGAGGGTCCAGCACACACCAGGGCGCCTCGGGTCTTCCCTGCTGGATGAAGCCATCGAGGCTGTGGCGA CTGGCCTGAGCACTGCCGTGTATCAGCGCCCCCTGACGCCGCGCACTCCCGCCCGACGGAAGAGGAAGACAAGAAGACGGAAGAAAGTGC CGGGAAGAAAGAAAACCCCGTCCGGACCATCCGCAAAAAGTAAGAGCTCAGCGACAAGATCTAAGAAACGCCAACATCGAGTGAAGAAGA GAAGAGGGAAGAAGGTAAAGAGTGAAGCCACCACTCGCTCTCGAATCGCGCGGACGCTGGGCCTGCGCAGGCCTGTTCACAGCAGCTGCA TCCCGTCAGTGTTGAAGCCAGTGGAGCCCTCTTTGGGGCTGCTGAGAGCGGATATTGGAGCTGCCTCTCTGTCTCTGTTTGGAGATCCTT ATGAGCTGGATCCCTTCGACAGCAGTGAAGAGCTTTCTGCAAACCCTCTTTCCCCTCTGAGTGCCAAGAGACGGGCTCTGTCCCGGTCAG CCCTGCAGTCCCACCAGCCCGTGGCCAGGCCCGTCTCCGTGGGGCTTTCCAGCTCCCCTCTCCGAGGAGCTGTGCCCATGAGCACCAAGC GGCGCCTGGAGGAGGAGCAGGAGCCTCTGCGCAAGCAGTTTCTGTCTGAGGAGAACATGGCCACCCACTTCTCTCAACTCAGCCTGCACA ATGACCACCCCTACTGCAGCCCCCCCATGACCTTCTCCCCAGCCCTGCCCCCACTCAGGAGCCCTTGCTCTGAGCTGCTTCTCTGGCGCT ATCCTGGCAGCCTCATCCCTGAGGCCCTCCGTCTGCTGAGGCTGGGGGACACCCCCAGTCCCCCCTACCCTGCAACCCCAGCTGGGGACA TAATGGAGCTCTGAGTGCTGGTGGACAGTGCCCCTCCCACCTTCCTTCTTCCCCACAACAGAAGAGACCAGCGACTCCCGCAAAGGGACA AGGTTCCTCCCTCTCCTGCAGAGTAGGCATCTGGGCACCAAGACCTTCCCTCAACAGAGGACACTGAGCCCAACGGAGTTCTGGGATGGG >In-frame_PHRF1_ENST00000413872_chr11_605724_+_HCFC1R1_ENST00000248089_chr16_3073535_-_2106nt GCCTAGGAGCGACTCTCGGTCGTGCAGCGGCGGCGAGCGCTCGCGAGCGGCTGCGGGACGCGAGGTTTCCGGAGCTGAGCTCAATGTGCA GCAATGGATGACGACAGCCTGGATGAGCTTGTGGCCCGGAGCCCAGGGCCGGATGGACACCCACAGGTCGGCCCTGCGGACCCGGCAGGT GACTTTGAAAGCAGCGTGGGCAGCAGTGGGGACTCTGGGGACGACAGTGACAGCGAGCATGGAGATGGCACAGACGGAGAAGACGAGGGG GCGTCTGAGGAGGAAGACCTGGAAGACAGATCTGGTTCCGAGGATTCTGAAGACGACGGGGAGACATTGCTGGAGGTAGCGGGTACTCAG GGGAAACTGGAAGCCGCTGGCTCTTTCAATTCTGATGATGATGCAGAGAGCTGCCCAATCTGTCTCAACGCATTCAGAGACCAGGCCGTG GGGACGCCGGAGAACTGTGCCCATTACTTCTGCCTGGACTGCATTGTCGAATGGTCCAAGAATGCCAATTCCTGTCCAGTTGATCGAACT CTATTTAAGTGCATTTGTATTCGAGCTCAATTTGGTGGTAAAATCTTAAGAAAGATCCCAGTGGAGAACACCAAAGCGAGCGAGGAGGAG GAGGACCCGACCTTCTGTGAGGTGTGCGGCAGGAGCGACCGTGAGGACAGGCTTTTGCTCTGCGACGGCTGCGATGCGGGGTACCACATG GAATGCTTGGACCCCCCTCTCCAGGAGGTGCCGGTGGACGAGTGGTTCTGCCCGGAATGTGCTGCGCCTGGTGTTGTCCTTGCCGCTGAT GCGGGTCCCGTGAGTGAGGAGGAGGTCTCCCTGCTCTTGGCTGATGTGGTGCCCACCACCAGCAGGCTTCGGCCTCGAGCAGGTAGGACC CGGGCGATAGCCAGGACACGGCAGAGTGAGAGAGTGAGAGCAACCGTGAACCGGAACCGGATCTCCACGGCCAGGAGGGTCCAGCACACA CCAGGGCGCCTCGGGTCTTCCCTGCTGGATGAAGCCATCGAGGCTGTGGCGACTGGCCTGAGCACTGCCGTGTATCAGCGCCCCCTGACG CCGCGCACTCCCGCCCGACGGAAGAGGAAGACAAGAAGACGGAAGAAAGTGCCGGGAAGAAAGAAAACCCCGTCCGGACCATCCGCAAAA AGTAAGAGCTCAGCGACAAGATCTAAGAAACGCCAACATCGAGTGAAGAAGAGAAGAGGGAAGAAGGTAAAGAGTGAAGCCACCACTCGC TCTCGAATCGCGCGGACGCTGGGCCTGCGCAGGCCTGTTCACAGCAGCTGCATCCCGTCAGTGTTGAAGCCAGTGGAGCCCTCTTTGGGG CTGCTGAGAGCGGATATTGGAGCTGCCTCTCTGTCTCTGTTTGGAGATCCTTATGAGCTGGATCCCTTCGACAGTGAAGAGCTTTCTGCA AACCCTCTTTCCCCTCTGAGTGCCAAGAGACGGGCTCTGTCCCGGTCAGCCCTGCAGTCCCACCAGCCCGTGGCCAGGCCCGTCTCCGTG GGGCTTTCCAGCTCCCCTCTCCGAGGAGCTGTGCCCATGAGCACCAAGCGGCGCCTGGAGGAGGAGCAGGAGCCTCTGCGCAAGCAGTTT CTGTCTGAGGAGAACATGGCCACCCACTTCTCTCAACTCAGCCTGCACAATGACCACCCCTACTGCAGCCCCCCCATGACCTTCTCCCCA GCCCTGCCCCCACTCAGGAGCCCTTGCTCTGAGCTGCTTCTCTGGCGCTATCCTGGCAGCCTCATCCCTGAGGCCCTCCGTCTGCTGAGG CTGGGGGACACCCCCAGTCCCCCCTACCCTGCAACCCCAGCTGGGGACATAATGGAGCTCTGAGTGCTGGTGGACAGTGCCCCTCCCACC TTCCTTCTTCCCCACAACAGAAGAGACCAGCGACTCCCGCAAAGGGACAAGGTTCCTCCCTCTCCTGCAGAGTAGGCATCTGGGCACCAA GACCTTCCCTCAACAGAGGACACTGAGCCCAACGGAGTTCTGGGATGGGAGGGGTGGGAGCATGGGAAGGGAGGCATCCCACCCCCAAGA >In-frame_PHRF1_ENST00000533464_chr11_605724_+_HCFC1R1_ENST00000248089_chr16_3073535_-_2100nt GCCTAGGAGCGACTCTCGGTCGTGCAGCGGCGGCGAGCGCTCGCGAGCGGCTGCGGGACGCGAGGTTTCCGGAGCTGAGCTCAATGTGCA GCAATGGATGACGACAGCCTGGATGAGCTTGTGGCCCGGAGCCCAGGGCCGGATGGACACCCACAGGTCGGCCCTGCGGACCCGGCAGAA AGCAGCGTGGGCAGCAGTGGGGACTCTGGGGACGACAGTGACAGCGAGCATGGAGATGGCACAGACGGAGAAGACGAGGGGGCGTCTGAG GAGGAAGACCTGGAAGACAGATCTGGTTCCGAGGATTCTGAAGACGACGGGGAGACATTGCTGGAGGTAGCGGGTACTCAGGGGAAACTG GAAGCCGCTGGCTCTTTCAATTCTGATGATGATGCAGAGAGCTGCCCAATCTGTCTCAACGCATTCAGAGACCAGGCCGTGGGGACGCCG GAGAACTGTGCCCATTACTTCTGCCTGGACTGCATTGTCGAATGGTCCAAGAATGCCAATTCCTGTCCAGTTGATCGAACTCTATTTAAG TGCATTTGTATTCGAGCTCAATTTGGTGGTAAAATCTTAAGAAAGATCCCAGTGGAGAACACCAAAGCGAGCGAGGAGGAGGAGGACCCG ACCTTCTGTGAGGTGTGCGGCAGGAGCGACCGTGAGGACAGGCTTTTGCTCTGCGACGGCTGCGATGCGGGGTACCACATGGAATGCTTG GACCCCCCTCTCCAGGAGGTGCCGGTGGACGAGTGGTTCTGCCCGGAATGTGCTGCGCCTGGTGTTGTCCTTGCCGCTGATGCGGGTCCC GTGAGTGAGGAGGAGGTCTCCCTGCTCTTGGCTGATGTGGTGCCCACCACCAGCAGGCTTCGGCCTCGAGCAGGTAGGACCCGGGCGATA GCCAGGACACGGCAGAGTGAGAGAGTGAGAGCAACCGTGAACCGGAACCGGATCTCCACGGCCAGGAGGGTCCAGCACACACCAGGGCGC CTCGGGTCTTCCCTGCTGGATGAAGCCATCGAGGCTGTGGCGACTGGCCTGAGCACTGCCGTGTATCAGCGCCCCCTGACGCCGCGCACT CCCGCCCGACGGAAGAGGAAGACAAGAAGACGGAAGAAAGTGCCGGGAAGAAAGAAAACCCCGTCCGGACCATCCGCAAAAAGTAAGAGC TCAGCGACAAGATCTAAGAAACGCCAACATCGAGTGAAGAAGAGAAGAGGGAAGAAGGTAAAGAGTGAAGCCACCACTCGCTCTCGAATC GCGCGGACGCTGGGCCTGCGCAGGCCTGTTCACAGCAGCTGCATCCCGTCAGTGTTGAAGCCAGTGGAGCCCTCTTTGGGGCTGCTGAGA GCGGATATTGGAGCTGCCTCTCTGTCTCTGTTTGGAGATCCTTATGAGCTGGATCCCTTCGACAGCAGTGAAGAGCTTTCTGCAAACCCT CTTTCCCCTCTGAGTGCCAAGAGACGGGCTCTGTCCCGGTCAGCCCTGCAGTCCCACCAGCCCGTGGCCAGGCCCGTCTCCGTGGGGCTT TCCAGCTCCCCTCTCCGAGGAGCTGTGCCCATGAGCACCAAGCGGCGCCTGGAGGAGGAGCAGGAGCCTCTGCGCAAGCAGTTTCTGTCT GAGGAGAACATGGCCACCCACTTCTCTCAACTCAGCCTGCACAATGACCACCCCTACTGCAGCCCCCCCATGACCTTCTCCCCAGCCCTG CCCCCACTCAGGAGCCCTTGCTCTGAGCTGCTTCTCTGGCGCTATCCTGGCAGCCTCATCCCTGAGGCCCTCCGTCTGCTGAGGCTGGGG GACACCCCCAGTCCCCCCTACCCTGCAACCCCAGCTGGGGACATAATGGAGCTCTGAGTGCTGGTGGACAGTGCCCCTCCCACCTTCCTT CTTCCCCACAACAGAAGAGACCAGCGACTCCCGCAAAGGGACAAGGTTCCTCCCTCTCCTGCAGAGTAGGCATCTGGGCACCAAGACCTT CCCTCAACAGAGGACACTGAGCCCAACGGAGTTCTGGGATGGGAGGGGTGGGAGCATGGGAAGGGAGGCATCCCACCCCCAAGAAGAACT >In-frame_PHRF1_ENST00000416188_chr11_605724_+_HCFC1R1_ENST00000248089_chr16_3073535_-_2109nt GCCTAGGAGCGACTCTCGGTCGTGCAGCGGCGGCGAGCGCTCGCGAGCGGCTGCGGGACGCGAGGTTTCCGGAGCTGAGCTCAATGTGCA GCAATGGATGACGACAGCCTGGATGAGCTTGTGGCCCGGAGCCCAGGGCCGGATGGACACCCACAGGTCGGCCCTGCGGACCCGGCAGGT GACTTTGAAGAAAGCAGCGTGGGCAGCAGTGGGGACTCTGGGGACGACAGTGACAGCGAGCATGGAGATGGCACAGACGGAGAAGACGAG GGGGCGTCTGAGGAGGAAGACCTGGAAGACAGATCTGGTTCCGAGGATTCTGAAGACGACGGGGAGACATTGCTGGAGGTAGCGGGTACT CAGGGGAAACTGGAAGCCGCTGGCTCTTTCAATTCTGATGATGATGCAGAGAGCTGCCCAATCTGTCTCAACGCATTCAGAGACCAGGCC GTGGGGACGCCGGAGAACTGTGCCCATTACTTCTGCCTGGACTGCATTGTCGAATGGTCCAAGAATGCCAATTCCTGTCCAGTTGATCGA ACTCTATTTAAGTGCATTTGTATTCGAGCTCAATTTGGTGGTAAAATCTTAAGAAAGATCCCAGTGGAGAACACCAAAGCGAGCGAGGAG GAGGAGGACCCGACCTTCTGTGAGGTGTGCGGCAGGAGCGACCGTGAGGACAGGCTTTTGCTCTGCGACGGCTGCGATGCGGGGTACCAC ATGGAATGCTTGGACCCCCCTCTCCAGGAGGTGCCGGTGGACGAGTGGTTCTGCCCGGAATGTGCTGCGCCTGGTGTTGTCCTTGCCGCT GATGCGGGTCCCGTGAGTGAGGAGGAGGTCTCCCTGCTCTTGGCTGATGTGGTGCCCACCACCAGCAGGCTTCGGCCTCGAGCAGGTAGG ACCCGGGCGATAGCCAGGACACGGCAGAGTGAGAGAGTGAGAGCAACCGTGAACCGGAACCGGATCTCCACGGCCAGGAGGGTCCAGCAC ACACCAGGGCGCCTCGGGTCTTCCCTGCTGGATGAAGCCATCGAGGCTGTGGCGACTGGCCTGAGCACTGCCGTGTATCAGCGCCCCCTG ACGCCGCGCACTCCCGCCCGACGGAAGAGGAAGACAAGAAGACGGAAGAAAGTGCCGGGAAGAAAGAAAACCCCGTCCGGACCATCCGCA AAAAGTAAGAGCTCAGCGACAAGATCTAAGAAACGCCAACATCGAGTGAAGAAGAGAAGAGGGAAGAAGGTAAAGAGTGAAGCCACCACT CGCTCTCGAATCGCGCGGACGCTGGGCCTGCGCAGGCCTGTTCACAGCAGCTGCATCCCGTCAGTGTTGAAGCCAGTGGAGCCCTCTTTG GGGCTGCTGAGAGCGGATATTGGAGCTGCCTCTCTGTCTCTGTTTGGAGATCCTTATGAGCTGGATCCCTTCGACAGTGAAGAGCTTTCT GCAAACCCTCTTTCCCCTCTGAGTGCCAAGAGACGGGCTCTGTCCCGGTCAGCCCTGCAGTCCCACCAGCCCGTGGCCAGGCCCGTCTCC GTGGGGCTTTCCAGCTCCCCTCTCCGAGGAGCTGTGCCCATGAGCACCAAGCGGCGCCTGGAGGAGGAGCAGGAGCCTCTGCGCAAGCAG TTTCTGTCTGAGGAGAACATGGCCACCCACTTCTCTCAACTCAGCCTGCACAATGACCACCCCTACTGCAGCCCCCCCATGACCTTCTCC CCAGCCCTGCCCCCACTCAGGAGCCCTTGCTCTGAGCTGCTTCTCTGGCGCTATCCTGGCAGCCTCATCCCTGAGGCCCTCCGTCTGCTG AGGCTGGGGGACACCCCCAGTCCCCCCTACCCTGCAACCCCAGCTGGGGACATAATGGAGCTCTGAGTGCTGGTGGACAGTGCCCCTCCC ACCTTCCTTCTTCCCCACAACAGAAGAGACCAGCGACTCCCGCAAAGGGACAAGGTTCCTCCCTCTCCTGCAGAGTAGGCATCTGGGCAC CAAGACCTTCCCTCAACAGAGGACACTGAGCCCAACGGAGTTCTGGGATGGGAGGGGTGGGAGCATGGGAAGGGAGGCATCCCACCCCCA |
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FusionGenePPI for PHRF1_HCFC1R1 |
| Go to ChiPPI (Chimeric Protein-Protein interactions) to see the chimeric PPI interaction in . |
| Protein-protein interactors with each fusion partner protein in wild-type (BIOGRID-3.4.160) |
| Hgene | Hgene's interactors | Tgene | Tgene's interactors |
| PHRF1 | JMJD6, SIRT7, COPS5, CSNK2B, AGPAT2, CSNK2A2, HIST3H3, NBN, XRCC6, XRCC5, EWSR1, CD44, KIF21A, NLRP3, DLST | HCFC1R1 | HCFC1, APP, OGT |
| - Retained PPIs in in-frame fusion. |
| Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Still interaction with |
| - Lost PPIs in in-frame fusion. |
| Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Interaction lost with |
| - Retained PPIs, but lost function due to frame-shift fusion. |
| Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Interaction lost with |
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RelatedDrugs for PHRF1_HCFC1R1 |
| Drugs targeting genes involved in this fusion gene. (DrugBank Version 5.1.0 2018-04-02) |
| Partner | Gene | UniProtAcc | DrugBank ID | Drug name | Drug activity | Drug type | Drug status |
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RelatedDiseases for PHRF1_HCFC1R1 |
| Diseases associated with fusion partners. (DisGeNet 4.0) |
| Partner | Gene | Disease ID | Disease name | # pubmeds | Source |
| Hgene | PHRF1 | C0024141 | Lupus Erythematosus, Systemic | 1 | CTD_human |
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