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Center for Computational Systems Medicine
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FusionGeneSummary

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FusionProtFeature

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FusionGeneSequence

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FusionGenePPI

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Fusion gene ID: 26958

FusionGeneSummary for PHF3_NUS1

check button Fusion gene summary
Fusion gene informationFusion gene name: PHF3_NUS1
Fusion gene ID: 26958
HgeneTgene
Gene symbol

PHF3

NUS1

Gene ID

23469

116150

Gene namePHD finger protein 3NUS1, dehydrodolichyl diphosphate synthase subunit
Synonyms-C6orf68|CDG1AA|MGC:7199|MRD55|NgBR|TANGO14
Cytomap

6q12

6q22.1

Type of geneprotein-codingprotein-coding
DescriptionPHD finger protein 3dehydrodolichyl diphosphate synthase complex subunit NUS1Nogo-B receptordehydrodolichyl diphosphate syntase complex subunit NUS1di-trans,poly-cis-decaprenylcistransferasenuclear undecaprenyl pyrophosphate synthase 1 homologtransport and golgi organiz
Modification date2018051920180522
UniProtAcc

Q92576

Q96E22

Ensembl transtripts involved in fusion geneENST00000262043, ENST00000509330, 
ENST00000393387, ENST00000420043, 
ENST00000368494, 
Fusion gene scores* DoF score11 X 5 X 7=3852 X 1 X 2=4
# samples 132
** MAII scorelog2(13/385*10)=-1.56634682255381
possibly effective Gene in Pan-Cancer Fusion Genes (peGinPCFGs).
DoF>8 and MAII<0
log2(2/4*10)=2.32192809488736
Context

PubMed: PHF3 [Title/Abstract] AND NUS1 [Title/Abstract] AND fusion [Title/Abstract]

Functional or gene categories assigned by FusionGDB annotation
* DoF score (Degree of Frequency) = # partners X # break points X # cancer types
** MAII score (Major Active Isofusion Index) = log2(# samples/DoF score*10)

check button Gene ontology of each fusion partner gene with evidence of Inferred from Direct Assay (IDA) from Entrez
PartnerGeneGO IDGO termPubMed ID

check button Fusion gene information from three resources
(ChiTars (NAR, 2018), tumorfusions (NAR, 2018), Gao et al. (Cell, 2018))
* All genome coordinats were lifted-over on hg19.
* Click on the break point to see the gene structure around the break point region using the UCSC Genome Browser.
Data typeSourceCancer typeSampleHgeneHchrHbpHstrandTgeneTchrTbpTstrand
TCGALDBRCATCGA-C8-A135-01APHF3chr6

64356700

+NUS1chr6

118014205

+
* LD: Li Ding group's fusion gene list
  RV: Roel Verhaak group's fusion gene list
  ChiTaRs fusion database

check button Open reading frame (ORF) analsis of fusion genes based on Ensembl gene isoform structure.
* Click on the break point to see the gene structure around the break point region using the UCSC Genome Browser.
ORFHenstTenstHgeneHchrHbpHstrandTgeneTchrTbpTstrand
In-frameENST00000262043ENST00000368494PHF3chr6

64356700

+NUS1chr6

118014205

+
In-frameENST00000509330ENST00000368494PHF3chr6

64356700

+NUS1chr6

118014205

+
In-frameENST00000393387ENST00000368494PHF3chr6

64356700

+NUS1chr6

118014205

+
intron-3CDSENST00000420043ENST00000368494PHF3chr6

64356700

+NUS1chr6

118014205

+

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FusionProtFeatures for PHF3_NUS1


check buttonMain function of each fusion partner protein. (from UniProt)
HgeneTgene
PHF3

Q92576

NUS1

Q96E22

With DHDDS, forms the dehydrodolichyl diphosphatesynthase (DDS) complex, an essential component of the dolicholmonophosphate (Dol-P) biosynthetic machinery. Adds multiple copiesof isopentenyl pyrophosphate (IPP) to farnesyl pyrophosphate (FPP)to produce dehydrodolichyl diphosphate (Dedol-PP), a precursor ofdolichol which is utilized as a sugar carrier in proteinglycosylation in the endoplasmic reticulum (ER). Regulates theglycosylation and stability of nascent NPC2, thereby promotingtrafficking of LDL-derived cholesterol. Acts as a specificreceptor for the N-terminus of Nogo-B, a neural and cardiovascularregulator. {ECO:0000269|PubMed:16835300,ECO:0000269|PubMed:21572394, ECO:0000269|PubMed:25066056}.

check buttonRetention analysis result of each fusion partner protein across 39 protein features of UniProt such as six molecule processing features, 13 region features, four site features, six amino acid modification features, two natural variation features, five experimental info features, and 3 secondary structure features. Here, because of limited space for viewing, we only show the protein feature retention information belong to the 13 regional features. All retention annotation result can be downloaded at

download page

.

* Minus value of BPloci means that the break pointn is located before the CDS.
- In-frame and retained protein feature among the 13 regional features.
PartnerGeneHbpTbpENSTStrandBPexonTotalExonProtein feature loci*BPlociTotalLenProtein featureProtein feature note

- In-frame and not-retained protein feature among the 13 regional features.
>>>>>>
PartnerGeneHbpTbpENSTStrandBPexonTotalExonProtein feature loci*BPlociTotalLenProtein featureProtein feature note
HgenePHF3chr6:64356700chr6:118014205ENST00000262043+2161797_1865812040Compositional biasNote=Pro-rich
HgenePHF3chr6:64356700chr6:118014205ENST00000393387+1151797_1865812040Compositional biasNote=Pro-rich
HgenePHF3chr6:64356700chr6:118014205ENST00000262043+216927_1046812040DomainTFIIS central
HgenePHF3chr6:64356700chr6:118014205ENST00000393387+115927_1046812040DomainTFIIS central
HgenePHF3chr6:64356700chr6:118014205ENST00000262043+216717_772812040Zinc fingerPHD-type
HgenePHF3chr6:64356700chr6:118014205ENST00000393387+115717_772812040Zinc fingerPHD-type
TgeneNUS1chr6:64356700chr6:118014205ENST00000368494+05117_135138294TransmembraneHelical%3B Name%3D3
TgeneNUS1chr6:64356700chr6:118014205ENST00000368494+051_23138294TransmembraneHelical%3B Name%3D1
TgeneNUS1chr6:64356700chr6:118014205ENST00000368494+0535_56138294TransmembraneHelical%3B Name%3D2


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FusionGeneSequence for PHF3_NUS1


check button For in-frame fusion transcripts, we provide the fusion transcript sequences and fusion amino acid sequences.
(nt: nucleotides, aa: amino acids)

* Fusion amino acid sequences.
>In-frame_PHF3_ENST00000262043_chr6_64356700_+_NUS1_ENST00000368494_chr6_118014205_+_237aa
MDIVDTFNHLIPTEHLDDALFLGSNLENEVCEDFSASQNVLEDSLKNMLSDKDPMLGSASNQFCLPVLDSNDPNFQMPCSTGIFKRNNSR
LMDEILKQQQELLGLDCSKYSPEFANSNDKDDQVLNCHLAVKVLSPEDGKADIVRAAQDFCQLVAQKQKRPTDLDVDTLASLLSSNGCPD

>In-frame_PHF3_ENST00000509330_chr6_64356700_+_NUS1_ENST00000368494_chr6_118014205_+_237aa
MDIVDTFNHLIPTEHLDDALFLGSNLENEVCEDFSASQNVLEDSLKNMLSDKDPMLGSASNQFCLPVLDSNDPNFQMPCSTGIFKRNNSR
LMDEILKQQQELLGLDCSKYSPEFANSNDKDDQVLNCHLAVKVLSPEDGKADIVRAAQDFCQLVAQKQKRPTDLDVDTLASLLSSNGCPD

>In-frame_PHF3_ENST00000393387_chr6_64356700_+_NUS1_ENST00000368494_chr6_118014205_+_237aa
MDIVDTFNHLIPTEHLDDALFLGSNLENEVCEDFSASQNVLEDSLKNMLSDKDPMLGSASNQFCLPVLDSNDPNFQMPCSTGIFKRNNSR
LMDEILKQQQELLGLDCSKYSPEFANSNDKDDQVLNCHLAVKVLSPEDGKADIVRAAQDFCQLVAQKQKRPTDLDVDTLASLLSSNGCPD


* Fusion transcript sequences (only coding sequence (CDS) region).
>In-frame_PHF3_ENST00000262043_chr6_64356700_+_NUS1_ENST00000368494_chr6_118014205_+_711nt
ATGGATATAGTTGATACATTTAATCATTTAATTCCTACTGAACACTTAGATGATGCCCTATTTCTAGGATCCAACCTGGAGAATGAAGTC
TGTGAGGATTTTAGTGCAAGTCAAAATGTCTTAGAGGACTCGCTGAAGAACATGCTCAGCGATAAGGATCCTATGCTAGGATCTGCAAGT
AACCAGTTCTGTTTGCCTGTTTTGGATAGCAATGATCCCAATTTCCAGATGCCTTGTTCAACAGGTATTTTCAAAAGAAATAATTCCAGA
TTGATGGATGAAATTTTAAAACAACAGCAAGAACTTCTGGGCCTAGATTGTTCAAAATACTCACCAGAATTTGCAAATAGTAATGACAAA
GATGATCAAGTTTTAAATTGCCATTTGGCAGTGAAGGTGCTGTCTCCGGAAGATGGAAAAGCAGATATTGTAAGAGCTGCTCAGGACTTT
TGCCAGTTAGTAGCCCAGAAGCAAAAGAGACCCACAGATTTGGATGTAGATACGTTAGCCAGTTTACTTAGTTCAAATGGTTGTCCTGAT
CCTGATTTAGTATTGAAGTTCGGTCCTGTGGACAGCACATTAGGCTTTCTTCCCTGGCACATCAGATTGACTGAGATTGTCTCTTTGCCT

>In-frame_PHF3_ENST00000509330_chr6_64356700_+_NUS1_ENST00000368494_chr6_118014205_+_711nt
ATGGATATAGTTGATACATTTAATCATTTAATTCCTACTGAACACTTAGATGATGCCCTATTTCTAGGATCCAACCTGGAGAATGAAGTC
TGTGAGGATTTTAGTGCAAGTCAAAATGTCTTAGAGGACTCGCTGAAGAACATGCTCAGCGATAAGGATCCTATGCTAGGATCTGCAAGT
AACCAGTTCTGTTTGCCTGTTTTGGATAGCAATGATCCCAATTTCCAGATGCCTTGTTCAACAGGTATTTTCAAAAGAAATAATTCCAGA
TTGATGGATGAAATTTTAAAACAACAGCAAGAACTTCTGGGCCTAGATTGTTCAAAATACTCACCAGAATTTGCAAATAGTAATGACAAA
GATGATCAAGTTTTAAATTGCCATTTGGCAGTGAAGGTGCTGTCTCCGGAAGATGGAAAAGCAGATATTGTAAGAGCTGCTCAGGACTTT
TGCCAGTTAGTAGCCCAGAAGCAAAAGAGACCCACAGATTTGGATGTAGATACGTTAGCCAGTTTACTTAGTTCAAATGGTTGTCCTGAT
CCTGATTTAGTATTGAAGTTCGGTCCTGTGGACAGCACATTAGGCTTTCTTCCCTGGCACATCAGATTGACTGAGATTGTCTCTTTGCCT

>In-frame_PHF3_ENST00000393387_chr6_64356700_+_NUS1_ENST00000368494_chr6_118014205_+_711nt
ATGGATATAGTTGATACATTTAATCATTTAATTCCTACTGAACACTTAGATGATGCCCTATTTCTAGGATCCAACCTGGAGAATGAAGTC
TGTGAGGATTTTAGTGCAAGTCAAAATGTCTTAGAGGACTCGCTGAAGAACATGCTCAGCGATAAGGATCCTATGCTAGGATCTGCAAGT
AACCAGTTCTGTTTGCCTGTTTTGGATAGCAATGATCCCAATTTCCAGATGCCTTGTTCAACAGGTATTTTCAAAAGAAATAATTCCAGA
TTGATGGATGAAATTTTAAAACAACAGCAAGAACTTCTGGGCCTAGATTGTTCAAAATACTCACCAGAATTTGCAAATAGTAATGACAAA
GATGATCAAGTTTTAAATTGCCATTTGGCAGTGAAGGTGCTGTCTCCGGAAGATGGAAAAGCAGATATTGTAAGAGCTGCTCAGGACTTT
TGCCAGTTAGTAGCCCAGAAGCAAAAGAGACCCACAGATTTGGATGTAGATACGTTAGCCAGTTTACTTAGTTCAAATGGTTGTCCTGAT
CCTGATTTAGTATTGAAGTTCGGTCCTGTGGACAGCACATTAGGCTTTCTTCCCTGGCACATCAGATTGACTGAGATTGTCTCTTTGCCT


* Fusion transcript sequences (Full-length transcript).
>In-frame_PHF3_ENST00000262043_chr6_64356700_+_NUS1_ENST00000368494_chr6_118014205_+_4676nt
CCGCGCCGCCGCCGCACGCCGATGGCTGCGGGGTCTCGCGCCGTCGCACCGTCCCCACGCGGCAAGCGACCTTCGGGCTCAGGGCGGCGG
CGGCTGCAACGAGGATTAGGAGGGCGGCGCGGAAGCCAAGAATAGTGTCGTCAGCAGCAGCCATTTGGTCCCAGGAGGAAAAGAGGCTGT
GGCAGCGACGCCGACGTCCTGCGCGTACCCCCTCTCCGCGGCACCCACCGGGCCCCCTCCTCCTCCTCTTCGGCGGCGGCAGCGTCCACC
ATCTTCCTCTTGCTGCCAGTGGTAGCGCTCGTCTGGCGGAGCTGGGGCTGAAAGACACACAGAAGTCTTCATGGATATAGTTGATACATT
TAATCATTTAATTCCTACTGAACACTTAGATGATGCCCTATTTCTAGGATCCAACCTGGAGAATGAAGTCTGTGAGGATTTTAGTGCAAG
TCAAAATGTCTTAGAGGACTCGCTGAAGAACATGCTCAGCGATAAGGATCCTATGCTAGGATCTGCAAGTAACCAGTTCTGTTTGCCTGT
TTTGGATAGCAATGATCCCAATTTCCAGATGCCTTGTTCAACAGGTATTTTCAAAAGAAATAATTCCAGATTGATGGATGAAATTTTAAA
ACAACAGCAAGAACTTCTGGGCCTAGATTGTTCAAAATACTCACCAGAATTTGCAAATAGTAATGACAAAGATGATCAAGTTTTAAATTG
CCATTTGGCAGTGAAGGTGCTGTCTCCGGAAGATGGAAAAGCAGATATTGTAAGAGCTGCTCAGGACTTTTGCCAGTTAGTAGCCCAGAA
GCAAAAGAGACCCACAGATTTGGATGTAGATACGTTAGCCAGTTTACTTAGTTCAAATGGTTGTCCTGATCCTGATTTAGTATTGAAGTT
CGGTCCTGTGGACAGCACATTAGGCTTTCTTCCCTGGCACATCAGATTGACTGAGATTGTCTCTTTGCCTTCCCACCTAAACATCAGTTA
TGAGGACTTTTTCTCTGCCCTTCGTCAATATGCAGCCTGTGAACAGCGTCTGGGAAAGTAGTGGTCATTGGTTGCATAATTTGATTTGAG
GCTTGTGGAGGAAAGGAACCAAGTGACTCTGATGTTTACAAAGCACCTATGAAACCCTGTACACACCTAGTTCATAATCCTCATAATTTA
TCAACAAACACAAAAAAGTGTCTTACTTGAGAGTGAGTGTGTGTGTGTGCGTGTGCACGTGCACACATGTGCACGTTTGTATGTATGGAA
ATAAACTTATAAATGGGGACGTATTGGAGAAGGAAATACATAGACCTACAACTTTGAGCAAATAGCAGTGATGTTTTAGGAACTGAAATG
TCACACTTAAAGTCTTCAGCCCAGCTACTTCCCTATTTTTGTGGGGAGAAGAGGGCCTGATTAGAACTGTTCTGGTTGTGTTTGGCGGGA
GGGGAATAATTTTTGTTCAGTCCTTCTTAGTGACCAAACTTTAATTTTTAAGAATAATATATTGACTTACTGAACTGAAGCATTCTGAGT
TGAAAGGAGCTCCAGAGGAGTGGAGTTCTGTGTTGCTCACATGTTAAAATCTTGCTCACCTTCAGAGCAGAGGGAATACCTATCTTCAGA
TATCCGTCCATTTTCATCTCTTAATTGTAGTCAAAAGTATGACTTGAGAGTGTTGCTCTGGTATTCTGGGTTCTGAAGTCTGGTATTCTG
GTATTCTGGGTTCAAAAGTATGACTTGAGAGTGTTGCTCTGGTATTCTGAGAGTTGCTCTGTATTCTGGGTTCTGAAGATTATTTGAAAA
ATAACTCCTACTACATTGAAATGCAGACTTAAAAATTTAAACATTGGATTAGGCAGTCAAAAAAACCAAGCAAGCATAAAAGGTCAATAA
GTTGTAATCTTGATAGTAAAGGTGGAAAACTTATTATAAATGGAAAGAAAGTTTTATTTCCTTTTTTGTTTGATGGGCAGTATGCCATAT
TATACCCAAAGTTCTTTTAAAAAATATTTCCATCAACCATTTTTATTTAAAATAAACATTTGAGGGAAGTTACCAAGGCAGCTTTTTTCC
TCAAAAGTAACCTGTTCCTCTTTGGAATAGCACATTTTAGGGGCATGGTTAATACCTGAGATTTTTACTCAGTAAATCCTGATGGTTACT
GTGTGTAAAATATCTTTAAGTAGGATTGAAGGCCTCTGTGGGGGAATAAAATATTACCAAAGTCTATAAAAATAAATTTTACATGTTCTC
TTTTATGACAGAGAGCAGCACTGGTTCTGTTATTTTTAAAATGAATAATTGATTTCTTGATAGGTGTTTAATATTTCTTCCCTCACTGCT
GATTCTTAGATAGAAACCATTCTTTATATTTGATAGACTGCTTTCAGAAAACCCTTATCAACAAGTGTACAATACTTATCTAAAACTATA
CATTTAGAATGGAGCAGTTTAATACTAGATCTCAGAAGTTTTGAAAAATAGCAAAGAAGACTGGATTTGGAAAGCATGGTCTACAATTGG
TTGTTAAATTCTGAAGCTATGAAGAATAAATGTTTCAACTTTGGATTATGAAACCCCATTTATGATTTTTTAAATACACTTGAAATAAAA
ATGATTAAACTAAATTTTGGTCCAGTGACATTACTTTGCACTGCATAATCCATTATACGTTGTACGACTTTTTTTTTTTGTTTTAATTTA
TTACTGAGAGTTTTGTGTGAAGCTACAGCATATCTAACCAGAGAATTTCTGATTCCTTATACTGTGATTATATTATATTGAGGCATTTGT
AGTGCAGCTGAAGACTGAATTTATGCCTTTTGTAAACATGATAGGTATAAATGTCTTATAAACATTCTGGAGTATGTATAGCTTTAATGA
ATGAAATTTAATGGACCTGATTAAAATGAAGGGATTTAATCGTTGTTAAAGTTAAGTTAGTCAAATAAATTACCTACTGGAATATAGCCC
AAGCCAGTAAAGGTTTAATATTTGCATTTTCGTGCTTTTATTTTCTCCTTCCATTCATAAGTATATACTTGAAAGTACATCTGTAGCCTA
TGATTTGAGTCTCTTGAAGTTCTAGGAAGAGGCAAACTACAAACTACTAGGATTCTGATTTCAGATGTAGTCATTCCAGAACCTTCTCTT
TATGAGTTCACCTGCTAGTACAATCTCCACAACTTGAATGGCATTGGTTGTTCTGTAATTCCTGCCAAAAGCATCACAAGTTGTACATCA
TCAAGGCTCCCTTTGCACTCCCAAGAAGAACTGGTAATTTTAAACAAAAGTATGTGTCTTTATTTGTATTGGAAAATACTGTCTTTAAAT
TGTTTCTTGTTGACACTCCCCACAATGGAAAAATTACCGAATTAAACCTGTTTTATGGATGGCAGCTTGGAGCATAGCAAGAAGTTGGAG
GATTTGAATTCCATTCCCAGTTCTCATTGTGTTTTGTTTCTTAAAACTATAATAATCGGTTACTGTTATAAAGTTTAAAAGGTGGTTTTA
ATGTGAATAGCAAATTCTGGTATATCGTGACTAACGCTTAAGAATGCCTGTCTTTGAGAGGAAGGTGTTATAATATTAATGAACAGTGCC
AAATACACTGTGCATATCTGCAATTTAATCTTTGAATGTATGTTACTGGATTAGCTCCCTCCTCCTGTGTGATGGTACCATGCATAGAGT
CAATCAAATCCTTGTGATGTTTTGTATGGACTTTGACAATATGTAAATAATGTGTAAAGCCAGTTTTTATGATTAAGGAATCAAATTTAT
TGAATTTTATTATTGAAAGTTGAAACTTAACATGTATGAACAAAAACCAATAAAAGAATATACTCTTTTCATTGACTATAGTATTATGTG
AATGCTACATTTGTTCTGAACACTTAGGGGCTGCAAAAATGTAATAAGAAATGCATATGACTAGATAGCAATAGTGTTTTTTTTAGATGG
TATGCTCTTGATTGAAATATATTCTCACTTTTACCAGGTTAAACATTTGGAATCTTATAATGTTACTTGCTTTTTGATAGATAATAGTGA
AATAAATTCAGCTTTGCCATTGCTGGAGTTGTCAAAATTCCACAGTAATTAAAATTTGAATTTTTACCGAATATGAAATTTCCAAATTAA
AAACGTATATGTGTACTCTTTTAAAAAGGAATTTGATAGTTCTTGTCAAATGAGAAAATTTAAAGGTAAGAGTTATGGTTTGTCTTATGC
TGCATAGACTATTCACCTCCTAACTTGAAGGTCTAATCATAAGACAATTGTTTTTTTGTGCATAGTTTTCATCTAAAATTAAGTTTACCA
AAGGCAAATAACTGCTTACTAGGAACTTCCTTTAGCAAAAATTACTATAAAGTTCAGGACAGTTTGAAATAAAACCCAGGAAACAAGATT
AATGTGAGCAGTTCTCCAAGATCCTAACTGGTGGGACATAAACTATGATGCAATGGATAGGAAAAGGTAGTGCAAAAAGAATTTCTTAAG
GTTTAAAAAATACACTTTTCATTATAGGAAAAAGAAGATTCAGAGAAACAAAGGAATGTAACCTTATTGATTACATTTTTGGTGATCACC

>In-frame_PHF3_ENST00000509330_chr6_64356700_+_NUS1_ENST00000368494_chr6_118014205_+_4703nt
GCTGAGGCGCGGGCGCGCAGGCCCGAGGCACGGCGGGCGCTGCCTGGAAGGCCCGTCTCGCAGGCCCCCGGATCCGGCCGTTGGGGCCTC
TTCCTTCTCAGGGAGCCCCAGCATGGAGCTTTGGGCCTTGGTTTCGGGAAACTGGGACTGGCCCTGGCTGCTAGGCTGCTCCCTGCTGCT
GCTTTTTGGAGATGAGAGTTGCTCTTCCATTTATCCTCCAGTTACCGCGCGCTTTTGTGCCCGGGACTCAAACTGTGGACTCCTTTTGCT
TAGTTTGAAATGAGAAGCCTAGACTCTTGCCTTCCGATAATACATGTAATTTAATGAACCACTTGTCGATACGGCTGAAAGACACACAGA
AGTCTTCATGGATATAGTTGATACATTTAATCATTTAATTCCTACTGAACACTTAGATGATGCCCTATTTCTAGGATCCAACCTGGAGAA
TGAAGTCTGTGAGGATTTTAGTGCAAGTCAAAATGTCTTAGAGGACTCGCTGAAGAACATGCTCAGCGATAAGGATCCTATGCTAGGATC
TGCAAGTAACCAGTTCTGTTTGCCTGTTTTGGATAGCAATGATCCCAATTTCCAGATGCCTTGTTCAACAGGTATTTTCAAAAGAAATAA
TTCCAGATTGATGGATGAAATTTTAAAACAACAGCAAGAACTTCTGGGCCTAGATTGTTCAAAATACTCACCAGAATTTGCAAATAGTAA
TGACAAAGATGATCAAGTTTTAAATTGCCATTTGGCAGTGAAGGTGCTGTCTCCGGAAGATGGAAAAGCAGATATTGTAAGAGCTGCTCA
GGACTTTTGCCAGTTAGTAGCCCAGAAGCAAAAGAGACCCACAGATTTGGATGTAGATACGTTAGCCAGTTTACTTAGTTCAAATGGTTG
TCCTGATCCTGATTTAGTATTGAAGTTCGGTCCTGTGGACAGCACATTAGGCTTTCTTCCCTGGCACATCAGATTGACTGAGATTGTCTC
TTTGCCTTCCCACCTAAACATCAGTTATGAGGACTTTTTCTCTGCCCTTCGTCAATATGCAGCCTGTGAACAGCGTCTGGGAAAGTAGTG
GTCATTGGTTGCATAATTTGATTTGAGGCTTGTGGAGGAAAGGAACCAAGTGACTCTGATGTTTACAAAGCACCTATGAAACCCTGTACA
CACCTAGTTCATAATCCTCATAATTTATCAACAAACACAAAAAAGTGTCTTACTTGAGAGTGAGTGTGTGTGTGTGCGTGTGCACGTGCA
CACATGTGCACGTTTGTATGTATGGAAATAAACTTATAAATGGGGACGTATTGGAGAAGGAAATACATAGACCTACAACTTTGAGCAAAT
AGCAGTGATGTTTTAGGAACTGAAATGTCACACTTAAAGTCTTCAGCCCAGCTACTTCCCTATTTTTGTGGGGAGAAGAGGGCCTGATTA
GAACTGTTCTGGTTGTGTTTGGCGGGAGGGGAATAATTTTTGTTCAGTCCTTCTTAGTGACCAAACTTTAATTTTTAAGAATAATATATT
GACTTACTGAACTGAAGCATTCTGAGTTGAAAGGAGCTCCAGAGGAGTGGAGTTCTGTGTTGCTCACATGTTAAAATCTTGCTCACCTTC
AGAGCAGAGGGAATACCTATCTTCAGATATCCGTCCATTTTCATCTCTTAATTGTAGTCAAAAGTATGACTTGAGAGTGTTGCTCTGGTA
TTCTGGGTTCTGAAGTCTGGTATTCTGGTATTCTGGGTTCAAAAGTATGACTTGAGAGTGTTGCTCTGGTATTCTGAGAGTTGCTCTGTA
TTCTGGGTTCTGAAGATTATTTGAAAAATAACTCCTACTACATTGAAATGCAGACTTAAAAATTTAAACATTGGATTAGGCAGTCAAAAA
AACCAAGCAAGCATAAAAGGTCAATAAGTTGTAATCTTGATAGTAAAGGTGGAAAACTTATTATAAATGGAAAGAAAGTTTTATTTCCTT
TTTTGTTTGATGGGCAGTATGCCATATTATACCCAAAGTTCTTTTAAAAAATATTTCCATCAACCATTTTTATTTAAAATAAACATTTGA
GGGAAGTTACCAAGGCAGCTTTTTTCCTCAAAAGTAACCTGTTCCTCTTTGGAATAGCACATTTTAGGGGCATGGTTAATACCTGAGATT
TTTACTCAGTAAATCCTGATGGTTACTGTGTGTAAAATATCTTTAAGTAGGATTGAAGGCCTCTGTGGGGGAATAAAATATTACCAAAGT
CTATAAAAATAAATTTTACATGTTCTCTTTTATGACAGAGAGCAGCACTGGTTCTGTTATTTTTAAAATGAATAATTGATTTCTTGATAG
GTGTTTAATATTTCTTCCCTCACTGCTGATTCTTAGATAGAAACCATTCTTTATATTTGATAGACTGCTTTCAGAAAACCCTTATCAACA
AGTGTACAATACTTATCTAAAACTATACATTTAGAATGGAGCAGTTTAATACTAGATCTCAGAAGTTTTGAAAAATAGCAAAGAAGACTG
GATTTGGAAAGCATGGTCTACAATTGGTTGTTAAATTCTGAAGCTATGAAGAATAAATGTTTCAACTTTGGATTATGAAACCCCATTTAT
GATTTTTTAAATACACTTGAAATAAAAATGATTAAACTAAATTTTGGTCCAGTGACATTACTTTGCACTGCATAATCCATTATACGTTGT
ACGACTTTTTTTTTTTGTTTTAATTTATTACTGAGAGTTTTGTGTGAAGCTACAGCATATCTAACCAGAGAATTTCTGATTCCTTATACT
GTGATTATATTATATTGAGGCATTTGTAGTGCAGCTGAAGACTGAATTTATGCCTTTTGTAAACATGATAGGTATAAATGTCTTATAAAC
ATTCTGGAGTATGTATAGCTTTAATGAATGAAATTTAATGGACCTGATTAAAATGAAGGGATTTAATCGTTGTTAAAGTTAAGTTAGTCA
AATAAATTACCTACTGGAATATAGCCCAAGCCAGTAAAGGTTTAATATTTGCATTTTCGTGCTTTTATTTTCTCCTTCCATTCATAAGTA
TATACTTGAAAGTACATCTGTAGCCTATGATTTGAGTCTCTTGAAGTTCTAGGAAGAGGCAAACTACAAACTACTAGGATTCTGATTTCA
GATGTAGTCATTCCAGAACCTTCTCTTTATGAGTTCACCTGCTAGTACAATCTCCACAACTTGAATGGCATTGGTTGTTCTGTAATTCCT
GCCAAAAGCATCACAAGTTGTACATCATCAAGGCTCCCTTTGCACTCCCAAGAAGAACTGGTAATTTTAAACAAAAGTATGTGTCTTTAT
TTGTATTGGAAAATACTGTCTTTAAATTGTTTCTTGTTGACACTCCCCACAATGGAAAAATTACCGAATTAAACCTGTTTTATGGATGGC
AGCTTGGAGCATAGCAAGAAGTTGGAGGATTTGAATTCCATTCCCAGTTCTCATTGTGTTTTGTTTCTTAAAACTATAATAATCGGTTAC
TGTTATAAAGTTTAAAAGGTGGTTTTAATGTGAATAGCAAATTCTGGTATATCGTGACTAACGCTTAAGAATGCCTGTCTTTGAGAGGAA
GGTGTTATAATATTAATGAACAGTGCCAAATACACTGTGCATATCTGCAATTTAATCTTTGAATGTATGTTACTGGATTAGCTCCCTCCT
CCTGTGTGATGGTACCATGCATAGAGTCAATCAAATCCTTGTGATGTTTTGTATGGACTTTGACAATATGTAAATAATGTGTAAAGCCAG
TTTTTATGATTAAGGAATCAAATTTATTGAATTTTATTATTGAAAGTTGAAACTTAACATGTATGAACAAAAACCAATAAAAGAATATAC
TCTTTTCATTGACTATAGTATTATGTGAATGCTACATTTGTTCTGAACACTTAGGGGCTGCAAAAATGTAATAAGAAATGCATATGACTA
GATAGCAATAGTGTTTTTTTTAGATGGTATGCTCTTGATTGAAATATATTCTCACTTTTACCAGGTTAAACATTTGGAATCTTATAATGT
TACTTGCTTTTTGATAGATAATAGTGAAATAAATTCAGCTTTGCCATTGCTGGAGTTGTCAAAATTCCACAGTAATTAAAATTTGAATTT
TTACCGAATATGAAATTTCCAAATTAAAAACGTATATGTGTACTCTTTTAAAAAGGAATTTGATAGTTCTTGTCAAATGAGAAAATTTAA
AGGTAAGAGTTATGGTTTGTCTTATGCTGCATAGACTATTCACCTCCTAACTTGAAGGTCTAATCATAAGACAATTGTTTTTTTGTGCAT
AGTTTTCATCTAAAATTAAGTTTACCAAAGGCAAATAACTGCTTACTAGGAACTTCCTTTAGCAAAAATTACTATAAAGTTCAGGACAGT
TTGAAATAAAACCCAGGAAACAAGATTAATGTGAGCAGTTCTCCAAGATCCTAACTGGTGGGACATAAACTATGATGCAATGGATAGGAA
AAGGTAGTGCAAAAAGAATTTCTTAAGGTTTAAAAAATACACTTTTCATTATAGGAAAAAGAAGATTCAGAGAAACAAAGGAATGTAACC
TTATTGATTACATTTTTGGTGATCACCGAGAATTTTTTGTACTATATTTTAAAAAATGTATTCTACTGTAACAAGTTAATAAAGAGATTT

>In-frame_PHF3_ENST00000393387_chr6_64356700_+_NUS1_ENST00000368494_chr6_118014205_+_4362nt
GGGCTGAAAGACACACAGAAGTCTTCATGGATATAGTTGATACATTTAATCATTTAATTCCTACTGAACACTTAGATGATGCCCTATTTC
TAGGATCCAACCTGGAGAATGAAGTCTGTGAGGATTTTAGTGCAAGTCAAAATGTCTTAGAGGACTCGCTGAAGAACATGCTCAGCGATA
AGGATCCTATGCTAGGATCTGCAAGTAACCAGTTCTGTTTGCCTGTTTTGGATAGCAATGATCCCAATTTCCAGATGCCTTGTTCAACAG
GTATTTTCAAAAGAAATAATTCCAGATTGATGGATGAAATTTTAAAACAACAGCAAGAACTTCTGGGCCTAGATTGTTCAAAATACTCAC
CAGAATTTGCAAATAGTAATGACAAAGATGATCAAGTTTTAAATTGCCATTTGGCAGTGAAGGTGCTGTCTCCGGAAGATGGAAAAGCAG
ATATTGTAAGAGCTGCTCAGGACTTTTGCCAGTTAGTAGCCCAGAAGCAAAAGAGACCCACAGATTTGGATGTAGATACGTTAGCCAGTT
TACTTAGTTCAAATGGTTGTCCTGATCCTGATTTAGTATTGAAGTTCGGTCCTGTGGACAGCACATTAGGCTTTCTTCCCTGGCACATCA
GATTGACTGAGATTGTCTCTTTGCCTTCCCACCTAAACATCAGTTATGAGGACTTTTTCTCTGCCCTTCGTCAATATGCAGCCTGTGAAC
AGCGTCTGGGAAAGTAGTGGTCATTGGTTGCATAATTTGATTTGAGGCTTGTGGAGGAAAGGAACCAAGTGACTCTGATGTTTACAAAGC
ACCTATGAAACCCTGTACACACCTAGTTCATAATCCTCATAATTTATCAACAAACACAAAAAAGTGTCTTACTTGAGAGTGAGTGTGTGT
GTGTGCGTGTGCACGTGCACACATGTGCACGTTTGTATGTATGGAAATAAACTTATAAATGGGGACGTATTGGAGAAGGAAATACATAGA
CCTACAACTTTGAGCAAATAGCAGTGATGTTTTAGGAACTGAAATGTCACACTTAAAGTCTTCAGCCCAGCTACTTCCCTATTTTTGTGG
GGAGAAGAGGGCCTGATTAGAACTGTTCTGGTTGTGTTTGGCGGGAGGGGAATAATTTTTGTTCAGTCCTTCTTAGTGACCAAACTTTAA
TTTTTAAGAATAATATATTGACTTACTGAACTGAAGCATTCTGAGTTGAAAGGAGCTCCAGAGGAGTGGAGTTCTGTGTTGCTCACATGT
TAAAATCTTGCTCACCTTCAGAGCAGAGGGAATACCTATCTTCAGATATCCGTCCATTTTCATCTCTTAATTGTAGTCAAAAGTATGACT
TGAGAGTGTTGCTCTGGTATTCTGGGTTCTGAAGTCTGGTATTCTGGTATTCTGGGTTCAAAAGTATGACTTGAGAGTGTTGCTCTGGTA
TTCTGAGAGTTGCTCTGTATTCTGGGTTCTGAAGATTATTTGAAAAATAACTCCTACTACATTGAAATGCAGACTTAAAAATTTAAACAT
TGGATTAGGCAGTCAAAAAAACCAAGCAAGCATAAAAGGTCAATAAGTTGTAATCTTGATAGTAAAGGTGGAAAACTTATTATAAATGGA
AAGAAAGTTTTATTTCCTTTTTTGTTTGATGGGCAGTATGCCATATTATACCCAAAGTTCTTTTAAAAAATATTTCCATCAACCATTTTT
ATTTAAAATAAACATTTGAGGGAAGTTACCAAGGCAGCTTTTTTCCTCAAAAGTAACCTGTTCCTCTTTGGAATAGCACATTTTAGGGGC
ATGGTTAATACCTGAGATTTTTACTCAGTAAATCCTGATGGTTACTGTGTGTAAAATATCTTTAAGTAGGATTGAAGGCCTCTGTGGGGG
AATAAAATATTACCAAAGTCTATAAAAATAAATTTTACATGTTCTCTTTTATGACAGAGAGCAGCACTGGTTCTGTTATTTTTAAAATGA
ATAATTGATTTCTTGATAGGTGTTTAATATTTCTTCCCTCACTGCTGATTCTTAGATAGAAACCATTCTTTATATTTGATAGACTGCTTT
CAGAAAACCCTTATCAACAAGTGTACAATACTTATCTAAAACTATACATTTAGAATGGAGCAGTTTAATACTAGATCTCAGAAGTTTTGA
AAAATAGCAAAGAAGACTGGATTTGGAAAGCATGGTCTACAATTGGTTGTTAAATTCTGAAGCTATGAAGAATAAATGTTTCAACTTTGG
ATTATGAAACCCCATTTATGATTTTTTAAATACACTTGAAATAAAAATGATTAAACTAAATTTTGGTCCAGTGACATTACTTTGCACTGC
ATAATCCATTATACGTTGTACGACTTTTTTTTTTTGTTTTAATTTATTACTGAGAGTTTTGTGTGAAGCTACAGCATATCTAACCAGAGA
ATTTCTGATTCCTTATACTGTGATTATATTATATTGAGGCATTTGTAGTGCAGCTGAAGACTGAATTTATGCCTTTTGTAAACATGATAG
GTATAAATGTCTTATAAACATTCTGGAGTATGTATAGCTTTAATGAATGAAATTTAATGGACCTGATTAAAATGAAGGGATTTAATCGTT
GTTAAAGTTAAGTTAGTCAAATAAATTACCTACTGGAATATAGCCCAAGCCAGTAAAGGTTTAATATTTGCATTTTCGTGCTTTTATTTT
CTCCTTCCATTCATAAGTATATACTTGAAAGTACATCTGTAGCCTATGATTTGAGTCTCTTGAAGTTCTAGGAAGAGGCAAACTACAAAC
TACTAGGATTCTGATTTCAGATGTAGTCATTCCAGAACCTTCTCTTTATGAGTTCACCTGCTAGTACAATCTCCACAACTTGAATGGCAT
TGGTTGTTCTGTAATTCCTGCCAAAAGCATCACAAGTTGTACATCATCAAGGCTCCCTTTGCACTCCCAAGAAGAACTGGTAATTTTAAA
CAAAAGTATGTGTCTTTATTTGTATTGGAAAATACTGTCTTTAAATTGTTTCTTGTTGACACTCCCCACAATGGAAAAATTACCGAATTA
AACCTGTTTTATGGATGGCAGCTTGGAGCATAGCAAGAAGTTGGAGGATTTGAATTCCATTCCCAGTTCTCATTGTGTTTTGTTTCTTAA
AACTATAATAATCGGTTACTGTTATAAAGTTTAAAAGGTGGTTTTAATGTGAATAGCAAATTCTGGTATATCGTGACTAACGCTTAAGAA
TGCCTGTCTTTGAGAGGAAGGTGTTATAATATTAATGAACAGTGCCAAATACACTGTGCATATCTGCAATTTAATCTTTGAATGTATGTT
ACTGGATTAGCTCCCTCCTCCTGTGTGATGGTACCATGCATAGAGTCAATCAAATCCTTGTGATGTTTTGTATGGACTTTGACAATATGT
AAATAATGTGTAAAGCCAGTTTTTATGATTAAGGAATCAAATTTATTGAATTTTATTATTGAAAGTTGAAACTTAACATGTATGAACAAA
AACCAATAAAAGAATATACTCTTTTCATTGACTATAGTATTATGTGAATGCTACATTTGTTCTGAACACTTAGGGGCTGCAAAAATGTAA
TAAGAAATGCATATGACTAGATAGCAATAGTGTTTTTTTTAGATGGTATGCTCTTGATTGAAATATATTCTCACTTTTACCAGGTTAAAC
ATTTGGAATCTTATAATGTTACTTGCTTTTTGATAGATAATAGTGAAATAAATTCAGCTTTGCCATTGCTGGAGTTGTCAAAATTCCACA
GTAATTAAAATTTGAATTTTTACCGAATATGAAATTTCCAAATTAAAAACGTATATGTGTACTCTTTTAAAAAGGAATTTGATAGTTCTT
GTCAAATGAGAAAATTTAAAGGTAAGAGTTATGGTTTGTCTTATGCTGCATAGACTATTCACCTCCTAACTTGAAGGTCTAATCATAAGA
CAATTGTTTTTTTGTGCATAGTTTTCATCTAAAATTAAGTTTACCAAAGGCAAATAACTGCTTACTAGGAACTTCCTTTAGCAAAAATTA
CTATAAAGTTCAGGACAGTTTGAAATAAAACCCAGGAAACAAGATTAATGTGAGCAGTTCTCCAAGATCCTAACTGGTGGGACATAAACT
ATGATGCAATGGATAGGAAAAGGTAGTGCAAAAAGAATTTCTTAAGGTTTAAAAAATACACTTTTCATTATAGGAAAAAGAAGATTCAGA
GAAACAAAGGAATGTAACCTTATTGATTACATTTTTGGTGATCACCGAGAATTTTTTGTACTATATTTTAAAAAATGTATTCTACTGTAA


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FusionGenePPI for PHF3_NUS1


check button Go to ChiPPI (Chimeric Protein-Protein interactions) to see the chimeric PPI interaction in

ChiPPI page

.

check button Protein-protein interactors with each fusion partner protein in wild-type (BIOGRID-3.4.160)
HgeneHgene's interactorsTgeneTgene's interactors
PHF3SIRT7, MAPK3, HECW2, BMI1, CLK1, ORC1, SUPT5H, YWHAZ, USP37, TMA16, ID2, TRIM25NUS1SPINT2, HLA-DPA1, DHDDS, TCTN2, TCTN3, POTEI, HSPA8, C5AR2, KCNC4, PCDHA3, ACTB, PCDHAC2, CHRNA9, EFNB2, ZNRF4, PTGER3, GPR114, LRRTM1, TMEM30B, HLA-C, APLNR


check button - Retained PPIs in in-frame fusion.
PartnerGeneHbpTbpENSTStrandBPexonTotalExonProtein feature loci*BPlociTotalLenStill interaction with


check button - Lost PPIs in in-frame fusion.
PartnerGeneHbpTbpENSTStrandBPexonTotalExonProtein feature loci*BPlociTotalLenInteraction lost with


check button - Retained PPIs, but lost function due to frame-shift fusion.
PartnerGeneHbpTbpENSTStrandBPexonTotalExonProtein feature loci*BPlociTotalLenInteraction lost with


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RelatedDrugs for PHF3_NUS1


check button Drugs targeting genes involved in this fusion gene.
(DrugBank Version 5.1.0 2018-04-02)
PartnerGeneUniProtAccDrugBank IDDrug nameDrug activityDrug typeDrug status

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RelatedDiseases for PHF3_NUS1


check button Diseases associated with fusion partners.
(DisGeNet 4.0)
PartnerGeneDisease IDDisease name# pubmedsSource
HgenePHF3C0001973Alcoholic Intoxication, Chronic2PSYGENET
TgeneNUS1C0025202melanoma1CTD_human