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Fusion gene ID: 26508 |
FusionGeneSummary for PDIA6_BANP |
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Fusion gene information | Fusion gene name: PDIA6_BANP | Fusion gene ID: 26508 | Hgene | Tgene | Gene symbol | PDIA6 | BANP | Gene ID | 10130 | 54971 |
Gene name | protein disulfide isomerase family A member 6 | BTG3 associated nuclear protein | |
Synonyms | ERP5|P5|TXNDC7 | BEND1|SMAR1|SMARBP1 | |
Cytomap | 2p25.1 | 16q24.2 | |
Type of gene | protein-coding | protein-coding | |
Description | protein disulfide-isomerase A6ER protein 5endoplasmic reticulum protein 5protein disulfide isomerase P5protein disulfide isomerase-associated 6protein disulfide isomerase-related proteinthioredoxin domain containing 7 (protein disulfide isomerase)t | protein BANPBEN domain-containing protein 1scaffold/matrix-associated region-1-binding protein | |
Modification date | 20180522 | 20180520 | |
UniProtAcc | Q15084 | Q8N9N5 | |
Ensembl transtripts involved in fusion gene | ENST00000272227, ENST00000404371, ENST00000404824, ENST00000540494, ENST00000381611, ENST00000489662, | ENST00000286122, ENST00000355163, ENST00000479780, ENST00000393208, ENST00000355022, ENST00000538234, ENST00000393207, ENST00000481948, | |
Fusion gene scores | * DoF score | 5 X 5 X 3=75 | 2 X 2 X 2=8 |
# samples | 5 | 2 | |
** MAII score | log2(5/75*10)=-0.584962500721156 possibly effective Gene in Pan-Cancer Fusion Genes (peGinPCFGs). DoF>8 and MAII<0 | log2(2/8*10)=1.32192809488736 | |
Context | PubMed: PDIA6 [Title/Abstract] AND BANP [Title/Abstract] AND fusion [Title/Abstract] | ||
Functional or gene categories assigned by FusionGDB annotation |
* DoF score (Degree of Frequency) = # partners X # break points X # cancer types ** MAII score (Major Active Isofusion Index) = log2(# samples/DoF score*10) |
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Partner | Gene | GO ID | GO term | PubMed ID |
![]() (ChiTars (NAR, 2018), tumorfusions (NAR, 2018), Gao et al. (Cell, 2018)) * All genome coordinats were lifted-over on hg19. * Click on the break point to see the gene structure around the break point region using the UCSC Genome Browser. |
Data type | Source | Cancer type | Sample | Hgene | Hchr | Hbp | Hstrand | Tgene | Tchr | Tbp | Tstrand |
ChiTaRS3.1 | BM852926 | PDIA6 | chr2 | 10929937 | - | BANP | chr16 | 87985724 | + |
* LD: Li Ding group's fusion gene list RV: Roel Verhaak group's fusion gene list ChiTaRs fusion database |
![]() * Click on the break point to see the gene structure around the break point region using the UCSC Genome Browser. |
ORF | Henst | Tenst | Hgene | Hchr | Hbp | Hstrand | Tgene | Tchr | Tbp | Tstrand |
intron-intron | ENST00000272227 | ENST00000286122 | PDIA6 | chr2 | 10929937 | - | BANP | chr16 | 87985724 | + |
intron-intron | ENST00000272227 | ENST00000355163 | PDIA6 | chr2 | 10929937 | - | BANP | chr16 | 87985724 | + |
intron-intron | ENST00000272227 | ENST00000479780 | PDIA6 | chr2 | 10929937 | - | BANP | chr16 | 87985724 | + |
intron-intron | ENST00000272227 | ENST00000393208 | PDIA6 | chr2 | 10929937 | - | BANP | chr16 | 87985724 | + |
intron-intron | ENST00000272227 | ENST00000355022 | PDIA6 | chr2 | 10929937 | - | BANP | chr16 | 87985724 | + |
intron-intron | ENST00000272227 | ENST00000538234 | PDIA6 | chr2 | 10929937 | - | BANP | chr16 | 87985724 | + |
intron-intron | ENST00000272227 | ENST00000393207 | PDIA6 | chr2 | 10929937 | - | BANP | chr16 | 87985724 | + |
intron-intron | ENST00000272227 | ENST00000481948 | PDIA6 | chr2 | 10929937 | - | BANP | chr16 | 87985724 | + |
intron-intron | ENST00000404371 | ENST00000286122 | PDIA6 | chr2 | 10929937 | - | BANP | chr16 | 87985724 | + |
intron-intron | ENST00000404371 | ENST00000355163 | PDIA6 | chr2 | 10929937 | - | BANP | chr16 | 87985724 | + |
intron-intron | ENST00000404371 | ENST00000479780 | PDIA6 | chr2 | 10929937 | - | BANP | chr16 | 87985724 | + |
intron-intron | ENST00000404371 | ENST00000393208 | PDIA6 | chr2 | 10929937 | - | BANP | chr16 | 87985724 | + |
intron-intron | ENST00000404371 | ENST00000355022 | PDIA6 | chr2 | 10929937 | - | BANP | chr16 | 87985724 | + |
intron-intron | ENST00000404371 | ENST00000538234 | PDIA6 | chr2 | 10929937 | - | BANP | chr16 | 87985724 | + |
intron-intron | ENST00000404371 | ENST00000393207 | PDIA6 | chr2 | 10929937 | - | BANP | chr16 | 87985724 | + |
intron-intron | ENST00000404371 | ENST00000481948 | PDIA6 | chr2 | 10929937 | - | BANP | chr16 | 87985724 | + |
intron-intron | ENST00000404824 | ENST00000286122 | PDIA6 | chr2 | 10929937 | - | BANP | chr16 | 87985724 | + |
intron-intron | ENST00000404824 | ENST00000355163 | PDIA6 | chr2 | 10929937 | - | BANP | chr16 | 87985724 | + |
intron-intron | ENST00000404824 | ENST00000479780 | PDIA6 | chr2 | 10929937 | - | BANP | chr16 | 87985724 | + |
intron-intron | ENST00000404824 | ENST00000393208 | PDIA6 | chr2 | 10929937 | - | BANP | chr16 | 87985724 | + |
intron-intron | ENST00000404824 | ENST00000355022 | PDIA6 | chr2 | 10929937 | - | BANP | chr16 | 87985724 | + |
intron-intron | ENST00000404824 | ENST00000538234 | PDIA6 | chr2 | 10929937 | - | BANP | chr16 | 87985724 | + |
intron-intron | ENST00000404824 | ENST00000393207 | PDIA6 | chr2 | 10929937 | - | BANP | chr16 | 87985724 | + |
intron-intron | ENST00000404824 | ENST00000481948 | PDIA6 | chr2 | 10929937 | - | BANP | chr16 | 87985724 | + |
intron-intron | ENST00000540494 | ENST00000286122 | PDIA6 | chr2 | 10929937 | - | BANP | chr16 | 87985724 | + |
intron-intron | ENST00000540494 | ENST00000355163 | PDIA6 | chr2 | 10929937 | - | BANP | chr16 | 87985724 | + |
intron-intron | ENST00000540494 | ENST00000479780 | PDIA6 | chr2 | 10929937 | - | BANP | chr16 | 87985724 | + |
intron-intron | ENST00000540494 | ENST00000393208 | PDIA6 | chr2 | 10929937 | - | BANP | chr16 | 87985724 | + |
intron-intron | ENST00000540494 | ENST00000355022 | PDIA6 | chr2 | 10929937 | - | BANP | chr16 | 87985724 | + |
intron-intron | ENST00000540494 | ENST00000538234 | PDIA6 | chr2 | 10929937 | - | BANP | chr16 | 87985724 | + |
intron-intron | ENST00000540494 | ENST00000393207 | PDIA6 | chr2 | 10929937 | - | BANP | chr16 | 87985724 | + |
intron-intron | ENST00000540494 | ENST00000481948 | PDIA6 | chr2 | 10929937 | - | BANP | chr16 | 87985724 | + |
intron-intron | ENST00000381611 | ENST00000286122 | PDIA6 | chr2 | 10929937 | - | BANP | chr16 | 87985724 | + |
intron-intron | ENST00000381611 | ENST00000355163 | PDIA6 | chr2 | 10929937 | - | BANP | chr16 | 87985724 | + |
intron-intron | ENST00000381611 | ENST00000479780 | PDIA6 | chr2 | 10929937 | - | BANP | chr16 | 87985724 | + |
intron-intron | ENST00000381611 | ENST00000393208 | PDIA6 | chr2 | 10929937 | - | BANP | chr16 | 87985724 | + |
intron-intron | ENST00000381611 | ENST00000355022 | PDIA6 | chr2 | 10929937 | - | BANP | chr16 | 87985724 | + |
intron-intron | ENST00000381611 | ENST00000538234 | PDIA6 | chr2 | 10929937 | - | BANP | chr16 | 87985724 | + |
intron-intron | ENST00000381611 | ENST00000393207 | PDIA6 | chr2 | 10929937 | - | BANP | chr16 | 87985724 | + |
intron-intron | ENST00000381611 | ENST00000481948 | PDIA6 | chr2 | 10929937 | - | BANP | chr16 | 87985724 | + |
intron-intron | ENST00000489662 | ENST00000286122 | PDIA6 | chr2 | 10929937 | - | BANP | chr16 | 87985724 | + |
intron-intron | ENST00000489662 | ENST00000355163 | PDIA6 | chr2 | 10929937 | - | BANP | chr16 | 87985724 | + |
intron-intron | ENST00000489662 | ENST00000479780 | PDIA6 | chr2 | 10929937 | - | BANP | chr16 | 87985724 | + |
intron-intron | ENST00000489662 | ENST00000393208 | PDIA6 | chr2 | 10929937 | - | BANP | chr16 | 87985724 | + |
intron-intron | ENST00000489662 | ENST00000355022 | PDIA6 | chr2 | 10929937 | - | BANP | chr16 | 87985724 | + |
intron-intron | ENST00000489662 | ENST00000538234 | PDIA6 | chr2 | 10929937 | - | BANP | chr16 | 87985724 | + |
intron-intron | ENST00000489662 | ENST00000393207 | PDIA6 | chr2 | 10929937 | - | BANP | chr16 | 87985724 | + |
intron-intron | ENST00000489662 | ENST00000481948 | PDIA6 | chr2 | 10929937 | - | BANP | chr16 | 87985724 | + |
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FusionProtFeatures for PDIA6_BANP |
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Hgene | Tgene |
PDIA6 | BANP |
Controls V(D)J recombination during T-cell developmentby repressing T-cell receptor (TCR) beta enhancer function. Bindsto scaffold/matrix attachment region beta (S/MARbeta), an ATC-richDNA sequence located upstream of the TCR beta enhancer. Repressescyclin D1 transcription by recruiting HDAC1 to its promoter,thereby diminishing H3K9ac, H3S10ph and H4K8ac levels. PromotesTP53 'Ser-15' phosphorylation and nuclear accumulation, whichcauses cell cycle arrest (By similarity). {ECO:0000250,ECO:0000269|PubMed:16166625}. |
![]() * Minus value of BPloci means that the break pointn is located before the CDS. |
- In-frame and retained protein feature among the 13 regional features. |
Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Protein feature | Protein feature note |
- In-frame and not-retained protein feature among the 13 regional features. |
Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Protein feature | Protein feature note |
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FusionGeneSequence for PDIA6_BANP |
![]() (nt: nucleotides, aa: amino acids) |
* Fusion amino acid sequences. |
* Fusion transcript sequences (only coding sequence (CDS) region). |
* Fusion transcript sequences (Full-length transcript). |
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FusionGenePPI for PDIA6_BANP |
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Hgene | Hgene's interactors | Tgene | Tgene's interactors |
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Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Still interaction with |
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Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Interaction lost with |
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Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Interaction lost with |
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RelatedDrugs for PDIA6_BANP |
![]() (DrugBank Version 5.1.0 2018-04-02) |
Partner | Gene | UniProtAcc | DrugBank ID | Drug name | Drug activity | Drug type | Drug status |
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RelatedDiseases for PDIA6_BANP |
![]() (DisGeNet 4.0) |
Partner | Gene | Disease ID | Disease name | # pubmeds | Source |