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Fusion gene ID: 26469 |
FusionGeneSummary for PDGFRL_VPS37A |
 Fusion gene summary |
| Fusion gene information | Fusion gene name: PDGFRL_VPS37A | Fusion gene ID: 26469 | Hgene | Tgene | Gene symbol | PDGFRL | VPS37A | Gene ID | 5157 | 137492 |
| Gene name | platelet derived growth factor receptor like | VPS37A, ESCRT-I subunit | |
| Synonyms | PDGRL|PRLTS | HCRP1|PQBP2|SPG53 | |
| Cytomap | 8p22 | 8p22 | |
| Type of gene | protein-coding | protein-coding | |
| Description | platelet-derived growth factor receptor-like proteinPDGF receptor beta-like tumor suppressorPDGFR-like proteinplatelet-derived growth factor-beta-like tumor suppressor | vacuolar protein sorting-associated protein 37AESCRT-I complex subunit VPS37Ahepatocellular carcinoma-related protein 1polyglutamine binding protein 2vacuolar protein sorting 37 homolog A | |
| Modification date | 20180329 | 20180522 | |
| UniProtAcc | Q15198 | Q8NEZ2 | |
| Ensembl transtripts involved in fusion gene | ENST00000541323, ENST00000251630, ENST00000398074, ENST00000523248, | ENST00000324849, ENST00000324815, ENST00000521829, ENST00000521005, ENST00000521162, | |
| Fusion gene scores | * DoF score | 2 X 2 X 2=8 | 4 X 4 X 3=48 |
| # samples | 2 | 4 | |
| ** MAII score | log2(2/8*10)=1.32192809488736 | log2(4/48*10)=-0.263034405833794 possibly effective Gene in Pan-Cancer Fusion Genes (peGinPCFGs). DoF>8 and MAII<0 | |
| Context | PubMed: PDGFRL [Title/Abstract] AND VPS37A [Title/Abstract] AND fusion [Title/Abstract] | ||
| Functional or gene categories assigned by FusionGDB annotation | Tumor suppressor gene involved fusion gene, in-frame but not retained their domain. | ||
| * DoF score (Degree of Frequency) = # partners X # break points X # cancer types ** MAII score (Major Active Isofusion Index) = log2(# samples/DoF score*10) |
| Gene ontology of each fusion partner gene with evidence of Inferred from Direct Assay (IDA) from Entrez |
| Partner | Gene | GO ID | GO term | PubMed ID |
| Fusion gene information from three resources (ChiTars (NAR, 2018), tumorfusions (NAR, 2018), Gao et al. (Cell, 2018)) * All genome coordinats were lifted-over on hg19. * Click on the break point to see the gene structure around the break point region using the UCSC Genome Browser. |
| Data type | Source | Cancer type | Sample | Hgene | Hchr | Hbp | Hstrand | Tgene | Tchr | Tbp | Tstrand |
| TCGA | RV | LUAD | TCGA-91-A4BC-01A | PDGFRL | chr8 | 17447274 | + | VPS37A | chr8 | 17132242 | + |
| * LD: Li Ding group's fusion gene list RV: Roel Verhaak group's fusion gene list ChiTaRs fusion database |
| Open reading frame (ORF) analsis of fusion genes based on Ensembl gene isoform structure. * Click on the break point to see the gene structure around the break point region using the UCSC Genome Browser. |
| ORF | Henst | Tenst | Hgene | Hchr | Hbp | Hstrand | Tgene | Tchr | Tbp | Tstrand |
| In-frame | ENST00000541323 | ENST00000324849 | PDGFRL | chr8 | 17447274 | + | VPS37A | chr8 | 17132242 | + |
| 5CDS-intron | ENST00000541323 | ENST00000324815 | PDGFRL | chr8 | 17447274 | + | VPS37A | chr8 | 17132242 | + |
| 5CDS-intron | ENST00000541323 | ENST00000521829 | PDGFRL | chr8 | 17447274 | + | VPS37A | chr8 | 17132242 | + |
| 5CDS-intron | ENST00000541323 | ENST00000521005 | PDGFRL | chr8 | 17447274 | + | VPS37A | chr8 | 17132242 | + |
| 5CDS-intron | ENST00000541323 | ENST00000521162 | PDGFRL | chr8 | 17447274 | + | VPS37A | chr8 | 17132242 | + |
| In-frame | ENST00000251630 | ENST00000324849 | PDGFRL | chr8 | 17447274 | + | VPS37A | chr8 | 17132242 | + |
| 5CDS-intron | ENST00000251630 | ENST00000324815 | PDGFRL | chr8 | 17447274 | + | VPS37A | chr8 | 17132242 | + |
| 5CDS-intron | ENST00000251630 | ENST00000521829 | PDGFRL | chr8 | 17447274 | + | VPS37A | chr8 | 17132242 | + |
| 5CDS-intron | ENST00000251630 | ENST00000521005 | PDGFRL | chr8 | 17447274 | + | VPS37A | chr8 | 17132242 | + |
| 5CDS-intron | ENST00000251630 | ENST00000521162 | PDGFRL | chr8 | 17447274 | + | VPS37A | chr8 | 17132242 | + |
| In-frame | ENST00000398074 | ENST00000324849 | PDGFRL | chr8 | 17447274 | + | VPS37A | chr8 | 17132242 | + |
| 5CDS-intron | ENST00000398074 | ENST00000324815 | PDGFRL | chr8 | 17447274 | + | VPS37A | chr8 | 17132242 | + |
| 5CDS-intron | ENST00000398074 | ENST00000521829 | PDGFRL | chr8 | 17447274 | + | VPS37A | chr8 | 17132242 | + |
| 5CDS-intron | ENST00000398074 | ENST00000521005 | PDGFRL | chr8 | 17447274 | + | VPS37A | chr8 | 17132242 | + |
| 5CDS-intron | ENST00000398074 | ENST00000521162 | PDGFRL | chr8 | 17447274 | + | VPS37A | chr8 | 17132242 | + |
| intron-3CDS | ENST00000523248 | ENST00000324849 | PDGFRL | chr8 | 17447274 | + | VPS37A | chr8 | 17132242 | + |
| intron-intron | ENST00000523248 | ENST00000324815 | PDGFRL | chr8 | 17447274 | + | VPS37A | chr8 | 17132242 | + |
| intron-intron | ENST00000523248 | ENST00000521829 | PDGFRL | chr8 | 17447274 | + | VPS37A | chr8 | 17132242 | + |
| intron-intron | ENST00000523248 | ENST00000521005 | PDGFRL | chr8 | 17447274 | + | VPS37A | chr8 | 17132242 | + |
| intron-intron | ENST00000523248 | ENST00000521162 | PDGFRL | chr8 | 17447274 | + | VPS37A | chr8 | 17132242 | + |
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FusionProtFeatures for PDGFRL_VPS37A |
| Main function of each fusion partner protein. (from UniProt) |
| Hgene | Tgene |
| PDGFRL | VPS37A |
| Component of the ESCRT-I complex, a regulator ofvesicular trafficking process. Required for the sorting ofendocytic ubiquitinated cargos into multivesicular bodies. May beinvolved in cell growth and differentiation.{ECO:0000269|PubMed:15240819}. |
| Retention analysis result of each fusion partner protein across 39 protein features of UniProt such as six molecule processing features, 13 region features, four site features, six amino acid modification features, two natural variation features, five experimental info features, and 3 secondary structure features. Here, because of limited space for viewing, we only show the protein feature retention information belong to the 13 regional features. All retention annotation result can be downloaded at . * Minus value of BPloci means that the break pointn is located before the CDS. |
| - In-frame and retained protein feature among the 13 regional features. |
| Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Protein feature | Protein feature note |
| Tgene | >VPS37A | chr8:17447274 | chr8:17132242 | ENST00000324815 | + | 0 | 6 | 308_397 | -118 | 186 | Domain | VPS37 C-terminal |
| Tgene | >VPS37A | chr8:17447274 | chr8:17132242 | ENST00000324849 | + | 3 | 12 | 308_397 | 138 | 1144 | Domain | VPS37 C-terminal |
| Tgene | >VPS37A | chr8:17447274 | chr8:17132242 | ENST00000521829 | + | 2 | 11 | 308_397 | 113 | 312 | Domain | VPS37 C-terminal |
| - In-frame and not-retained protein feature among the 13 regional features. |
| Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Protein feature | Protein feature note |
| Hgene | >PDGFRL | chr8:17447274 | chr8:17132242 | ENST00000251630 | + | 3 | 7 | 272_375 | 117 | 376 | Domain | Note=Ig-like C2-type 2 |
| Hgene | >PDGFRL | chr8:17447274 | chr8:17132242 | ENST00000251630 | + | 3 | 7 | 62_159 | 117 | 376 | Domain | Note=Ig-like C2-type 1 |
| Hgene | >PDGFRL | chr8:17447274 | chr8:17132242 | ENST00000398074 | + | 2 | 6 | 272_375 | 117 | 376 | Domain | Note=Ig-like C2-type 2 |
| Hgene | >PDGFRL | chr8:17447274 | chr8:17132242 | ENST00000398074 | + | 2 | 6 | 62_159 | 117 | 376 | Domain | Note=Ig-like C2-type 1 |
| Hgene | >PDGFRL | chr8:17447274 | chr8:17132242 | ENST00000541323 | + | 3 | 7 | 272_375 | 117 | 376 | Domain | Note=Ig-like C2-type 2 |
| Hgene | >PDGFRL | chr8:17447274 | chr8:17132242 | ENST00000541323 | + | 3 | 7 | 62_159 | 117 | 376 | Domain | Note=Ig-like C2-type 1 |
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FusionGeneSequence for PDGFRL_VPS37A |
| For in-frame fusion transcripts, we provide the fusion transcript sequences and fusion amino acid sequences. (nt: nucleotides, aa: amino acids) |
| * Fusion amino acid sequences. |
| >In-frame_PDGFRL_ENST00000541323_chr8_17447274_+_VPS37A_ENST00000324849_chr8_17132242_+_377aa MKVWLLLGLLLVHEALEDVTGQHLPKNKRPKEPGENRIKPTNKKVKPKIPKMKDRDSANSAPKTQSIMMQVLDKGRFQKPAATLSLLAGQ TVELRCKGSRIGWSYPATLDTFKDSRLSLYSNPSGMSPTASQGFPFLPPTPPQEANRSITSLSVADTVSSSTTSHTTAKPAAPSFGVLSN LPLPIPTVDASIPTSQNGFGYKMPDVPDAFPELSELSVSQLTDMNEQEEVLLEQFLTLPQLKQIITDKDDLVKSIEELARKNLLLEPSLE AKRQTVLDKTELLTQMKSTFEKKMQRQHELSESCSASALQARLKVAAHEAEEESDNIAEDFLEGKMEIDDFLSSFMEKRTICHCRRAKEE >In-frame_PDGFRL_ENST00000251630_chr8_17447274_+_VPS37A_ENST00000324849_chr8_17132242_+_377aa MKVWLLLGLLLVHEALEDVTGQHLPKNKRPKEPGENRIKPTNKKVKPKIPKMKDRDSANSAPKTQSIMMQVLDKGRFQKPAATLSLLAGQ TVELRCKGSRIGWSYPATLDTFKDSRLSLYSNPSGMSPTASQGFPFLPPTPPQEANRSITSLSVADTVSSSTTSHTTAKPAAPSFGVLSN LPLPIPTVDASIPTSQNGFGYKMPDVPDAFPELSELSVSQLTDMNEQEEVLLEQFLTLPQLKQIITDKDDLVKSIEELARKNLLLEPSLE AKRQTVLDKTELLTQMKSTFEKKMQRQHELSESCSASALQARLKVAAHEAEEESDNIAEDFLEGKMEIDDFLSSFMEKRTICHCRRAKEE >In-frame_PDGFRL_ENST00000398074_chr8_17447274_+_VPS37A_ENST00000324849_chr8_17132242_+_377aa MKVWLLLGLLLVHEALEDVTGQHLPKNKRPKEPGENRIKPTNKKVKPKIPKMKDRDSANSAPKTQSIMMQVLDKGRFQKPAATLSLLAGQ TVELRCKGSRIGWSYPATLDTFKDSRLSLYSNPSGMSPTASQGFPFLPPTPPQEANRSITSLSVADTVSSSTTSHTTAKPAAPSFGVLSN LPLPIPTVDASIPTSQNGFGYKMPDVPDAFPELSELSVSQLTDMNEQEEVLLEQFLTLPQLKQIITDKDDLVKSIEELARKNLLLEPSLE AKRQTVLDKTELLTQMKSTFEKKMQRQHELSESCSASALQARLKVAAHEAEEESDNIAEDFLEGKMEIDDFLSSFMEKRTICHCRRAKEE |
| * Fusion transcript sequences (only coding sequence (CDS) region). |
| >In-frame_PDGFRL_ENST00000541323_chr8_17447274_+_VPS37A_ENST00000324849_chr8_17132242_+_1131nt ATGAAGGTCTGGCTGCTGCTTGGTCTTCTGCTGGTGCACGAAGCGCTGGAGGATGTTACTGGCCAACACCTTCCCAAGAACAAGCGTCCA AAAGAACCAGGAGAGAATAGAATCAAACCTACCAACAAGAAGGTGAAGCCCAAAATTCCTAAAATGAAGGACAGGGACTCAGCCAATTCA GCACCAAAGACGCAGTCTATCATGATGCAAGTGCTGGATAAAGGTCGCTTCCAGAAACCCGCCGCTACCCTGAGTCTGCTGGCGGGGCAA ACTGTAGAGCTTCGATGTAAAGGGAGTAGAATTGGGTGGAGCTACCCTGCGTATCTGGACACCTTTAAGGATTCTCGCCTCAGTCTATAC AGTAACCCAAGTGGGATGTCTCCTTATGCTTCTCAGGGTTTTCCATTTCTTCCTCCATATCCTCCACAAGAAGCAAACAGGAGTATCACT TCTTTATCTGTTGCTGACACTGTTTCTTCTTCAACAACAAGTCATACCACAGCCAAGCCTGCCGCTCCTTCATTTGGTGTCCTTTCAAAT CTGCCATTACCCATTCCCACAGTGGATGCTTCAATACCGACAAGCCAAAATGGTTTTGGGTACAAGATGCCAGATGTCCCTGATGCATTT CCAGAACTCTCAGAACTAAGTGTGTCACAACTCACAGATATGAATGAACAAGAGGAGGTATTACTAGAACAGTTTCTGACTTTGCCTCAA CTAAAACAAATTATTACCGACAAAGATGACTTAGTAAAAAGTATTGAGGAACTAGCAAGAAAAAATCTCCTTTTGGAGCCCAGCTTGGAA GCCAAAAGACAAACTGTTTTAGATAAGTATGAATTACTTACACAGATGAAGTCCACTTTCGAAAAGAAGATGCAAAGGCAGCATGAACTT AGTGAGAGCTGTAGTGCAAGTGCCCTTCAGGCAAGATTGAAAGTAGCTGCACATGAAGCTGAGGAAGAATCTGATAATATTGCAGAAGAC TTCTTGGAGGGAAAGATGGAAATAGATGATTTTCTCAGTAGCTTCATGGAAAAGAGAACAATTTGCCACTGTAGAAGAGCCAAGGAAGAG >In-frame_PDGFRL_ENST00000251630_chr8_17447274_+_VPS37A_ENST00000324849_chr8_17132242_+_1131nt ATGAAGGTCTGGCTGCTGCTTGGTCTTCTGCTGGTGCACGAAGCGCTGGAGGATGTTACTGGCCAACACCTTCCCAAGAACAAGCGTCCA AAAGAACCAGGAGAGAATAGAATCAAACCTACCAACAAGAAGGTGAAGCCCAAAATTCCTAAAATGAAGGACAGGGACTCAGCCAATTCA GCACCAAAGACGCAGTCTATCATGATGCAAGTGCTGGATAAAGGTCGCTTCCAGAAACCCGCCGCTACCCTGAGTCTGCTGGCGGGGCAA ACTGTAGAGCTTCGATGTAAAGGGAGTAGAATTGGGTGGAGCTACCCTGCGTATCTGGACACCTTTAAGGATTCTCGCCTCAGTCTATAC AGTAACCCAAGTGGGATGTCTCCTTATGCTTCTCAGGGTTTTCCATTTCTTCCTCCATATCCTCCACAAGAAGCAAACAGGAGTATCACT TCTTTATCTGTTGCTGACACTGTTTCTTCTTCAACAACAAGTCATACCACAGCCAAGCCTGCCGCTCCTTCATTTGGTGTCCTTTCAAAT CTGCCATTACCCATTCCCACAGTGGATGCTTCAATACCGACAAGCCAAAATGGTTTTGGGTACAAGATGCCAGATGTCCCTGATGCATTT CCAGAACTCTCAGAACTAAGTGTGTCACAACTCACAGATATGAATGAACAAGAGGAGGTATTACTAGAACAGTTTCTGACTTTGCCTCAA CTAAAACAAATTATTACCGACAAAGATGACTTAGTAAAAAGTATTGAGGAACTAGCAAGAAAAAATCTCCTTTTGGAGCCCAGCTTGGAA GCCAAAAGACAAACTGTTTTAGATAAGTATGAATTACTTACACAGATGAAGTCCACTTTCGAAAAGAAGATGCAAAGGCAGCATGAACTT AGTGAGAGCTGTAGTGCAAGTGCCCTTCAGGCAAGATTGAAAGTAGCTGCACATGAAGCTGAGGAAGAATCTGATAATATTGCAGAAGAC TTCTTGGAGGGAAAGATGGAAATAGATGATTTTCTCAGTAGCTTCATGGAAAAGAGAACAATTTGCCACTGTAGAAGAGCCAAGGAAGAG >In-frame_PDGFRL_ENST00000398074_chr8_17447274_+_VPS37A_ENST00000324849_chr8_17132242_+_1131nt ATGAAGGTCTGGCTGCTGCTTGGTCTTCTGCTGGTGCACGAAGCGCTGGAGGATGTTACTGGCCAACACCTTCCCAAGAACAAGCGTCCA AAAGAACCAGGAGAGAATAGAATCAAACCTACCAACAAGAAGGTGAAGCCCAAAATTCCTAAAATGAAGGACAGGGACTCAGCCAATTCA GCACCAAAGACGCAGTCTATCATGATGCAAGTGCTGGATAAAGGTCGCTTCCAGAAACCCGCCGCTACCCTGAGTCTGCTGGCGGGGCAA ACTGTAGAGCTTCGATGTAAAGGGAGTAGAATTGGGTGGAGCTACCCTGCGTATCTGGACACCTTTAAGGATTCTCGCCTCAGTCTATAC AGTAACCCAAGTGGGATGTCTCCTTATGCTTCTCAGGGTTTTCCATTTCTTCCTCCATATCCTCCACAAGAAGCAAACAGGAGTATCACT TCTTTATCTGTTGCTGACACTGTTTCTTCTTCAACAACAAGTCATACCACAGCCAAGCCTGCCGCTCCTTCATTTGGTGTCCTTTCAAAT CTGCCATTACCCATTCCCACAGTGGATGCTTCAATACCGACAAGCCAAAATGGTTTTGGGTACAAGATGCCAGATGTCCCTGATGCATTT CCAGAACTCTCAGAACTAAGTGTGTCACAACTCACAGATATGAATGAACAAGAGGAGGTATTACTAGAACAGTTTCTGACTTTGCCTCAA CTAAAACAAATTATTACCGACAAAGATGACTTAGTAAAAAGTATTGAGGAACTAGCAAGAAAAAATCTCCTTTTGGAGCCCAGCTTGGAA GCCAAAAGACAAACTGTTTTAGATAAGTATGAATTACTTACACAGATGAAGTCCACTTTCGAAAAGAAGATGCAAAGGCAGCATGAACTT AGTGAGAGCTGTAGTGCAAGTGCCCTTCAGGCAAGATTGAAAGTAGCTGCACATGAAGCTGAGGAAGAATCTGATAATATTGCAGAAGAC TTCTTGGAGGGAAAGATGGAAATAGATGATTTTCTCAGTAGCTTCATGGAAAAGAGAACAATTTGCCACTGTAGAAGAGCCAAGGAAGAG |
| * Fusion transcript sequences (Full-length transcript). |
| >In-frame_PDGFRL_ENST00000541323_chr8_17447274_+_VPS37A_ENST00000324849_chr8_17132242_+_4614nt ACTTCTGCCTTGTTATCAGAGGAGCGAGGATGTGGCCTGTGTGCCGCCTAATCATGCCTAGAACTGTCTGCACCTGCTGATCTTTTGCTT CTGCGAACTGGCTGCACCTGCTGTTCTCCTGCTCATACCCTAGCCCGTGCTTACCCTAATTCCCTGTTCTCCTGCCTCACCACCAGAGGC CCGGGTTGTCTGCACAGTCTCATTTTCCACGTTATTCCTGTAATGAACCCGTCCTCCCACCCCCACCAGCAGTTACAGGGCTGGGTGCGG AGACCAACTCTGGCCAGACACAGAGGAGCAGCAAGAACCCGGGGCAACGGTCCTGTGAAAACCGAATCCTCCCGCTTCGGCGTCCCAGGA GCCCGCCCCTCGCCCGCCGCCTCCCCTGCGTCCCCGCCCCGCGCAGCCGCCGCGCTCCTGCGCTCCGAGGTCCGAGGTTCCCGAGATGAA GGTCTGGCTGCTGCTTGGTCTTCTGCTGGTGCACGAAGCGCTGGAGGATGTTACTGGCCAACACCTTCCCAAGAACAAGCGTCCAAAAGA ACCAGGAGAGAATAGAATCAAACCTACCAACAAGAAGGTGAAGCCCAAAATTCCTAAAATGAAGGACAGGGACTCAGCCAATTCAGCACC AAAGACGCAGTCTATCATGATGCAAGTGCTGGATAAAGGTCGCTTCCAGAAACCCGCCGCTACCCTGAGTCTGCTGGCGGGGCAAACTGT AGAGCTTCGATGTAAAGGGAGTAGAATTGGGTGGAGCTACCCTGCGTATCTGGACACCTTTAAGGATTCTCGCCTCAGTCTATACAGTAA CCCAAGTGGGATGTCTCCTTATGCTTCTCAGGGTTTTCCATTTCTTCCTCCATATCCTCCACAAGAAGCAAACAGGAGTATCACTTCTTT ATCTGTTGCTGACACTGTTTCTTCTTCAACAACAAGTCATACCACAGCCAAGCCTGCCGCTCCTTCATTTGGTGTCCTTTCAAATCTGCC ATTACCCATTCCCACAGTGGATGCTTCAATACCGACAAGCCAAAATGGTTTTGGGTACAAGATGCCAGATGTCCCTGATGCATTTCCAGA ACTCTCAGAACTAAGTGTGTCACAACTCACAGATATGAATGAACAAGAGGAGGTATTACTAGAACAGTTTCTGACTTTGCCTCAACTAAA ACAAATTATTACCGACAAAGATGACTTAGTAAAAAGTATTGAGGAACTAGCAAGAAAAAATCTCCTTTTGGAGCCCAGCTTGGAAGCCAA AAGACAAACTGTTTTAGATAAGTATGAATTACTTACACAGATGAAGTCCACTTTCGAAAAGAAGATGCAAAGGCAGCATGAACTTAGTGA GAGCTGTAGTGCAAGTGCCCTTCAGGCAAGATTGAAAGTAGCTGCACATGAAGCTGAGGAAGAATCTGATAATATTGCAGAAGACTTCTT GGAGGGAAAGATGGAAATAGATGATTTTCTCAGTAGCTTCATGGAAAAGAGAACAATTTGCCACTGTAGAAGAGCCAAGGAAGAGAAACT TCAGCAGGCGATAGCAATGCACAGCCAATTTCATGCTCCACTATAGATTTTCCTGGAAACATGAACTGCCAAGAGAGGAATGGGACACAA AACCAAACACTGTTTTATATTTATGGTTTGCAAACTGGCATTTCATCAGTGGCTAAATTCACAGATATCCTATATAGATTGTATACAGAA CTGAGACTGATTTTGTACCGATTAGAATGATTGCTATGATCTTTGAGAAATTTTTCTGCACTATTTGCACTGAAATGTTTATTTATTGTT GATAAATTGTATCATATTTAAGTTCCACTGCTGTTCCTCTTACCTTGATTAAATGCCTATGCATGTACTTTTAGCTAGTTTTTAATATTT TATAAAACTTCATTTAAATTTGTATTTTTAACTTGAAGTTCCATTTCTTTATCAAGGATGGTATTTAGATTTTTTTCCTCTTAACCTTTT TTCAAAAACTATTTTCAACTGTGAGGAAACCCTTATTTTTCTTTCTTTGTGGATAAAACTTTCAAAAGCAATTTAAGATATTCATAGTGT TAGGAAACACCAAACCTGCCTATGTGCCATCTCACAAAAGAAACTTTTAATACCTACAATAAATCAAAAGAATAAACCAGCTGTTCTTAT ATATTGTTTCATTTTTAAAACTAAAGATGCATTTAAGAAGCAATACAAGTAAATATTTTACCTAATAGGAAAAAAAAAAGTTGCCTTTCA TTTAAACCATTCCAACAGAAATTCTTATGCTAATTTAAAACATATATATATCTGGTAGGTTTGTGGTTGGATAGGTTTTCTAAATTCCTA ATGTTAAAAACAATCTTTATGTTAATATACACTAAATCTATACACAAAAAAAGTCAGTGAACTTTTCTGACCTTTACTGTGAGTTACCTT TTCCTAAGAGGAAAGCTATAGTAATAAGTAAAATTTAATTTTTAGGCAATCCTGATTTTTAATGAATTTAATTGAGTGTTCTTGTATACT ACATTGAGCAGTTTGCTTCTATACCGTGTCACAAAATTCATGTATTTCTTGAGAAGCCCTAAAAGCTCATAAAGGAAAATGCCGTGAACT ATGTAGCTCAGGCTTGGTAAGGTGCCATCTAAATTACAAAACAAACTAATGCATAATTTTGCTTAAATTTCATCCCAGTATGATTGTCTT CCCAACACCAGCATATAGTATAGATTGTCTGTCTTTTTTATATTTTTTAGTTCTTCCTGTACATGTTTTTGGCAATAAAGTTATAGGAAG AACAAAATTATTTTGTTAGAATTAAAACATGCTTAATATTTAGTCTGTTTGTGGAGGGCAGGTATTCACGTGGACTGAGATACAATGTTG GATACAGAAAATAACTTTCATTGTCTTCCTGACACTGTGCTAAGGACATGCTGTTAAAGCTTCAAAGTGACCAGATGAGGAAGGAATAAT TAATTATTACTCCTGATTTGTAGATAACTGAGGTAAGAGTGTTTCAAATTTATGATAGTCTTTTGGGTATTCAGAAACCTTTCCTTATAC TGCACTGGCCACCAGAGCTTAATTTTCCCAGCAGTTACAGCAATGGGAGATAGAACAGTCTCAATCTTTTGCCAACCATCAGGTTCCTAG AAACCAGGTAGGTGTATCCCATAACAAGGGAGGAGCATACCACAGCCCCTCATTTGATTAATTCATTTGATCTATCTATGTTATTAAGTA CCTACTAGGAATAAGGCATTGTGGAAATACTATACAAAGATAAACATTGTTTAGATGCTTATCTACTTTCCTTTTCACCAGAAAAACAGA AAAAAAAGAAACATTTTCTTACAGAGTAAAAATGTTCTACATAATCACATGAGTAGTTCATCTCAGTGTTTTTTATTCTTTAAAGTTGAA CTATCCCAGTTTCATTCTATACCATTCATTGGATAACCTTGTTACAACCCAGTCATGAAACAGAGCAGTGTGATCAGTTATCTGCATTTA ACAAATAGACAAATCAGTTTACATAAAGGTTATGTATGTCACCCACGATGAAAAGAATCTGCATTTGAATATGCCCGTATGAATGTGGGT TCTGTTTTTGCAACAGAGATTAAGTGACCATTTTTTCTAATTTTATGGCTATATATTTTCTTCATAAAAATTGGTCACATCGGAGAAGCA GTGCCACAGGAAAAATGAAATGCATGTGAAAGTTTGTATTCTGATTTTACAAGATGAGATAGAAATCAGAATTAAAGAGGAATACTTAGG AGTTACTAGGCTAATCAGTGTACGAATTTGTCATAGGTAGAGATTTAAAGGTTAATATCTTAAAATAGAAGAAAATTCTAAATCAATCAA TCAGTGAGATATAAACTAAACAGACCCACTTCAAAGTTGAAAGAAATTTCTAGGCATAAATTGAGACTAGGAAATTTATATCAGAATAGA GGGTGCTTGACACATATATATGCTTAAATTGAAGGACAGCTCAGATTCATTTTTAGGAGAAGAAAGTAAACTAATGTGCTCTTAAAGAAT AAAAATTTATTCTATGGTTTCTGTCTCTGATCATCACCTTCCATTCTATAAAAAGCTCAGTTACTGATTTGCTGGGTCATGGTCAAAATT CTTACCTATTTATTTCATATCAACTTTAAAAAATAAATTACTTGCATTCTATATATTACTAATTGGGAAGTAATATGCCTCAAATCAGTT TTATACTGGATTATTCCCTATGCTTTAAACCACTGCTCTCAATAAAACACTTCCTGATTAATGTTTGATTATTAGATATTTTAGTCTTGT TGGGGATATTTTAGTCTTGTTGGGTTAGCCATGCTCTGAAGAATCTGTGAAAGTACAGTAAAGTTTTAATAAGCAATAAATGTAACCTTT TATATAAATCTCAGTGCTAGGTTAACTTCTAATAAGCAGACGAACATGTTACATAAATTATAATGTCTGTCTTGTAAAAAAGTTGAGGGG ACTAAAAGTTTATGACTCTGATATGGAAGTTGTCATATTAAAAAACTACATTTTAAAACATCAAATATTTATACTATTTGCTTTTCAAAT >In-frame_PDGFRL_ENST00000251630_chr8_17447274_+_VPS37A_ENST00000324849_chr8_17132242_+_4610nt ACTTCTGCCTTGTTATCAGAGGAGCGAGGATGTGGCCTGTGTGCCGCCTAATCATGCCTAGAACTGTCTGCACCTGCTGATCTTTTGCTT CTGCGAACTGGCTGCACCTGCTGTTCTCCTGCTCATACCCTAGCCCGTGCTTACCCTAATTCCCTGTTCTCCTGCCTCACCACCAGAGGC CCGGGTTGTCTGCACAGTCTCATTTTCCACGTTATTCCTGTAATGAACCCGTCCTCCCACCCCCACCAGCAGTTACAGGGCTGGGTGCGG AGACCAACTCTGGCCAGACACAGAGGAGCAGCAAGAACCCGGGGCAACGGTCCTAAACCGAATCCTCCCGCTTCGGCGTCCCAGGAGCCC GCCCCTCGCCCGCCGCCTCCCCTGCGTCCCCGCCCCGCGCAGCCGCCGCGCTCCTGCGCTCCGAGGTCCGAGGTTCCCGAGATGAAGGTC TGGCTGCTGCTTGGTCTTCTGCTGGTGCACGAAGCGCTGGAGGATGTTACTGGCCAACACCTTCCCAAGAACAAGCGTCCAAAAGAACCA GGAGAGAATAGAATCAAACCTACCAACAAGAAGGTGAAGCCCAAAATTCCTAAAATGAAGGACAGGGACTCAGCCAATTCAGCACCAAAG ACGCAGTCTATCATGATGCAAGTGCTGGATAAAGGTCGCTTCCAGAAACCCGCCGCTACCCTGAGTCTGCTGGCGGGGCAAACTGTAGAG CTTCGATGTAAAGGGAGTAGAATTGGGTGGAGCTACCCTGCGTATCTGGACACCTTTAAGGATTCTCGCCTCAGTCTATACAGTAACCCA AGTGGGATGTCTCCTTATGCTTCTCAGGGTTTTCCATTTCTTCCTCCATATCCTCCACAAGAAGCAAACAGGAGTATCACTTCTTTATCT GTTGCTGACACTGTTTCTTCTTCAACAACAAGTCATACCACAGCCAAGCCTGCCGCTCCTTCATTTGGTGTCCTTTCAAATCTGCCATTA CCCATTCCCACAGTGGATGCTTCAATACCGACAAGCCAAAATGGTTTTGGGTACAAGATGCCAGATGTCCCTGATGCATTTCCAGAACTC TCAGAACTAAGTGTGTCACAACTCACAGATATGAATGAACAAGAGGAGGTATTACTAGAACAGTTTCTGACTTTGCCTCAACTAAAACAA ATTATTACCGACAAAGATGACTTAGTAAAAAGTATTGAGGAACTAGCAAGAAAAAATCTCCTTTTGGAGCCCAGCTTGGAAGCCAAAAGA CAAACTGTTTTAGATAAGTATGAATTACTTACACAGATGAAGTCCACTTTCGAAAAGAAGATGCAAAGGCAGCATGAACTTAGTGAGAGC TGTAGTGCAAGTGCCCTTCAGGCAAGATTGAAAGTAGCTGCACATGAAGCTGAGGAAGAATCTGATAATATTGCAGAAGACTTCTTGGAG GGAAAGATGGAAATAGATGATTTTCTCAGTAGCTTCATGGAAAAGAGAACAATTTGCCACTGTAGAAGAGCCAAGGAAGAGAAACTTCAG CAGGCGATAGCAATGCACAGCCAATTTCATGCTCCACTATAGATTTTCCTGGAAACATGAACTGCCAAGAGAGGAATGGGACACAAAACC AAACACTGTTTTATATTTATGGTTTGCAAACTGGCATTTCATCAGTGGCTAAATTCACAGATATCCTATATAGATTGTATACAGAACTGA GACTGATTTTGTACCGATTAGAATGATTGCTATGATCTTTGAGAAATTTTTCTGCACTATTTGCACTGAAATGTTTATTTATTGTTGATA AATTGTATCATATTTAAGTTCCACTGCTGTTCCTCTTACCTTGATTAAATGCCTATGCATGTACTTTTAGCTAGTTTTTAATATTTTATA AAACTTCATTTAAATTTGTATTTTTAACTTGAAGTTCCATTTCTTTATCAAGGATGGTATTTAGATTTTTTTCCTCTTAACCTTTTTTCA AAAACTATTTTCAACTGTGAGGAAACCCTTATTTTTCTTTCTTTGTGGATAAAACTTTCAAAAGCAATTTAAGATATTCATAGTGTTAGG AAACACCAAACCTGCCTATGTGCCATCTCACAAAAGAAACTTTTAATACCTACAATAAATCAAAAGAATAAACCAGCTGTTCTTATATAT TGTTTCATTTTTAAAACTAAAGATGCATTTAAGAAGCAATACAAGTAAATATTTTACCTAATAGGAAAAAAAAAAGTTGCCTTTCATTTA AACCATTCCAACAGAAATTCTTATGCTAATTTAAAACATATATATATCTGGTAGGTTTGTGGTTGGATAGGTTTTCTAAATTCCTAATGT TAAAAACAATCTTTATGTTAATATACACTAAATCTATACACAAAAAAAGTCAGTGAACTTTTCTGACCTTTACTGTGAGTTACCTTTTCC TAAGAGGAAAGCTATAGTAATAAGTAAAATTTAATTTTTAGGCAATCCTGATTTTTAATGAATTTAATTGAGTGTTCTTGTATACTACAT TGAGCAGTTTGCTTCTATACCGTGTCACAAAATTCATGTATTTCTTGAGAAGCCCTAAAAGCTCATAAAGGAAAATGCCGTGAACTATGT AGCTCAGGCTTGGTAAGGTGCCATCTAAATTACAAAACAAACTAATGCATAATTTTGCTTAAATTTCATCCCAGTATGATTGTCTTCCCA ACACCAGCATATAGTATAGATTGTCTGTCTTTTTTATATTTTTTAGTTCTTCCTGTACATGTTTTTGGCAATAAAGTTATAGGAAGAACA AAATTATTTTGTTAGAATTAAAACATGCTTAATATTTAGTCTGTTTGTGGAGGGCAGGTATTCACGTGGACTGAGATACAATGTTGGATA CAGAAAATAACTTTCATTGTCTTCCTGACACTGTGCTAAGGACATGCTGTTAAAGCTTCAAAGTGACCAGATGAGGAAGGAATAATTAAT TATTACTCCTGATTTGTAGATAACTGAGGTAAGAGTGTTTCAAATTTATGATAGTCTTTTGGGTATTCAGAAACCTTTCCTTATACTGCA CTGGCCACCAGAGCTTAATTTTCCCAGCAGTTACAGCAATGGGAGATAGAACAGTCTCAATCTTTTGCCAACCATCAGGTTCCTAGAAAC CAGGTAGGTGTATCCCATAACAAGGGAGGAGCATACCACAGCCCCTCATTTGATTAATTCATTTGATCTATCTATGTTATTAAGTACCTA CTAGGAATAAGGCATTGTGGAAATACTATACAAAGATAAACATTGTTTAGATGCTTATCTACTTTCCTTTTCACCAGAAAAACAGAAAAA AAAGAAACATTTTCTTACAGAGTAAAAATGTTCTACATAATCACATGAGTAGTTCATCTCAGTGTTTTTTATTCTTTAAAGTTGAACTAT CCCAGTTTCATTCTATACCATTCATTGGATAACCTTGTTACAACCCAGTCATGAAACAGAGCAGTGTGATCAGTTATCTGCATTTAACAA ATAGACAAATCAGTTTACATAAAGGTTATGTATGTCACCCACGATGAAAAGAATCTGCATTTGAATATGCCCGTATGAATGTGGGTTCTG TTTTTGCAACAGAGATTAAGTGACCATTTTTTCTAATTTTATGGCTATATATTTTCTTCATAAAAATTGGTCACATCGGAGAAGCAGTGC CACAGGAAAAATGAAATGCATGTGAAAGTTTGTATTCTGATTTTACAAGATGAGATAGAAATCAGAATTAAAGAGGAATACTTAGGAGTT ACTAGGCTAATCAGTGTACGAATTTGTCATAGGTAGAGATTTAAAGGTTAATATCTTAAAATAGAAGAAAATTCTAAATCAATCAATCAG TGAGATATAAACTAAACAGACCCACTTCAAAGTTGAAAGAAATTTCTAGGCATAAATTGAGACTAGGAAATTTATATCAGAATAGAGGGT GCTTGACACATATATATGCTTAAATTGAAGGACAGCTCAGATTCATTTTTAGGAGAAGAAAGTAAACTAATGTGCTCTTAAAGAATAAAA ATTTATTCTATGGTTTCTGTCTCTGATCATCACCTTCCATTCTATAAAAAGCTCAGTTACTGATTTGCTGGGTCATGGTCAAAATTCTTA CCTATTTATTTCATATCAACTTTAAAAAATAAATTACTTGCATTCTATATATTACTAATTGGGAAGTAATATGCCTCAAATCAGTTTTAT ACTGGATTATTCCCTATGCTTTAAACCACTGCTCTCAATAAAACACTTCCTGATTAATGTTTGATTATTAGATATTTTAGTCTTGTTGGG GATATTTTAGTCTTGTTGGGTTAGCCATGCTCTGAAGAATCTGTGAAAGTACAGTAAAGTTTTAATAAGCAATAAATGTAACCTTTTATA TAAATCTCAGTGCTAGGTTAACTTCTAATAAGCAGACGAACATGTTACATAAATTATAATGTCTGTCTTGTAAAAAAGTTGAGGGGACTA AAAGTTTATGACTCTGATATGGAAGTTGTCATATTAAAAAACTACATTTTAAAACATCAAATATTTATACTATTTGCTTTTCAAATAAAA >In-frame_PDGFRL_ENST00000398074_chr8_17447274_+_VPS37A_ENST00000324849_chr8_17132242_+_4230nt CCTGCGTCCCCGCCCCGCGCAGCCGCCGCGCTCCTGCGCTCCGAGGTCCGAGGTTCCCGAGATGAAGGTCTGGCTGCTGCTTGGTCTTCT GCTGGTGCACGAAGCGCTGGAGGATGTTACTGGCCAACACCTTCCCAAGAACAAGCGTCCAAAAGAACCAGGAGAGAATAGAATCAAACC TACCAACAAGAAGGTGAAGCCCAAAATTCCTAAAATGAAGGACAGGGACTCAGCCAATTCAGCACCAAAGACGCAGTCTATCATGATGCA AGTGCTGGATAAAGGTCGCTTCCAGAAACCCGCCGCTACCCTGAGTCTGCTGGCGGGGCAAACTGTAGAGCTTCGATGTAAAGGGAGTAG AATTGGGTGGAGCTACCCTGCGTATCTGGACACCTTTAAGGATTCTCGCCTCAGTCTATACAGTAACCCAAGTGGGATGTCTCCTTATGC TTCTCAGGGTTTTCCATTTCTTCCTCCATATCCTCCACAAGAAGCAAACAGGAGTATCACTTCTTTATCTGTTGCTGACACTGTTTCTTC TTCAACAACAAGTCATACCACAGCCAAGCCTGCCGCTCCTTCATTTGGTGTCCTTTCAAATCTGCCATTACCCATTCCCACAGTGGATGC TTCAATACCGACAAGCCAAAATGGTTTTGGGTACAAGATGCCAGATGTCCCTGATGCATTTCCAGAACTCTCAGAACTAAGTGTGTCACA ACTCACAGATATGAATGAACAAGAGGAGGTATTACTAGAACAGTTTCTGACTTTGCCTCAACTAAAACAAATTATTACCGACAAAGATGA CTTAGTAAAAAGTATTGAGGAACTAGCAAGAAAAAATCTCCTTTTGGAGCCCAGCTTGGAAGCCAAAAGACAAACTGTTTTAGATAAGTA TGAATTACTTACACAGATGAAGTCCACTTTCGAAAAGAAGATGCAAAGGCAGCATGAACTTAGTGAGAGCTGTAGTGCAAGTGCCCTTCA GGCAAGATTGAAAGTAGCTGCACATGAAGCTGAGGAAGAATCTGATAATATTGCAGAAGACTTCTTGGAGGGAAAGATGGAAATAGATGA TTTTCTCAGTAGCTTCATGGAAAAGAGAACAATTTGCCACTGTAGAAGAGCCAAGGAAGAGAAACTTCAGCAGGCGATAGCAATGCACAG CCAATTTCATGCTCCACTATAGATTTTCCTGGAAACATGAACTGCCAAGAGAGGAATGGGACACAAAACCAAACACTGTTTTATATTTAT GGTTTGCAAACTGGCATTTCATCAGTGGCTAAATTCACAGATATCCTATATAGATTGTATACAGAACTGAGACTGATTTTGTACCGATTA GAATGATTGCTATGATCTTTGAGAAATTTTTCTGCACTATTTGCACTGAAATGTTTATTTATTGTTGATAAATTGTATCATATTTAAGTT CCACTGCTGTTCCTCTTACCTTGATTAAATGCCTATGCATGTACTTTTAGCTAGTTTTTAATATTTTATAAAACTTCATTTAAATTTGTA TTTTTAACTTGAAGTTCCATTTCTTTATCAAGGATGGTATTTAGATTTTTTTCCTCTTAACCTTTTTTCAAAAACTATTTTCAACTGTGA GGAAACCCTTATTTTTCTTTCTTTGTGGATAAAACTTTCAAAAGCAATTTAAGATATTCATAGTGTTAGGAAACACCAAACCTGCCTATG TGCCATCTCACAAAAGAAACTTTTAATACCTACAATAAATCAAAAGAATAAACCAGCTGTTCTTATATATTGTTTCATTTTTAAAACTAA AGATGCATTTAAGAAGCAATACAAGTAAATATTTTACCTAATAGGAAAAAAAAAAGTTGCCTTTCATTTAAACCATTCCAACAGAAATTC TTATGCTAATTTAAAACATATATATATCTGGTAGGTTTGTGGTTGGATAGGTTTTCTAAATTCCTAATGTTAAAAACAATCTTTATGTTA ATATACACTAAATCTATACACAAAAAAAGTCAGTGAACTTTTCTGACCTTTACTGTGAGTTACCTTTTCCTAAGAGGAAAGCTATAGTAA TAAGTAAAATTTAATTTTTAGGCAATCCTGATTTTTAATGAATTTAATTGAGTGTTCTTGTATACTACATTGAGCAGTTTGCTTCTATAC CGTGTCACAAAATTCATGTATTTCTTGAGAAGCCCTAAAAGCTCATAAAGGAAAATGCCGTGAACTATGTAGCTCAGGCTTGGTAAGGTG CCATCTAAATTACAAAACAAACTAATGCATAATTTTGCTTAAATTTCATCCCAGTATGATTGTCTTCCCAACACCAGCATATAGTATAGA TTGTCTGTCTTTTTTATATTTTTTAGTTCTTCCTGTACATGTTTTTGGCAATAAAGTTATAGGAAGAACAAAATTATTTTGTTAGAATTA AAACATGCTTAATATTTAGTCTGTTTGTGGAGGGCAGGTATTCACGTGGACTGAGATACAATGTTGGATACAGAAAATAACTTTCATTGT CTTCCTGACACTGTGCTAAGGACATGCTGTTAAAGCTTCAAAGTGACCAGATGAGGAAGGAATAATTAATTATTACTCCTGATTTGTAGA TAACTGAGGTAAGAGTGTTTCAAATTTATGATAGTCTTTTGGGTATTCAGAAACCTTTCCTTATACTGCACTGGCCACCAGAGCTTAATT TTCCCAGCAGTTACAGCAATGGGAGATAGAACAGTCTCAATCTTTTGCCAACCATCAGGTTCCTAGAAACCAGGTAGGTGTATCCCATAA CAAGGGAGGAGCATACCACAGCCCCTCATTTGATTAATTCATTTGATCTATCTATGTTATTAAGTACCTACTAGGAATAAGGCATTGTGG AAATACTATACAAAGATAAACATTGTTTAGATGCTTATCTACTTTCCTTTTCACCAGAAAAACAGAAAAAAAAGAAACATTTTCTTACAG AGTAAAAATGTTCTACATAATCACATGAGTAGTTCATCTCAGTGTTTTTTATTCTTTAAAGTTGAACTATCCCAGTTTCATTCTATACCA TTCATTGGATAACCTTGTTACAACCCAGTCATGAAACAGAGCAGTGTGATCAGTTATCTGCATTTAACAAATAGACAAATCAGTTTACAT AAAGGTTATGTATGTCACCCACGATGAAAAGAATCTGCATTTGAATATGCCCGTATGAATGTGGGTTCTGTTTTTGCAACAGAGATTAAG TGACCATTTTTTCTAATTTTATGGCTATATATTTTCTTCATAAAAATTGGTCACATCGGAGAAGCAGTGCCACAGGAAAAATGAAATGCA TGTGAAAGTTTGTATTCTGATTTTACAAGATGAGATAGAAATCAGAATTAAAGAGGAATACTTAGGAGTTACTAGGCTAATCAGTGTACG AATTTGTCATAGGTAGAGATTTAAAGGTTAATATCTTAAAATAGAAGAAAATTCTAAATCAATCAATCAGTGAGATATAAACTAAACAGA CCCACTTCAAAGTTGAAAGAAATTTCTAGGCATAAATTGAGACTAGGAAATTTATATCAGAATAGAGGGTGCTTGACACATATATATGCT TAAATTGAAGGACAGCTCAGATTCATTTTTAGGAGAAGAAAGTAAACTAATGTGCTCTTAAAGAATAAAAATTTATTCTATGGTTTCTGT CTCTGATCATCACCTTCCATTCTATAAAAAGCTCAGTTACTGATTTGCTGGGTCATGGTCAAAATTCTTACCTATTTATTTCATATCAAC TTTAAAAAATAAATTACTTGCATTCTATATATTACTAATTGGGAAGTAATATGCCTCAAATCAGTTTTATACTGGATTATTCCCTATGCT TTAAACCACTGCTCTCAATAAAACACTTCCTGATTAATGTTTGATTATTAGATATTTTAGTCTTGTTGGGGATATTTTAGTCTTGTTGGG TTAGCCATGCTCTGAAGAATCTGTGAAAGTACAGTAAAGTTTTAATAAGCAATAAATGTAACCTTTTATATAAATCTCAGTGCTAGGTTA ACTTCTAATAAGCAGACGAACATGTTACATAAATTATAATGTCTGTCTTGTAAAAAAGTTGAGGGGACTAAAAGTTTATGACTCTGATAT GGAAGTTGTCATATTAAAAAACTACATTTTAAAACATCAAATATTTATACTATTTGCTTTTCAAATAAAAGCATAGTGCTGTTTGGCATA |
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FusionGenePPI for PDGFRL_VPS37A |
| Go to ChiPPI (Chimeric Protein-Protein interactions) to see the chimeric PPI interaction in . |
| Protein-protein interactors with each fusion partner protein in wild-type (BIOGRID-3.4.160) |
| Hgene | Hgene's interactors | Tgene | Tgene's interactors |
| PDGFRL | VPS37A | TSG101, VPS28, MVB12A, MVB12B, ALG2, UBAP1, APP, KDM1A, TRIM42, ARRDC1, XPO1, UBC |
| - Retained PPIs in in-frame fusion. |
| Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Still interaction with |
| - Lost PPIs in in-frame fusion. |
| Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Interaction lost with |
| - Retained PPIs, but lost function due to frame-shift fusion. |
| Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Interaction lost with |
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RelatedDrugs for PDGFRL_VPS37A |
| Drugs targeting genes involved in this fusion gene. (DrugBank Version 5.1.0 2018-04-02) |
| Partner | Gene | UniProtAcc | DrugBank ID | Drug name | Drug activity | Drug type | Drug status |
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RelatedDiseases for PDGFRL_VPS37A |
| Diseases associated with fusion partners. (DisGeNet 4.0) |
| Partner | Gene | Disease ID | Disease name | # pubmeds | Source |
| Hgene | PDGFRL | C1527249 | Colorectal Cancer | 1 | UNIPROT |
| Tgene | VPS37A | C3539494 | SPASTIC PARAPLEGIA 53, AUTOSOMAL RECESSIVE | 1 | ORPHANET;UNIPROT |
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