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Fusion gene ID: 26309 |
FusionGeneSummary for PCTP_CALCOCO2 |
 Fusion gene summary |
| Fusion gene information | Fusion gene name: PCTP_CALCOCO2 | Fusion gene ID: 26309 | Hgene | Tgene | Gene symbol | PCTP | CALCOCO2 | Gene ID | 58488 | 10241 |
| Gene name | phosphatidylcholine transfer protein | calcium binding and coiled-coil domain 2 | |
| Synonyms | PC-TP|STARD2 | NDP52 | |
| Cytomap | 17q22 | 17q21.32 | |
| Type of gene | protein-coding | protein-coding | |
| Description | phosphatidylcholine transfer proteinSTART domain-containing protein 2StAR-related lipid transfer (START) domain containing 2stAR-related lipid transfer protein 2 | calcium-binding and coiled-coil domain-containing protein 2antigen nuclear dot 52 kDa proteinnuclear domain 10 protein 52nuclear domain 10 protein NDP52nuclear dot protein 52 | |
| Modification date | 20180523 | 20180522 | |
| UniProtAcc | Q9UKL6 | Q13137 | |
| Ensembl transtripts involved in fusion gene | ENST00000573500, ENST00000576221, ENST00000268896, ENST00000576183, ENST00000325214, | ENST00000258947, ENST00000509507, ENST00000448105, ENST00000416445, ENST00000508679, ENST00000510997, | |
| Fusion gene scores | * DoF score | 3 X 2 X 2=12 | 6 X 5 X 3=90 |
| # samples | 3 | 6 | |
| ** MAII score | log2(3/12*10)=1.32192809488736 effective Gene in Pan-Cancer Fusion Genes (eGinPCFGs). DoF>8 and MAII>0 | log2(6/90*10)=-0.584962500721156 possibly effective Gene in Pan-Cancer Fusion Genes (peGinPCFGs). DoF>8 and MAII<0 | |
| Context | PubMed: PCTP [Title/Abstract] AND CALCOCO2 [Title/Abstract] AND fusion [Title/Abstract] | ||
| Functional or gene categories assigned by FusionGDB annotation | |||
| * DoF score (Degree of Frequency) = # partners X # break points X # cancer types ** MAII score (Major Active Isofusion Index) = log2(# samples/DoF score*10) |
| Gene ontology of each fusion partner gene with evidence of Inferred from Direct Assay (IDA) from Entrez |
| Partner | Gene | GO ID | GO term | PubMed ID |
| Hgene | PCTP | GO:0015914 | phospholipid transport | 12055623 |
| Tgene | CALCOCO2 | GO:0034341 | response to interferon-gamma | 9230084 |
| Fusion gene information from three resources (ChiTars (NAR, 2018), tumorfusions (NAR, 2018), Gao et al. (Cell, 2018)) * All genome coordinats were lifted-over on hg19. * Click on the break point to see the gene structure around the break point region using the UCSC Genome Browser. |
| Data type | Source | Cancer type | Sample | Hgene | Hchr | Hbp | Hstrand | Tgene | Tchr | Tbp | Tstrand |
| TCGA | RV | BRCA | TCGA-AN-A04C-01A | PCTP | chr17 | 53828605 | + | CALCOCO2 | chr17 | 46937676 | + |
| * LD: Li Ding group's fusion gene list RV: Roel Verhaak group's fusion gene list ChiTaRs fusion database |
| Open reading frame (ORF) analsis of fusion genes based on Ensembl gene isoform structure. * Click on the break point to see the gene structure around the break point region using the UCSC Genome Browser. |
| ORF | Henst | Tenst | Hgene | Hchr | Hbp | Hstrand | Tgene | Tchr | Tbp | Tstrand |
| In-frame | ENST00000573500 | ENST00000258947 | PCTP | chr17 | 53828605 | + | CALCOCO2 | chr17 | 46937676 | + |
| In-frame | ENST00000573500 | ENST00000509507 | PCTP | chr17 | 53828605 | + | CALCOCO2 | chr17 | 46937676 | + |
| In-frame | ENST00000573500 | ENST00000448105 | PCTP | chr17 | 53828605 | + | CALCOCO2 | chr17 | 46937676 | + |
| In-frame | ENST00000573500 | ENST00000416445 | PCTP | chr17 | 53828605 | + | CALCOCO2 | chr17 | 46937676 | + |
| In-frame | ENST00000573500 | ENST00000508679 | PCTP | chr17 | 53828605 | + | CALCOCO2 | chr17 | 46937676 | + |
| 5CDS-intron | ENST00000573500 | ENST00000510997 | PCTP | chr17 | 53828605 | + | CALCOCO2 | chr17 | 46937676 | + |
| intron-3CDS | ENST00000576221 | ENST00000258947 | PCTP | chr17 | 53828605 | + | CALCOCO2 | chr17 | 46937676 | + |
| intron-3CDS | ENST00000576221 | ENST00000509507 | PCTP | chr17 | 53828605 | + | CALCOCO2 | chr17 | 46937676 | + |
| intron-3CDS | ENST00000576221 | ENST00000448105 | PCTP | chr17 | 53828605 | + | CALCOCO2 | chr17 | 46937676 | + |
| intron-3CDS | ENST00000576221 | ENST00000416445 | PCTP | chr17 | 53828605 | + | CALCOCO2 | chr17 | 46937676 | + |
| intron-3CDS | ENST00000576221 | ENST00000508679 | PCTP | chr17 | 53828605 | + | CALCOCO2 | chr17 | 46937676 | + |
| intron-intron | ENST00000576221 | ENST00000510997 | PCTP | chr17 | 53828605 | + | CALCOCO2 | chr17 | 46937676 | + |
| In-frame | ENST00000268896 | ENST00000258947 | PCTP | chr17 | 53828605 | + | CALCOCO2 | chr17 | 46937676 | + |
| In-frame | ENST00000268896 | ENST00000509507 | PCTP | chr17 | 53828605 | + | CALCOCO2 | chr17 | 46937676 | + |
| In-frame | ENST00000268896 | ENST00000448105 | PCTP | chr17 | 53828605 | + | CALCOCO2 | chr17 | 46937676 | + |
| In-frame | ENST00000268896 | ENST00000416445 | PCTP | chr17 | 53828605 | + | CALCOCO2 | chr17 | 46937676 | + |
| In-frame | ENST00000268896 | ENST00000508679 | PCTP | chr17 | 53828605 | + | CALCOCO2 | chr17 | 46937676 | + |
| 5CDS-intron | ENST00000268896 | ENST00000510997 | PCTP | chr17 | 53828605 | + | CALCOCO2 | chr17 | 46937676 | + |
| In-frame | ENST00000576183 | ENST00000258947 | PCTP | chr17 | 53828605 | + | CALCOCO2 | chr17 | 46937676 | + |
| In-frame | ENST00000576183 | ENST00000509507 | PCTP | chr17 | 53828605 | + | CALCOCO2 | chr17 | 46937676 | + |
| In-frame | ENST00000576183 | ENST00000448105 | PCTP | chr17 | 53828605 | + | CALCOCO2 | chr17 | 46937676 | + |
| In-frame | ENST00000576183 | ENST00000416445 | PCTP | chr17 | 53828605 | + | CALCOCO2 | chr17 | 46937676 | + |
| In-frame | ENST00000576183 | ENST00000508679 | PCTP | chr17 | 53828605 | + | CALCOCO2 | chr17 | 46937676 | + |
| 5CDS-intron | ENST00000576183 | ENST00000510997 | PCTP | chr17 | 53828605 | + | CALCOCO2 | chr17 | 46937676 | + |
| intron-3CDS | ENST00000325214 | ENST00000258947 | PCTP | chr17 | 53828605 | + | CALCOCO2 | chr17 | 46937676 | + |
| intron-3CDS | ENST00000325214 | ENST00000509507 | PCTP | chr17 | 53828605 | + | CALCOCO2 | chr17 | 46937676 | + |
| intron-3CDS | ENST00000325214 | ENST00000448105 | PCTP | chr17 | 53828605 | + | CALCOCO2 | chr17 | 46937676 | + |
| intron-3CDS | ENST00000325214 | ENST00000416445 | PCTP | chr17 | 53828605 | + | CALCOCO2 | chr17 | 46937676 | + |
| intron-3CDS | ENST00000325214 | ENST00000508679 | PCTP | chr17 | 53828605 | + | CALCOCO2 | chr17 | 46937676 | + |
| intron-intron | ENST00000325214 | ENST00000510997 | PCTP | chr17 | 53828605 | + | CALCOCO2 | chr17 | 46937676 | + |
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FusionProtFeatures for PCTP_CALCOCO2 |
| Main function of each fusion partner protein. (from UniProt) |
| Hgene | Tgene |
| PCTP | CALCOCO2 |
| Catalyzes the transfer of phosphatidylcholine betweenmembranes. Binds a single lipid molecule.{ECO:0000269|PubMed:12055623}. |
| Retention analysis result of each fusion partner protein across 39 protein features of UniProt such as six molecule processing features, 13 region features, four site features, six amino acid modification features, two natural variation features, five experimental info features, and 3 secondary structure features. Here, because of limited space for viewing, we only show the protein feature retention information belong to the 13 regional features. All retention annotation result can be downloaded at . * Minus value of BPloci means that the break pointn is located before the CDS. |
| - In-frame and retained protein feature among the 13 regional features. |
| Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Protein feature | Protein feature note |
| - In-frame and not-retained protein feature among the 13 regional features. |
| Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Protein feature | Protein feature note |
| Hgene | >PCTP | chr17:53828605 | chr17:46937676 | ENST00000268896 | + | 1 | 6 | 1_212 | 47 | 215 | Domain | START |
| Hgene | >PCTP | chr17:53828605 | chr17:46937676 | ENST00000325214 | + | 1 | 6 | 1_212 | -51 | 143 | Domain | START |
| Tgene | CALCOCO2 | chr17:53828605 | chr17:46937676 | ENST00000258947 | + | 9 | 13 | 137_349 | 336 | 447 | Coiled coil | Ontology_term=ECO:0000255 |
| Tgene | CALCOCO2 | chr17:53828605 | chr17:46937676 | ENST00000416445 | + | 8 | 12 | 137_349 | 294 | 405 | Coiled coil | Ontology_term=ECO:0000255 |
| Tgene | CALCOCO2 | chr17:53828605 | chr17:46937676 | ENST00000448105 | + | 10 | 14 | 137_349 | 360 | 471 | Coiled coil | Ontology_term=ECO:0000255 |
| Tgene | CALCOCO2 | chr17:53828605 | chr17:46937676 | ENST00000508679 | + | 8 | 12 | 137_349 | 264 | 375 | Coiled coil | Ontology_term=ECO:0000255 |
| Tgene | CALCOCO2 | chr17:53828605 | chr17:46937676 | ENST00000509507 | + | 10 | 14 | 137_349 | 357 | 468 | Coiled coil | Ontology_term=ECO:0000255 |
| Tgene | CALCOCO2 | chr17:53828605 | chr17:46937676 | ENST00000258947 | + | 9 | 13 | 133_136 | 336 | 447 | Motif | CLIR |
| Tgene | CALCOCO2 | chr17:53828605 | chr17:46937676 | ENST00000416445 | + | 8 | 12 | 133_136 | 294 | 405 | Motif | CLIR |
| Tgene | CALCOCO2 | chr17:53828605 | chr17:46937676 | ENST00000448105 | + | 10 | 14 | 133_136 | 360 | 471 | Motif | CLIR |
| Tgene | CALCOCO2 | chr17:53828605 | chr17:46937676 | ENST00000508679 | + | 8 | 12 | 133_136 | 264 | 375 | Motif | CLIR |
| Tgene | CALCOCO2 | chr17:53828605 | chr17:46937676 | ENST00000509507 | + | 10 | 14 | 133_136 | 357 | 468 | Motif | CLIR |
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FusionGeneSequence for PCTP_CALCOCO2 |
| For in-frame fusion transcripts, we provide the fusion transcript sequences and fusion amino acid sequences. (nt: nucleotides, aa: amino acids) |
| * Fusion amino acid sequences. |
| >In-frame_PCTP_ENST00000573500_chr17_53828605_+_CALCOCO2_ENST00000258947_chr17_46937676_+_158aa MELAAGSFSEEQFWEACAELQQPALAGADWQLLVETSGISIYRLLDKLLKRENSRLLSYMGLDFNSLPYQVPTSDEGGARQNPGLAYGNP >In-frame_PCTP_ENST00000573500_chr17_53828605_+_CALCOCO2_ENST00000509507_chr17_46937676_+_158aa MELAAGSFSEEQFWEACAELQQPALAGADWQLLVETSGISIYRLLDKLLKRENSRLLSYMGLDFNSLPYQVPTSDEGGARQNPGLAYGNP >In-frame_PCTP_ENST00000573500_chr17_53828605_+_CALCOCO2_ENST00000448105_chr17_46937676_+_158aa MELAAGSFSEEQFWEACAELQQPALAGADWQLLVETSGISIYRLLDKLLKRENSRLLSYMGLDFNSLPYQVPTSDEGGARQNPGLAYGNP >In-frame_PCTP_ENST00000573500_chr17_53828605_+_CALCOCO2_ENST00000416445_chr17_46937676_+_158aa MELAAGSFSEEQFWEACAELQQPALAGADWQLLVETSGISIYRLLDKLLKRENSRLLSYMGLDFNSLPYQVPTSDEGGARQNPGLAYGNP >In-frame_PCTP_ENST00000573500_chr17_53828605_+_CALCOCO2_ENST00000508679_chr17_46937676_+_158aa MELAAGSFSEEQFWEACAELQQPALAGADWQLLVETSGISIYRLLDKLLKRENSRLLSYMGLDFNSLPYQVPTSDEGGARQNPGLAYGNP >In-frame_PCTP_ENST00000268896_chr17_53828605_+_CALCOCO2_ENST00000258947_chr17_46937676_+_158aa MELAAGSFSEEQFWEACAELQQPALAGADWQLLVETSGISIYRLLDKLLKRENSRLLSYMGLDFNSLPYQVPTSDEGGARQNPGLAYGNP >In-frame_PCTP_ENST00000268896_chr17_53828605_+_CALCOCO2_ENST00000509507_chr17_46937676_+_158aa MELAAGSFSEEQFWEACAELQQPALAGADWQLLVETSGISIYRLLDKLLKRENSRLLSYMGLDFNSLPYQVPTSDEGGARQNPGLAYGNP >In-frame_PCTP_ENST00000268896_chr17_53828605_+_CALCOCO2_ENST00000448105_chr17_46937676_+_158aa MELAAGSFSEEQFWEACAELQQPALAGADWQLLVETSGISIYRLLDKLLKRENSRLLSYMGLDFNSLPYQVPTSDEGGARQNPGLAYGNP >In-frame_PCTP_ENST00000268896_chr17_53828605_+_CALCOCO2_ENST00000416445_chr17_46937676_+_158aa MELAAGSFSEEQFWEACAELQQPALAGADWQLLVETSGISIYRLLDKLLKRENSRLLSYMGLDFNSLPYQVPTSDEGGARQNPGLAYGNP >In-frame_PCTP_ENST00000268896_chr17_53828605_+_CALCOCO2_ENST00000508679_chr17_46937676_+_158aa MELAAGSFSEEQFWEACAELQQPALAGADWQLLVETSGISIYRLLDKLLKRENSRLLSYMGLDFNSLPYQVPTSDEGGARQNPGLAYGNP >In-frame_PCTP_ENST00000576183_chr17_53828605_+_CALCOCO2_ENST00000258947_chr17_46937676_+_158aa MELAAGSFSEEQFWEACAELQQPALAGADWQLLVETSGISIYRLLDKLLKRENSRLLSYMGLDFNSLPYQVPTSDEGGARQNPGLAYGNP >In-frame_PCTP_ENST00000576183_chr17_53828605_+_CALCOCO2_ENST00000509507_chr17_46937676_+_158aa MELAAGSFSEEQFWEACAELQQPALAGADWQLLVETSGISIYRLLDKLLKRENSRLLSYMGLDFNSLPYQVPTSDEGGARQNPGLAYGNP >In-frame_PCTP_ENST00000576183_chr17_53828605_+_CALCOCO2_ENST00000448105_chr17_46937676_+_158aa MELAAGSFSEEQFWEACAELQQPALAGADWQLLVETSGISIYRLLDKLLKRENSRLLSYMGLDFNSLPYQVPTSDEGGARQNPGLAYGNP >In-frame_PCTP_ENST00000576183_chr17_53828605_+_CALCOCO2_ENST00000416445_chr17_46937676_+_158aa MELAAGSFSEEQFWEACAELQQPALAGADWQLLVETSGISIYRLLDKLLKRENSRLLSYMGLDFNSLPYQVPTSDEGGARQNPGLAYGNP >In-frame_PCTP_ENST00000576183_chr17_53828605_+_CALCOCO2_ENST00000508679_chr17_46937676_+_158aa MELAAGSFSEEQFWEACAELQQPALAGADWQLLVETSGISIYRLLDKLLKRENSRLLSYMGLDFNSLPYQVPTSDEGGARQNPGLAYGNP |
| * Fusion transcript sequences (only coding sequence (CDS) region). |
| >In-frame_PCTP_ENST00000573500_chr17_53828605_+_CALCOCO2_ENST00000258947_chr17_46937676_+_474nt ATGGAGCTGGCCGCCGGAAGCTTCTCGGAGGAGCAGTTCTGGGAGGCCTGCGCCGAGCTCCAGCAGCCCGCTCTGGCCGGGGCCGACTGG CAGCTCCTAGTGGAGACCTCGGGCATCAGCATCTACCGGCTGCTGGACAAGCTTTTGAAGAGGGAGAACAGCAGATTGCTCAGTTACATG GGTCTGGATTTTAATTCTTTGCCGTATCAAGTACCTACTTCAGATGAAGGAGGCGCAAGACAAAATCCAGGACTTGCCTATGGAAACCCA TATTCTGGTATCCAAGAAAGTTCTTCCCCCAGCCCGCTCTCCATCAAGAAATGCCCTATCTGCAAAGCAGATGATATTTGTGATCACACC TTGGAGCAACAGCAGATGCAGCCCCTTTGTTTCAATTGTCCAATTTGTGACAAGATCTTCCCAGCTACAGAGAAGCAGATCTTTGAAGAC >In-frame_PCTP_ENST00000573500_chr17_53828605_+_CALCOCO2_ENST00000509507_chr17_46937676_+_474nt ATGGAGCTGGCCGCCGGAAGCTTCTCGGAGGAGCAGTTCTGGGAGGCCTGCGCCGAGCTCCAGCAGCCCGCTCTGGCCGGGGCCGACTGG CAGCTCCTAGTGGAGACCTCGGGCATCAGCATCTACCGGCTGCTGGACAAGCTTTTGAAGAGGGAGAACAGCAGATTGCTCAGTTACATG GGTCTGGATTTTAATTCTTTGCCGTATCAAGTACCTACTTCAGATGAAGGAGGCGCAAGACAAAATCCAGGACTTGCCTATGGAAACCCA TATTCTGGTATCCAAGAAAGTTCTTCCCCCAGCCCGCTCTCCATCAAGAAATGCCCTATCTGCAAAGCAGATGATATTTGTGATCACACC TTGGAGCAACAGCAGATGCAGCCCCTTTGTTTCAATTGTCCAATTTGTGACAAGATCTTCCCAGCTACAGAGAAGCAGATCTTTGAAGAC >In-frame_PCTP_ENST00000573500_chr17_53828605_+_CALCOCO2_ENST00000448105_chr17_46937676_+_474nt ATGGAGCTGGCCGCCGGAAGCTTCTCGGAGGAGCAGTTCTGGGAGGCCTGCGCCGAGCTCCAGCAGCCCGCTCTGGCCGGGGCCGACTGG CAGCTCCTAGTGGAGACCTCGGGCATCAGCATCTACCGGCTGCTGGACAAGCTTTTGAAGAGGGAGAACAGCAGATTGCTCAGTTACATG GGTCTGGATTTTAATTCTTTGCCGTATCAAGTACCTACTTCAGATGAAGGAGGCGCAAGACAAAATCCAGGACTTGCCTATGGAAACCCA TATTCTGGTATCCAAGAAAGTTCTTCCCCCAGCCCGCTCTCCATCAAGAAATGCCCTATCTGCAAAGCAGATGATATTTGTGATCACACC TTGGAGCAACAGCAGATGCAGCCCCTTTGTTTCAATTGTCCAATTTGTGACAAGATCTTCCCAGCTACAGAGAAGCAGATCTTTGAAGAC >In-frame_PCTP_ENST00000573500_chr17_53828605_+_CALCOCO2_ENST00000416445_chr17_46937676_+_474nt ATGGAGCTGGCCGCCGGAAGCTTCTCGGAGGAGCAGTTCTGGGAGGCCTGCGCCGAGCTCCAGCAGCCCGCTCTGGCCGGGGCCGACTGG CAGCTCCTAGTGGAGACCTCGGGCATCAGCATCTACCGGCTGCTGGACAAGCTTTTGAAGAGGGAGAACAGCAGATTGCTCAGTTACATG GGTCTGGATTTTAATTCTTTGCCGTATCAAGTACCTACTTCAGATGAAGGAGGCGCAAGACAAAATCCAGGACTTGCCTATGGAAACCCA TATTCTGGTATCCAAGAAAGTTCTTCCCCCAGCCCGCTCTCCATCAAGAAATGCCCTATCTGCAAAGCAGATGATATTTGTGATCACACC TTGGAGCAACAGCAGATGCAGCCCCTTTGTTTCAATTGTCCAATTTGTGACAAGATCTTCCCAGCTACAGAGAAGCAGATCTTTGAAGAC >In-frame_PCTP_ENST00000573500_chr17_53828605_+_CALCOCO2_ENST00000508679_chr17_46937676_+_474nt ATGGAGCTGGCCGCCGGAAGCTTCTCGGAGGAGCAGTTCTGGGAGGCCTGCGCCGAGCTCCAGCAGCCCGCTCTGGCCGGGGCCGACTGG CAGCTCCTAGTGGAGACCTCGGGCATCAGCATCTACCGGCTGCTGGACAAGCTTTTGAAGAGGGAGAACAGCAGATTGCTCAGTTACATG GGTCTGGATTTTAATTCTTTGCCGTATCAAGTACCTACTTCAGATGAAGGAGGCGCAAGACAAAATCCAGGACTTGCCTATGGAAACCCA TATTCTGGTATCCAAGAAAGTTCTTCCCCCAGCCCGCTCTCCATCAAGAAATGCCCTATCTGCAAAGCAGATGATATTTGTGATCACACC TTGGAGCAACAGCAGATGCAGCCCCTTTGTTTCAATTGTCCAATTTGTGACAAGATCTTCCCAGCTACAGAGAAGCAGATCTTTGAAGAC >In-frame_PCTP_ENST00000268896_chr17_53828605_+_CALCOCO2_ENST00000258947_chr17_46937676_+_474nt ATGGAGCTGGCCGCCGGAAGCTTCTCGGAGGAGCAGTTCTGGGAGGCCTGCGCCGAGCTCCAGCAGCCCGCTCTGGCCGGGGCCGACTGG CAGCTCCTAGTGGAGACCTCGGGCATCAGCATCTACCGGCTGCTGGACAAGCTTTTGAAGAGGGAGAACAGCAGATTGCTCAGTTACATG GGTCTGGATTTTAATTCTTTGCCGTATCAAGTACCTACTTCAGATGAAGGAGGCGCAAGACAAAATCCAGGACTTGCCTATGGAAACCCA TATTCTGGTATCCAAGAAAGTTCTTCCCCCAGCCCGCTCTCCATCAAGAAATGCCCTATCTGCAAAGCAGATGATATTTGTGATCACACC TTGGAGCAACAGCAGATGCAGCCCCTTTGTTTCAATTGTCCAATTTGTGACAAGATCTTCCCAGCTACAGAGAAGCAGATCTTTGAAGAC >In-frame_PCTP_ENST00000268896_chr17_53828605_+_CALCOCO2_ENST00000509507_chr17_46937676_+_474nt ATGGAGCTGGCCGCCGGAAGCTTCTCGGAGGAGCAGTTCTGGGAGGCCTGCGCCGAGCTCCAGCAGCCCGCTCTGGCCGGGGCCGACTGG CAGCTCCTAGTGGAGACCTCGGGCATCAGCATCTACCGGCTGCTGGACAAGCTTTTGAAGAGGGAGAACAGCAGATTGCTCAGTTACATG GGTCTGGATTTTAATTCTTTGCCGTATCAAGTACCTACTTCAGATGAAGGAGGCGCAAGACAAAATCCAGGACTTGCCTATGGAAACCCA TATTCTGGTATCCAAGAAAGTTCTTCCCCCAGCCCGCTCTCCATCAAGAAATGCCCTATCTGCAAAGCAGATGATATTTGTGATCACACC TTGGAGCAACAGCAGATGCAGCCCCTTTGTTTCAATTGTCCAATTTGTGACAAGATCTTCCCAGCTACAGAGAAGCAGATCTTTGAAGAC >In-frame_PCTP_ENST00000268896_chr17_53828605_+_CALCOCO2_ENST00000448105_chr17_46937676_+_474nt ATGGAGCTGGCCGCCGGAAGCTTCTCGGAGGAGCAGTTCTGGGAGGCCTGCGCCGAGCTCCAGCAGCCCGCTCTGGCCGGGGCCGACTGG CAGCTCCTAGTGGAGACCTCGGGCATCAGCATCTACCGGCTGCTGGACAAGCTTTTGAAGAGGGAGAACAGCAGATTGCTCAGTTACATG GGTCTGGATTTTAATTCTTTGCCGTATCAAGTACCTACTTCAGATGAAGGAGGCGCAAGACAAAATCCAGGACTTGCCTATGGAAACCCA TATTCTGGTATCCAAGAAAGTTCTTCCCCCAGCCCGCTCTCCATCAAGAAATGCCCTATCTGCAAAGCAGATGATATTTGTGATCACACC TTGGAGCAACAGCAGATGCAGCCCCTTTGTTTCAATTGTCCAATTTGTGACAAGATCTTCCCAGCTACAGAGAAGCAGATCTTTGAAGAC >In-frame_PCTP_ENST00000268896_chr17_53828605_+_CALCOCO2_ENST00000416445_chr17_46937676_+_474nt ATGGAGCTGGCCGCCGGAAGCTTCTCGGAGGAGCAGTTCTGGGAGGCCTGCGCCGAGCTCCAGCAGCCCGCTCTGGCCGGGGCCGACTGG CAGCTCCTAGTGGAGACCTCGGGCATCAGCATCTACCGGCTGCTGGACAAGCTTTTGAAGAGGGAGAACAGCAGATTGCTCAGTTACATG GGTCTGGATTTTAATTCTTTGCCGTATCAAGTACCTACTTCAGATGAAGGAGGCGCAAGACAAAATCCAGGACTTGCCTATGGAAACCCA TATTCTGGTATCCAAGAAAGTTCTTCCCCCAGCCCGCTCTCCATCAAGAAATGCCCTATCTGCAAAGCAGATGATATTTGTGATCACACC TTGGAGCAACAGCAGATGCAGCCCCTTTGTTTCAATTGTCCAATTTGTGACAAGATCTTCCCAGCTACAGAGAAGCAGATCTTTGAAGAC >In-frame_PCTP_ENST00000268896_chr17_53828605_+_CALCOCO2_ENST00000508679_chr17_46937676_+_474nt ATGGAGCTGGCCGCCGGAAGCTTCTCGGAGGAGCAGTTCTGGGAGGCCTGCGCCGAGCTCCAGCAGCCCGCTCTGGCCGGGGCCGACTGG CAGCTCCTAGTGGAGACCTCGGGCATCAGCATCTACCGGCTGCTGGACAAGCTTTTGAAGAGGGAGAACAGCAGATTGCTCAGTTACATG GGTCTGGATTTTAATTCTTTGCCGTATCAAGTACCTACTTCAGATGAAGGAGGCGCAAGACAAAATCCAGGACTTGCCTATGGAAACCCA TATTCTGGTATCCAAGAAAGTTCTTCCCCCAGCCCGCTCTCCATCAAGAAATGCCCTATCTGCAAAGCAGATGATATTTGTGATCACACC TTGGAGCAACAGCAGATGCAGCCCCTTTGTTTCAATTGTCCAATTTGTGACAAGATCTTCCCAGCTACAGAGAAGCAGATCTTTGAAGAC >In-frame_PCTP_ENST00000576183_chr17_53828605_+_CALCOCO2_ENST00000258947_chr17_46937676_+_474nt ATGGAGCTGGCCGCCGGAAGCTTCTCGGAGGAGCAGTTCTGGGAGGCCTGCGCCGAGCTCCAGCAGCCCGCTCTGGCCGGGGCCGACTGG CAGCTCCTAGTGGAGACCTCGGGCATCAGCATCTACCGGCTGCTGGACAAGCTTTTGAAGAGGGAGAACAGCAGATTGCTCAGTTACATG GGTCTGGATTTTAATTCTTTGCCGTATCAAGTACCTACTTCAGATGAAGGAGGCGCAAGACAAAATCCAGGACTTGCCTATGGAAACCCA TATTCTGGTATCCAAGAAAGTTCTTCCCCCAGCCCGCTCTCCATCAAGAAATGCCCTATCTGCAAAGCAGATGATATTTGTGATCACACC TTGGAGCAACAGCAGATGCAGCCCCTTTGTTTCAATTGTCCAATTTGTGACAAGATCTTCCCAGCTACAGAGAAGCAGATCTTTGAAGAC >In-frame_PCTP_ENST00000576183_chr17_53828605_+_CALCOCO2_ENST00000509507_chr17_46937676_+_474nt ATGGAGCTGGCCGCCGGAAGCTTCTCGGAGGAGCAGTTCTGGGAGGCCTGCGCCGAGCTCCAGCAGCCCGCTCTGGCCGGGGCCGACTGG CAGCTCCTAGTGGAGACCTCGGGCATCAGCATCTACCGGCTGCTGGACAAGCTTTTGAAGAGGGAGAACAGCAGATTGCTCAGTTACATG GGTCTGGATTTTAATTCTTTGCCGTATCAAGTACCTACTTCAGATGAAGGAGGCGCAAGACAAAATCCAGGACTTGCCTATGGAAACCCA TATTCTGGTATCCAAGAAAGTTCTTCCCCCAGCCCGCTCTCCATCAAGAAATGCCCTATCTGCAAAGCAGATGATATTTGTGATCACACC TTGGAGCAACAGCAGATGCAGCCCCTTTGTTTCAATTGTCCAATTTGTGACAAGATCTTCCCAGCTACAGAGAAGCAGATCTTTGAAGAC >In-frame_PCTP_ENST00000576183_chr17_53828605_+_CALCOCO2_ENST00000448105_chr17_46937676_+_474nt ATGGAGCTGGCCGCCGGAAGCTTCTCGGAGGAGCAGTTCTGGGAGGCCTGCGCCGAGCTCCAGCAGCCCGCTCTGGCCGGGGCCGACTGG CAGCTCCTAGTGGAGACCTCGGGCATCAGCATCTACCGGCTGCTGGACAAGCTTTTGAAGAGGGAGAACAGCAGATTGCTCAGTTACATG GGTCTGGATTTTAATTCTTTGCCGTATCAAGTACCTACTTCAGATGAAGGAGGCGCAAGACAAAATCCAGGACTTGCCTATGGAAACCCA TATTCTGGTATCCAAGAAAGTTCTTCCCCCAGCCCGCTCTCCATCAAGAAATGCCCTATCTGCAAAGCAGATGATATTTGTGATCACACC TTGGAGCAACAGCAGATGCAGCCCCTTTGTTTCAATTGTCCAATTTGTGACAAGATCTTCCCAGCTACAGAGAAGCAGATCTTTGAAGAC >In-frame_PCTP_ENST00000576183_chr17_53828605_+_CALCOCO2_ENST00000416445_chr17_46937676_+_474nt ATGGAGCTGGCCGCCGGAAGCTTCTCGGAGGAGCAGTTCTGGGAGGCCTGCGCCGAGCTCCAGCAGCCCGCTCTGGCCGGGGCCGACTGG CAGCTCCTAGTGGAGACCTCGGGCATCAGCATCTACCGGCTGCTGGACAAGCTTTTGAAGAGGGAGAACAGCAGATTGCTCAGTTACATG GGTCTGGATTTTAATTCTTTGCCGTATCAAGTACCTACTTCAGATGAAGGAGGCGCAAGACAAAATCCAGGACTTGCCTATGGAAACCCA TATTCTGGTATCCAAGAAAGTTCTTCCCCCAGCCCGCTCTCCATCAAGAAATGCCCTATCTGCAAAGCAGATGATATTTGTGATCACACC TTGGAGCAACAGCAGATGCAGCCCCTTTGTTTCAATTGTCCAATTTGTGACAAGATCTTCCCAGCTACAGAGAAGCAGATCTTTGAAGAC >In-frame_PCTP_ENST00000576183_chr17_53828605_+_CALCOCO2_ENST00000508679_chr17_46937676_+_474nt ATGGAGCTGGCCGCCGGAAGCTTCTCGGAGGAGCAGTTCTGGGAGGCCTGCGCCGAGCTCCAGCAGCCCGCTCTGGCCGGGGCCGACTGG CAGCTCCTAGTGGAGACCTCGGGCATCAGCATCTACCGGCTGCTGGACAAGCTTTTGAAGAGGGAGAACAGCAGATTGCTCAGTTACATG GGTCTGGATTTTAATTCTTTGCCGTATCAAGTACCTACTTCAGATGAAGGAGGCGCAAGACAAAATCCAGGACTTGCCTATGGAAACCCA TATTCTGGTATCCAAGAAAGTTCTTCCCCCAGCCCGCTCTCCATCAAGAAATGCCCTATCTGCAAAGCAGATGATATTTGTGATCACACC TTGGAGCAACAGCAGATGCAGCCCCTTTGTTTCAATTGTCCAATTTGTGACAAGATCTTCCCAGCTACAGAGAAGCAGATCTTTGAAGAC |
| * Fusion transcript sequences (Full-length transcript). |
| >In-frame_PCTP_ENST00000573500_chr17_53828605_+_CALCOCO2_ENST00000258947_chr17_46937676_+_2724nt CTGCGGAAGGATGGAGCTGGCCGCCGGAAGCTTCTCGGAGGAGCAGTTCTGGGAGGCCTGCGCCGAGCTCCAGCAGCCCGCTCTGGCCGG GGCCGACTGGCAGCTCCTAGTGGAGACCTCGGGCATCAGCATCTACCGGCTGCTGGACAAGCTTTTGAAGAGGGAGAACAGCAGATTGCT CAGTTACATGGGTCTGGATTTTAATTCTTTGCCGTATCAAGTACCTACTTCAGATGAAGGAGGCGCAAGACAAAATCCAGGACTTGCCTA TGGAAACCCATATTCTGGTATCCAAGAAAGTTCTTCCCCCAGCCCGCTCTCCATCAAGAAATGCCCTATCTGCAAAGCAGATGATATTTG TGATCACACCTTGGAGCAACAGCAGATGCAGCCCCTTTGTTTCAATTGTCCAATTTGTGACAAGATCTTCCCAGCTACAGAGAAGCAGAT CTTTGAAGACCACGTGTTCTGCCACTCTCTCTGAGTATCCCAACCTCTTGGATGTATACAGAGATTTTATAGAATAGAACCTATAGCTTC TACCATGAGTTATATGAGTCAAGATCCTGCCTAACCTGAAATTATTAGGGATTTACTCAGCCCTGCTGCCGCTAACAGTGGAGTTATGTC ACTGATCTGAAGGTCACTGTTAAGGGCTTCTGCTGCCATCCTTGTGGGTTGCTACCTTTAAGTCGCATAACTCTAGCTGTATCATCCTCT CACCTGTCATTCTTCTGAGGGTCTCAGTACAAGGGCCCTGGGATGGAGCCAACCTGGGTATTCACAACAGGCCTGACTTGATACTAAGTG ATTAGTTTTCCAAGTTGTCCCACTGCCATTCAAAGTCAGCCCTTGAGTGTATTTGTTCTCAGTCCTAACCCTGGGGCCAGAGATTGGTCC GAGGTTGAGAATTCCTTCCTCCTCATCCTTGGTGTTGCTTTCTCCAAATGATTGTTTTAGACTAGCCAAAAATGCCGTGGCAAAGAGCTC AGAAATCCAATTTGGATACCAAAGGTTTCTCATGTTAATTTCTCAGCCCCCAAAGAAGCATCTTACTCCTGAACCTTAGACAGGAAGTAT TGTTTCAGTCACAGAAAGCTTTTCTGGGTACCTCTGGTTAGCACTTTCTACTCTCTGATATTTCCTATGTACATAGCTTTTATTGTTGTA AATCCTTTCTTAATGGTTAAATAGGATTGTTAGCAACTATGGGTTTGCAGTTTTCTGAGTAGGTGAGTTTTGAATATGGGTAAATCAGAA TAATGAGACAACTTGTTAATCTCTTTAATACTAAAAATAAATTACTCTTCTATTTCAGGGACTTAGGTAATTTAAAATAAACCTTCAATT TATGGTCTTCTGTTTTGAAGCTCATGGGAAAATTGTGATCAAAAGGGCTATGGGAAGGGCAGACCCCGCCAATGATTTCTCTTCACCTGT CTTAAGATTAAATAAAAAAGAGTGTCCTGGCAGTTATCTTGAGGTGGGGAAGGAGGTGATGAAACATTAGTTTGTGAAATCCAAGGCCCT GGCTTGCTTTCTTTCTTTTTTTTTTTTTTTTTTTGAAACAGTCTCTCTCTGTCACCCAGGCTGGCGTGCAATGGCGCAGTTGACTCACTA CAGCCTCTGCCTCCCAGGTTCAAGCGATTCTCATGCCTTAGCCTCCCAAGTAGCTGGGATTACAGGTGTGTGCCGCAATGCCCAGCTAAT TTTTGTGTTTTTAGTAGAGACAGGGTTTCACTATGTTGGCCAGGCTGGTCTCGAACTCCTGGCCTCACGTGATCTGTCCACTTCAGCCGT CCAAAGTGCTGGGATTACAAGCGTGAGCCACTGTGCTGGGCCCGAGGCCCTGACTTCTTGCTGTAACTTTCCATGCATTTTTTTTAAAAG GAGCAGTGTGGATTTTCGCACCCTTTGTGAACTAAGTTCAATGCGCTCTATCCAAATTTGCCTAATTGAACTATAAGAAAGTAATAATTC CATTTTCTATCCCCTCAGGGACTGAACAAATGGAAATAACTCCCAGGCAGTATCAGGTGGTCACTACAGAGACTTCCACAAAAACTTTTG AATGATGTGAAACACGATGTCATGAATAAGGGTTGAGCCAACTATAGCTCTGTGTTCCTACTGGGCTTTCCCTAATGTGGTTGGGAGTTA TGCCCTAGACTAACTGTATTGTCCTAGTCACAGCTCCTTGCTTTGATTTCATCCTTGATAAAATGAAGATGAAACTTACACTACTTCTCC AAGCCTTTTGCTGTCTTAAGAATAAGACCTGAGATTAACACTAACCCTAGAATAGAAATGTAATAGGGAGATGGTAATAAAGGAGTTTTT CTGGCACATACCCTCCCTACAGAATTTCTGTTGCTCCCCAGATCCAGTGAAGAATTGCAGTTTCATTTATTTTGTACCAGTCAGCTCTTA ATTAAGTACATGAATGGAGAGGAACAGTGGTGCACATAATCCAAATCAGTGAATACCATTTTCTGGTGAATTACCCACCCCTTTGCCCCT GCTACCCCGAGGGTTACCATGATTGTCAACAGCAGCAGGAGCCCTTCCACAGGGCTTGGTAAAAAAACCAGTTGAGGTGTTAATGACCCT TTTTGCTGGGTGTAAAACAAAGCATCTTTAACCACTGTTCATTATCCCCAGCTGCTCTTACCAAGGCTTTGAAGGGGGAAATTATGCTCT >In-frame_PCTP_ENST00000573500_chr17_53828605_+_CALCOCO2_ENST00000509507_chr17_46937676_+_529nt CTGCGGAAGGATGGAGCTGGCCGCCGGAAGCTTCTCGGAGGAGCAGTTCTGGGAGGCCTGCGCCGAGCTCCAGCAGCCCGCTCTGGCCGG GGCCGACTGGCAGCTCCTAGTGGAGACCTCGGGCATCAGCATCTACCGGCTGCTGGACAAGCTTTTGAAGAGGGAGAACAGCAGATTGCT CAGTTACATGGGTCTGGATTTTAATTCTTTGCCGTATCAAGTACCTACTTCAGATGAAGGAGGCGCAAGACAAAATCCAGGACTTGCCTA TGGAAACCCATATTCTGGTATCCAAGAAAGTTCTTCCCCCAGCCCGCTCTCCATCAAGAAATGCCCTATCTGCAAAGCAGATGATATTTG TGATCACACCTTGGAGCAACAGCAGATGCAGCCCCTTTGTTTCAATTGTCCAATTTGTGACAAGATCTTCCCAGCTACAGAGAAGCAGAT >In-frame_PCTP_ENST00000573500_chr17_53828605_+_CALCOCO2_ENST00000448105_chr17_46937676_+_932nt CTGCGGAAGGATGGAGCTGGCCGCCGGAAGCTTCTCGGAGGAGCAGTTCTGGGAGGCCTGCGCCGAGCTCCAGCAGCCCGCTCTGGCCGG GGCCGACTGGCAGCTCCTAGTGGAGACCTCGGGCATCAGCATCTACCGGCTGCTGGACAAGCTTTTGAAGAGGGAGAACAGCAGATTGCT CAGTTACATGGGTCTGGATTTTAATTCTTTGCCGTATCAAGTACCTACTTCAGATGAAGGAGGCGCAAGACAAAATCCAGGACTTGCCTA TGGAAACCCATATTCTGGTATCCAAGAAAGTTCTTCCCCCAGCCCGCTCTCCATCAAGAAATGCCCTATCTGCAAAGCAGATGATATTTG TGATCACACCTTGGAGCAACAGCAGATGCAGCCCCTTTGTTTCAATTGTCCAATTTGTGACAAGATCTTCCCAGCTACAGAGAAGCAGAT CTTTGAAGACCACGTGTTCTGCCACTCTCTCTGAGTATCCCAACCTCTTGGATGTATACAGAGATTTTATAGAATAGAACCTATAGCTTC TACCATGAGTTATATGAGTCAAGATCCTGCCTAACCTGAAATTATTAGGGATTTACTCAGCCCTGCTGCCGCTAACAGTGGAGTTATGTC ACTGATCTGAAGGTCACTGTTAAGGGCTTCTGCTGCCATCCTTGTGGGTTGCTACCTTTAAGTCGCATAACTCTAGCTGTATCATCCTCT CACCTGTCATTCTTCTGAGGGTCTCAGTACAAGGGCCCTGGGATGGAGCCAACCTGGGTATTCACAACAGGCCTGACTTGATACTAAGTG ATTAGTTTTCCAAGTTGTCCCACTGCCATTCAAAGTCAGCCCTTGAGTGTATTTGTTCTCAGTCCTAACCCTGGGGCCAGAGATTGGTCC >In-frame_PCTP_ENST00000573500_chr17_53828605_+_CALCOCO2_ENST00000416445_chr17_46937676_+_653nt CTGCGGAAGGATGGAGCTGGCCGCCGGAAGCTTCTCGGAGGAGCAGTTCTGGGAGGCCTGCGCCGAGCTCCAGCAGCCCGCTCTGGCCGG GGCCGACTGGCAGCTCCTAGTGGAGACCTCGGGCATCAGCATCTACCGGCTGCTGGACAAGCTTTTGAAGAGGGAGAACAGCAGATTGCT CAGTTACATGGGTCTGGATTTTAATTCTTTGCCGTATCAAGTACCTACTTCAGATGAAGGAGGCGCAAGACAAAATCCAGGACTTGCCTA TGGAAACCCATATTCTGGTATCCAAGAAAGTTCTTCCCCCAGCCCGCTCTCCATCAAGAAATGCCCTATCTGCAAAGCAGATGATATTTG TGATCACACCTTGGAGCAACAGCAGATGCAGCCCCTTTGTTTCAATTGTCCAATTTGTGACAAGATCTTCCCAGCTACAGAGAAGCAGAT CTTTGAAGACCACGTGTTCTGCCACTCTCTCTGAGTATCCCAACCTCTTGGATGTATACAGAGATTTTATAGAATAGAACCTATAGCTTC TACCATGAGTTATATGAGTCAAGATCCTGCCTAACCTGAAATTATTAGGGATTTACTCAGCCCTGCTGCCGCTAACAGTGGAGTTATGTC >In-frame_PCTP_ENST00000573500_chr17_53828605_+_CALCOCO2_ENST00000508679_chr17_46937676_+_675nt CTGCGGAAGGATGGAGCTGGCCGCCGGAAGCTTCTCGGAGGAGCAGTTCTGGGAGGCCTGCGCCGAGCTCCAGCAGCCCGCTCTGGCCGG GGCCGACTGGCAGCTCCTAGTGGAGACCTCGGGCATCAGCATCTACCGGCTGCTGGACAAGCTTTTGAAGAGGGAGAACAGCAGATTGCT CAGTTACATGGGTCTGGATTTTAATTCTTTGCCGTATCAAGTACCTACTTCAGATGAAGGAGGCGCAAGACAAAATCCAGGACTTGCCTA TGGAAACCCATATTCTGGTATCCAAGAAAGTTCTTCCCCCAGCCCGCTCTCCATCAAGAAATGCCCTATCTGCAAAGCAGATGATATTTG TGATCACACCTTGGAGCAACAGCAGATGCAGCCCCTTTGTTTCAATTGTCCAATTTGTGACAAGATCTTCCCAGCTACAGAGAAGCAGAT CTTTGAAGACCACGTGTTCTGCCACTCTCTCTGAGTATCCCAACCTCTTGGATGTATACAGAGATTTTATAGAATAGAACCTATAGCTTC TACCATGAGTTATATGAGTCAAGATCCTGCCTAACCTGAAATTATTAGGGATTTACTCAGCCCTGCTGCCGCTAACAGTGGAGTTATGTC >In-frame_PCTP_ENST00000268896_chr17_53828605_+_CALCOCO2_ENST00000258947_chr17_46937676_+_2839nt AGTTTCCTGCCAATGACGCTGGGGCAGCCGGGGCAGCCGGGGCAGCCCGGTCACCCCGCCCCCAGGCCCACACTAAGGGTGTCCGCGGCC TGCCCTCCAGGCGGAGGAGCCCGGACTGCGGAAGGATGGAGCTGGCCGCCGGAAGCTTCTCGGAGGAGCAGTTCTGGGAGGCCTGCGCCG AGCTCCAGCAGCCCGCTCTGGCCGGGGCCGACTGGCAGCTCCTAGTGGAGACCTCGGGCATCAGCATCTACCGGCTGCTGGACAAGCTTT TGAAGAGGGAGAACAGCAGATTGCTCAGTTACATGGGTCTGGATTTTAATTCTTTGCCGTATCAAGTACCTACTTCAGATGAAGGAGGCG CAAGACAAAATCCAGGACTTGCCTATGGAAACCCATATTCTGGTATCCAAGAAAGTTCTTCCCCCAGCCCGCTCTCCATCAAGAAATGCC CTATCTGCAAAGCAGATGATATTTGTGATCACACCTTGGAGCAACAGCAGATGCAGCCCCTTTGTTTCAATTGTCCAATTTGTGACAAGA TCTTCCCAGCTACAGAGAAGCAGATCTTTGAAGACCACGTGTTCTGCCACTCTCTCTGAGTATCCCAACCTCTTGGATGTATACAGAGAT TTTATAGAATAGAACCTATAGCTTCTACCATGAGTTATATGAGTCAAGATCCTGCCTAACCTGAAATTATTAGGGATTTACTCAGCCCTG CTGCCGCTAACAGTGGAGTTATGTCACTGATCTGAAGGTCACTGTTAAGGGCTTCTGCTGCCATCCTTGTGGGTTGCTACCTTTAAGTCG CATAACTCTAGCTGTATCATCCTCTCACCTGTCATTCTTCTGAGGGTCTCAGTACAAGGGCCCTGGGATGGAGCCAACCTGGGTATTCAC AACAGGCCTGACTTGATACTAAGTGATTAGTTTTCCAAGTTGTCCCACTGCCATTCAAAGTCAGCCCTTGAGTGTATTTGTTCTCAGTCC TAACCCTGGGGCCAGAGATTGGTCCGAGGTTGAGAATTCCTTCCTCCTCATCCTTGGTGTTGCTTTCTCCAAATGATTGTTTTAGACTAG CCAAAAATGCCGTGGCAAAGAGCTCAGAAATCCAATTTGGATACCAAAGGTTTCTCATGTTAATTTCTCAGCCCCCAAAGAAGCATCTTA CTCCTGAACCTTAGACAGGAAGTATTGTTTCAGTCACAGAAAGCTTTTCTGGGTACCTCTGGTTAGCACTTTCTACTCTCTGATATTTCC TATGTACATAGCTTTTATTGTTGTAAATCCTTTCTTAATGGTTAAATAGGATTGTTAGCAACTATGGGTTTGCAGTTTTCTGAGTAGGTG AGTTTTGAATATGGGTAAATCAGAATAATGAGACAACTTGTTAATCTCTTTAATACTAAAAATAAATTACTCTTCTATTTCAGGGACTTA GGTAATTTAAAATAAACCTTCAATTTATGGTCTTCTGTTTTGAAGCTCATGGGAAAATTGTGATCAAAAGGGCTATGGGAAGGGCAGACC CCGCCAATGATTTCTCTTCACCTGTCTTAAGATTAAATAAAAAAGAGTGTCCTGGCAGTTATCTTGAGGTGGGGAAGGAGGTGATGAAAC ATTAGTTTGTGAAATCCAAGGCCCTGGCTTGCTTTCTTTCTTTTTTTTTTTTTTTTTTTGAAACAGTCTCTCTCTGTCACCCAGGCTGGC GTGCAATGGCGCAGTTGACTCACTACAGCCTCTGCCTCCCAGGTTCAAGCGATTCTCATGCCTTAGCCTCCCAAGTAGCTGGGATTACAG GTGTGTGCCGCAATGCCCAGCTAATTTTTGTGTTTTTAGTAGAGACAGGGTTTCACTATGTTGGCCAGGCTGGTCTCGAACTCCTGGCCT CACGTGATCTGTCCACTTCAGCCGTCCAAAGTGCTGGGATTACAAGCGTGAGCCACTGTGCTGGGCCCGAGGCCCTGACTTCTTGCTGTA ACTTTCCATGCATTTTTTTTAAAAGGAGCAGTGTGGATTTTCGCACCCTTTGTGAACTAAGTTCAATGCGCTCTATCCAAATTTGCCTAA TTGAACTATAAGAAAGTAATAATTCCATTTTCTATCCCCTCAGGGACTGAACAAATGGAAATAACTCCCAGGCAGTATCAGGTGGTCACT ACAGAGACTTCCACAAAAACTTTTGAATGATGTGAAACACGATGTCATGAATAAGGGTTGAGCCAACTATAGCTCTGTGTTCCTACTGGG CTTTCCCTAATGTGGTTGGGAGTTATGCCCTAGACTAACTGTATTGTCCTAGTCACAGCTCCTTGCTTTGATTTCATCCTTGATAAAATG AAGATGAAACTTACACTACTTCTCCAAGCCTTTTGCTGTCTTAAGAATAAGACCTGAGATTAACACTAACCCTAGAATAGAAATGTAATA GGGAGATGGTAATAAAGGAGTTTTTCTGGCACATACCCTCCCTACAGAATTTCTGTTGCTCCCCAGATCCAGTGAAGAATTGCAGTTTCA TTTATTTTGTACCAGTCAGCTCTTAATTAAGTACATGAATGGAGAGGAACAGTGGTGCACATAATCCAAATCAGTGAATACCATTTTCTG GTGAATTACCCACCCCTTTGCCCCTGCTACCCCGAGGGTTACCATGATTGTCAACAGCAGCAGGAGCCCTTCCACAGGGCTTGGTAAAAA AACCAGTTGAGGTGTTAATGACCCTTTTTGCTGGGTGTAAAACAAAGCATCTTTAACCACTGTTCATTATCCCCAGCTGCTCTTACCAAG >In-frame_PCTP_ENST00000268896_chr17_53828605_+_CALCOCO2_ENST00000509507_chr17_46937676_+_644nt AGTTTCCTGCCAATGACGCTGGGGCAGCCGGGGCAGCCGGGGCAGCCCGGTCACCCCGCCCCCAGGCCCACACTAAGGGTGTCCGCGGCC TGCCCTCCAGGCGGAGGAGCCCGGACTGCGGAAGGATGGAGCTGGCCGCCGGAAGCTTCTCGGAGGAGCAGTTCTGGGAGGCCTGCGCCG AGCTCCAGCAGCCCGCTCTGGCCGGGGCCGACTGGCAGCTCCTAGTGGAGACCTCGGGCATCAGCATCTACCGGCTGCTGGACAAGCTTT TGAAGAGGGAGAACAGCAGATTGCTCAGTTACATGGGTCTGGATTTTAATTCTTTGCCGTATCAAGTACCTACTTCAGATGAAGGAGGCG CAAGACAAAATCCAGGACTTGCCTATGGAAACCCATATTCTGGTATCCAAGAAAGTTCTTCCCCCAGCCCGCTCTCCATCAAGAAATGCC CTATCTGCAAAGCAGATGATATTTGTGATCACACCTTGGAGCAACAGCAGATGCAGCCCCTTTGTTTCAATTGTCCAATTTGTGACAAGA TCTTCCCAGCTACAGAGAAGCAGATCTTTGAAGACCACGTGTTCTGCCACTCTCTCTGAGTATCCCAACCTCTTGGATGTATACAGAGAT >In-frame_PCTP_ENST00000268896_chr17_53828605_+_CALCOCO2_ENST00000448105_chr17_46937676_+_1047nt AGTTTCCTGCCAATGACGCTGGGGCAGCCGGGGCAGCCGGGGCAGCCCGGTCACCCCGCCCCCAGGCCCACACTAAGGGTGTCCGCGGCC TGCCCTCCAGGCGGAGGAGCCCGGACTGCGGAAGGATGGAGCTGGCCGCCGGAAGCTTCTCGGAGGAGCAGTTCTGGGAGGCCTGCGCCG AGCTCCAGCAGCCCGCTCTGGCCGGGGCCGACTGGCAGCTCCTAGTGGAGACCTCGGGCATCAGCATCTACCGGCTGCTGGACAAGCTTT TGAAGAGGGAGAACAGCAGATTGCTCAGTTACATGGGTCTGGATTTTAATTCTTTGCCGTATCAAGTACCTACTTCAGATGAAGGAGGCG CAAGACAAAATCCAGGACTTGCCTATGGAAACCCATATTCTGGTATCCAAGAAAGTTCTTCCCCCAGCCCGCTCTCCATCAAGAAATGCC CTATCTGCAAAGCAGATGATATTTGTGATCACACCTTGGAGCAACAGCAGATGCAGCCCCTTTGTTTCAATTGTCCAATTTGTGACAAGA TCTTCCCAGCTACAGAGAAGCAGATCTTTGAAGACCACGTGTTCTGCCACTCTCTCTGAGTATCCCAACCTCTTGGATGTATACAGAGAT TTTATAGAATAGAACCTATAGCTTCTACCATGAGTTATATGAGTCAAGATCCTGCCTAACCTGAAATTATTAGGGATTTACTCAGCCCTG CTGCCGCTAACAGTGGAGTTATGTCACTGATCTGAAGGTCACTGTTAAGGGCTTCTGCTGCCATCCTTGTGGGTTGCTACCTTTAAGTCG CATAACTCTAGCTGTATCATCCTCTCACCTGTCATTCTTCTGAGGGTCTCAGTACAAGGGCCCTGGGATGGAGCCAACCTGGGTATTCAC AACAGGCCTGACTTGATACTAAGTGATTAGTTTTCCAAGTTGTCCCACTGCCATTCAAAGTCAGCCCTTGAGTGTATTTGTTCTCAGTCC >In-frame_PCTP_ENST00000268896_chr17_53828605_+_CALCOCO2_ENST00000416445_chr17_46937676_+_768nt AGTTTCCTGCCAATGACGCTGGGGCAGCCGGGGCAGCCGGGGCAGCCCGGTCACCCCGCCCCCAGGCCCACACTAAGGGTGTCCGCGGCC TGCCCTCCAGGCGGAGGAGCCCGGACTGCGGAAGGATGGAGCTGGCCGCCGGAAGCTTCTCGGAGGAGCAGTTCTGGGAGGCCTGCGCCG AGCTCCAGCAGCCCGCTCTGGCCGGGGCCGACTGGCAGCTCCTAGTGGAGACCTCGGGCATCAGCATCTACCGGCTGCTGGACAAGCTTT TGAAGAGGGAGAACAGCAGATTGCTCAGTTACATGGGTCTGGATTTTAATTCTTTGCCGTATCAAGTACCTACTTCAGATGAAGGAGGCG CAAGACAAAATCCAGGACTTGCCTATGGAAACCCATATTCTGGTATCCAAGAAAGTTCTTCCCCCAGCCCGCTCTCCATCAAGAAATGCC CTATCTGCAAAGCAGATGATATTTGTGATCACACCTTGGAGCAACAGCAGATGCAGCCCCTTTGTTTCAATTGTCCAATTTGTGACAAGA TCTTCCCAGCTACAGAGAAGCAGATCTTTGAAGACCACGTGTTCTGCCACTCTCTCTGAGTATCCCAACCTCTTGGATGTATACAGAGAT TTTATAGAATAGAACCTATAGCTTCTACCATGAGTTATATGAGTCAAGATCCTGCCTAACCTGAAATTATTAGGGATTTACTCAGCCCTG >In-frame_PCTP_ENST00000268896_chr17_53828605_+_CALCOCO2_ENST00000508679_chr17_46937676_+_790nt AGTTTCCTGCCAATGACGCTGGGGCAGCCGGGGCAGCCGGGGCAGCCCGGTCACCCCGCCCCCAGGCCCACACTAAGGGTGTCCGCGGCC TGCCCTCCAGGCGGAGGAGCCCGGACTGCGGAAGGATGGAGCTGGCCGCCGGAAGCTTCTCGGAGGAGCAGTTCTGGGAGGCCTGCGCCG AGCTCCAGCAGCCCGCTCTGGCCGGGGCCGACTGGCAGCTCCTAGTGGAGACCTCGGGCATCAGCATCTACCGGCTGCTGGACAAGCTTT TGAAGAGGGAGAACAGCAGATTGCTCAGTTACATGGGTCTGGATTTTAATTCTTTGCCGTATCAAGTACCTACTTCAGATGAAGGAGGCG CAAGACAAAATCCAGGACTTGCCTATGGAAACCCATATTCTGGTATCCAAGAAAGTTCTTCCCCCAGCCCGCTCTCCATCAAGAAATGCC CTATCTGCAAAGCAGATGATATTTGTGATCACACCTTGGAGCAACAGCAGATGCAGCCCCTTTGTTTCAATTGTCCAATTTGTGACAAGA TCTTCCCAGCTACAGAGAAGCAGATCTTTGAAGACCACGTGTTCTGCCACTCTCTCTGAGTATCCCAACCTCTTGGATGTATACAGAGAT TTTATAGAATAGAACCTATAGCTTCTACCATGAGTTATATGAGTCAAGATCCTGCCTAACCTGAAATTATTAGGGATTTACTCAGCCCTG >In-frame_PCTP_ENST00000576183_chr17_53828605_+_CALCOCO2_ENST00000258947_chr17_46937676_+_2757nt CCGCGGCCTGCCCTCCAGGCGGAGGAGCCCGGACTGCGGAAGGATGGAGCTGGCCGCCGGAAGCTTCTCGGAGGAGCAGTTCTGGGAGGC CTGCGCCGAGCTCCAGCAGCCCGCTCTGGCCGGGGCCGACTGGCAGCTCCTAGTGGAGACCTCGGGCATCAGCATCTACCGGCTGCTGGA CAAGCTTTTGAAGAGGGAGAACAGCAGATTGCTCAGTTACATGGGTCTGGATTTTAATTCTTTGCCGTATCAAGTACCTACTTCAGATGA AGGAGGCGCAAGACAAAATCCAGGACTTGCCTATGGAAACCCATATTCTGGTATCCAAGAAAGTTCTTCCCCCAGCCCGCTCTCCATCAA GAAATGCCCTATCTGCAAAGCAGATGATATTTGTGATCACACCTTGGAGCAACAGCAGATGCAGCCCCTTTGTTTCAATTGTCCAATTTG TGACAAGATCTTCCCAGCTACAGAGAAGCAGATCTTTGAAGACCACGTGTTCTGCCACTCTCTCTGAGTATCCCAACCTCTTGGATGTAT ACAGAGATTTTATAGAATAGAACCTATAGCTTCTACCATGAGTTATATGAGTCAAGATCCTGCCTAACCTGAAATTATTAGGGATTTACT CAGCCCTGCTGCCGCTAACAGTGGAGTTATGTCACTGATCTGAAGGTCACTGTTAAGGGCTTCTGCTGCCATCCTTGTGGGTTGCTACCT TTAAGTCGCATAACTCTAGCTGTATCATCCTCTCACCTGTCATTCTTCTGAGGGTCTCAGTACAAGGGCCCTGGGATGGAGCCAACCTGG GTATTCACAACAGGCCTGACTTGATACTAAGTGATTAGTTTTCCAAGTTGTCCCACTGCCATTCAAAGTCAGCCCTTGAGTGTATTTGTT CTCAGTCCTAACCCTGGGGCCAGAGATTGGTCCGAGGTTGAGAATTCCTTCCTCCTCATCCTTGGTGTTGCTTTCTCCAAATGATTGTTT TAGACTAGCCAAAAATGCCGTGGCAAAGAGCTCAGAAATCCAATTTGGATACCAAAGGTTTCTCATGTTAATTTCTCAGCCCCCAAAGAA GCATCTTACTCCTGAACCTTAGACAGGAAGTATTGTTTCAGTCACAGAAAGCTTTTCTGGGTACCTCTGGTTAGCACTTTCTACTCTCTG ATATTTCCTATGTACATAGCTTTTATTGTTGTAAATCCTTTCTTAATGGTTAAATAGGATTGTTAGCAACTATGGGTTTGCAGTTTTCTG AGTAGGTGAGTTTTGAATATGGGTAAATCAGAATAATGAGACAACTTGTTAATCTCTTTAATACTAAAAATAAATTACTCTTCTATTTCA GGGACTTAGGTAATTTAAAATAAACCTTCAATTTATGGTCTTCTGTTTTGAAGCTCATGGGAAAATTGTGATCAAAAGGGCTATGGGAAG GGCAGACCCCGCCAATGATTTCTCTTCACCTGTCTTAAGATTAAATAAAAAAGAGTGTCCTGGCAGTTATCTTGAGGTGGGGAAGGAGGT GATGAAACATTAGTTTGTGAAATCCAAGGCCCTGGCTTGCTTTCTTTCTTTTTTTTTTTTTTTTTTTGAAACAGTCTCTCTCTGTCACCC AGGCTGGCGTGCAATGGCGCAGTTGACTCACTACAGCCTCTGCCTCCCAGGTTCAAGCGATTCTCATGCCTTAGCCTCCCAAGTAGCTGG GATTACAGGTGTGTGCCGCAATGCCCAGCTAATTTTTGTGTTTTTAGTAGAGACAGGGTTTCACTATGTTGGCCAGGCTGGTCTCGAACT CCTGGCCTCACGTGATCTGTCCACTTCAGCCGTCCAAAGTGCTGGGATTACAAGCGTGAGCCACTGTGCTGGGCCCGAGGCCCTGACTTC TTGCTGTAACTTTCCATGCATTTTTTTTAAAAGGAGCAGTGTGGATTTTCGCACCCTTTGTGAACTAAGTTCAATGCGCTCTATCCAAAT TTGCCTAATTGAACTATAAGAAAGTAATAATTCCATTTTCTATCCCCTCAGGGACTGAACAAATGGAAATAACTCCCAGGCAGTATCAGG TGGTCACTACAGAGACTTCCACAAAAACTTTTGAATGATGTGAAACACGATGTCATGAATAAGGGTTGAGCCAACTATAGCTCTGTGTTC CTACTGGGCTTTCCCTAATGTGGTTGGGAGTTATGCCCTAGACTAACTGTATTGTCCTAGTCACAGCTCCTTGCTTTGATTTCATCCTTG ATAAAATGAAGATGAAACTTACACTACTTCTCCAAGCCTTTTGCTGTCTTAAGAATAAGACCTGAGATTAACACTAACCCTAGAATAGAA ATGTAATAGGGAGATGGTAATAAAGGAGTTTTTCTGGCACATACCCTCCCTACAGAATTTCTGTTGCTCCCCAGATCCAGTGAAGAATTG CAGTTTCATTTATTTTGTACCAGTCAGCTCTTAATTAAGTACATGAATGGAGAGGAACAGTGGTGCACATAATCCAAATCAGTGAATACC ATTTTCTGGTGAATTACCCACCCCTTTGCCCCTGCTACCCCGAGGGTTACCATGATTGTCAACAGCAGCAGGAGCCCTTCCACAGGGCTT GGTAAAAAAACCAGTTGAGGTGTTAATGACCCTTTTTGCTGGGTGTAAAACAAAGCATCTTTAACCACTGTTCATTATCCCCAGCTGCTC >In-frame_PCTP_ENST00000576183_chr17_53828605_+_CALCOCO2_ENST00000509507_chr17_46937676_+_562nt CCGCGGCCTGCCCTCCAGGCGGAGGAGCCCGGACTGCGGAAGGATGGAGCTGGCCGCCGGAAGCTTCTCGGAGGAGCAGTTCTGGGAGGC CTGCGCCGAGCTCCAGCAGCCCGCTCTGGCCGGGGCCGACTGGCAGCTCCTAGTGGAGACCTCGGGCATCAGCATCTACCGGCTGCTGGA CAAGCTTTTGAAGAGGGAGAACAGCAGATTGCTCAGTTACATGGGTCTGGATTTTAATTCTTTGCCGTATCAAGTACCTACTTCAGATGA AGGAGGCGCAAGACAAAATCCAGGACTTGCCTATGGAAACCCATATTCTGGTATCCAAGAAAGTTCTTCCCCCAGCCCGCTCTCCATCAA GAAATGCCCTATCTGCAAAGCAGATGATATTTGTGATCACACCTTGGAGCAACAGCAGATGCAGCCCCTTTGTTTCAATTGTCCAATTTG TGACAAGATCTTCCCAGCTACAGAGAAGCAGATCTTTGAAGACCACGTGTTCTGCCACTCTCTCTGAGTATCCCAACCTCTTGGATGTAT >In-frame_PCTP_ENST00000576183_chr17_53828605_+_CALCOCO2_ENST00000448105_chr17_46937676_+_965nt CCGCGGCCTGCCCTCCAGGCGGAGGAGCCCGGACTGCGGAAGGATGGAGCTGGCCGCCGGAAGCTTCTCGGAGGAGCAGTTCTGGGAGGC CTGCGCCGAGCTCCAGCAGCCCGCTCTGGCCGGGGCCGACTGGCAGCTCCTAGTGGAGACCTCGGGCATCAGCATCTACCGGCTGCTGGA CAAGCTTTTGAAGAGGGAGAACAGCAGATTGCTCAGTTACATGGGTCTGGATTTTAATTCTTTGCCGTATCAAGTACCTACTTCAGATGA AGGAGGCGCAAGACAAAATCCAGGACTTGCCTATGGAAACCCATATTCTGGTATCCAAGAAAGTTCTTCCCCCAGCCCGCTCTCCATCAA GAAATGCCCTATCTGCAAAGCAGATGATATTTGTGATCACACCTTGGAGCAACAGCAGATGCAGCCCCTTTGTTTCAATTGTCCAATTTG TGACAAGATCTTCCCAGCTACAGAGAAGCAGATCTTTGAAGACCACGTGTTCTGCCACTCTCTCTGAGTATCCCAACCTCTTGGATGTAT ACAGAGATTTTATAGAATAGAACCTATAGCTTCTACCATGAGTTATATGAGTCAAGATCCTGCCTAACCTGAAATTATTAGGGATTTACT CAGCCCTGCTGCCGCTAACAGTGGAGTTATGTCACTGATCTGAAGGTCACTGTTAAGGGCTTCTGCTGCCATCCTTGTGGGTTGCTACCT TTAAGTCGCATAACTCTAGCTGTATCATCCTCTCACCTGTCATTCTTCTGAGGGTCTCAGTACAAGGGCCCTGGGATGGAGCCAACCTGG GTATTCACAACAGGCCTGACTTGATACTAAGTGATTAGTTTTCCAAGTTGTCCCACTGCCATTCAAAGTCAGCCCTTGAGTGTATTTGTT >In-frame_PCTP_ENST00000576183_chr17_53828605_+_CALCOCO2_ENST00000416445_chr17_46937676_+_686nt CCGCGGCCTGCCCTCCAGGCGGAGGAGCCCGGACTGCGGAAGGATGGAGCTGGCCGCCGGAAGCTTCTCGGAGGAGCAGTTCTGGGAGGC CTGCGCCGAGCTCCAGCAGCCCGCTCTGGCCGGGGCCGACTGGCAGCTCCTAGTGGAGACCTCGGGCATCAGCATCTACCGGCTGCTGGA CAAGCTTTTGAAGAGGGAGAACAGCAGATTGCTCAGTTACATGGGTCTGGATTTTAATTCTTTGCCGTATCAAGTACCTACTTCAGATGA AGGAGGCGCAAGACAAAATCCAGGACTTGCCTATGGAAACCCATATTCTGGTATCCAAGAAAGTTCTTCCCCCAGCCCGCTCTCCATCAA GAAATGCCCTATCTGCAAAGCAGATGATATTTGTGATCACACCTTGGAGCAACAGCAGATGCAGCCCCTTTGTTTCAATTGTCCAATTTG TGACAAGATCTTCCCAGCTACAGAGAAGCAGATCTTTGAAGACCACGTGTTCTGCCACTCTCTCTGAGTATCCCAACCTCTTGGATGTAT ACAGAGATTTTATAGAATAGAACCTATAGCTTCTACCATGAGTTATATGAGTCAAGATCCTGCCTAACCTGAAATTATTAGGGATTTACT >In-frame_PCTP_ENST00000576183_chr17_53828605_+_CALCOCO2_ENST00000508679_chr17_46937676_+_708nt CCGCGGCCTGCCCTCCAGGCGGAGGAGCCCGGACTGCGGAAGGATGGAGCTGGCCGCCGGAAGCTTCTCGGAGGAGCAGTTCTGGGAGGC CTGCGCCGAGCTCCAGCAGCCCGCTCTGGCCGGGGCCGACTGGCAGCTCCTAGTGGAGACCTCGGGCATCAGCATCTACCGGCTGCTGGA CAAGCTTTTGAAGAGGGAGAACAGCAGATTGCTCAGTTACATGGGTCTGGATTTTAATTCTTTGCCGTATCAAGTACCTACTTCAGATGA AGGAGGCGCAAGACAAAATCCAGGACTTGCCTATGGAAACCCATATTCTGGTATCCAAGAAAGTTCTTCCCCCAGCCCGCTCTCCATCAA GAAATGCCCTATCTGCAAAGCAGATGATATTTGTGATCACACCTTGGAGCAACAGCAGATGCAGCCCCTTTGTTTCAATTGTCCAATTTG TGACAAGATCTTCCCAGCTACAGAGAAGCAGATCTTTGAAGACCACGTGTTCTGCCACTCTCTCTGAGTATCCCAACCTCTTGGATGTAT ACAGAGATTTTATAGAATAGAACCTATAGCTTCTACCATGAGTTATATGAGTCAAGATCCTGCCTAACCTGAAATTATTAGGGATTTACT |
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FusionGenePPI for PCTP_CALCOCO2 |
| Go to ChiPPI (Chimeric Protein-Protein interactions) to see the chimeric PPI interaction in . |
| Protein-protein interactors with each fusion partner protein in wild-type (BIOGRID-3.4.160) |
| Hgene | Hgene's interactors | Tgene | Tgene's interactors |
| PCTP | ACOT13, PAX3, AGTRAP, VAPA | CALCOCO2 | TP53RK, LGALS8, FBF1, ZC2HC1C, CCDC185, LNX1, PIAS4, CCDC33, PSMA1, PTBP1, RABL6, CPNE7, ZNF101, LSM4, SHC1, GABARAPL2, VPS72, ZNF451, DBNDD2, ZNF638, FBXL18, ZNF205, FXR2, MCM10, POLI, PTBP2, AP5B1, KAT7, PCGF1, TCL1A, SMARCD1, TCEB3B, ABLIM1, CALCOCO2, ENKD1, ZNF426, C20orf195, SRI, FASTK, TRAF2, ZNF408, DAZAP2, RHPN1, APEX2, GABARAPL1, FAM107A, KANSL1, TAB3, TBK1, IKBKE, TBKBP1, MAP1LC3A, FMR1, MAVS, PRRC2A, KIAA1407, MTPAP, AZI2, TRAF4, MYO6, TAX1BP1, UBC, GEMIN4, IQCB1, RNF11, MAP1LC3C, DICER1, PARK2, SQSTM1, RPA2, ORC5, TRAF6, IKBKG, GIT2, RB1CC1, ADSL, ARNT2, MVP, NDN, PRKAB2, AES, CCNH, DCX, DDX6, DOCK2, HOXB9, LMO2, SMCP, MOS, MXI1, PFDN5, PHF1, RPL9, RPS27A, SDCBP, SNRPB, UBB, VARS, ARHGEF5, AKAP17A, NAA10, LMO4, STK16, TBRG4, FAM189A2, LITAF, EEF1E1, RIN1, AMMECR1, FARS2, MID2, DUSP12, BAHD1, PEG10, PSME4, FAM168A, PRPF31, ZNF337, NFU1, DCTN4, SLC15A3, ZNF581, HDAC7, CHCHD3, MAGOHB, FAM90A1, TBC1D22B, LIMS2, EXOSC5, CBX8, GATAD2B, KLHL42, FKBPL, TEKT3, METTL17, RBM15, DUSP26, LENG1, FAM161A, BEX2, RTN4IP1, ARHGEF39, LMF2, LONRF1, DDIT4L, GLYCTK, CWF19L2, ZNF564, PAPD4, PPP1R18, SPATA24, BCL6B, RTP5, CEP57L1, UBAC2, PEF1, RNF2, NRBF2, SULT1A2, BBOX1, CDK7, LDLRAD4, TTC23L, HLX, MAP1LC3B, GABARAP, U2AF2, ATG5, C1orf106, CHRDL1, SYNC, CEP55, BCAP29, HDAC11, RAB35, UBE2A |
| - Retained PPIs in in-frame fusion. |
| Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Still interaction with |
| Tgene | CALCOCO2 | chr17:53828605 | chr17:46937676 | ENST00000258947 | + | 9 | 13 | 371_381 | 336 | 447 | LGALS8 |
| Tgene | CALCOCO2 | chr17:53828605 | chr17:46937676 | ENST00000416445 | + | 8 | 12 | 371_381 | 294 | 405 | LGALS8 |
| Tgene | CALCOCO2 | chr17:53828605 | chr17:46937676 | ENST00000448105 | + | 10 | 14 | 371_381 | 360 | 471 | LGALS8 |
| Tgene | CALCOCO2 | chr17:53828605 | chr17:46937676 | ENST00000508679 | + | 8 | 12 | 371_381 | 264 | 375 | LGALS8 |
| Tgene | CALCOCO2 | chr17:53828605 | chr17:46937676 | ENST00000509507 | + | 10 | 14 | 371_381 | 357 | 468 | LGALS8 |
| Tgene | CALCOCO2 | chr17:53828605 | chr17:46937676 | ENST00000258947 | + | 9 | 13 | 395_446 | 336 | 447 | MYO6 |
| Tgene | CALCOCO2 | chr17:53828605 | chr17:46937676 | ENST00000416445 | + | 8 | 12 | 395_446 | 294 | 405 | MYO6 |
| Tgene | CALCOCO2 | chr17:53828605 | chr17:46937676 | ENST00000448105 | + | 10 | 14 | 395_446 | 360 | 471 | MYO6 |
| Tgene | CALCOCO2 | chr17:53828605 | chr17:46937676 | ENST00000508679 | + | 8 | 12 | 395_446 | 264 | 375 | MYO6 |
| Tgene | CALCOCO2 | chr17:53828605 | chr17:46937676 | ENST00000509507 | + | 10 | 14 | 395_446 | 357 | 468 | MYO6 |
| - Lost PPIs in in-frame fusion. |
| Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Interaction lost with |
| - Retained PPIs, but lost function due to frame-shift fusion. |
| Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Interaction lost with |
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RelatedDrugs for PCTP_CALCOCO2 |
| Drugs targeting genes involved in this fusion gene. (DrugBank Version 5.1.0 2018-04-02) |
| Partner | Gene | UniProtAcc | DrugBank ID | Drug name | Drug activity | Drug type | Drug status |
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RelatedDiseases for PCTP_CALCOCO2 |
| Diseases associated with fusion partners. (DisGeNet 4.0) |
| Partner | Gene | Disease ID | Disease name | # pubmeds | Source |
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