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Fusion gene ID: 26122 |
FusionGeneSummary for PBX1_RFWD2 |
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Fusion gene information | Fusion gene name: PBX1_RFWD2 | Fusion gene ID: 26122 | Hgene | Tgene | Gene symbol | PBX1 | RFWD2 | Gene ID | 5087 |
Gene name | PBX homeobox 1 | ||
Synonyms | CAKUHED | ||
Cytomap | 1q23.3 | ||
Type of gene | protein-coding | ||
Description | pre-B-cell leukemia transcription factor 1homeobox protein PBX1homeobox protein PRLpre-B-cell leukemia homeobox 1 | ||
Modification date | 20180519 | ||
UniProtAcc | P40424 | ||
Ensembl transtripts involved in fusion gene | ENST00000420696, ENST00000401534, ENST00000559240, ENST00000367897, ENST00000540236, ENST00000560641, ENST00000474046, ENST00000485769, ENST00000540246, | ENST00000367669, ENST00000308769, | |
Fusion gene scores | * DoF score | 13 X 6 X 3=234 | 16 X 10 X 8=1280 |
# samples | 15 | 15 | |
** MAII score | log2(15/234*10)=-0.641546029087524 possibly effective Gene in Pan-Cancer Fusion Genes (peGinPCFGs). DoF>8 and MAII<0 | log2(15/1280*10)=-3.09310940439148 possibly effective Gene in Pan-Cancer Fusion Genes (peGinPCFGs). DoF>8 and MAII<0 | |
Context | PubMed: PBX1 [Title/Abstract] AND RFWD2 [Title/Abstract] AND fusion [Title/Abstract] | ||
Functional or gene categories assigned by FusionGDB annotation | Oncogene involved fusion gene, in-frame and retained their domain. Tumor suppressor gene involved fusion gene, in-frame but not retained their domain. Tumor suppressor gene involved fusion gene, retained protein feature but frameshift. DDR (DNA damage repair) gene involved fusion gene, in-frame but not retained their domain. |
* DoF score (Degree of Frequency) = # partners X # break points X # cancer types ** MAII score (Major Active Isofusion Index) = log2(# samples/DoF score*10) |
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Partner | Gene | GO ID | GO term | PubMed ID |
![]() (ChiTars (NAR, 2018), tumorfusions (NAR, 2018), Gao et al. (Cell, 2018)) * All genome coordinats were lifted-over on hg19. * Click on the break point to see the gene structure around the break point region using the UCSC Genome Browser. |
Data type | Source | Cancer type | Sample | Hgene | Hchr | Hbp | Hstrand | Tgene | Tchr | Tbp | Tstrand |
TCGA | RV | SARC | TCGA-DX-A6YR-01A | PBX1 | chr1 | 164532548 | + | RFWD2 | chr1 | 175958615 | - |
* LD: Li Ding group's fusion gene list RV: Roel Verhaak group's fusion gene list ChiTaRs fusion database |
![]() * Click on the break point to see the gene structure around the break point region using the UCSC Genome Browser. |
ORF | Henst | Tenst | Hgene | Hchr | Hbp | Hstrand | Tgene | Tchr | Tbp | Tstrand |
In-frame | ENST00000420696 | ENST00000367669 | PBX1 | chr1 | 164532548 | + | RFWD2 | chr1 | 175958615 | - |
In-frame | ENST00000420696 | ENST00000308769 | PBX1 | chr1 | 164532548 | + | RFWD2 | chr1 | 175958615 | - |
In-frame | ENST00000401534 | ENST00000367669 | PBX1 | chr1 | 164532548 | + | RFWD2 | chr1 | 175958615 | - |
In-frame | ENST00000401534 | ENST00000308769 | PBX1 | chr1 | 164532548 | + | RFWD2 | chr1 | 175958615 | - |
In-frame | ENST00000559240 | ENST00000367669 | PBX1 | chr1 | 164532548 | + | RFWD2 | chr1 | 175958615 | - |
In-frame | ENST00000559240 | ENST00000308769 | PBX1 | chr1 | 164532548 | + | RFWD2 | chr1 | 175958615 | - |
In-frame | ENST00000367897 | ENST00000367669 | PBX1 | chr1 | 164532548 | + | RFWD2 | chr1 | 175958615 | - |
In-frame | ENST00000367897 | ENST00000308769 | PBX1 | chr1 | 164532548 | + | RFWD2 | chr1 | 175958615 | - |
In-frame | ENST00000540236 | ENST00000367669 | PBX1 | chr1 | 164532548 | + | RFWD2 | chr1 | 175958615 | - |
In-frame | ENST00000540236 | ENST00000308769 | PBX1 | chr1 | 164532548 | + | RFWD2 | chr1 | 175958615 | - |
intron-3CDS | ENST00000560641 | ENST00000367669 | PBX1 | chr1 | 164532548 | + | RFWD2 | chr1 | 175958615 | - |
intron-3CDS | ENST00000560641 | ENST00000308769 | PBX1 | chr1 | 164532548 | + | RFWD2 | chr1 | 175958615 | - |
intron-3CDS | ENST00000474046 | ENST00000367669 | PBX1 | chr1 | 164532548 | + | RFWD2 | chr1 | 175958615 | - |
intron-3CDS | ENST00000474046 | ENST00000308769 | PBX1 | chr1 | 164532548 | + | RFWD2 | chr1 | 175958615 | - |
intron-3CDS | ENST00000485769 | ENST00000367669 | PBX1 | chr1 | 164532548 | + | RFWD2 | chr1 | 175958615 | - |
intron-3CDS | ENST00000485769 | ENST00000308769 | PBX1 | chr1 | 164532548 | + | RFWD2 | chr1 | 175958615 | - |
intron-3CDS | ENST00000540246 | ENST00000367669 | PBX1 | chr1 | 164532548 | + | RFWD2 | chr1 | 175958615 | - |
intron-3CDS | ENST00000540246 | ENST00000308769 | PBX1 | chr1 | 164532548 | + | RFWD2 | chr1 | 175958615 | - |
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FusionProtFeatures for PBX1_RFWD2 |
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Hgene | Tgene |
PBX1 | RFWD2 |
Binds the sequence 5'-ATCAATCAA-3'. Acts as atranscriptional activator of PF4 in complex with MEIS1. Convertedinto a potent transcriptional activator by the (1;19)translocation. May have a role in steroidogenesis and,subsequently, sexual development and differentiation. IsoformPBX1b as part of a PDX1:PBX1b:MEIS2b complex in pancreatic acinarcells is involved in the transcriptional activation of the ELA1enhancer; the complex binds to the enhancer B element andcooperates with the transcription factor 1 complex (PTF1) bound tothe enhancer A element. Probably in complex with MEIS2, isinvolved in transcriptional regulation by KLF4. Acts as atranscriptional activator of NKX2-5 and a transcriptionalrepressor of CDKN2B. Together with NKX2-5, it is required forspleen development through a mechanism that involves CDKN2Brepression (By similarity). {ECO:0000250,ECO:0000269|PubMed:12609849, ECO:0000269|PubMed:21746878}. | Lectin that binds to various sugars: galactose > mannose= fucose > N-acetylglucosamine > N-acetylgalactosamine(PubMed:10224141). Acts as a chemoattractant, probably involved inthe regulation of cell migration (PubMed:28301481).{ECO:0000269|PubMed:10224141, ECO:0000269|PubMed:28301481}. |
![]() * Minus value of BPloci means that the break pointn is located before the CDS. |
- In-frame and retained protein feature among the 13 regional features. |
Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Protein feature | Protein feature note |
Tgene | >RFWD2 | chr1:164532548 | chr1:175958615 | ENST00000308769 | - | 13 | 19 | 553_593 | 552 | 708 | Repeat | Note=WD 4 |
Tgene | >RFWD2 | chr1:164532548 | chr1:175958615 | ENST00000308769 | - | 13 | 19 | 597_635 | 552 | 708 | Repeat | Note=WD 5 |
Tgene | >RFWD2 | chr1:164532548 | chr1:175958615 | ENST00000308769 | - | 13 | 19 | 638_677 | 552 | 708 | Repeat | Note=WD 6 |
Tgene | >RFWD2 | chr1:164532548 | chr1:175958615 | ENST00000308769 | - | 13 | 19 | 691_729 | 552 | 708 | Repeat | Note=WD 7 |
Tgene | >RFWD2 | chr1:164532548 | chr1:175958615 | ENST00000367669 | - | 14 | 20 | 597_635 | 576 | 732 | Repeat | Note=WD 5 |
Tgene | >RFWD2 | chr1:164532548 | chr1:175958615 | ENST00000367669 | - | 14 | 20 | 638_677 | 576 | 732 | Repeat | Note=WD 6 |
Tgene | >RFWD2 | chr1:164532548 | chr1:175958615 | ENST00000367669 | - | 14 | 20 | 691_729 | 576 | 732 | Repeat | Note=WD 7 |
- In-frame and not-retained protein feature among the 13 regional features. |
Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Protein feature | Protein feature note |
Hgene | >PBX1 | chr1:164532548 | chr1:175958615 | ENST00000367897 | + | 2 | 8 | 127_135 | 88 | 408 | Compositional bias | Note=Poly-Ala |
Hgene | >PBX1 | chr1:164532548 | chr1:175958615 | ENST00000401534 | + | 2 | 7 | 127_135 | 88 | 348 | Compositional bias | Note=Poly-Ala |
Hgene | >PBX1 | chr1:164532548 | chr1:175958615 | ENST00000420696 | + | 2 | 9 | 127_135 | 88 | 431 | Compositional bias | Note=Poly-Ala |
Hgene | >PBX1 | chr1:164532548 | chr1:175958615 | ENST00000540236 | + | 2 | 9 | 127_135 | 88 | 421 | Compositional bias | Note=Poly-Ala |
Hgene | >PBX1 | chr1:164532548 | chr1:175958615 | ENST00000367897 | + | 2 | 8 | 233_295 | 88 | 408 | DNA binding | Homeobox%3B TALE-type |
Hgene | >PBX1 | chr1:164532548 | chr1:175958615 | ENST00000401534 | + | 2 | 7 | 233_295 | 88 | 348 | DNA binding | Homeobox%3B TALE-type |
Hgene | >PBX1 | chr1:164532548 | chr1:175958615 | ENST00000420696 | + | 2 | 9 | 233_295 | 88 | 431 | DNA binding | Homeobox%3B TALE-type |
Hgene | >PBX1 | chr1:164532548 | chr1:175958615 | ENST00000540236 | + | 2 | 9 | 233_295 | 88 | 421 | DNA binding | Homeobox%3B TALE-type |
Tgene | RFWD2 | chr1:164532548 | chr1:175958615 | ENST00000308769 | - | 13 | 19 | 233_301 | 552 | 708 | Coiled coil | Ontology_term=ECO:0000255 |
Tgene | RFWD2 | chr1:164532548 | chr1:175958615 | ENST00000367669 | - | 14 | 20 | 233_301 | 576 | 732 | Coiled coil | Ontology_term=ECO:0000255 |
Tgene | RFWD2 | chr1:164532548 | chr1:175958615 | ENST00000308769 | - | 13 | 19 | 2_110 | 552 | 708 | Compositional bias | Note=Ser-rich |
Tgene | RFWD2 | chr1:164532548 | chr1:175958615 | ENST00000367669 | - | 14 | 20 | 2_110 | 576 | 732 | Compositional bias | Note=Ser-rich |
Tgene | RFWD2 | chr1:164532548 | chr1:175958615 | ENST00000308769 | - | 13 | 19 | 109_113 | 552 | 708 | Motif | Note=Nuclear localization signal 1 |
Tgene | RFWD2 | chr1:164532548 | chr1:175958615 | ENST00000308769 | - | 13 | 19 | 195_206 | 552 | 708 | Motif | Note=Nuclear localization signal 2 |
Tgene | RFWD2 | chr1:164532548 | chr1:175958615 | ENST00000308769 | - | 13 | 19 | 235_245 | 552 | 708 | Motif | Nuclear export signal |
Tgene | RFWD2 | chr1:164532548 | chr1:175958615 | ENST00000367669 | - | 14 | 20 | 109_113 | 576 | 732 | Motif | Note=Nuclear localization signal 1 |
Tgene | RFWD2 | chr1:164532548 | chr1:175958615 | ENST00000367669 | - | 14 | 20 | 195_206 | 576 | 732 | Motif | Note=Nuclear localization signal 2 |
Tgene | RFWD2 | chr1:164532548 | chr1:175958615 | ENST00000367669 | - | 14 | 20 | 235_245 | 576 | 732 | Motif | Nuclear export signal |
Tgene | RFWD2 | chr1:164532548 | chr1:175958615 | ENST00000308769 | - | 13 | 19 | 419_458 | 552 | 708 | Repeat | Note=WD 1 |
Tgene | RFWD2 | chr1:164532548 | chr1:175958615 | ENST00000308769 | - | 13 | 19 | 468_508 | 552 | 708 | Repeat | Note=WD 2 |
Tgene | RFWD2 | chr1:164532548 | chr1:175958615 | ENST00000308769 | - | 13 | 19 | 511_551 | 552 | 708 | Repeat | Note=WD 3 |
Tgene | RFWD2 | chr1:164532548 | chr1:175958615 | ENST00000367669 | - | 14 | 20 | 419_458 | 576 | 732 | Repeat | Note=WD 1 |
Tgene | RFWD2 | chr1:164532548 | chr1:175958615 | ENST00000367669 | - | 14 | 20 | 468_508 | 576 | 732 | Repeat | Note=WD 2 |
Tgene | RFWD2 | chr1:164532548 | chr1:175958615 | ENST00000367669 | - | 14 | 20 | 511_551 | 576 | 732 | Repeat | Note=WD 3 |
Tgene | RFWD2 | chr1:164532548 | chr1:175958615 | ENST00000367669 | - | 14 | 20 | 553_593 | 576 | 732 | Repeat | Note=WD 4 |
Tgene | RFWD2 | chr1:164532548 | chr1:175958615 | ENST00000308769 | - | 13 | 19 | 136_174 | 552 | 708 | Zinc finger | RING-type |
Tgene | RFWD2 | chr1:164532548 | chr1:175958615 | ENST00000367669 | - | 14 | 20 | 136_174 | 576 | 732 | Zinc finger | RING-type |
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FusionGeneSequence for PBX1_RFWD2 |
![]() (nt: nucleotides, aa: amino acids) |
* Fusion amino acid sequences. |
>In-frame_PBX1_ENST00000420696_chr1_164532548_+_RFWD2_ENST00000367669_chr1_175958615_-_244aa MDEQPRLMHSHAGVGMAGHPGLSQHLQDGAGGTEGEGGRKQDIGDILQQIMTITDQSLDEAQARKHALNCHRMKPALFNVLCEIKEKTDH CVHYYDLRNTKQPIMVFKGHRKAVSYAKFVSGEEIVSASTDSQLKLWNVGKPYCLRSFKGHINEKNFVGLASNGDYIACGSENNSLYLYY >In-frame_PBX1_ENST00000420696_chr1_164532548_+_RFWD2_ENST00000308769_chr1_175958615_-_244aa MDEQPRLMHSHAGVGMAGHPGLSQHLQDGAGGTEGEGGRKQDIGDILQQIMTITDQSLDEAQARKHALNCHRMKPALFNVLCEIKEKTDH CVHYYDLRNTKQPIMVFKGHRKAVSYAKFVSGEEIVSASTDSQLKLWNVGKPYCLRSFKGHINEKNFVGLASNGDYIACGSENNSLYLYY >In-frame_PBX1_ENST00000401534_chr1_164532548_+_RFWD2_ENST00000367669_chr1_175958615_-_244aa MDEQPRLMHSHAGVGMAGHPGLSQHLQDGAGGTEGEGGRKQDIGDILQQIMTITDQSLDEAQARKHALNCHRMKPALFNVLCEIKEKTDH CVHYYDLRNTKQPIMVFKGHRKAVSYAKFVSGEEIVSASTDSQLKLWNVGKPYCLRSFKGHINEKNFVGLASNGDYIACGSENNSLYLYY >In-frame_PBX1_ENST00000401534_chr1_164532548_+_RFWD2_ENST00000308769_chr1_175958615_-_244aa MDEQPRLMHSHAGVGMAGHPGLSQHLQDGAGGTEGEGGRKQDIGDILQQIMTITDQSLDEAQARKHALNCHRMKPALFNVLCEIKEKTDH CVHYYDLRNTKQPIMVFKGHRKAVSYAKFVSGEEIVSASTDSQLKLWNVGKPYCLRSFKGHINEKNFVGLASNGDYIACGSENNSLYLYY >In-frame_PBX1_ENST00000559240_chr1_164532548_+_RFWD2_ENST00000367669_chr1_175958615_-_244aa MDEQPRLMHSHAGVGMAGHPGLSQHLQDGAGGTEGEGGRKQDIGDILQQIMTITDQSLDEAQARKHALNCHRMKPALFNVLCEIKEKTDH CVHYYDLRNTKQPIMVFKGHRKAVSYAKFVSGEEIVSASTDSQLKLWNVGKPYCLRSFKGHINEKNFVGLASNGDYIACGSENNSLYLYY >In-frame_PBX1_ENST00000559240_chr1_164532548_+_RFWD2_ENST00000308769_chr1_175958615_-_244aa MDEQPRLMHSHAGVGMAGHPGLSQHLQDGAGGTEGEGGRKQDIGDILQQIMTITDQSLDEAQARKHALNCHRMKPALFNVLCEIKEKTDH CVHYYDLRNTKQPIMVFKGHRKAVSYAKFVSGEEIVSASTDSQLKLWNVGKPYCLRSFKGHINEKNFVGLASNGDYIACGSENNSLYLYY >In-frame_PBX1_ENST00000367897_chr1_164532548_+_RFWD2_ENST00000367669_chr1_175958615_-_244aa MDEQPRLMHSHAGVGMAGHPGLSQHLQDGAGGTEGEGGRKQDIGDILQQIMTITDQSLDEAQARKHALNCHRMKPALFNVLCEIKEKTDH CVHYYDLRNTKQPIMVFKGHRKAVSYAKFVSGEEIVSASTDSQLKLWNVGKPYCLRSFKGHINEKNFVGLASNGDYIACGSENNSLYLYY >In-frame_PBX1_ENST00000367897_chr1_164532548_+_RFWD2_ENST00000308769_chr1_175958615_-_244aa MDEQPRLMHSHAGVGMAGHPGLSQHLQDGAGGTEGEGGRKQDIGDILQQIMTITDQSLDEAQARKHALNCHRMKPALFNVLCEIKEKTDH CVHYYDLRNTKQPIMVFKGHRKAVSYAKFVSGEEIVSASTDSQLKLWNVGKPYCLRSFKGHINEKNFVGLASNGDYIACGSENNSLYLYY >In-frame_PBX1_ENST00000540236_chr1_164532548_+_RFWD2_ENST00000367669_chr1_175958615_-_244aa MDEQPRLMHSHAGVGMAGHPGLSQHLQDGAGGTEGEGGRKQDIGDILQQIMTITDQSLDEAQARKHALNCHRMKPALFNVLCEIKEKTDH CVHYYDLRNTKQPIMVFKGHRKAVSYAKFVSGEEIVSASTDSQLKLWNVGKPYCLRSFKGHINEKNFVGLASNGDYIACGSENNSLYLYY >In-frame_PBX1_ENST00000540236_chr1_164532548_+_RFWD2_ENST00000308769_chr1_175958615_-_244aa MDEQPRLMHSHAGVGMAGHPGLSQHLQDGAGGTEGEGGRKQDIGDILQQIMTITDQSLDEAQARKHALNCHRMKPALFNVLCEIKEKTDH CVHYYDLRNTKQPIMVFKGHRKAVSYAKFVSGEEIVSASTDSQLKLWNVGKPYCLRSFKGHINEKNFVGLASNGDYIACGSENNSLYLYY |
* Fusion transcript sequences (only coding sequence (CDS) region). |
>In-frame_PBX1_ENST00000420696_chr1_164532548_+_RFWD2_ENST00000367669_chr1_175958615_-_732nt ATGGACGAGCAGCCCAGGCTGATGCATTCCCATGCTGGGGTCGGGATGGCCGGACACCCCGGCCTGTCCCAGCACTTGCAGGATGGGGCC GGAGGGACCGAGGGGGAGGGCGGGAGGAAGCAGGACATTGGAGACATTTTACAGCAAATTATGACCATCACAGACCAGAGTTTGGATGAG GCGCAGGCCAGAAAACATGCTTTAAACTGCCACAGAATGAAGCCTGCCTTGTTTAATGTGTTGTGTGAAATCAAAGAAAAAACAGATCAC TGTGTCCACTACTATGATCTTCGTAACACTAAACAGCCAATCATGGTATTCAAAGGACACCGTAAAGCAGTCTCTTATGCAAAGTTTGTG AGTGGTGAGGAAATTGTCTCTGCCTCAACAGACAGTCAGCTAAAACTGTGGAATGTAGGGAAACCATACTGCCTACGTTCCTTCAAGGGT CATATCAATGAAAAAAACTTTGTAGGCCTGGCTTCCAATGGAGATTATATAGCTTGTGGAAGTGAAAATAACTCTCTCTACCTGTACTAT AAAGGACTTTCTAAGACTTTGCTAACTTTTAAGTTTGATACAGTCAAAAGTGTTCTCGACAAAGACCGAAAAGAAGATGATACAAATGAA TTTGTTAGTGCTGTGTGCTGGAGGGCACTACCAGATGGGGAGTCCAATGTGCTGATTGCTGCTAACAGTCAGGGTACAATTAAGGTGCTA >In-frame_PBX1_ENST00000420696_chr1_164532548_+_RFWD2_ENST00000308769_chr1_175958615_-_732nt ATGGACGAGCAGCCCAGGCTGATGCATTCCCATGCTGGGGTCGGGATGGCCGGACACCCCGGCCTGTCCCAGCACTTGCAGGATGGGGCC GGAGGGACCGAGGGGGAGGGCGGGAGGAAGCAGGACATTGGAGACATTTTACAGCAAATTATGACCATCACAGACCAGAGTTTGGATGAG GCGCAGGCCAGAAAACATGCTTTAAACTGCCACAGAATGAAGCCTGCCTTGTTTAATGTGTTGTGTGAAATCAAAGAAAAAACAGATCAC TGTGTCCACTACTATGATCTTCGTAACACTAAACAGCCAATCATGGTATTCAAAGGACACCGTAAAGCAGTCTCTTATGCAAAGTTTGTG AGTGGTGAGGAAATTGTCTCTGCCTCAACAGACAGTCAGCTAAAACTGTGGAATGTAGGGAAACCATACTGCCTACGTTCCTTCAAGGGT CATATCAATGAAAAAAACTTTGTAGGCCTGGCTTCCAATGGAGATTATATAGCTTGTGGAAGTGAAAATAACTCTCTCTACCTGTACTAT AAAGGACTTTCTAAGACTTTGCTAACTTTTAAGTTTGATACAGTCAAAAGTGTTCTCGACAAAGACCGAAAAGAAGATGATACAAATGAA TTTGTTAGTGCTGTGTGCTGGAGGGCACTACCAGATGGGGAGTCCAATGTGCTGATTGCTGCTAACAGTCAGGGTACAATTAAGGTGCTA >In-frame_PBX1_ENST00000401534_chr1_164532548_+_RFWD2_ENST00000367669_chr1_175958615_-_732nt ATGGACGAGCAGCCCAGGCTGATGCATTCCCATGCTGGGGTCGGGATGGCCGGACACCCCGGCCTGTCCCAGCACTTGCAGGATGGGGCC GGAGGGACCGAGGGGGAGGGCGGGAGGAAGCAGGACATTGGAGACATTTTACAGCAAATTATGACCATCACAGACCAGAGTTTGGATGAG GCGCAGGCCAGAAAACATGCTTTAAACTGCCACAGAATGAAGCCTGCCTTGTTTAATGTGTTGTGTGAAATCAAAGAAAAAACAGATCAC TGTGTCCACTACTATGATCTTCGTAACACTAAACAGCCAATCATGGTATTCAAAGGACACCGTAAAGCAGTCTCTTATGCAAAGTTTGTG AGTGGTGAGGAAATTGTCTCTGCCTCAACAGACAGTCAGCTAAAACTGTGGAATGTAGGGAAACCATACTGCCTACGTTCCTTCAAGGGT CATATCAATGAAAAAAACTTTGTAGGCCTGGCTTCCAATGGAGATTATATAGCTTGTGGAAGTGAAAATAACTCTCTCTACCTGTACTAT AAAGGACTTTCTAAGACTTTGCTAACTTTTAAGTTTGATACAGTCAAAAGTGTTCTCGACAAAGACCGAAAAGAAGATGATACAAATGAA TTTGTTAGTGCTGTGTGCTGGAGGGCACTACCAGATGGGGAGTCCAATGTGCTGATTGCTGCTAACAGTCAGGGTACAATTAAGGTGCTA >In-frame_PBX1_ENST00000401534_chr1_164532548_+_RFWD2_ENST00000308769_chr1_175958615_-_732nt ATGGACGAGCAGCCCAGGCTGATGCATTCCCATGCTGGGGTCGGGATGGCCGGACACCCCGGCCTGTCCCAGCACTTGCAGGATGGGGCC GGAGGGACCGAGGGGGAGGGCGGGAGGAAGCAGGACATTGGAGACATTTTACAGCAAATTATGACCATCACAGACCAGAGTTTGGATGAG GCGCAGGCCAGAAAACATGCTTTAAACTGCCACAGAATGAAGCCTGCCTTGTTTAATGTGTTGTGTGAAATCAAAGAAAAAACAGATCAC TGTGTCCACTACTATGATCTTCGTAACACTAAACAGCCAATCATGGTATTCAAAGGACACCGTAAAGCAGTCTCTTATGCAAAGTTTGTG AGTGGTGAGGAAATTGTCTCTGCCTCAACAGACAGTCAGCTAAAACTGTGGAATGTAGGGAAACCATACTGCCTACGTTCCTTCAAGGGT CATATCAATGAAAAAAACTTTGTAGGCCTGGCTTCCAATGGAGATTATATAGCTTGTGGAAGTGAAAATAACTCTCTCTACCTGTACTAT AAAGGACTTTCTAAGACTTTGCTAACTTTTAAGTTTGATACAGTCAAAAGTGTTCTCGACAAAGACCGAAAAGAAGATGATACAAATGAA TTTGTTAGTGCTGTGTGCTGGAGGGCACTACCAGATGGGGAGTCCAATGTGCTGATTGCTGCTAACAGTCAGGGTACAATTAAGGTGCTA >In-frame_PBX1_ENST00000559240_chr1_164532548_+_RFWD2_ENST00000367669_chr1_175958615_-_732nt ATGGACGAGCAGCCCAGGCTGATGCATTCCCATGCTGGGGTCGGGATGGCCGGACACCCCGGCCTGTCCCAGCACTTGCAGGATGGGGCC GGAGGGACCGAGGGGGAGGGCGGGAGGAAGCAGGACATTGGAGACATTTTACAGCAAATTATGACCATCACAGACCAGAGTTTGGATGAG GCGCAGGCCAGAAAACATGCTTTAAACTGCCACAGAATGAAGCCTGCCTTGTTTAATGTGTTGTGTGAAATCAAAGAAAAAACAGATCAC TGTGTCCACTACTATGATCTTCGTAACACTAAACAGCCAATCATGGTATTCAAAGGACACCGTAAAGCAGTCTCTTATGCAAAGTTTGTG AGTGGTGAGGAAATTGTCTCTGCCTCAACAGACAGTCAGCTAAAACTGTGGAATGTAGGGAAACCATACTGCCTACGTTCCTTCAAGGGT CATATCAATGAAAAAAACTTTGTAGGCCTGGCTTCCAATGGAGATTATATAGCTTGTGGAAGTGAAAATAACTCTCTCTACCTGTACTAT AAAGGACTTTCTAAGACTTTGCTAACTTTTAAGTTTGATACAGTCAAAAGTGTTCTCGACAAAGACCGAAAAGAAGATGATACAAATGAA TTTGTTAGTGCTGTGTGCTGGAGGGCACTACCAGATGGGGAGTCCAATGTGCTGATTGCTGCTAACAGTCAGGGTACAATTAAGGTGCTA >In-frame_PBX1_ENST00000559240_chr1_164532548_+_RFWD2_ENST00000308769_chr1_175958615_-_732nt ATGGACGAGCAGCCCAGGCTGATGCATTCCCATGCTGGGGTCGGGATGGCCGGACACCCCGGCCTGTCCCAGCACTTGCAGGATGGGGCC GGAGGGACCGAGGGGGAGGGCGGGAGGAAGCAGGACATTGGAGACATTTTACAGCAAATTATGACCATCACAGACCAGAGTTTGGATGAG GCGCAGGCCAGAAAACATGCTTTAAACTGCCACAGAATGAAGCCTGCCTTGTTTAATGTGTTGTGTGAAATCAAAGAAAAAACAGATCAC TGTGTCCACTACTATGATCTTCGTAACACTAAACAGCCAATCATGGTATTCAAAGGACACCGTAAAGCAGTCTCTTATGCAAAGTTTGTG AGTGGTGAGGAAATTGTCTCTGCCTCAACAGACAGTCAGCTAAAACTGTGGAATGTAGGGAAACCATACTGCCTACGTTCCTTCAAGGGT CATATCAATGAAAAAAACTTTGTAGGCCTGGCTTCCAATGGAGATTATATAGCTTGTGGAAGTGAAAATAACTCTCTCTACCTGTACTAT AAAGGACTTTCTAAGACTTTGCTAACTTTTAAGTTTGATACAGTCAAAAGTGTTCTCGACAAAGACCGAAAAGAAGATGATACAAATGAA TTTGTTAGTGCTGTGTGCTGGAGGGCACTACCAGATGGGGAGTCCAATGTGCTGATTGCTGCTAACAGTCAGGGTACAATTAAGGTGCTA >In-frame_PBX1_ENST00000367897_chr1_164532548_+_RFWD2_ENST00000367669_chr1_175958615_-_732nt ATGGACGAGCAGCCCAGGCTGATGCATTCCCATGCTGGGGTCGGGATGGCCGGACACCCCGGCCTGTCCCAGCACTTGCAGGATGGGGCC GGAGGGACCGAGGGGGAGGGCGGGAGGAAGCAGGACATTGGAGACATTTTACAGCAAATTATGACCATCACAGACCAGAGTTTGGATGAG GCGCAGGCCAGAAAACATGCTTTAAACTGCCACAGAATGAAGCCTGCCTTGTTTAATGTGTTGTGTGAAATCAAAGAAAAAACAGATCAC TGTGTCCACTACTATGATCTTCGTAACACTAAACAGCCAATCATGGTATTCAAAGGACACCGTAAAGCAGTCTCTTATGCAAAGTTTGTG AGTGGTGAGGAAATTGTCTCTGCCTCAACAGACAGTCAGCTAAAACTGTGGAATGTAGGGAAACCATACTGCCTACGTTCCTTCAAGGGT CATATCAATGAAAAAAACTTTGTAGGCCTGGCTTCCAATGGAGATTATATAGCTTGTGGAAGTGAAAATAACTCTCTCTACCTGTACTAT AAAGGACTTTCTAAGACTTTGCTAACTTTTAAGTTTGATACAGTCAAAAGTGTTCTCGACAAAGACCGAAAAGAAGATGATACAAATGAA TTTGTTAGTGCTGTGTGCTGGAGGGCACTACCAGATGGGGAGTCCAATGTGCTGATTGCTGCTAACAGTCAGGGTACAATTAAGGTGCTA >In-frame_PBX1_ENST00000367897_chr1_164532548_+_RFWD2_ENST00000308769_chr1_175958615_-_732nt ATGGACGAGCAGCCCAGGCTGATGCATTCCCATGCTGGGGTCGGGATGGCCGGACACCCCGGCCTGTCCCAGCACTTGCAGGATGGGGCC GGAGGGACCGAGGGGGAGGGCGGGAGGAAGCAGGACATTGGAGACATTTTACAGCAAATTATGACCATCACAGACCAGAGTTTGGATGAG GCGCAGGCCAGAAAACATGCTTTAAACTGCCACAGAATGAAGCCTGCCTTGTTTAATGTGTTGTGTGAAATCAAAGAAAAAACAGATCAC TGTGTCCACTACTATGATCTTCGTAACACTAAACAGCCAATCATGGTATTCAAAGGACACCGTAAAGCAGTCTCTTATGCAAAGTTTGTG AGTGGTGAGGAAATTGTCTCTGCCTCAACAGACAGTCAGCTAAAACTGTGGAATGTAGGGAAACCATACTGCCTACGTTCCTTCAAGGGT CATATCAATGAAAAAAACTTTGTAGGCCTGGCTTCCAATGGAGATTATATAGCTTGTGGAAGTGAAAATAACTCTCTCTACCTGTACTAT AAAGGACTTTCTAAGACTTTGCTAACTTTTAAGTTTGATACAGTCAAAAGTGTTCTCGACAAAGACCGAAAAGAAGATGATACAAATGAA TTTGTTAGTGCTGTGTGCTGGAGGGCACTACCAGATGGGGAGTCCAATGTGCTGATTGCTGCTAACAGTCAGGGTACAATTAAGGTGCTA >In-frame_PBX1_ENST00000540236_chr1_164532548_+_RFWD2_ENST00000367669_chr1_175958615_-_732nt ATGGACGAGCAGCCCAGGCTGATGCATTCCCATGCTGGGGTCGGGATGGCCGGACACCCCGGCCTGTCCCAGCACTTGCAGGATGGGGCC GGAGGGACCGAGGGGGAGGGCGGGAGGAAGCAGGACATTGGAGACATTTTACAGCAAATTATGACCATCACAGACCAGAGTTTGGATGAG GCGCAGGCCAGAAAACATGCTTTAAACTGCCACAGAATGAAGCCTGCCTTGTTTAATGTGTTGTGTGAAATCAAAGAAAAAACAGATCAC TGTGTCCACTACTATGATCTTCGTAACACTAAACAGCCAATCATGGTATTCAAAGGACACCGTAAAGCAGTCTCTTATGCAAAGTTTGTG AGTGGTGAGGAAATTGTCTCTGCCTCAACAGACAGTCAGCTAAAACTGTGGAATGTAGGGAAACCATACTGCCTACGTTCCTTCAAGGGT CATATCAATGAAAAAAACTTTGTAGGCCTGGCTTCCAATGGAGATTATATAGCTTGTGGAAGTGAAAATAACTCTCTCTACCTGTACTAT AAAGGACTTTCTAAGACTTTGCTAACTTTTAAGTTTGATACAGTCAAAAGTGTTCTCGACAAAGACCGAAAAGAAGATGATACAAATGAA TTTGTTAGTGCTGTGTGCTGGAGGGCACTACCAGATGGGGAGTCCAATGTGCTGATTGCTGCTAACAGTCAGGGTACAATTAAGGTGCTA >In-frame_PBX1_ENST00000540236_chr1_164532548_+_RFWD2_ENST00000308769_chr1_175958615_-_732nt ATGGACGAGCAGCCCAGGCTGATGCATTCCCATGCTGGGGTCGGGATGGCCGGACACCCCGGCCTGTCCCAGCACTTGCAGGATGGGGCC GGAGGGACCGAGGGGGAGGGCGGGAGGAAGCAGGACATTGGAGACATTTTACAGCAAATTATGACCATCACAGACCAGAGTTTGGATGAG GCGCAGGCCAGAAAACATGCTTTAAACTGCCACAGAATGAAGCCTGCCTTGTTTAATGTGTTGTGTGAAATCAAAGAAAAAACAGATCAC TGTGTCCACTACTATGATCTTCGTAACACTAAACAGCCAATCATGGTATTCAAAGGACACCGTAAAGCAGTCTCTTATGCAAAGTTTGTG AGTGGTGAGGAAATTGTCTCTGCCTCAACAGACAGTCAGCTAAAACTGTGGAATGTAGGGAAACCATACTGCCTACGTTCCTTCAAGGGT CATATCAATGAAAAAAACTTTGTAGGCCTGGCTTCCAATGGAGATTATATAGCTTGTGGAAGTGAAAATAACTCTCTCTACCTGTACTAT AAAGGACTTTCTAAGACTTTGCTAACTTTTAAGTTTGATACAGTCAAAAGTGTTCTCGACAAAGACCGAAAAGAAGATGATACAAATGAA TTTGTTAGTGCTGTGTGCTGGAGGGCACTACCAGATGGGGAGTCCAATGTGCTGATTGCTGCTAACAGTCAGGGTACAATTAAGGTGCTA |
* Fusion transcript sequences (Full-length transcript). |
>In-frame_PBX1_ENST00000420696_chr1_164532548_+_RFWD2_ENST00000367669_chr1_175958615_-_1242nt ATCCTCCCACCATCCTCTAAAGAGGCAAAGGGATTTTTTTTTTCTTTTGGTCTTCTTTTTTCCCCCTTCCCTGTTTATCCTGAAAAGGAT TTGAAGACAAGCTTGAAGGATAAAAAGCCTTGGTGCTTCCCAGGAGCCGAGCCGAGGAGCAGAAGAGGAAGAGCCGGGGGCTGCCGTAGC CTTTGGAGATGGACGAGCAGCCCAGGCTGATGCATTCCCATGCTGGGGTCGGGATGGCCGGACACCCCGGCCTGTCCCAGCACTTGCAGG ATGGGGCCGGAGGGACCGAGGGGGAGGGCGGGAGGAAGCAGGACATTGGAGACATTTTACAGCAAATTATGACCATCACAGACCAGAGTT TGGATGAGGCGCAGGCCAGAAAACATGCTTTAAACTGCCACAGAATGAAGCCTGCCTTGTTTAATGTGTTGTGTGAAATCAAAGAAAAAA CAGATCACTGTGTCCACTACTATGATCTTCGTAACACTAAACAGCCAATCATGGTATTCAAAGGACACCGTAAAGCAGTCTCTTATGCAA AGTTTGTGAGTGGTGAGGAAATTGTCTCTGCCTCAACAGACAGTCAGCTAAAACTGTGGAATGTAGGGAAACCATACTGCCTACGTTCCT TCAAGGGTCATATCAATGAAAAAAACTTTGTAGGCCTGGCTTCCAATGGAGATTATATAGCTTGTGGAAGTGAAAATAACTCTCTCTACC TGTACTATAAAGGACTTTCTAAGACTTTGCTAACTTTTAAGTTTGATACAGTCAAAAGTGTTCTCGACAAAGACCGAAAAGAAGATGATA CAAATGAATTTGTTAGTGCTGTGTGCTGGAGGGCACTACCAGATGGGGAGTCCAATGTGCTGATTGCTGCTAACAGTCAGGGTACAATTA AGGTGCTAGAATTGGTATGAAGGGTTAACTCAAGTCAAATTGTACTTGATCCTGCTGAAATACATCTGCAGCTGACAATGAGAGAAGAAA CAGAAAATGTCATGTGATGTCTCTCCCCAAAGTCATCATGGGTTTTGGATTTGTTTTGAATATTTTTTTCTTTTTTTCTTTTCCCTCCTT TATGACCTTTGGGACATTGGGAATACCCAGCCAACTCTCCACCATCAATGTAACTCCATGGACATTGCTGCTCTTGGTGGTGTTATCTAA >In-frame_PBX1_ENST00000420696_chr1_164532548_+_RFWD2_ENST00000308769_chr1_175958615_-_920nt ATCCTCCCACCATCCTCTAAAGAGGCAAAGGGATTTTTTTTTTCTTTTGGTCTTCTTTTTTCCCCCTTCCCTGTTTATCCTGAAAAGGAT TTGAAGACAAGCTTGAAGGATAAAAAGCCTTGGTGCTTCCCAGGAGCCGAGCCGAGGAGCAGAAGAGGAAGAGCCGGGGGCTGCCGTAGC CTTTGGAGATGGACGAGCAGCCCAGGCTGATGCATTCCCATGCTGGGGTCGGGATGGCCGGACACCCCGGCCTGTCCCAGCACTTGCAGG ATGGGGCCGGAGGGACCGAGGGGGAGGGCGGGAGGAAGCAGGACATTGGAGACATTTTACAGCAAATTATGACCATCACAGACCAGAGTT TGGATGAGGCGCAGGCCAGAAAACATGCTTTAAACTGCCACAGAATGAAGCCTGCCTTGTTTAATGTGTTGTGTGAAATCAAAGAAAAAA CAGATCACTGTGTCCACTACTATGATCTTCGTAACACTAAACAGCCAATCATGGTATTCAAAGGACACCGTAAAGCAGTCTCTTATGCAA AGTTTGTGAGTGGTGAGGAAATTGTCTCTGCCTCAACAGACAGTCAGCTAAAACTGTGGAATGTAGGGAAACCATACTGCCTACGTTCCT TCAAGGGTCATATCAATGAAAAAAACTTTGTAGGCCTGGCTTCCAATGGAGATTATATAGCTTGTGGAAGTGAAAATAACTCTCTCTACC TGTACTATAAAGGACTTTCTAAGACTTTGCTAACTTTTAAGTTTGATACAGTCAAAAGTGTTCTCGACAAAGACCGAAAAGAAGATGATA CAAATGAATTTGTTAGTGCTGTGTGCTGGAGGGCACTACCAGATGGGGAGTCCAATGTGCTGATTGCTGCTAACAGTCAGGGTACAATTA >In-frame_PBX1_ENST00000401534_chr1_164532548_+_RFWD2_ENST00000367669_chr1_175958615_-_1054nt ATGGACGAGCAGCCCAGGCTGATGCATTCCCATGCTGGGGTCGGGATGGCCGGACACCCCGGCCTGTCCCAGCACTTGCAGGATGGGGCC GGAGGGACCGAGGGGGAGGGCGGGAGGAAGCAGGACATTGGAGACATTTTACAGCAAATTATGACCATCACAGACCAGAGTTTGGATGAG GCGCAGGCCAGAAAACATGCTTTAAACTGCCACAGAATGAAGCCTGCCTTGTTTAATGTGTTGTGTGAAATCAAAGAAAAAACAGATCAC TGTGTCCACTACTATGATCTTCGTAACACTAAACAGCCAATCATGGTATTCAAAGGACACCGTAAAGCAGTCTCTTATGCAAAGTTTGTG AGTGGTGAGGAAATTGTCTCTGCCTCAACAGACAGTCAGCTAAAACTGTGGAATGTAGGGAAACCATACTGCCTACGTTCCTTCAAGGGT CATATCAATGAAAAAAACTTTGTAGGCCTGGCTTCCAATGGAGATTATATAGCTTGTGGAAGTGAAAATAACTCTCTCTACCTGTACTAT AAAGGACTTTCTAAGACTTTGCTAACTTTTAAGTTTGATACAGTCAAAAGTGTTCTCGACAAAGACCGAAAAGAAGATGATACAAATGAA TTTGTTAGTGCTGTGTGCTGGAGGGCACTACCAGATGGGGAGTCCAATGTGCTGATTGCTGCTAACAGTCAGGGTACAATTAAGGTGCTA GAATTGGTATGAAGGGTTAACTCAAGTCAAATTGTACTTGATCCTGCTGAAATACATCTGCAGCTGACAATGAGAGAAGAAACAGAAAAT GTCATGTGATGTCTCTCCCCAAAGTCATCATGGGTTTTGGATTTGTTTTGAATATTTTTTTCTTTTTTTCTTTTCCCTCCTTTATGACCT TTGGGACATTGGGAATACCCAGCCAACTCTCCACCATCAATGTAACTCCATGGACATTGCTGCTCTTGGTGGTGTTATCTAATTTTTGTG >In-frame_PBX1_ENST00000401534_chr1_164532548_+_RFWD2_ENST00000308769_chr1_175958615_-_732nt ATGGACGAGCAGCCCAGGCTGATGCATTCCCATGCTGGGGTCGGGATGGCCGGACACCCCGGCCTGTCCCAGCACTTGCAGGATGGGGCC GGAGGGACCGAGGGGGAGGGCGGGAGGAAGCAGGACATTGGAGACATTTTACAGCAAATTATGACCATCACAGACCAGAGTTTGGATGAG GCGCAGGCCAGAAAACATGCTTTAAACTGCCACAGAATGAAGCCTGCCTTGTTTAATGTGTTGTGTGAAATCAAAGAAAAAACAGATCAC TGTGTCCACTACTATGATCTTCGTAACACTAAACAGCCAATCATGGTATTCAAAGGACACCGTAAAGCAGTCTCTTATGCAAAGTTTGTG AGTGGTGAGGAAATTGTCTCTGCCTCAACAGACAGTCAGCTAAAACTGTGGAATGTAGGGAAACCATACTGCCTACGTTCCTTCAAGGGT CATATCAATGAAAAAAACTTTGTAGGCCTGGCTTCCAATGGAGATTATATAGCTTGTGGAAGTGAAAATAACTCTCTCTACCTGTACTAT AAAGGACTTTCTAAGACTTTGCTAACTTTTAAGTTTGATACAGTCAAAAGTGTTCTCGACAAAGACCGAAAAGAAGATGATACAAATGAA TTTGTTAGTGCTGTGTGCTGGAGGGCACTACCAGATGGGGAGTCCAATGTGCTGATTGCTGCTAACAGTCAGGGTACAATTAAGGTGCTA >In-frame_PBX1_ENST00000559240_chr1_164532548_+_RFWD2_ENST00000367669_chr1_175958615_-_1054nt ATGGACGAGCAGCCCAGGCTGATGCATTCCCATGCTGGGGTCGGGATGGCCGGACACCCCGGCCTGTCCCAGCACTTGCAGGATGGGGCC GGAGGGACCGAGGGGGAGGGCGGGAGGAAGCAGGACATTGGAGACATTTTACAGCAAATTATGACCATCACAGACCAGAGTTTGGATGAG GCGCAGGCCAGAAAACATGCTTTAAACTGCCACAGAATGAAGCCTGCCTTGTTTAATGTGTTGTGTGAAATCAAAGAAAAAACAGATCAC TGTGTCCACTACTATGATCTTCGTAACACTAAACAGCCAATCATGGTATTCAAAGGACACCGTAAAGCAGTCTCTTATGCAAAGTTTGTG AGTGGTGAGGAAATTGTCTCTGCCTCAACAGACAGTCAGCTAAAACTGTGGAATGTAGGGAAACCATACTGCCTACGTTCCTTCAAGGGT CATATCAATGAAAAAAACTTTGTAGGCCTGGCTTCCAATGGAGATTATATAGCTTGTGGAAGTGAAAATAACTCTCTCTACCTGTACTAT AAAGGACTTTCTAAGACTTTGCTAACTTTTAAGTTTGATACAGTCAAAAGTGTTCTCGACAAAGACCGAAAAGAAGATGATACAAATGAA TTTGTTAGTGCTGTGTGCTGGAGGGCACTACCAGATGGGGAGTCCAATGTGCTGATTGCTGCTAACAGTCAGGGTACAATTAAGGTGCTA GAATTGGTATGAAGGGTTAACTCAAGTCAAATTGTACTTGATCCTGCTGAAATACATCTGCAGCTGACAATGAGAGAAGAAACAGAAAAT GTCATGTGATGTCTCTCCCCAAAGTCATCATGGGTTTTGGATTTGTTTTGAATATTTTTTTCTTTTTTTCTTTTCCCTCCTTTATGACCT TTGGGACATTGGGAATACCCAGCCAACTCTCCACCATCAATGTAACTCCATGGACATTGCTGCTCTTGGTGGTGTTATCTAATTTTTGTG >In-frame_PBX1_ENST00000559240_chr1_164532548_+_RFWD2_ENST00000308769_chr1_175958615_-_732nt ATGGACGAGCAGCCCAGGCTGATGCATTCCCATGCTGGGGTCGGGATGGCCGGACACCCCGGCCTGTCCCAGCACTTGCAGGATGGGGCC GGAGGGACCGAGGGGGAGGGCGGGAGGAAGCAGGACATTGGAGACATTTTACAGCAAATTATGACCATCACAGACCAGAGTTTGGATGAG GCGCAGGCCAGAAAACATGCTTTAAACTGCCACAGAATGAAGCCTGCCTTGTTTAATGTGTTGTGTGAAATCAAAGAAAAAACAGATCAC TGTGTCCACTACTATGATCTTCGTAACACTAAACAGCCAATCATGGTATTCAAAGGACACCGTAAAGCAGTCTCTTATGCAAAGTTTGTG AGTGGTGAGGAAATTGTCTCTGCCTCAACAGACAGTCAGCTAAAACTGTGGAATGTAGGGAAACCATACTGCCTACGTTCCTTCAAGGGT CATATCAATGAAAAAAACTTTGTAGGCCTGGCTTCCAATGGAGATTATATAGCTTGTGGAAGTGAAAATAACTCTCTCTACCTGTACTAT AAAGGACTTTCTAAGACTTTGCTAACTTTTAAGTTTGATACAGTCAAAAGTGTTCTCGACAAAGACCGAAAAGAAGATGATACAAATGAA TTTGTTAGTGCTGTGTGCTGGAGGGCACTACCAGATGGGGAGTCCAATGTGCTGATTGCTGCTAACAGTCAGGGTACAATTAAGGTGCTA >In-frame_PBX1_ENST00000367897_chr1_164532548_+_RFWD2_ENST00000367669_chr1_175958615_-_1054nt ATGGACGAGCAGCCCAGGCTGATGCATTCCCATGCTGGGGTCGGGATGGCCGGACACCCCGGCCTGTCCCAGCACTTGCAGGATGGGGCC GGAGGGACCGAGGGGGAGGGCGGGAGGAAGCAGGACATTGGAGACATTTTACAGCAAATTATGACCATCACAGACCAGAGTTTGGATGAG GCGCAGGCCAGAAAACATGCTTTAAACTGCCACAGAATGAAGCCTGCCTTGTTTAATGTGTTGTGTGAAATCAAAGAAAAAACAGATCAC TGTGTCCACTACTATGATCTTCGTAACACTAAACAGCCAATCATGGTATTCAAAGGACACCGTAAAGCAGTCTCTTATGCAAAGTTTGTG AGTGGTGAGGAAATTGTCTCTGCCTCAACAGACAGTCAGCTAAAACTGTGGAATGTAGGGAAACCATACTGCCTACGTTCCTTCAAGGGT CATATCAATGAAAAAAACTTTGTAGGCCTGGCTTCCAATGGAGATTATATAGCTTGTGGAAGTGAAAATAACTCTCTCTACCTGTACTAT AAAGGACTTTCTAAGACTTTGCTAACTTTTAAGTTTGATACAGTCAAAAGTGTTCTCGACAAAGACCGAAAAGAAGATGATACAAATGAA TTTGTTAGTGCTGTGTGCTGGAGGGCACTACCAGATGGGGAGTCCAATGTGCTGATTGCTGCTAACAGTCAGGGTACAATTAAGGTGCTA GAATTGGTATGAAGGGTTAACTCAAGTCAAATTGTACTTGATCCTGCTGAAATACATCTGCAGCTGACAATGAGAGAAGAAACAGAAAAT GTCATGTGATGTCTCTCCCCAAAGTCATCATGGGTTTTGGATTTGTTTTGAATATTTTTTTCTTTTTTTCTTTTCCCTCCTTTATGACCT TTGGGACATTGGGAATACCCAGCCAACTCTCCACCATCAATGTAACTCCATGGACATTGCTGCTCTTGGTGGTGTTATCTAATTTTTGTG >In-frame_PBX1_ENST00000367897_chr1_164532548_+_RFWD2_ENST00000308769_chr1_175958615_-_732nt ATGGACGAGCAGCCCAGGCTGATGCATTCCCATGCTGGGGTCGGGATGGCCGGACACCCCGGCCTGTCCCAGCACTTGCAGGATGGGGCC GGAGGGACCGAGGGGGAGGGCGGGAGGAAGCAGGACATTGGAGACATTTTACAGCAAATTATGACCATCACAGACCAGAGTTTGGATGAG GCGCAGGCCAGAAAACATGCTTTAAACTGCCACAGAATGAAGCCTGCCTTGTTTAATGTGTTGTGTGAAATCAAAGAAAAAACAGATCAC TGTGTCCACTACTATGATCTTCGTAACACTAAACAGCCAATCATGGTATTCAAAGGACACCGTAAAGCAGTCTCTTATGCAAAGTTTGTG AGTGGTGAGGAAATTGTCTCTGCCTCAACAGACAGTCAGCTAAAACTGTGGAATGTAGGGAAACCATACTGCCTACGTTCCTTCAAGGGT CATATCAATGAAAAAAACTTTGTAGGCCTGGCTTCCAATGGAGATTATATAGCTTGTGGAAGTGAAAATAACTCTCTCTACCTGTACTAT AAAGGACTTTCTAAGACTTTGCTAACTTTTAAGTTTGATACAGTCAAAAGTGTTCTCGACAAAGACCGAAAAGAAGATGATACAAATGAA TTTGTTAGTGCTGTGTGCTGGAGGGCACTACCAGATGGGGAGTCCAATGTGCTGATTGCTGCTAACAGTCAGGGTACAATTAAGGTGCTA >In-frame_PBX1_ENST00000540236_chr1_164532548_+_RFWD2_ENST00000367669_chr1_175958615_-_1054nt ATGGACGAGCAGCCCAGGCTGATGCATTCCCATGCTGGGGTCGGGATGGCCGGACACCCCGGCCTGTCCCAGCACTTGCAGGATGGGGCC GGAGGGACCGAGGGGGAGGGCGGGAGGAAGCAGGACATTGGAGACATTTTACAGCAAATTATGACCATCACAGACCAGAGTTTGGATGAG GCGCAGGCCAGAAAACATGCTTTAAACTGCCACAGAATGAAGCCTGCCTTGTTTAATGTGTTGTGTGAAATCAAAGAAAAAACAGATCAC TGTGTCCACTACTATGATCTTCGTAACACTAAACAGCCAATCATGGTATTCAAAGGACACCGTAAAGCAGTCTCTTATGCAAAGTTTGTG AGTGGTGAGGAAATTGTCTCTGCCTCAACAGACAGTCAGCTAAAACTGTGGAATGTAGGGAAACCATACTGCCTACGTTCCTTCAAGGGT CATATCAATGAAAAAAACTTTGTAGGCCTGGCTTCCAATGGAGATTATATAGCTTGTGGAAGTGAAAATAACTCTCTCTACCTGTACTAT AAAGGACTTTCTAAGACTTTGCTAACTTTTAAGTTTGATACAGTCAAAAGTGTTCTCGACAAAGACCGAAAAGAAGATGATACAAATGAA TTTGTTAGTGCTGTGTGCTGGAGGGCACTACCAGATGGGGAGTCCAATGTGCTGATTGCTGCTAACAGTCAGGGTACAATTAAGGTGCTA GAATTGGTATGAAGGGTTAACTCAAGTCAAATTGTACTTGATCCTGCTGAAATACATCTGCAGCTGACAATGAGAGAAGAAACAGAAAAT GTCATGTGATGTCTCTCCCCAAAGTCATCATGGGTTTTGGATTTGTTTTGAATATTTTTTTCTTTTTTTCTTTTCCCTCCTTTATGACCT TTGGGACATTGGGAATACCCAGCCAACTCTCCACCATCAATGTAACTCCATGGACATTGCTGCTCTTGGTGGTGTTATCTAATTTTTGTG >In-frame_PBX1_ENST00000540236_chr1_164532548_+_RFWD2_ENST00000308769_chr1_175958615_-_732nt ATGGACGAGCAGCCCAGGCTGATGCATTCCCATGCTGGGGTCGGGATGGCCGGACACCCCGGCCTGTCCCAGCACTTGCAGGATGGGGCC GGAGGGACCGAGGGGGAGGGCGGGAGGAAGCAGGACATTGGAGACATTTTACAGCAAATTATGACCATCACAGACCAGAGTTTGGATGAG GCGCAGGCCAGAAAACATGCTTTAAACTGCCACAGAATGAAGCCTGCCTTGTTTAATGTGTTGTGTGAAATCAAAGAAAAAACAGATCAC TGTGTCCACTACTATGATCTTCGTAACACTAAACAGCCAATCATGGTATTCAAAGGACACCGTAAAGCAGTCTCTTATGCAAAGTTTGTG AGTGGTGAGGAAATTGTCTCTGCCTCAACAGACAGTCAGCTAAAACTGTGGAATGTAGGGAAACCATACTGCCTACGTTCCTTCAAGGGT CATATCAATGAAAAAAACTTTGTAGGCCTGGCTTCCAATGGAGATTATATAGCTTGTGGAAGTGAAAATAACTCTCTCTACCTGTACTAT AAAGGACTTTCTAAGACTTTGCTAACTTTTAAGTTTGATACAGTCAAAAGTGTTCTCGACAAAGACCGAAAAGAAGATGATACAAATGAA TTTGTTAGTGCTGTGTGCTGGAGGGCACTACCAGATGGGGAGTCCAATGTGCTGATTGCTGCTAACAGTCAGGGTACAATTAAGGTGCTA |
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FusionGenePPI for PBX1_RFWD2 |
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Hgene | Hgene's interactors | Tgene | Tgene's interactors |
PBX1 | MYH10, HOXB7, MEIS1, HOXA9, HOXD4, HOXD9, PKNOX1, HOXB1, HOXB8, NR3C1, MYOD1, MEIS2, HOXA10, SMARCA4, HDAC1, HDAC3, SIN3B, POU2F1, CREBBP, PDX1, ELAVL1, NEDD4L, HOXC8, KAT2A, MDM2, UCHL3, SMARCD3, LMX1B, MAGEA1, MAB21L1, MAB21L2, RBPJ, FOXA1, FOXC1, FOXE1, FOXQ1, TRAF1, FAM222A, VWA5A, C5orf24, CCDC120, C16orf71, ESR1 | RFWD2 | DET1, DDB1, CUL4A, RBX1, JUN, RFWD2, JUND, FOXO1, CRTC2, TP53, HSPA8, HSPA6, HSPA2, CCT3, TCP1, CCT6A, CCT5, CCT8, CCT7, CCT4, CCT2, CUL4B, WDR5, COPS2, COPS8, ETV5, ETV1, ETV4, MDM2, MDM4, RCHY1, YWHAZ, YWHAB, TRIB3, ELAVL1, MVP, CUL3, LRR1, DDA1, COPS3, COPS4, COPS5, COPS6, COPS7A, COPS7B, CUL1, SKP1, CUL2, TCEB2, BTBD2, KLHL42, DDB2, ERCC8, VPRBP, DCAF11, UBE2D2, PTPN11, REG1A, RB1CC1, SFN, UBE2D1, PTPN1, PARP4, TRIB1, JUNB, ETS2, ETS1, TRIB2, ZNF397, DMC1, FOSL2, FOS, STK40, CDKN1B, ATF6, STAT3, SEPSECS, SPOP, FAM120B, PPP2R2D, AGGF1, TAX1BP1, JPH1, TSKS, NFIL3, PPP2CA, CEP164, KHDRBS2, TINAG, CCT6B, ZNF263, PNPLA2, TRIM25 |
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Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Still interaction with |
Tgene | RFWD2 | chr1:164532548 | chr1:175958615 | ENST00000308769 | - | 13 | 19 | 643_645 | 552 | 708 | TRIB1 |
Tgene | RFWD2 | chr1:164532548 | chr1:175958615 | ENST00000367669 | - | 14 | 20 | 643_645 | 576 | 732 | TRIB1 |
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Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Interaction lost with |
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Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Interaction lost with |
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RelatedDrugs for PBX1_RFWD2 |
![]() (DrugBank Version 5.1.0 2018-04-02) |
Partner | Gene | UniProtAcc | DrugBank ID | Drug name | Drug activity | Drug type | Drug status |
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RelatedDiseases for PBX1_RFWD2 |
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Partner | Gene | Disease ID | Disease name | # pubmeds | Source |
Hgene | PBX1 | C0006413 | Burkitt Lymphoma | 2 | CTD_human |
Hgene | PBX1 | C0236969 | Substance-Related Disorders | 1 | CTD_human |