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Fusion gene ID: 25617 |
FusionGeneSummary for OTUB1_GBA |
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Fusion gene information | Fusion gene name: OTUB1_GBA | Fusion gene ID: 25617 | Hgene | Tgene | Gene symbol | OTUB1 | GBA | Gene ID | 55611 | 2629 |
Gene name | OTU deubiquitinase, ubiquitin aldehyde binding 1 | glucosylceramidase beta | |
Synonyms | HSPC263|OTB1|OTU1 | GBA1|GCB|GLUC | |
Cytomap | 11q13.1 | 1q22 | |
Type of gene | protein-coding | protein-coding | |
Description | ubiquitin thioesterase OTUB1OTU domain, ubiquitin aldehyde binding 1OTU domain-containing ubiquitin aldehyde-binding protein 1OTU-domain Ubal-binding 1deubiquitinating enzyme OTUB1otubain-1ubiquitin-specific protease otubain 1ubiquitin-specific-pro | glucosylceramidaseD-glucosyl-N-acylsphingosine glucohydrolaseacid beta-glucosidasealglucerasebeta-GCbeta-glucocerebrosidaseglucosidase, beta, acidglucosylceramidase-like proteinimigluceraselysosomal glucocerebrosidase | |
Modification date | 20180523 | 20180527 | |
UniProtAcc | Q96FW1 | P04062 | |
Ensembl transtripts involved in fusion gene | ENST00000541478, ENST00000535715, ENST00000422031, ENST00000428192, ENST00000538426, ENST00000543004, ENST00000536443, ENST00000543988, | ENST00000368373, ENST00000327247, ENST00000427500, ENST00000536770, ENST00000428024, ENST00000493842, | |
Fusion gene scores | * DoF score | 5 X 4 X 4=80 | 4 X 3 X 4=48 |
# samples | 5 | 4 | |
** MAII score | log2(5/80*10)=-0.678071905112638 possibly effective Gene in Pan-Cancer Fusion Genes (peGinPCFGs). DoF>8 and MAII<0 | log2(4/48*10)=-0.263034405833794 possibly effective Gene in Pan-Cancer Fusion Genes (peGinPCFGs). DoF>8 and MAII<0 | |
Context | PubMed: OTUB1 [Title/Abstract] AND GBA [Title/Abstract] AND fusion [Title/Abstract] | ||
Functional or gene categories assigned by FusionGDB annotation |
* DoF score (Degree of Frequency) = # partners X # break points X # cancer types ** MAII score (Major Active Isofusion Index) = log2(# samples/DoF score*10) |
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Partner | Gene | GO ID | GO term | PubMed ID |
Hgene | OTUB1 | GO:0006974 | cellular response to DNA damage stimulus | 20725033 |
Hgene | OTUB1 | GO:0071108 | protein K48-linked deubiquitination | 18954305|19211026|23827681 |
Hgene | OTUB1 | GO:1901315 | negative regulation of histone H2A K63-linked ubiquitination | 20725033 |
Tgene | GBA | GO:0032463 | negative regulation of protein homooligomerization | 26392287 |
Tgene | GBA | GO:0032715 | negative regulation of interleukin-6 production | 19279008 |
Tgene | GBA | GO:0043243 | positive regulation of protein complex disassembly | 26392287 |
![]() (ChiTars (NAR, 2018), tumorfusions (NAR, 2018), Gao et al. (Cell, 2018)) * All genome coordinats were lifted-over on hg19. * Click on the break point to see the gene structure around the break point region using the UCSC Genome Browser. |
Data type | Source | Cancer type | Sample | Hgene | Hchr | Hbp | Hstrand | Tgene | Tchr | Tbp | Tstrand |
TCGA | LD | HNSC | TCGA-D6-8568-01A | OTUB1 | chr11 | 63768992 | + | GBA | chr1 | 155208441 | - |
* LD: Li Ding group's fusion gene list RV: Roel Verhaak group's fusion gene list ChiTaRs fusion database |
![]() * Click on the break point to see the gene structure around the break point region using the UCSC Genome Browser. |
ORF | Henst | Tenst | Hgene | Hchr | Hbp | Hstrand | Tgene | Tchr | Tbp | Tstrand |
intron-3CDS | ENST00000541478 | ENST00000368373 | OTUB1 | chr11 | 63768992 | + | GBA | chr1 | 155208441 | - |
intron-3CDS | ENST00000541478 | ENST00000327247 | OTUB1 | chr11 | 63768992 | + | GBA | chr1 | 155208441 | - |
intron-3CDS | ENST00000541478 | ENST00000427500 | OTUB1 | chr11 | 63768992 | + | GBA | chr1 | 155208441 | - |
intron-3CDS | ENST00000541478 | ENST00000536770 | OTUB1 | chr11 | 63768992 | + | GBA | chr1 | 155208441 | - |
intron-3CDS | ENST00000541478 | ENST00000428024 | OTUB1 | chr11 | 63768992 | + | GBA | chr1 | 155208441 | - |
intron-5UTR | ENST00000541478 | ENST00000493842 | OTUB1 | chr11 | 63768992 | + | GBA | chr1 | 155208441 | - |
Frame-shift | ENST00000535715 | ENST00000368373 | OTUB1 | chr11 | 63768992 | + | GBA | chr1 | 155208441 | - |
Frame-shift | ENST00000535715 | ENST00000327247 | OTUB1 | chr11 | 63768992 | + | GBA | chr1 | 155208441 | - |
Frame-shift | ENST00000535715 | ENST00000427500 | OTUB1 | chr11 | 63768992 | + | GBA | chr1 | 155208441 | - |
Frame-shift | ENST00000535715 | ENST00000536770 | OTUB1 | chr11 | 63768992 | + | GBA | chr1 | 155208441 | - |
Frame-shift | ENST00000535715 | ENST00000428024 | OTUB1 | chr11 | 63768992 | + | GBA | chr1 | 155208441 | - |
5CDS-5UTR | ENST00000535715 | ENST00000493842 | OTUB1 | chr11 | 63768992 | + | GBA | chr1 | 155208441 | - |
intron-3CDS | ENST00000422031 | ENST00000368373 | OTUB1 | chr11 | 63768992 | + | GBA | chr1 | 155208441 | - |
intron-3CDS | ENST00000422031 | ENST00000327247 | OTUB1 | chr11 | 63768992 | + | GBA | chr1 | 155208441 | - |
intron-3CDS | ENST00000422031 | ENST00000427500 | OTUB1 | chr11 | 63768992 | + | GBA | chr1 | 155208441 | - |
intron-3CDS | ENST00000422031 | ENST00000536770 | OTUB1 | chr11 | 63768992 | + | GBA | chr1 | 155208441 | - |
intron-3CDS | ENST00000422031 | ENST00000428024 | OTUB1 | chr11 | 63768992 | + | GBA | chr1 | 155208441 | - |
intron-5UTR | ENST00000422031 | ENST00000493842 | OTUB1 | chr11 | 63768992 | + | GBA | chr1 | 155208441 | - |
intron-3CDS | ENST00000428192 | ENST00000368373 | OTUB1 | chr11 | 63768992 | + | GBA | chr1 | 155208441 | - |
intron-3CDS | ENST00000428192 | ENST00000327247 | OTUB1 | chr11 | 63768992 | + | GBA | chr1 | 155208441 | - |
intron-3CDS | ENST00000428192 | ENST00000427500 | OTUB1 | chr11 | 63768992 | + | GBA | chr1 | 155208441 | - |
intron-3CDS | ENST00000428192 | ENST00000536770 | OTUB1 | chr11 | 63768992 | + | GBA | chr1 | 155208441 | - |
intron-3CDS | ENST00000428192 | ENST00000428024 | OTUB1 | chr11 | 63768992 | + | GBA | chr1 | 155208441 | - |
intron-5UTR | ENST00000428192 | ENST00000493842 | OTUB1 | chr11 | 63768992 | + | GBA | chr1 | 155208441 | - |
intron-3CDS | ENST00000538426 | ENST00000368373 | OTUB1 | chr11 | 63768992 | + | GBA | chr1 | 155208441 | - |
intron-3CDS | ENST00000538426 | ENST00000327247 | OTUB1 | chr11 | 63768992 | + | GBA | chr1 | 155208441 | - |
intron-3CDS | ENST00000538426 | ENST00000427500 | OTUB1 | chr11 | 63768992 | + | GBA | chr1 | 155208441 | - |
intron-3CDS | ENST00000538426 | ENST00000536770 | OTUB1 | chr11 | 63768992 | + | GBA | chr1 | 155208441 | - |
intron-3CDS | ENST00000538426 | ENST00000428024 | OTUB1 | chr11 | 63768992 | + | GBA | chr1 | 155208441 | - |
intron-5UTR | ENST00000538426 | ENST00000493842 | OTUB1 | chr11 | 63768992 | + | GBA | chr1 | 155208441 | - |
intron-3CDS | ENST00000543004 | ENST00000368373 | OTUB1 | chr11 | 63768992 | + | GBA | chr1 | 155208441 | - |
intron-3CDS | ENST00000543004 | ENST00000327247 | OTUB1 | chr11 | 63768992 | + | GBA | chr1 | 155208441 | - |
intron-3CDS | ENST00000543004 | ENST00000427500 | OTUB1 | chr11 | 63768992 | + | GBA | chr1 | 155208441 | - |
intron-3CDS | ENST00000543004 | ENST00000536770 | OTUB1 | chr11 | 63768992 | + | GBA | chr1 | 155208441 | - |
intron-3CDS | ENST00000543004 | ENST00000428024 | OTUB1 | chr11 | 63768992 | + | GBA | chr1 | 155208441 | - |
intron-5UTR | ENST00000543004 | ENST00000493842 | OTUB1 | chr11 | 63768992 | + | GBA | chr1 | 155208441 | - |
intron-3CDS | ENST00000536443 | ENST00000368373 | OTUB1 | chr11 | 63768992 | + | GBA | chr1 | 155208441 | - |
intron-3CDS | ENST00000536443 | ENST00000327247 | OTUB1 | chr11 | 63768992 | + | GBA | chr1 | 155208441 | - |
intron-3CDS | ENST00000536443 | ENST00000427500 | OTUB1 | chr11 | 63768992 | + | GBA | chr1 | 155208441 | - |
intron-3CDS | ENST00000536443 | ENST00000536770 | OTUB1 | chr11 | 63768992 | + | GBA | chr1 | 155208441 | - |
intron-3CDS | ENST00000536443 | ENST00000428024 | OTUB1 | chr11 | 63768992 | + | GBA | chr1 | 155208441 | - |
intron-5UTR | ENST00000536443 | ENST00000493842 | OTUB1 | chr11 | 63768992 | + | GBA | chr1 | 155208441 | - |
intron-3CDS | ENST00000543988 | ENST00000368373 | OTUB1 | chr11 | 63768992 | + | GBA | chr1 | 155208441 | - |
intron-3CDS | ENST00000543988 | ENST00000327247 | OTUB1 | chr11 | 63768992 | + | GBA | chr1 | 155208441 | - |
intron-3CDS | ENST00000543988 | ENST00000427500 | OTUB1 | chr11 | 63768992 | + | GBA | chr1 | 155208441 | - |
intron-3CDS | ENST00000543988 | ENST00000536770 | OTUB1 | chr11 | 63768992 | + | GBA | chr1 | 155208441 | - |
intron-3CDS | ENST00000543988 | ENST00000428024 | OTUB1 | chr11 | 63768992 | + | GBA | chr1 | 155208441 | - |
intron-5UTR | ENST00000543988 | ENST00000493842 | OTUB1 | chr11 | 63768992 | + | GBA | chr1 | 155208441 | - |
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FusionProtFeatures for OTUB1_GBA |
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Hgene | Tgene |
OTUB1 | GBA |
Hydrolase that can specifically remove 'Lys-48'-linkedconjugated ubiquitin from proteins and plays an importantregulatory role at the level of protein turnover by preventingdegradation. Regulator of T-cell anergy, a phenomenon that occurswhen T-cells are rendered unresponsive to antigen rechallenge andno longer respond to their cognate antigen. Acts via itsinteraction with RNF128/GRAIL, a crucial inductor of CD4 T-cellanergy. Isoform 1 destabilizes RNF128, leading to prevent anergy.In contrast, isoform 2 stabilizes RNF128 and promotes anergy.Surprisingly, it regulates RNF128-mediated ubiquitination, butdoes not deubiquitinate polyubiquitinated RNF128. Deubiquitinatesestrogen receptor alpha (ESR1). Mediates deubiquitination of 'Lys-48'-linked polyubiquitin chains, but not 'Lys-63'-linkedpolyubiquitin chains. Not able to cleave di-ubiquitin. Alsocapable of removing NEDD8 from NEDD8 conjugates, but with a muchlower preference compared to 'Lys-48'-linked ubiquitin. Plays a key non-catalytic role in DNA repair regulationby inhibiting activity of RNF168, an E3 ubiquitin-protein ligasethat promotes accumulation of 'Lys-63'-linked histone H2A and H2AXat DNA damage sites. Inhibits RNF168 independently of ubiquitinthioesterase activity by binding and inhibiting UBE2N/UBC13, theE2 partner of RNF168, thereby limiting spreading of 'Lys-63'-linked histone H2A and H2AX marks. Inhibition occurs by binding tofree ubiquitin: free ubiquitin acts as an allosteric regulatorthat increases affinity for UBE2N/UBC13 and disrupts interactionwith UBE2V1. The OTUB1-UBE2N/UBC13-free ubiquitin complex adopts aconfiguration that mimics a cleaved 'Lys48'-linked di-ubiquitinchain. |
![]() * Minus value of BPloci means that the break pointn is located before the CDS. |
- In-frame and retained protein feature among the 13 regional features. |
Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Protein feature | Protein feature note |
- In-frame and not-retained protein feature among the 13 regional features. |
Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Protein feature | Protein feature note |
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FusionGeneSequence for OTUB1_GBA |
![]() (nt: nucleotides, aa: amino acids) |
* Fusion amino acid sequences. |
* Fusion transcript sequences (only coding sequence (CDS) region). |
* Fusion transcript sequences (Full-length transcript). |
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FusionGenePPI for OTUB1_GBA |
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Hgene | Hgene's interactors | Tgene | Tgene's interactors |
OTUB1 | RNF128, USP8, DDX5, GNB2L1, NPM1, EBNA1BP2, EIF4A3, DDX54, DDX23, PCNA, NAT10, DDX24, FUS, MSH2, UBE2D2, UBE2N, STAMBP, CASP14, CPNE7, OTUD6B, STAMBPL1, UBC, RHOA, TRAF3, TRAF6, MAVS, ESR1, TP53, UBE2D1, H2AFX, ANXA1, CDKN1A, TTR, ANXA7, TSC22D1, UBE2S, UBE2V2, RFFL, PJA1, TRIM63, TRIM55, TRIM54, USP21, USP15, USP28, DSTN, ECT2, RNF126, ACTB, SMAD9, BIRC2, BIRC3, TNFSF12, SMAD2, SMAD3, SMAD4, KDM1A, NMRAL1, ERN1, UBE2D3, UBE2D4, RNF2, NEDD8, NFKBIA, CYP1A1, CSNK2A1, ACVR1, BMPR1A, ACVR1B, TGFBR1, BMPR1B, SERBP1, VPS29, NTRK1, EWSR1, FOXM1, AURKA, HIF1AN, MAZ, RCC1, CCNB1, SRPRB, YTHDF2, LUC7L2, NOSIP, NUDC, RPL26L1, MAGED2, STUB1, ZBTB21, SLC25A13, CHORDC1, RCC2, QPCTL, FARSB, TOMM22, OSGEP, MCCC2, UBTD1, CXorf56, ILKAP, C19orf43, DNAJC7, UBE2E2, USMG5, ZC3HAV1L, KCTD12, FAM136A, UBE2W, UBE2E3, CKAP2, C2orf47, SNRNP27, RP9, ABCF1, PNKD, NUP93, ABCF2, SLC27A4, UBL4A, AGK, HSD17B12, IMMT, TCEB1, PCBP1, PPA1, KARS, NOLC1, LAGE3, PIN1, AIMP2, TARDBP, PRDX1, CALD1, SLC25A11, SLC25A3, UBE2L3, UBE2G2, SEC61B, MTPN, CSE1L, SLC16A1, SLC25A1, UBE2E1, SSR4, SRP9, GCLM, BAG6, CRKL, RANBP1, TXLNA, HSPA9, GPX4, ATP5C1, BSG, CBS, HSPA4, PRDX2, DNAJA1, SDHA, PRDX5, ERP29, MPG, MAPK1, CAD, RRM1, TCEA1, SDHB, CTPS1, HSPA6, CBR1, HSPA8, HSPA5, TXN, ASNS, SLC3A2, HSPA1A, UQCRH, SLC25A5, COL1A1, AIFM1, BAG2, TDP2, UTS2, IKBKAP, CTNND1, IDH3B, ASNA1, PHGDH, PFAS, IRS4, NDUFA4, PGRMC1, SLIT3, FLYWCH2, RFX7, PFN2, CSRP2, VDAC3, MAP4, ADSL, EPM2A, ARCN1, PRSS38, SSH3, ZNF746, DUSP13, DUSP8, USP47, FGB, DLD, HSD17B10, IL1RL2 | GBA | NEDD4, HSP90AA1, HSPA4, TCP1, PARK2, CBL, FBXO6, SNCA, ATP6V1B1, ITCH, NUDCD1, PCBP2, NTRK1, ATP5J, CANX, DHCR24, FMR1, HSPD1, RPS6KA3, HSP90B1, CCT3, TOP3B, SCAMP3, INADL, HYOU1, CCT8, ZMYND11, B4GALT7, SKIV2L2, IMP3, BMP2K, ZCCHC8, FGD6, RNF20, JPH1, ZFP91, RAB27B, HCCS, COMT, RAB14, RAB21, POMK, ARL8B, RDH11, ESYT1 |
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Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Still interaction with |
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Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Interaction lost with |
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Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Interaction lost with |
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RelatedDrugs for OTUB1_GBA |
![]() (DrugBank Version 5.1.0 2018-04-02) |
Partner | Gene | UniProtAcc | DrugBank ID | Drug name | Drug activity | Drug type | Drug status |
Tgene | GBA | P04062 | DB06720 | Velaglucerase alfa | Glucosylceramidase | biotech | approved|investigational |
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RelatedDiseases for OTUB1_GBA |
![]() (DisGeNet 4.0) |
Partner | Gene | Disease ID | Disease name | # pubmeds | Source |
Tgene | GBA | C1961835 | Gaucher Disease, Type 1 | 40 | ORPHANET;UNIPROT |
Tgene | GBA | C0268250 | Gaucher Disease, Type 2 (disorder) | 12 | ORPHANET;UNIPROT |
Tgene | GBA | C0017205 | Gaucher Disease | 5 | CTD_human |
Tgene | GBA | C0030567 | Parkinson Disease | 2 | CTD_human |
Tgene | GBA | C0020542 | Pulmonary Hypertension | 1 | CTD_human;HPO |
Tgene | GBA | C0242422 | Parkinsonian Disorders | 1 | CTD_human |
Tgene | GBA | C0268251 | Gaucher Disease, Type 3 (disorder) | 1 | ORPHANET;UNIPROT |
Tgene | GBA | C0752347 | Lewy Body Disease | 1 | CTD_human |