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Fusion gene ID: 25518 |
FusionGeneSummary for OSBPL10_CNN3 |
 Fusion gene summary |
| Fusion gene information | Fusion gene name: OSBPL10_CNN3 | Fusion gene ID: 25518 | Hgene | Tgene | Gene symbol | OSBPL10 | CNN3 | Gene ID | 114884 | 1266 |
| Gene name | oxysterol binding protein like 10 | calponin 3 | |
| Synonyms | ORP10|OSBP9 | - | |
| Cytomap | 3p23 | 1p21.3 | |
| Type of gene | protein-coding | protein-coding | |
| Description | oxysterol-binding protein-related protein 10ORP-10OSBP-related protein 10 | calponin-3calponin 3, acidiccalponin, acidic isoformdJ639P13.2.2 (acidic calponin 3) | |
| Modification date | 20180523 | 20180522 | |
| UniProtAcc | Q9BXB5 | Q15417 | |
| Ensembl transtripts involved in fusion gene | ENST00000396556, ENST00000438237, ENST00000467647, | ENST00000370206, ENST00000538964, ENST00000394202, ENST00000545882, ENST00000487539, | |
| Fusion gene scores | * DoF score | 7 X 5 X 4=140 | 2 X 4 X 2=16 |
| # samples | 7 | 5 | |
| ** MAII score | log2(7/140*10)=-1 possibly effective Gene in Pan-Cancer Fusion Genes (peGinPCFGs). DoF>8 and MAII<0 | log2(5/16*10)=1.64385618977472 effective Gene in Pan-Cancer Fusion Genes (eGinPCFGs). DoF>8 and MAII>0 | |
| Context | PubMed: OSBPL10 [Title/Abstract] AND CNN3 [Title/Abstract] AND fusion [Title/Abstract] | ||
| Functional or gene categories assigned by FusionGDB annotation | |||
| * DoF score (Degree of Frequency) = # partners X # break points X # cancer types ** MAII score (Major Active Isofusion Index) = log2(# samples/DoF score*10) |
| Gene ontology of each fusion partner gene with evidence of Inferred from Direct Assay (IDA) from Entrez |
| Partner | Gene | GO ID | GO term | PubMed ID |
| Fusion gene information from three resources (ChiTars (NAR, 2018), tumorfusions (NAR, 2018), Gao et al. (Cell, 2018)) * All genome coordinats were lifted-over on hg19. * Click on the break point to see the gene structure around the break point region using the UCSC Genome Browser. |
| Data type | Source | Cancer type | Sample | Hgene | Hchr | Hbp | Hstrand | Tgene | Tchr | Tbp | Tstrand |
| TCGA | LD | LUSC | TCGA-68-8251-01A | OSBPL10 | chr3 | 31871532 | - | CNN3 | chr1 | 95369080 | - |
| * LD: Li Ding group's fusion gene list RV: Roel Verhaak group's fusion gene list ChiTaRs fusion database |
| Open reading frame (ORF) analsis of fusion genes based on Ensembl gene isoform structure. * Click on the break point to see the gene structure around the break point region using the UCSC Genome Browser. |
| ORF | Henst | Tenst | Hgene | Hchr | Hbp | Hstrand | Tgene | Tchr | Tbp | Tstrand |
| In-frame | ENST00000396556 | ENST00000370206 | OSBPL10 | chr3 | 31871532 | - | CNN3 | chr1 | 95369080 | - |
| In-frame | ENST00000396556 | ENST00000538964 | OSBPL10 | chr3 | 31871532 | - | CNN3 | chr1 | 95369080 | - |
| In-frame | ENST00000396556 | ENST00000394202 | OSBPL10 | chr3 | 31871532 | - | CNN3 | chr1 | 95369080 | - |
| 5CDS-5UTR | ENST00000396556 | ENST00000545882 | OSBPL10 | chr3 | 31871532 | - | CNN3 | chr1 | 95369080 | - |
| 5CDS-intron | ENST00000396556 | ENST00000487539 | OSBPL10 | chr3 | 31871532 | - | CNN3 | chr1 | 95369080 | - |
| intron-3CDS | ENST00000438237 | ENST00000370206 | OSBPL10 | chr3 | 31871532 | - | CNN3 | chr1 | 95369080 | - |
| intron-3CDS | ENST00000438237 | ENST00000538964 | OSBPL10 | chr3 | 31871532 | - | CNN3 | chr1 | 95369080 | - |
| intron-3CDS | ENST00000438237 | ENST00000394202 | OSBPL10 | chr3 | 31871532 | - | CNN3 | chr1 | 95369080 | - |
| intron-5UTR | ENST00000438237 | ENST00000545882 | OSBPL10 | chr3 | 31871532 | - | CNN3 | chr1 | 95369080 | - |
| intron-intron | ENST00000438237 | ENST00000487539 | OSBPL10 | chr3 | 31871532 | - | CNN3 | chr1 | 95369080 | - |
| 5UTR-3CDS | ENST00000467647 | ENST00000370206 | OSBPL10 | chr3 | 31871532 | - | CNN3 | chr1 | 95369080 | - |
| 5UTR-3CDS | ENST00000467647 | ENST00000538964 | OSBPL10 | chr3 | 31871532 | - | CNN3 | chr1 | 95369080 | - |
| 5UTR-3CDS | ENST00000467647 | ENST00000394202 | OSBPL10 | chr3 | 31871532 | - | CNN3 | chr1 | 95369080 | - |
| 5UTR-5UTR | ENST00000467647 | ENST00000545882 | OSBPL10 | chr3 | 31871532 | - | CNN3 | chr1 | 95369080 | - |
| 5UTR-intron | ENST00000467647 | ENST00000487539 | OSBPL10 | chr3 | 31871532 | - | CNN3 | chr1 | 95369080 | - |
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FusionProtFeatures for OSBPL10_CNN3 |
| Main function of each fusion partner protein. (from UniProt) |
| Hgene | Tgene |
| OSBPL10 | CNN3 |
| Probable lipid transporter involved in lipidcountertransport between the endoplasmic reticulum and the plasmamembrane. Its ability to bind phosphatidylserine, suggests that itspecifically exchanges phosphatidylserine withphosphatidylinositol 4-phosphate (PI4P), deliveringphosphatidylserine to the plasma membrane in exchange for PI4P(PubMed:23934110) (Probable). Plays a role in negative regulationof lipid biosynthesis (PubMed:19554302). Negatively regulates APOBsecretion from hepatocytes (PubMed:19554302, PubMed:22906437).Binds cholesterol and acidic phospholipids (PubMed:22906437). Alsobinds 25-hydroxycholesterol (PubMed:17428193). Bindsphosphatidylserine (PubMed:23934110).{ECO:0000269|PubMed:17428193, ECO:0000269|PubMed:19554302,ECO:0000269|PubMed:22906437, ECO:0000269|PubMed:23934110,ECO:0000305}. | Thin filament-associated protein that is implicated inthe regulation and modulation of smooth muscle contraction. It iscapable of binding to actin, calmodulin, troponin C andtropomyosin. The interaction of calponin with actin inhibits theactomyosin Mg-ATPase activity. |
| Retention analysis result of each fusion partner protein across 39 protein features of UniProt such as six molecule processing features, 13 region features, four site features, six amino acid modification features, two natural variation features, five experimental info features, and 3 secondary structure features. Here, because of limited space for viewing, we only show the protein feature retention information belong to the 13 regional features. All retention annotation result can be downloaded at . * Minus value of BPloci means that the break pointn is located before the CDS. |
| - In-frame and retained protein feature among the 13 regional features. |
| Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Protein feature | Protein feature note |
| Hgene | OSBPL10 | chr3:31871532 | chr1:95369080 | ENST00000396556 | - | 4 | 12 | 14_66 | 243 | 765 | Compositional bias | Ser-rich |
| Hgene | OSBPL10 | chr3:31871532 | chr1:95369080 | ENST00000396556 | - | 4 | 12 | 74_171 | 243 | 765 | Domain | PH |
| Tgene | >CNN3 | chr3:31871532 | chr1:95369080 | ENST00000370206 | - | 0 | 7 | 290_329 | 19 | 330 | Compositional bias | Note=Asp/Glu-rich (acidic) |
| Tgene | >CNN3 | chr3:31871532 | chr1:95369080 | ENST00000538964 | - | 1 | 8 | 290_329 | 19 | 330 | Compositional bias | Note=Asp/Glu-rich (acidic) |
| Tgene | >CNN3 | chr3:31871532 | chr1:95369080 | ENST00000370206 | - | 0 | 7 | 26_130 | 19 | 330 | Domain | Calponin-homology (CH) |
| Tgene | >CNN3 | chr3:31871532 | chr1:95369080 | ENST00000538964 | - | 1 | 8 | 26_130 | 19 | 330 | Domain | Calponin-homology (CH) |
| Tgene | >CNN3 | chr3:31871532 | chr1:95369080 | ENST00000370206 | - | 0 | 7 | 164_189 | 19 | 330 | Repeat | Note=Calponin-like 1 |
| Tgene | >CNN3 | chr3:31871532 | chr1:95369080 | ENST00000370206 | - | 0 | 7 | 204_229 | 19 | 330 | Repeat | Note=Calponin-like 2 |
| Tgene | >CNN3 | chr3:31871532 | chr1:95369080 | ENST00000370206 | - | 0 | 7 | 243_268 | 19 | 330 | Repeat | Note=Calponin-like 3 |
| Tgene | >CNN3 | chr3:31871532 | chr1:95369080 | ENST00000538964 | - | 1 | 8 | 164_189 | 19 | 330 | Repeat | Note=Calponin-like 1 |
| Tgene | >CNN3 | chr3:31871532 | chr1:95369080 | ENST00000538964 | - | 1 | 8 | 204_229 | 19 | 330 | Repeat | Note=Calponin-like 2 |
| Tgene | >CNN3 | chr3:31871532 | chr1:95369080 | ENST00000538964 | - | 1 | 8 | 243_268 | 19 | 330 | Repeat | Note=Calponin-like 3 |
| - In-frame and not-retained protein feature among the 13 regional features. |
| Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Protein feature | Protein feature note |
| Hgene | >OSBPL10 | chr3:31871532 | chr1:95369080 | ENST00000396556 | - | 4 | 12 | 713_740 | 243 | 765 | Coiled coil | Ontology_term=ECO:0000255 |
| Hgene | >OSBPL10 | chr3:31871532 | chr1:95369080 | ENST00000438237 | - | 1 | 11 | 713_740 | -41 | 701 | Coiled coil | Ontology_term=ECO:0000255 |
| Hgene | >OSBPL10 | chr3:31871532 | chr1:95369080 | ENST00000438237 | - | 1 | 11 | 14_66 | -41 | 701 | Compositional bias | Ser-rich |
| Hgene | >OSBPL10 | chr3:31871532 | chr1:95369080 | ENST00000438237 | - | 1 | 11 | 74_171 | -41 | 701 | Domain | PH |
| Hgene | >OSBPL10 | chr3:31871532 | chr1:95369080 | ENST00000396556 | - | 4 | 12 | 413_418 | 243 | 765 | Region | Phosphatidylserine binding |
| Hgene | >OSBPL10 | chr3:31871532 | chr1:95369080 | ENST00000396556 | - | 4 | 12 | 477_480 | 243 | 765 | Region | Phosphatidylinositol 4-phosphate binding |
| Hgene | >OSBPL10 | chr3:31871532 | chr1:95369080 | ENST00000396556 | - | 4 | 12 | 535_536 | 243 | 765 | Region | Phosphatidylinositol 4-phosphate binding |
| Hgene | >OSBPL10 | chr3:31871532 | chr1:95369080 | ENST00000438237 | - | 1 | 11 | 413_418 | -41 | 701 | Region | Phosphatidylserine binding |
| Hgene | >OSBPL10 | chr3:31871532 | chr1:95369080 | ENST00000438237 | - | 1 | 11 | 477_480 | -41 | 701 | Region | Phosphatidylinositol 4-phosphate binding |
| Hgene | >OSBPL10 | chr3:31871532 | chr1:95369080 | ENST00000438237 | - | 1 | 11 | 535_536 | -41 | 701 | Region | Phosphatidylinositol 4-phosphate binding |
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FusionGeneSequence for OSBPL10_CNN3 |
| For in-frame fusion transcripts, we provide the fusion transcript sequences and fusion amino acid sequences. (nt: nucleotides, aa: amino acids) |
| * Fusion amino acid sequences. |
| >In-frame_OSBPL10_ENST00000396556_chr3_31871532_-_CNN3_ENST00000370206_chr1_95369080_-_554aa MERAVQGTDGGGGSNSSSRSSSRATSAGSSPSCSLAGRGVSSRSAAAGLGGGGSRSSPGSVAASPSGGGGRRREPALEGVLSKYTNLLQG WQNRYFVLDFEAGILQYFVNEQSKHQKPRGVLSLSGAIVSLSDEAPHMLVVYSANGEMFKLRAADAKEKQFWVTQLRACAKYHMEMNSKS APSSRSRSLTLLPHGTPNSASPCSQRHLSVGAPGVVTITHHKSPAAARRAKSQYSGQLHEVREIASKYDHQAEEDLRNWIEEVTGMSIGP NFQLGLKDGIILCELINKLQPGSVKKVNESSLNWPQLENIGNFIKAIQAYGMKPHDIFEANDLFENGNMTQVQTTLVALAGLAKTKGFHT TIDIGVKYAEKQTRRFDEGKLKAGQSVIGLQMGTNKCASQAGMTAYGTRRHLYDPKMQTDKPFDQTTISLQMGTNKGASQAGMLAPGTRR DIYDQKLTLQPVDNSTISLQMGTNKVASQKGMSVYGLGRQVYDPKYCAAPTEPVIHNGSQGTGTNGSEISDSDYQAEYPDEYHGEYQDDY >In-frame_OSBPL10_ENST00000396556_chr3_31871532_-_CNN3_ENST00000538964_chr1_95369080_-_554aa MERAVQGTDGGGGSNSSSRSSSRATSAGSSPSCSLAGRGVSSRSAAAGLGGGGSRSSPGSVAASPSGGGGRRREPALEGVLSKYTNLLQG WQNRYFVLDFEAGILQYFVNEQSKHQKPRGVLSLSGAIVSLSDEAPHMLVVYSANGEMFKLRAADAKEKQFWVTQLRACAKYHMEMNSKS APSSRSRSLTLLPHGTPNSASPCSQRHLSVGAPGVVTITHHKSPAAARRAKSQYSGQLHEVREIASKYDHQAEEDLRNWIEEVTGMSIGP NFQLGLKDGIILCELINKLQPGSVKKVNESSLNWPQLENIGNFIKAIQAYGMKPHDIFEANDLFENGNMTQVQTTLVALAGLAKTKGFHT TIDIGVKYAEKQTRRFDEGKLKAGQSVIGLQMGTNKCASQAGMTAYGTRRHLYDPKMQTDKPFDQTTISLQMGTNKGASQAGMLAPGTRR DIYDQKLTLQPVDNSTISLQMGTNKVASQKGMSVYGLGRQVYDPKYCAAPTEPVIHNGSQGTGTNGSEISDSDYQAEYPDEYHGEYQDDY >In-frame_OSBPL10_ENST00000396556_chr3_31871532_-_CNN3_ENST00000394202_chr1_95369080_-_508aa MERAVQGTDGGGGSNSSSRSSSRATSAGSSPSCSLAGRGVSSRSAAAGLGGGGSRSSPGSVAASPSGGGGRRREPALEGVLSKYTNLLQG WQNRYFVLDFEAGILQYFVNEQSKHQKPRGVLSLSGAIVSLSDEAPHMLVVYSANGEMFKLRAADAKEKQFWVTQLRACAKYHMEMNSKS APSSRSRSLTLLPHGTPNSASPCSQRHLSVGAPGVVTITHHKSPAAARRAKSQYSGQLHEVREIASKYDHQAEEDLRNWIEEVTGMSIGP NFQLGLKDGIILCELINKLQPGSVKKVNESSLNWPQAKTKGFHTTIDIGVKYAEKQTRRFDEGKLKAGQSVIGLQMGTNKCASQAGMTAY GTRRHLYDPKMQTDKPFDQTTISLQMGTNKGASQAGMLAPGTRRDIYDQKLTLQPVDNSTISLQMGTNKVASQKGMSVYGLGRQVYDPKY |
| * Fusion transcript sequences (only coding sequence (CDS) region). |
| >In-frame_OSBPL10_ENST00000396556_chr3_31871532_-_CNN3_ENST00000370206_chr1_95369080_-_1662nt ATGGAGAGGGCAGTCCAGGGCACAGACGGCGGCGGGGGTAGCAACAGCAGCAGCCGCAGCAGCAGCCGTGCTACCTCGGCGGGCTCCTCG CCCTCCTGCTCTCTGGCGGGCCGGGGGGTCTCCAGCCGGTCGGCGGCGGCCGGGCTCGGCGGCGGGGGAAGCCGCAGCAGCCCGGGCTCT GTGGCCGCTAGCCCGTCCGGGGGAGGCGGCCGCAGGAGGGAGCCGGCGCTCGAGGGCGTGCTCAGCAAATACACCAACCTCCTCCAGGGC TGGCAGAACAGGTACTTCGTACTGGATTTCGAGGCTGGCATCCTGCAGTATTTTGTGAATGAGCAAAGCAAACACCAGAAGCCTCGAGGA GTCCTGTCTTTATCTGGAGCCATAGTGTCCCTGAGCGATGAAGCTCCCCACATGCTGGTGGTGTACTCTGCTAATGGAGAGATGTTTAAA CTGAGAGCTGCTGATGCAAAAGAGAAACAATTCTGGGTGACTCAGCTTCGAGCTTGTGCCAAATACCACATGGAAATGAATTCTAAGAGT GCTCCAAGCTCCCGAAGCCGAAGTCTCACTTTGCTCCCACATGGAACACCCAATTCTGCGTCTCCCTGTAGCCAGAGACACCTCAGTGTG GGGGCCCCCGGTGTTGTCACAATCACGCATCACAAGTCGCCTGCAGCCGCCCGAAGAGCCAAGAGTCAGTATTCCGGCCAGCTTCACGAA GTCAGAGAGATTGCTTCCAAGTATGATCATCAGGCAGAAGAAGATCTTCGCAATTGGATAGAAGAGGTGACAGGCATGAGCATTGGCCCC AACTTCCAGCTGGGCTTAAAGGATGGCATCATCCTCTGCGAACTTATAAACAAGCTACAGCCAGGCTCAGTGAAGAAGGTCAACGAGTCC TCACTGAACTGGCCTCAGTTGGAGAATATTGGCAACTTTATTAAAGCTATTCAGGCTTATGGTATGAAGCCACATGACATATTCGAAGCA AATGATCTTTTTGAGAATGGAAACATGACCCAGGTTCAGACTACTCTGGTGGCTCTAGCAGGTCTGGCTAAAACAAAAGGATTCCATACA ACCATTGACATTGGAGTTAAGTATGCAGAAAAACAAACAAGACGTTTTGATGAAGGAAAATTAAAAGCTGGCCAAAGTGTAATTGGTCTG CAGATGGGAACCAACAAATGTGCCAGCCAGGCAGGTATGACAGCTTACGGGACTAGGAGGCATCTTTATGATCCCAAAATGCAAACTGAC AAACCTTTTGACCAGACCACAATTAGTCTGCAGATGGGCACTAATAAAGGAGCCAGCCAGGCAGGGATGTTAGCACCAGGTACCAGAAGA GACATCTATGATCAGAAGCTAACATTACAGCCGGTGGACAACTCGACAATTTCCCTACAGATGGGTACCAACAAAGTTGCTTCCCAGAAA GGAATGAGTGTGTATGGGCTTGGGCGGCAAGTATATGATCCCAAATACTGTGCTGCTCCTACAGAACCTGTCATTCACAACGGAAGCCAA GGAACAGGAACAAATGGTTCGGAAATCAGTGATAGTGATTATCAGGCAGAATACCCTGATGAGTATCATGGCGAGTACCAGGATGACTAC >In-frame_OSBPL10_ENST00000396556_chr3_31871532_-_CNN3_ENST00000538964_chr1_95369080_-_1662nt ATGGAGAGGGCAGTCCAGGGCACAGACGGCGGCGGGGGTAGCAACAGCAGCAGCCGCAGCAGCAGCCGTGCTACCTCGGCGGGCTCCTCG CCCTCCTGCTCTCTGGCGGGCCGGGGGGTCTCCAGCCGGTCGGCGGCGGCCGGGCTCGGCGGCGGGGGAAGCCGCAGCAGCCCGGGCTCT GTGGCCGCTAGCCCGTCCGGGGGAGGCGGCCGCAGGAGGGAGCCGGCGCTCGAGGGCGTGCTCAGCAAATACACCAACCTCCTCCAGGGC TGGCAGAACAGGTACTTCGTACTGGATTTCGAGGCTGGCATCCTGCAGTATTTTGTGAATGAGCAAAGCAAACACCAGAAGCCTCGAGGA GTCCTGTCTTTATCTGGAGCCATAGTGTCCCTGAGCGATGAAGCTCCCCACATGCTGGTGGTGTACTCTGCTAATGGAGAGATGTTTAAA CTGAGAGCTGCTGATGCAAAAGAGAAACAATTCTGGGTGACTCAGCTTCGAGCTTGTGCCAAATACCACATGGAAATGAATTCTAAGAGT GCTCCAAGCTCCCGAAGCCGAAGTCTCACTTTGCTCCCACATGGAACACCCAATTCTGCGTCTCCCTGTAGCCAGAGACACCTCAGTGTG GGGGCCCCCGGTGTTGTCACAATCACGCATCACAAGTCGCCTGCAGCCGCCCGAAGAGCCAAGAGTCAGTATTCCGGCCAGCTTCACGAA GTCAGAGAGATTGCTTCCAAGTATGATCATCAGGCAGAAGAAGATCTTCGCAATTGGATAGAAGAGGTGACAGGCATGAGCATTGGCCCC AACTTCCAGCTGGGCTTAAAGGATGGCATCATCCTCTGCGAACTTATAAACAAGCTACAGCCAGGCTCAGTGAAGAAGGTCAACGAGTCC TCACTGAACTGGCCTCAGTTGGAGAATATTGGCAACTTTATTAAAGCTATTCAGGCTTATGGTATGAAGCCACATGACATATTCGAAGCA AATGATCTTTTTGAGAATGGAAACATGACCCAGGTTCAGACTACTCTGGTGGCTCTAGCAGGTCTGGCTAAAACAAAAGGATTCCATACA ACCATTGACATTGGAGTTAAGTATGCAGAAAAACAAACAAGACGTTTTGATGAAGGAAAATTAAAAGCTGGCCAAAGTGTAATTGGTCTG CAGATGGGAACCAACAAATGTGCCAGCCAGGCAGGTATGACAGCTTACGGGACTAGGAGGCATCTTTATGATCCCAAAATGCAAACTGAC AAACCTTTTGACCAGACCACAATTAGTCTGCAGATGGGCACTAATAAAGGAGCCAGCCAGGCAGGGATGTTAGCACCAGGTACCAGAAGA GACATCTATGATCAGAAGCTAACATTACAGCCGGTGGACAACTCGACAATTTCCCTACAGATGGGTACCAACAAAGTTGCTTCCCAGAAA GGAATGAGTGTGTATGGGCTTGGGCGGCAAGTATATGATCCCAAATACTGTGCTGCTCCTACAGAACCTGTCATTCACAACGGAAGCCAA GGAACAGGAACAAATGGTTCGGAAATCAGTGATAGTGATTATCAGGCAGAATACCCTGATGAGTATCATGGCGAGTACCAGGATGACTAC >In-frame_OSBPL10_ENST00000396556_chr3_31871532_-_CNN3_ENST00000394202_chr1_95369080_-_1524nt ATGGAGAGGGCAGTCCAGGGCACAGACGGCGGCGGGGGTAGCAACAGCAGCAGCCGCAGCAGCAGCCGTGCTACCTCGGCGGGCTCCTCG CCCTCCTGCTCTCTGGCGGGCCGGGGGGTCTCCAGCCGGTCGGCGGCGGCCGGGCTCGGCGGCGGGGGAAGCCGCAGCAGCCCGGGCTCT GTGGCCGCTAGCCCGTCCGGGGGAGGCGGCCGCAGGAGGGAGCCGGCGCTCGAGGGCGTGCTCAGCAAATACACCAACCTCCTCCAGGGC TGGCAGAACAGGTACTTCGTACTGGATTTCGAGGCTGGCATCCTGCAGTATTTTGTGAATGAGCAAAGCAAACACCAGAAGCCTCGAGGA GTCCTGTCTTTATCTGGAGCCATAGTGTCCCTGAGCGATGAAGCTCCCCACATGCTGGTGGTGTACTCTGCTAATGGAGAGATGTTTAAA CTGAGAGCTGCTGATGCAAAAGAGAAACAATTCTGGGTGACTCAGCTTCGAGCTTGTGCCAAATACCACATGGAAATGAATTCTAAGAGT GCTCCAAGCTCCCGAAGCCGAAGTCTCACTTTGCTCCCACATGGAACACCCAATTCTGCGTCTCCCTGTAGCCAGAGACACCTCAGTGTG GGGGCCCCCGGTGTTGTCACAATCACGCATCACAAGTCGCCTGCAGCCGCCCGAAGAGCCAAGAGTCAGTATTCCGGCCAGCTTCACGAA GTCAGAGAGATTGCTTCCAAGTATGATCATCAGGCAGAAGAAGATCTTCGCAATTGGATAGAAGAGGTGACAGGCATGAGCATTGGCCCC AACTTCCAGCTGGGCTTAAAGGATGGCATCATCCTCTGCGAACTTATAAACAAGCTACAGCCAGGCTCAGTGAAGAAGGTCAACGAGTCC TCACTGAACTGGCCTCAGGCTAAAACAAAAGGATTCCATACAACCATTGACATTGGAGTTAAGTATGCAGAAAAACAAACAAGACGTTTT GATGAAGGAAAATTAAAAGCTGGCCAAAGTGTAATTGGTCTGCAGATGGGAACCAACAAATGTGCCAGCCAGGCAGGTATGACAGCTTAC GGGACTAGGAGGCATCTTTATGATCCCAAAATGCAAACTGACAAACCTTTTGACCAGACCACAATTAGTCTGCAGATGGGCACTAATAAA GGAGCCAGCCAGGCAGGGATGTTAGCACCAGGTACCAGAAGAGACATCTATGATCAGAAGCTAACATTACAGCCGGTGGACAACTCGACA ATTTCCCTACAGATGGGTACCAACAAAGTTGCTTCCCAGAAAGGAATGAGTGTGTATGGGCTTGGGCGGCAAGTATATGATCCCAAATAC TGTGCTGCTCCTACAGAACCTGTCATTCACAACGGAAGCCAAGGAACAGGAACAAATGGTTCGGAAATCAGTGATAGTGATTATCAGGCA |
| * Fusion transcript sequences (Full-length transcript). |
| >In-frame_OSBPL10_ENST00000396556_chr3_31871532_-_CNN3_ENST00000370206_chr1_95369080_-_2576nt CATTTCCCGGGGATTTGGAGCAGGCACGCGCGGCCCGGGCGTCCGGAGCTGTAGCAGCAGCAGCAGCCGCCGTGCCGGGGCCGCCACCGC GGCGGGCACCCGCGTCCCGGGCGCCCACGGACCATGGAGAGGGCAGTCCAGGGCACAGACGGCGGCGGGGGTAGCAACAGCAGCAGCCGC AGCAGCAGCCGTGCTACCTCGGCGGGCTCCTCGCCCTCCTGCTCTCTGGCGGGCCGGGGGGTCTCCAGCCGGTCGGCGGCGGCCGGGCTC GGCGGCGGGGGAAGCCGCAGCAGCCCGGGCTCTGTGGCCGCTAGCCCGTCCGGGGGAGGCGGCCGCAGGAGGGAGCCGGCGCTCGAGGGC GTGCTCAGCAAATACACCAACCTCCTCCAGGGCTGGCAGAACAGGTACTTCGTACTGGATTTCGAGGCTGGCATCCTGCAGTATTTTGTG AATGAGCAAAGCAAACACCAGAAGCCTCGAGGAGTCCTGTCTTTATCTGGAGCCATAGTGTCCCTGAGCGATGAAGCTCCCCACATGCTG GTGGTGTACTCTGCTAATGGAGAGATGTTTAAACTGAGAGCTGCTGATGCAAAAGAGAAACAATTCTGGGTGACTCAGCTTCGAGCTTGT GCCAAATACCACATGGAAATGAATTCTAAGAGTGCTCCAAGCTCCCGAAGCCGAAGTCTCACTTTGCTCCCACATGGAACACCCAATTCT GCGTCTCCCTGTAGCCAGAGACACCTCAGTGTGGGGGCCCCCGGTGTTGTCACAATCACGCATCACAAGTCGCCTGCAGCCGCCCGAAGA GCCAAGAGTCAGTATTCCGGCCAGCTTCACGAAGTCAGAGAGATTGCTTCCAAGTATGATCATCAGGCAGAAGAAGATCTTCGCAATTGG ATAGAAGAGGTGACAGGCATGAGCATTGGCCCCAACTTCCAGCTGGGCTTAAAGGATGGCATCATCCTCTGCGAACTTATAAACAAGCTA CAGCCAGGCTCAGTGAAGAAGGTCAACGAGTCCTCACTGAACTGGCCTCAGTTGGAGAATATTGGCAACTTTATTAAAGCTATTCAGGCT TATGGTATGAAGCCACATGACATATTCGAAGCAAATGATCTTTTTGAGAATGGAAACATGACCCAGGTTCAGACTACTCTGGTGGCTCTA GCAGGTCTGGCTAAAACAAAAGGATTCCATACAACCATTGACATTGGAGTTAAGTATGCAGAAAAACAAACAAGACGTTTTGATGAAGGA AAATTAAAAGCTGGCCAAAGTGTAATTGGTCTGCAGATGGGAACCAACAAATGTGCCAGCCAGGCAGGTATGACAGCTTACGGGACTAGG AGGCATCTTTATGATCCCAAAATGCAAACTGACAAACCTTTTGACCAGACCACAATTAGTCTGCAGATGGGCACTAATAAAGGAGCCAGC CAGGCAGGGATGTTAGCACCAGGTACCAGAAGAGACATCTATGATCAGAAGCTAACATTACAGCCGGTGGACAACTCGACAATTTCCCTA CAGATGGGTACCAACAAAGTTGCTTCCCAGAAAGGAATGAGTGTGTATGGGCTTGGGCGGCAAGTATATGATCCCAAATACTGTGCTGCT CCTACAGAACCTGTCATTCACAACGGAAGCCAAGGAACAGGAACAAATGGTTCGGAAATCAGTGATAGTGATTATCAGGCAGAATACCCT GATGAGTATCATGGCGAGTACCAGGATGACTACCCCAGAGATTACCAATATAGCGACCAAGGCATTGATTATTAGATCCACACAGAAGGA GCTCAGTATTTAGTCCTTTGTTTTTATTCAGTGAGAACCAAGCTAGCCTTGAGTAATTTTTATCTTGTCTTCCTAAAACACTATTAAGCT TATTGTACTTTTAAGAAAAATTGCCTTACGTACATTCCTTTTTCCTTTTTCTGCCTCTTCCCTCAATAGTTGCCTTTTAGTGCTGTAATA GTTAAATCCTACAGCATAATCAATAACTCGCATATGAAGTAAAAAGGAATACTGTGAAAGGGGAGTACTCTTGTACAGCCAGTTCTTTTA TGCAAAAATCTATGCATTTTTACAATCTTATATTAAACTGGTATTTTCAAACAATAGGAAACTTTTTTTTTTTTTTTTTTTTTTTACAGT TTAGTGTATCTGGTTTCTACATGGAAGACTAAACTCATGCTTATTGCTAAATGTGGTCTTTGCCAACTAAATTTAAGATGCAGCATTTTA GAAATTTACATATCAATGTTTCTACAGTATTGTTTGCTAATTTTTAAATAAAGTCATGATCAGTGTGCATTTGTGATTATATGTGTACTC ATTCTCTTACCTAGCGAACAAGATCTTTTCAGAGTGGTGTTTCTAAAAGAGCATGTACAAAAGTGGCCTGTGGACATTTAGGCCTGGGTG ATGCATTTGCTCTTCCTGTTTGTGCCAATGTATCAATGTAGAGTTGCTCTGTTTTCTTCAACTGTATTTATTGCTGCATTTCTCAGCATA >In-frame_OSBPL10_ENST00000396556_chr3_31871532_-_CNN3_ENST00000538964_chr1_95369080_-_2317nt CATTTCCCGGGGATTTGGAGCAGGCACGCGCGGCCCGGGCGTCCGGAGCTGTAGCAGCAGCAGCAGCCGCCGTGCCGGGGCCGCCACCGC GGCGGGCACCCGCGTCCCGGGCGCCCACGGACCATGGAGAGGGCAGTCCAGGGCACAGACGGCGGCGGGGGTAGCAACAGCAGCAGCCGC AGCAGCAGCCGTGCTACCTCGGCGGGCTCCTCGCCCTCCTGCTCTCTGGCGGGCCGGGGGGTCTCCAGCCGGTCGGCGGCGGCCGGGCTC GGCGGCGGGGGAAGCCGCAGCAGCCCGGGCTCTGTGGCCGCTAGCCCGTCCGGGGGAGGCGGCCGCAGGAGGGAGCCGGCGCTCGAGGGC GTGCTCAGCAAATACACCAACCTCCTCCAGGGCTGGCAGAACAGGTACTTCGTACTGGATTTCGAGGCTGGCATCCTGCAGTATTTTGTG AATGAGCAAAGCAAACACCAGAAGCCTCGAGGAGTCCTGTCTTTATCTGGAGCCATAGTGTCCCTGAGCGATGAAGCTCCCCACATGCTG GTGGTGTACTCTGCTAATGGAGAGATGTTTAAACTGAGAGCTGCTGATGCAAAAGAGAAACAATTCTGGGTGACTCAGCTTCGAGCTTGT GCCAAATACCACATGGAAATGAATTCTAAGAGTGCTCCAAGCTCCCGAAGCCGAAGTCTCACTTTGCTCCCACATGGAACACCCAATTCT GCGTCTCCCTGTAGCCAGAGACACCTCAGTGTGGGGGCCCCCGGTGTTGTCACAATCACGCATCACAAGTCGCCTGCAGCCGCCCGAAGA GCCAAGAGTCAGTATTCCGGCCAGCTTCACGAAGTCAGAGAGATTGCTTCCAAGTATGATCATCAGGCAGAAGAAGATCTTCGCAATTGG ATAGAAGAGGTGACAGGCATGAGCATTGGCCCCAACTTCCAGCTGGGCTTAAAGGATGGCATCATCCTCTGCGAACTTATAAACAAGCTA CAGCCAGGCTCAGTGAAGAAGGTCAACGAGTCCTCACTGAACTGGCCTCAGTTGGAGAATATTGGCAACTTTATTAAAGCTATTCAGGCT TATGGTATGAAGCCACATGACATATTCGAAGCAAATGATCTTTTTGAGAATGGAAACATGACCCAGGTTCAGACTACTCTGGTGGCTCTA GCAGGTCTGGCTAAAACAAAAGGATTCCATACAACCATTGACATTGGAGTTAAGTATGCAGAAAAACAAACAAGACGTTTTGATGAAGGA AAATTAAAAGCTGGCCAAAGTGTAATTGGTCTGCAGATGGGAACCAACAAATGTGCCAGCCAGGCAGGTATGACAGCTTACGGGACTAGG AGGCATCTTTATGATCCCAAAATGCAAACTGACAAACCTTTTGACCAGACCACAATTAGTCTGCAGATGGGCACTAATAAAGGAGCCAGC CAGGCAGGGATGTTAGCACCAGGTACCAGAAGAGACATCTATGATCAGAAGCTAACATTACAGCCGGTGGACAACTCGACAATTTCCCTA CAGATGGGTACCAACAAAGTTGCTTCCCAGAAAGGAATGAGTGTGTATGGGCTTGGGCGGCAAGTATATGATCCCAAATACTGTGCTGCT CCTACAGAACCTGTCATTCACAACGGAAGCCAAGGAACAGGAACAAATGGTTCGGAAATCAGTGATAGTGATTATCAGGCAGAATACCCT GATGAGTATCATGGCGAGTACCAGGATGACTACCCCAGAGATTACCAATATAGCGACCAAGGCATTGATTATTAGATCCACACAGAAGGA GCTCAGTATTTAGTCCTTTGTTTTTATTCAGTGAGAACCAAGCTAGCCTTGAGTAATTTTTATCTTGTCTTCCTAAAACACTATTAAGCT TATTGTACTTTTAAGAAAAATTGCCTTACGTACATTCCTTTTTCCTTTTTCTGCCTCTTCCCTCAATAGTTGCCTTTTAGTGCTGTAATA GTTAAATCCTACAGCATAATCAATAACTCGCATATGAAGTAAAAAGGAATACTGTGAAAGGGGAGTACTCTTGTACAGCCAGTTCTTTTA TGCAAAAATCTATGCATTTTTACAATCTTATATTAAACTGGTATTTTCAAACAATAGGAAACTTTTTTTTTTTTTTTTTTTTTTTACAGT TTAGTGTATCTGGTTTCTACATGGAAGACTAAACTCATGCTTATTGCTAAATGTGGTCTTTGCCAACTAAATTTAAGATGCAGCATTTTA >In-frame_OSBPL10_ENST00000396556_chr3_31871532_-_CNN3_ENST00000394202_chr1_95369080_-_2044nt CATTTCCCGGGGATTTGGAGCAGGCACGCGCGGCCCGGGCGTCCGGAGCTGTAGCAGCAGCAGCAGCCGCCGTGCCGGGGCCGCCACCGC GGCGGGCACCCGCGTCCCGGGCGCCCACGGACCATGGAGAGGGCAGTCCAGGGCACAGACGGCGGCGGGGGTAGCAACAGCAGCAGCCGC AGCAGCAGCCGTGCTACCTCGGCGGGCTCCTCGCCCTCCTGCTCTCTGGCGGGCCGGGGGGTCTCCAGCCGGTCGGCGGCGGCCGGGCTC GGCGGCGGGGGAAGCCGCAGCAGCCCGGGCTCTGTGGCCGCTAGCCCGTCCGGGGGAGGCGGCCGCAGGAGGGAGCCGGCGCTCGAGGGC GTGCTCAGCAAATACACCAACCTCCTCCAGGGCTGGCAGAACAGGTACTTCGTACTGGATTTCGAGGCTGGCATCCTGCAGTATTTTGTG AATGAGCAAAGCAAACACCAGAAGCCTCGAGGAGTCCTGTCTTTATCTGGAGCCATAGTGTCCCTGAGCGATGAAGCTCCCCACATGCTG GTGGTGTACTCTGCTAATGGAGAGATGTTTAAACTGAGAGCTGCTGATGCAAAAGAGAAACAATTCTGGGTGACTCAGCTTCGAGCTTGT GCCAAATACCACATGGAAATGAATTCTAAGAGTGCTCCAAGCTCCCGAAGCCGAAGTCTCACTTTGCTCCCACATGGAACACCCAATTCT GCGTCTCCCTGTAGCCAGAGACACCTCAGTGTGGGGGCCCCCGGTGTTGTCACAATCACGCATCACAAGTCGCCTGCAGCCGCCCGAAGA GCCAAGAGTCAGTATTCCGGCCAGCTTCACGAAGTCAGAGAGATTGCTTCCAAGTATGATCATCAGGCAGAAGAAGATCTTCGCAATTGG ATAGAAGAGGTGACAGGCATGAGCATTGGCCCCAACTTCCAGCTGGGCTTAAAGGATGGCATCATCCTCTGCGAACTTATAAACAAGCTA CAGCCAGGCTCAGTGAAGAAGGTCAACGAGTCCTCACTGAACTGGCCTCAGGCTAAAACAAAAGGATTCCATACAACCATTGACATTGGA GTTAAGTATGCAGAAAAACAAACAAGACGTTTTGATGAAGGAAAATTAAAAGCTGGCCAAAGTGTAATTGGTCTGCAGATGGGAACCAAC AAATGTGCCAGCCAGGCAGGTATGACAGCTTACGGGACTAGGAGGCATCTTTATGATCCCAAAATGCAAACTGACAAACCTTTTGACCAG ACCACAATTAGTCTGCAGATGGGCACTAATAAAGGAGCCAGCCAGGCAGGGATGTTAGCACCAGGTACCAGAAGAGACATCTATGATCAG AAGCTAACATTACAGCCGGTGGACAACTCGACAATTTCCCTACAGATGGGTACCAACAAAGTTGCTTCCCAGAAAGGAATGAGTGTGTAT GGGCTTGGGCGGCAAGTATATGATCCCAAATACTGTGCTGCTCCTACAGAACCTGTCATTCACAACGGAAGCCAAGGAACAGGAACAAAT GGTTCGGAAATCAGTGATAGTGATTATCAGGCAGAATACCCTGATGAGTATCATGGCGAGTACCAGGATGACTACCCCAGAGATTACCAA TATAGCGACCAAGGCATTGATTATTAGATCCACACAGAAGGAGCTCAGTATTTAGTCCTTTGTTTTTATTCAGTGAGAACCAAGCTAGCC TTGAGTAATTTTTATCTTGTCTTCCTAAAACACTATTAAGCTTATTGTACTTTTAAGAAAAATTGCCTTACGTACATTCCTTTTTCCTTT TTCTGCCTCTTCCCTCAATAGTTGCCTTTTAGTGCTGTAATAGTTAAATCCTACAGCATAATCAATAACTCGCATATGAAGTAAAAAGGA ATACTGTGAAAGGGGAGTACTCTTGTACAGCCAGTTCTTTTATGCAAAAATCTATGCATTTTTACAATCTTATATTAAACTGGTATTTTC |
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FusionGenePPI for OSBPL10_CNN3 |
| Go to ChiPPI (Chimeric Protein-Protein interactions) to see the chimeric PPI interaction in . |
| Protein-protein interactors with each fusion partner protein in wild-type (BIOGRID-3.4.160) |
| Hgene | Hgene's interactors | Tgene | Tgene's interactors |
| OSBPL10 | AP2B1, ALDOA, BBS1, GBAS, MMP2, CUL1, CLINT1, KEAP1, SAP18, SRRM2, WRNIP1, CLPB, USP11, OSBPL9, ZC3H18, PGAM5, IKBKG, VAPB, VAPA | CNN3 | EMD, VKORC1, PAN2, CNN2, CARM1, YKT6, MTHFD1L, NTRK1, CDC73, CDH1, DUSP13, G3BP1, TES |
| - Retained PPIs in in-frame fusion. |
| Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Still interaction with |
| - Lost PPIs in in-frame fusion. |
| Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Interaction lost with |
| - Retained PPIs, but lost function due to frame-shift fusion. |
| Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Interaction lost with |
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RelatedDrugs for OSBPL10_CNN3 |
| Drugs targeting genes involved in this fusion gene. (DrugBank Version 5.1.0 2018-04-02) |
| Partner | Gene | UniProtAcc | DrugBank ID | Drug name | Drug activity | Drug type | Drug status |
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RelatedDiseases for OSBPL10_CNN3 |
| Diseases associated with fusion partners. (DisGeNet 4.0) |
| Partner | Gene | Disease ID | Disease name | # pubmeds | Source |
| Tgene | CNN3 | C0024667 | Animal Mammary Neoplasms | 1 | CTD_human |
| Tgene | CNN3 | C0024668 | Mammary Neoplasms, Experimental | 1 | CTD_human |
| Tgene | CNN3 | C0033578 | Prostatic Neoplasms | 1 | CTD_human |
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