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Fusion gene ID: 25361 |
FusionGeneSummary for OCLN_CCNB1 |
Fusion gene summary |
Fusion gene information | Fusion gene name: OCLN_CCNB1 | Fusion gene ID: 25361 | Hgene | Tgene | Gene symbol | OCLN | CCNB1 | Gene ID | 100506658 | 891 |
Gene name | occludin | cyclin B1 | |
Synonyms | BLCPMG|PPP1R115|PTORCH1 | CCNB | |
Cytomap | 5q13.2 | 5q13.2 | |
Type of gene | protein-coding | protein-coding | |
Description | occludinphosphatase 1, regulatory subunit 115tight junction protein occludin | G2/mitotic-specific cyclin-B1 | |
Modification date | 20180519 | 20180523 | |
UniProtAcc | Q16625 | P14635 | |
Ensembl transtripts involved in fusion gene | ENST00000355237, ENST00000396442, ENST00000380766, ENST00000538151, ENST00000542132, ENST00000514370, | ENST00000256442, | |
Fusion gene scores | * DoF score | 6 X 4 X 5=120 | 3 X 3 X 3=27 |
# samples | 6 | 3 | |
** MAII score | log2(6/120*10)=-1 possibly effective Gene in Pan-Cancer Fusion Genes (peGinPCFGs). DoF>8 and MAII<0 | log2(3/27*10)=0.15200309344505 effective Gene in Pan-Cancer Fusion Genes (eGinPCFGs). DoF>8 and MAII>0 | |
Context | PubMed: OCLN [Title/Abstract] AND CCNB1 [Title/Abstract] AND fusion [Title/Abstract] | ||
Functional or gene categories assigned by FusionGDB annotation |
* DoF score (Degree of Frequency) = # partners X # break points X # cancer types ** MAII score (Major Active Isofusion Index) = log2(# samples/DoF score*10) |
Gene ontology of each fusion partner gene with evidence of Inferred from Direct Assay (IDA) from Entrez |
Partner | Gene | GO ID | GO term | PubMed ID |
Tgene | CCNB1 | GO:0010971 | positive regulation of G2/M transition of mitotic cell cycle | 24746669 |
Tgene | CCNB1 | GO:1905448 | positive regulation of mitochondrial ATP synthesis coupled electron transport | 24746669 |
Fusion gene information from three resources (ChiTars (NAR, 2018), tumorfusions (NAR, 2018), Gao et al. (Cell, 2018)) * All genome coordinats were lifted-over on hg19. * Click on the break point to see the gene structure around the break point region using the UCSC Genome Browser. |
Data type | Source | Cancer type | Sample | Hgene | Hchr | Hbp | Hstrand | Tgene | Tchr | Tbp | Tstrand |
TCGA | RV | BLCA | TCGA-2F-A9KP-01A | OCLN | chr5 | 68809936 | + | CCNB1 | chr5 | 68467097 | + |
* LD: Li Ding group's fusion gene list RV: Roel Verhaak group's fusion gene list ChiTaRs fusion database |
Open reading frame (ORF) analsis of fusion genes based on Ensembl gene isoform structure. * Click on the break point to see the gene structure around the break point region using the UCSC Genome Browser. |
ORF | Henst | Tenst | Hgene | Hchr | Hbp | Hstrand | Tgene | Tchr | Tbp | Tstrand |
In-frame | ENST00000355237 | ENST00000256442 | OCLN | chr5 | 68809936 | + | CCNB1 | chr5 | 68467097 | + |
In-frame | ENST00000396442 | ENST00000256442 | OCLN | chr5 | 68809936 | + | CCNB1 | chr5 | 68467097 | + |
intron-3CDS | ENST00000380766 | ENST00000256442 | OCLN | chr5 | 68809936 | + | CCNB1 | chr5 | 68467097 | + |
In-frame | ENST00000538151 | ENST00000256442 | OCLN | chr5 | 68809936 | + | CCNB1 | chr5 | 68467097 | + |
intron-3CDS | ENST00000542132 | ENST00000256442 | OCLN | chr5 | 68809936 | + | CCNB1 | chr5 | 68467097 | + |
intron-3CDS | ENST00000514370 | ENST00000256442 | OCLN | chr5 | 68809936 | + | CCNB1 | chr5 | 68467097 | + |
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FusionProtFeatures for OCLN_CCNB1 |
Main function of each fusion partner protein. (from UniProt) |
Hgene | Tgene |
OCLN | CCNB1 |
Essential for the control of the cell cycle at the G2/M(mitosis) transition. {ECO:0000269|PubMed:17495531,ECO:0000269|PubMed:17495533}. |
Retention analysis result of each fusion partner protein across 39 protein features of UniProt such as six molecule processing features, 13 region features, four site features, six amino acid modification features, two natural variation features, five experimental info features, and 3 secondary structure features. Here, because of limited space for viewing, we only show the protein feature retention information belong to the 13 regional features. All retention annotation result can be downloaded at . * Minus value of BPloci means that the break pointn is located before the CDS. |
- In-frame and retained protein feature among the 13 regional features. |
Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Protein feature | Protein feature note |
Hgene | OCLN | chr5:68809936 | chr5:68467097 | ENST00000355237 | + | 4 | 9 | 92_131 | 297 | 523 | Compositional bias | Note=Gly/Tyr-rich |
Hgene | OCLN | chr5:68809936 | chr5:68467097 | ENST00000396442 | + | 4 | 9 | 92_131 | 297 | 523 | Compositional bias | Note=Gly/Tyr-rich |
Hgene | OCLN | chr5:68809936 | chr5:68467097 | ENST00000355237 | + | 4 | 9 | 60_269 | 297 | 523 | Domain | MARVEL |
Hgene | OCLN | chr5:68809936 | chr5:68467097 | ENST00000396442 | + | 4 | 9 | 60_269 | 297 | 523 | Domain | MARVEL |
Hgene | OCLN | chr5:68809936 | chr5:68467097 | ENST00000355237 | + | 4 | 9 | 161_170 | 297 | 523 | Topological domain | Cytoplasmic |
Hgene | OCLN | chr5:68809936 | chr5:68467097 | ENST00000355237 | + | 4 | 9 | 196_243 | 297 | 523 | Topological domain | Extracellular |
Hgene | OCLN | chr5:68809936 | chr5:68467097 | ENST00000355237 | + | 4 | 9 | 1_66 | 297 | 523 | Topological domain | Cytoplasmic |
Hgene | OCLN | chr5:68809936 | chr5:68467097 | ENST00000355237 | + | 4 | 9 | 90_135 | 297 | 523 | Topological domain | Extracellular |
Hgene | OCLN | chr5:68809936 | chr5:68467097 | ENST00000396442 | + | 4 | 9 | 161_170 | 297 | 523 | Topological domain | Cytoplasmic |
Hgene | OCLN | chr5:68809936 | chr5:68467097 | ENST00000396442 | + | 4 | 9 | 196_243 | 297 | 523 | Topological domain | Extracellular |
Hgene | OCLN | chr5:68809936 | chr5:68467097 | ENST00000396442 | + | 4 | 9 | 1_66 | 297 | 523 | Topological domain | Cytoplasmic |
Hgene | OCLN | chr5:68809936 | chr5:68467097 | ENST00000396442 | + | 4 | 9 | 90_135 | 297 | 523 | Topological domain | Extracellular |
Hgene | OCLN | chr5:68809936 | chr5:68467097 | ENST00000355237 | + | 4 | 9 | 136_160 | 297 | 523 | Transmembrane | Helical |
Hgene | OCLN | chr5:68809936 | chr5:68467097 | ENST00000355237 | + | 4 | 9 | 171_195 | 297 | 523 | Transmembrane | Helical |
Hgene | OCLN | chr5:68809936 | chr5:68467097 | ENST00000355237 | + | 4 | 9 | 244_265 | 297 | 523 | Transmembrane | Helical |
Hgene | OCLN | chr5:68809936 | chr5:68467097 | ENST00000355237 | + | 4 | 9 | 67_89 | 297 | 523 | Transmembrane | Helical |
Hgene | OCLN | chr5:68809936 | chr5:68467097 | ENST00000396442 | + | 4 | 9 | 136_160 | 297 | 523 | Transmembrane | Helical |
Hgene | OCLN | chr5:68809936 | chr5:68467097 | ENST00000396442 | + | 4 | 9 | 171_195 | 297 | 523 | Transmembrane | Helical |
Hgene | OCLN | chr5:68809936 | chr5:68467097 | ENST00000396442 | + | 4 | 9 | 244_265 | 297 | 523 | Transmembrane | Helical |
Hgene | OCLN | chr5:68809936 | chr5:68467097 | ENST00000396442 | + | 4 | 9 | 67_89 | 297 | 523 | Transmembrane | Helical |
- In-frame and not-retained protein feature among the 13 regional features. |
Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Protein feature | Protein feature note |
Hgene | >OCLN | chr5:68809936 | chr5:68467097 | ENST00000355237 | + | 4 | 9 | 426_489 | 297 | 523 | Coiled coil | Ontology_term=ECO:0000255 |
Hgene | >OCLN | chr5:68809936 | chr5:68467097 | ENST00000380766 | + | 1 | 8 | 426_489 | -60 | 469 | Coiled coil | Ontology_term=ECO:0000255 |
Hgene | >OCLN | chr5:68809936 | chr5:68467097 | ENST00000396442 | + | 4 | 9 | 426_489 | 297 | 523 | Coiled coil | Ontology_term=ECO:0000255 |
Hgene | >OCLN | chr5:68809936 | chr5:68467097 | ENST00000538151 | + | 2 | 7 | 426_489 | 46 | 272 | Coiled coil | Ontology_term=ECO:0000255 |
Hgene | >OCLN | chr5:68809936 | chr5:68467097 | ENST00000542132 | + | 1 | 6 | 426_489 | -57 | 201 | Coiled coil | Ontology_term=ECO:0000255 |
Hgene | >OCLN | chr5:68809936 | chr5:68467097 | ENST00000380766 | + | 1 | 8 | 92_131 | -60 | 469 | Compositional bias | Note=Gly/Tyr-rich |
Hgene | >OCLN | chr5:68809936 | chr5:68467097 | ENST00000538151 | + | 2 | 7 | 92_131 | 46 | 272 | Compositional bias | Note=Gly/Tyr-rich |
Hgene | >OCLN | chr5:68809936 | chr5:68467097 | ENST00000542132 | + | 1 | 6 | 92_131 | -57 | 201 | Compositional bias | Note=Gly/Tyr-rich |
Hgene | >OCLN | chr5:68809936 | chr5:68467097 | ENST00000380766 | + | 1 | 8 | 60_269 | -60 | 469 | Domain | MARVEL |
Hgene | >OCLN | chr5:68809936 | chr5:68467097 | ENST00000538151 | + | 2 | 7 | 60_269 | 46 | 272 | Domain | MARVEL |
Hgene | >OCLN | chr5:68809936 | chr5:68467097 | ENST00000542132 | + | 1 | 6 | 60_269 | -57 | 201 | Domain | MARVEL |
Hgene | >OCLN | chr5:68809936 | chr5:68467097 | ENST00000355237 | + | 4 | 9 | 266_522 | 297 | 523 | Topological domain | Cytoplasmic |
Hgene | >OCLN | chr5:68809936 | chr5:68467097 | ENST00000380766 | + | 1 | 8 | 161_170 | -60 | 469 | Topological domain | Cytoplasmic |
Hgene | >OCLN | chr5:68809936 | chr5:68467097 | ENST00000380766 | + | 1 | 8 | 196_243 | -60 | 469 | Topological domain | Extracellular |
Hgene | >OCLN | chr5:68809936 | chr5:68467097 | ENST00000380766 | + | 1 | 8 | 1_66 | -60 | 469 | Topological domain | Cytoplasmic |
Hgene | >OCLN | chr5:68809936 | chr5:68467097 | ENST00000380766 | + | 1 | 8 | 266_522 | -60 | 469 | Topological domain | Cytoplasmic |
Hgene | >OCLN | chr5:68809936 | chr5:68467097 | ENST00000380766 | + | 1 | 8 | 90_135 | -60 | 469 | Topological domain | Extracellular |
Hgene | >OCLN | chr5:68809936 | chr5:68467097 | ENST00000396442 | + | 4 | 9 | 266_522 | 297 | 523 | Topological domain | Cytoplasmic |
Hgene | >OCLN | chr5:68809936 | chr5:68467097 | ENST00000538151 | + | 2 | 7 | 161_170 | 46 | 272 | Topological domain | Cytoplasmic |
Hgene | >OCLN | chr5:68809936 | chr5:68467097 | ENST00000538151 | + | 2 | 7 | 196_243 | 46 | 272 | Topological domain | Extracellular |
Hgene | >OCLN | chr5:68809936 | chr5:68467097 | ENST00000538151 | + | 2 | 7 | 1_66 | 46 | 272 | Topological domain | Cytoplasmic |
Hgene | >OCLN | chr5:68809936 | chr5:68467097 | ENST00000538151 | + | 2 | 7 | 266_522 | 46 | 272 | Topological domain | Cytoplasmic |
Hgene | >OCLN | chr5:68809936 | chr5:68467097 | ENST00000538151 | + | 2 | 7 | 90_135 | 46 | 272 | Topological domain | Extracellular |
Hgene | >OCLN | chr5:68809936 | chr5:68467097 | ENST00000542132 | + | 1 | 6 | 161_170 | -57 | 201 | Topological domain | Cytoplasmic |
Hgene | >OCLN | chr5:68809936 | chr5:68467097 | ENST00000542132 | + | 1 | 6 | 196_243 | -57 | 201 | Topological domain | Extracellular |
Hgene | >OCLN | chr5:68809936 | chr5:68467097 | ENST00000542132 | + | 1 | 6 | 1_66 | -57 | 201 | Topological domain | Cytoplasmic |
Hgene | >OCLN | chr5:68809936 | chr5:68467097 | ENST00000542132 | + | 1 | 6 | 266_522 | -57 | 201 | Topological domain | Cytoplasmic |
Hgene | >OCLN | chr5:68809936 | chr5:68467097 | ENST00000542132 | + | 1 | 6 | 90_135 | -57 | 201 | Topological domain | Extracellular |
Hgene | >OCLN | chr5:68809936 | chr5:68467097 | ENST00000380766 | + | 1 | 8 | 136_160 | -60 | 469 | Transmembrane | Helical |
Hgene | >OCLN | chr5:68809936 | chr5:68467097 | ENST00000380766 | + | 1 | 8 | 171_195 | -60 | 469 | Transmembrane | Helical |
Hgene | >OCLN | chr5:68809936 | chr5:68467097 | ENST00000380766 | + | 1 | 8 | 244_265 | -60 | 469 | Transmembrane | Helical |
Hgene | >OCLN | chr5:68809936 | chr5:68467097 | ENST00000380766 | + | 1 | 8 | 67_89 | -60 | 469 | Transmembrane | Helical |
Hgene | >OCLN | chr5:68809936 | chr5:68467097 | ENST00000538151 | + | 2 | 7 | 136_160 | 46 | 272 | Transmembrane | Helical |
Hgene | >OCLN | chr5:68809936 | chr5:68467097 | ENST00000538151 | + | 2 | 7 | 171_195 | 46 | 272 | Transmembrane | Helical |
Hgene | >OCLN | chr5:68809936 | chr5:68467097 | ENST00000538151 | + | 2 | 7 | 244_265 | 46 | 272 | Transmembrane | Helical |
Hgene | >OCLN | chr5:68809936 | chr5:68467097 | ENST00000538151 | + | 2 | 7 | 67_89 | 46 | 272 | Transmembrane | Helical |
Hgene | >OCLN | chr5:68809936 | chr5:68467097 | ENST00000542132 | + | 1 | 6 | 136_160 | -57 | 201 | Transmembrane | Helical |
Hgene | >OCLN | chr5:68809936 | chr5:68467097 | ENST00000542132 | + | 1 | 6 | 171_195 | -57 | 201 | Transmembrane | Helical |
Hgene | >OCLN | chr5:68809936 | chr5:68467097 | ENST00000542132 | + | 1 | 6 | 244_265 | -57 | 201 | Transmembrane | Helical |
Hgene | >OCLN | chr5:68809936 | chr5:68467097 | ENST00000542132 | + | 1 | 6 | 67_89 | -57 | 201 | Transmembrane | Helical |
Tgene | CCNB1 | chr5:68809936 | chr5:68467097 | ENST00000256442 | + | 2 | 9 | 51_85 | 121 | 434 | Compositional bias | Note=Lys-rich |
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FusionGeneSequence for OCLN_CCNB1 |
For in-frame fusion transcripts, we provide the fusion transcript sequences and fusion amino acid sequences. (nt: nucleotides, aa: amino acids) |
* Fusion amino acid sequences. |
>In-frame_OCLN_ENST00000355237_chr5_68809936_+_CCNB1_ENST00000256442_chr5_68467097_+_610aa MSSRPLESPPPYRPDEFKPNHYAPSNDIYGGEMHVRPMLSQPAYSFYPEDEILHFYKWTSPPGVIRILSMLIIVMCIAIFACVASTLAWD RGYGTSLLGGSVGYPYGGSGFGSYGSGYGYGYGYGYGYGGYTDPRAAKGFMLAMAAFCFIAALVIFVTSVIRSEMSRTRRYYLSVIIVSA ILGIMVFIATIVYIMGVNPTAQSSGSLYGSQIYALCNQFYTPAATGLYVDQYLYHYCVVDPQEAIAIVLGFMIIVAFALIIFFAVKTRRK MDRYDKSNILWDKEHIYDEQPPNVEEWVDTASPSPMETSGCAPAEEDLCQAFSDVILAVNDVDAEDGADPNLCSEYVKDIYAYLRQLEEE QAVRPKYLLGREVTGNMRAILIDWLVQVQMKFRLLQETMYMTVSIIDRFMQNNCVPKKMLQLVGVTAMFIASKYEEMYPPEIGDFAFVTD NTYTKHQIRQMEMKILRALNFGLGRPLPLHFLRRASKIGEVDVEQHTLAKYLMELTMLDYDMVHFPPSQIAAGAFCLALKILDNGEWTPT >In-frame_OCLN_ENST00000396442_chr5_68809936_+_CCNB1_ENST00000256442_chr5_68467097_+_610aa MSSRPLESPPPYRPDEFKPNHYAPSNDIYGGEMHVRPMLSQPAYSFYPEDEILHFYKWTSPPGVIRILSMLIIVMCIAIFACVASTLAWD RGYGTSLLGGSVGYPYGGSGFGSYGSGYGYGYGYGYGYGGYTDPRAAKGFMLAMAAFCFIAALVIFVTSVIRSEMSRTRRYYLSVIIVSA ILGIMVFIATIVYIMGVNPTAQSSGSLYGSQIYALCNQFYTPAATGLYVDQYLYHYCVVDPQEAIAIVLGFMIIVAFALIIFFAVKTRRK MDRYDKSNILWDKEHIYDEQPPNVEEWVDTASPSPMETSGCAPAEEDLCQAFSDVILAVNDVDAEDGADPNLCSEYVKDIYAYLRQLEEE QAVRPKYLLGREVTGNMRAILIDWLVQVQMKFRLLQETMYMTVSIIDRFMQNNCVPKKMLQLVGVTAMFIASKYEEMYPPEIGDFAFVTD NTYTKHQIRQMEMKILRALNFGLGRPLPLHFLRRASKIGEVDVEQHTLAKYLMELTMLDYDMVHFPPSQIAAGAFCLALKILDNGEWTPT >In-frame_OCLN_ENST00000538151_chr5_68809936_+_CCNB1_ENST00000256442_chr5_68467097_+_359aa MIIVAFALIIFFAVKTRRKMDRYDKSNILWDKEHIYDEQPPNVEEWVDTASPSPMETSGCAPAEEDLCQAFSDVILAVNDVDAEDGADPN LCSEYVKDIYAYLRQLEEEQAVRPKYLLGREVTGNMRAILIDWLVQVQMKFRLLQETMYMTVSIIDRFMQNNCVPKKMLQLVGVTAMFIA SKYEEMYPPEIGDFAFVTDNTYTKHQIRQMEMKILRALNFGLGRPLPLHFLRRASKIGEVDVEQHTLAKYLMELTMLDYDMVHFPPSQIA |
* Fusion transcript sequences (only coding sequence (CDS) region). |
>In-frame_OCLN_ENST00000355237_chr5_68809936_+_CCNB1_ENST00000256442_chr5_68467097_+_1830nt ATGTCATCCAGGCCTCTTGAAAGTCCACCTCCTTACAGGCCTGATGAATTCAAACCGAATCATTATGCACCAAGCAATGACATATATGGT GGAGAGATGCATGTTCGACCAATGCTCTCTCAGCCAGCCTACTCTTTTTACCCAGAAGATGAAATTCTTCACTTCTACAAATGGACCTCT CCTCCAGGAGTGATTCGGATCCTGTCTATGCTCATTATTGTGATGTGCATTGCCATCTTTGCCTGTGTGGCCTCCACGCTTGCCTGGGAC AGAGGCTATGGAACTTCCCTTTTAGGAGGTAGTGTAGGCTACCCTTATGGAGGAAGTGGCTTTGGTAGCTACGGAAGTGGCTATGGCTAT GGCTATGGTTATGGCTATGGCTACGGAGGCTATACAGACCCAAGAGCAGCAAAGGGCTTCATGTTGGCCATGGCTGCCTTTTGTTTCATT GCCGCGTTGGTGATCTTTGTTACCAGTGTTATAAGATCTGAAATGTCCAGAACAAGAAGATACTACTTAAGTGTGATAATAGTGAGTGCT ATCCTGGGCATCATGGTGTTTATTGCCACAATTGTCTATATAATGGGAGTGAACCCAACTGCTCAGTCTTCTGGATCTCTATATGGTTCA CAAATATATGCCCTCTGCAACCAATTTTATACACCTGCAGCTACTGGACTCTACGTGGATCAGTATTTGTATCACTACTGTGTTGTGGAT CCCCAGGAGGCCATTGCCATTGTACTGGGGTTCATGATTATTGTGGCTTTTGCTTTAATAATTTTCTTTGCTGTGAAAACTCGAAGAAAG ATGGACAGGTATGACAAGTCCAATATTTTGTGGGACAAGGAACACATTTATGATGAGCAGCCCCCCAATGTCGAGGAGTGGGTTGATACT GCCTCTCCAAGCCCAATGGAAACATCTGGATGTGCCCCTGCAGAAGAAGACCTGTGTCAGGCTTTCTCTGATGTAATTCTTGCAGTAAAT GATGTGGATGCAGAAGATGGAGCTGATCCAAACCTTTGTAGTGAATATGTGAAAGATATTTATGCTTATCTGAGACAACTTGAGGAAGAG CAAGCAGTCAGACCAAAATACCTACTGGGTCGGGAAGTCACTGGAAACATGAGAGCCATCCTAATTGACTGGCTAGTACAGGTTCAAATG AAATTCAGGTTGTTGCAGGAGACCATGTACATGACTGTCTCCATTATTGATCGGTTCATGCAGAATAATTGTGTGCCCAAGAAGATGCTG CAGCTGGTTGGTGTCACTGCCATGTTTATTGCAAGCAAATATGAAGAAATGTACCCTCCAGAAATTGGTGACTTTGCTTTTGTGACTGAC AACACTTATACTAAGCACCAAATCAGACAGATGGAAATGAAGATTCTAAGAGCTTTAAACTTTGGTCTGGGTCGGCCTCTACCTTTGCAC TTCCTTCGGAGAGCATCTAAGATTGGAGAGGTTGATGTCGAGCAACATACTTTGGCCAAATACCTGATGGAACTAACTATGTTGGACTAT GACATGGTGCACTTTCCTCCTTCTCAAATTGCAGCAGGAGCTTTTTGCTTAGCACTGAAAATTCTGGATAATGGTGAATGGACACCAACT CTACAACATTACCTGTCATATACTGAAGAATCTCTTCTTCCAGTTATGCAGCACCTGGCTAAGAATGTAGTCATGGTAAATCAAGGACTT ACAAAGCACATGACTGTCAAGAACAAGTATGCCACATCGAAGCATGCTAAGATCAGCACTCTACCACAGCTGAATTCTGCACTAGTTCAA >In-frame_OCLN_ENST00000396442_chr5_68809936_+_CCNB1_ENST00000256442_chr5_68467097_+_1830nt ATGTCATCCAGGCCTCTTGAAAGTCCACCTCCTTACAGGCCTGATGAATTCAAACCGAATCATTATGCACCAAGCAATGACATATATGGT GGAGAGATGCATGTTCGACCAATGCTCTCTCAGCCAGCCTACTCTTTTTACCCAGAAGATGAAATTCTTCACTTCTACAAATGGACCTCT CCTCCAGGAGTGATTCGGATCCTGTCTATGCTCATTATTGTGATGTGCATTGCCATCTTTGCCTGTGTGGCCTCCACGCTTGCCTGGGAC AGAGGCTATGGAACTTCCCTTTTAGGAGGTAGTGTAGGCTACCCTTATGGAGGAAGTGGCTTTGGTAGCTACGGAAGTGGCTATGGCTAT GGCTATGGTTATGGCTATGGCTACGGAGGCTATACAGACCCAAGAGCAGCAAAGGGCTTCATGTTGGCCATGGCTGCCTTTTGTTTCATT GCCGCGTTGGTGATCTTTGTTACCAGTGTTATAAGATCTGAAATGTCCAGAACAAGAAGATACTACTTAAGTGTGATAATAGTGAGTGCT ATCCTGGGCATCATGGTGTTTATTGCCACAATTGTCTATATAATGGGAGTGAACCCAACTGCTCAGTCTTCTGGATCTCTATATGGTTCA CAAATATATGCCCTCTGCAACCAATTTTATACACCTGCAGCTACTGGACTCTACGTGGATCAGTATTTGTATCACTACTGTGTTGTGGAT CCCCAGGAGGCCATTGCCATTGTACTGGGGTTCATGATTATTGTGGCTTTTGCTTTAATAATTTTCTTTGCTGTGAAAACTCGAAGAAAG ATGGACAGGTATGACAAGTCCAATATTTTGTGGGACAAGGAACACATTTATGATGAGCAGCCCCCCAATGTCGAGGAGTGGGTTGATACT GCCTCTCCAAGCCCAATGGAAACATCTGGATGTGCCCCTGCAGAAGAAGACCTGTGTCAGGCTTTCTCTGATGTAATTCTTGCAGTAAAT GATGTGGATGCAGAAGATGGAGCTGATCCAAACCTTTGTAGTGAATATGTGAAAGATATTTATGCTTATCTGAGACAACTTGAGGAAGAG CAAGCAGTCAGACCAAAATACCTACTGGGTCGGGAAGTCACTGGAAACATGAGAGCCATCCTAATTGACTGGCTAGTACAGGTTCAAATG AAATTCAGGTTGTTGCAGGAGACCATGTACATGACTGTCTCCATTATTGATCGGTTCATGCAGAATAATTGTGTGCCCAAGAAGATGCTG CAGCTGGTTGGTGTCACTGCCATGTTTATTGCAAGCAAATATGAAGAAATGTACCCTCCAGAAATTGGTGACTTTGCTTTTGTGACTGAC AACACTTATACTAAGCACCAAATCAGACAGATGGAAATGAAGATTCTAAGAGCTTTAAACTTTGGTCTGGGTCGGCCTCTACCTTTGCAC TTCCTTCGGAGAGCATCTAAGATTGGAGAGGTTGATGTCGAGCAACATACTTTGGCCAAATACCTGATGGAACTAACTATGTTGGACTAT GACATGGTGCACTTTCCTCCTTCTCAAATTGCAGCAGGAGCTTTTTGCTTAGCACTGAAAATTCTGGATAATGGTGAATGGACACCAACT CTACAACATTACCTGTCATATACTGAAGAATCTCTTCTTCCAGTTATGCAGCACCTGGCTAAGAATGTAGTCATGGTAAATCAAGGACTT ACAAAGCACATGACTGTCAAGAACAAGTATGCCACATCGAAGCATGCTAAGATCAGCACTCTACCACAGCTGAATTCTGCACTAGTTCAA >In-frame_OCLN_ENST00000538151_chr5_68809936_+_CCNB1_ENST00000256442_chr5_68467097_+_1077nt ATGATTATTGTGGCTTTTGCTTTAATAATTTTCTTTGCTGTGAAAACTCGAAGAAAGATGGACAGGTATGACAAGTCCAATATTTTGTGG GACAAGGAACACATTTATGATGAGCAGCCCCCCAATGTCGAGGAGTGGGTTGATACTGCCTCTCCAAGCCCAATGGAAACATCTGGATGT GCCCCTGCAGAAGAAGACCTGTGTCAGGCTTTCTCTGATGTAATTCTTGCAGTAAATGATGTGGATGCAGAAGATGGAGCTGATCCAAAC CTTTGTAGTGAATATGTGAAAGATATTTATGCTTATCTGAGACAACTTGAGGAAGAGCAAGCAGTCAGACCAAAATACCTACTGGGTCGG GAAGTCACTGGAAACATGAGAGCCATCCTAATTGACTGGCTAGTACAGGTTCAAATGAAATTCAGGTTGTTGCAGGAGACCATGTACATG ACTGTCTCCATTATTGATCGGTTCATGCAGAATAATTGTGTGCCCAAGAAGATGCTGCAGCTGGTTGGTGTCACTGCCATGTTTATTGCA AGCAAATATGAAGAAATGTACCCTCCAGAAATTGGTGACTTTGCTTTTGTGACTGACAACACTTATACTAAGCACCAAATCAGACAGATG GAAATGAAGATTCTAAGAGCTTTAAACTTTGGTCTGGGTCGGCCTCTACCTTTGCACTTCCTTCGGAGAGCATCTAAGATTGGAGAGGTT GATGTCGAGCAACATACTTTGGCCAAATACCTGATGGAACTAACTATGTTGGACTATGACATGGTGCACTTTCCTCCTTCTCAAATTGCA GCAGGAGCTTTTTGCTTAGCACTGAAAATTCTGGATAATGGTGAATGGACACCAACTCTACAACATTACCTGTCATATACTGAAGAATCT CTTCTTCCAGTTATGCAGCACCTGGCTAAGAATGTAGTCATGGTAAATCAAGGACTTACAAAGCACATGACTGTCAAGAACAAGTATGCC |
* Fusion transcript sequences (Full-length transcript). |
>In-frame_OCLN_ENST00000355237_chr5_68809936_+_CCNB1_ENST00000256442_chr5_68467097_+_2880nt GCCTCTCTCCATCAGACACCCCAAGGTTCCATCCGAAGCAGGCGGAGCACCGAACGCACCCCGGGGTGGTCAGGGACCCCCATCCGTGCT GCCCCCTAGGAGCCCGCGCCTCTCCTCTGCGCCCCGCCTCTCGGGCCGCAACGTCGCGCGGTTCCTTTAACAGCGCGCTGGCAGGGTGTG GGAAGCAGGACCGCGTCCTCCCGCCCCCTCCCATCCGAGTTTCAGGTGAATTGGTCACCGAGGGAGGAGGCCGACACACCACACCTACAC TCCCGCGTCCACCTCTCCCTCCCTGCTTCCTCTGGCGGAGGCGGCAGGAACCGAGAGCCAGGTCCAGAGCGCCGAGGAGCCGGTCTAGGA CGCAGCAGATTGGTTTATCTTGGAAGCTAAAGGGCATTGCTCATCCTGAAGATCAGCTGACCATTGACAATCAGCCATGTCATCCAGGCC TCTTGAAAGTCCACCTCCTTACAGGCCTGATGAATTCAAACCGAATCATTATGCACCAAGCAATGACATATATGGTGGAGAGATGCATGT TCGACCAATGCTCTCTCAGCCAGCCTACTCTTTTTACCCAGAAGATGAAATTCTTCACTTCTACAAATGGACCTCTCCTCCAGGAGTGAT TCGGATCCTGTCTATGCTCATTATTGTGATGTGCATTGCCATCTTTGCCTGTGTGGCCTCCACGCTTGCCTGGGACAGAGGCTATGGAAC TTCCCTTTTAGGAGGTAGTGTAGGCTACCCTTATGGAGGAAGTGGCTTTGGTAGCTACGGAAGTGGCTATGGCTATGGCTATGGTTATGG CTATGGCTACGGAGGCTATACAGACCCAAGAGCAGCAAAGGGCTTCATGTTGGCCATGGCTGCCTTTTGTTTCATTGCCGCGTTGGTGAT CTTTGTTACCAGTGTTATAAGATCTGAAATGTCCAGAACAAGAAGATACTACTTAAGTGTGATAATAGTGAGTGCTATCCTGGGCATCAT GGTGTTTATTGCCACAATTGTCTATATAATGGGAGTGAACCCAACTGCTCAGTCTTCTGGATCTCTATATGGTTCACAAATATATGCCCT CTGCAACCAATTTTATACACCTGCAGCTACTGGACTCTACGTGGATCAGTATTTGTATCACTACTGTGTTGTGGATCCCCAGGAGGCCAT TGCCATTGTACTGGGGTTCATGATTATTGTGGCTTTTGCTTTAATAATTTTCTTTGCTGTGAAAACTCGAAGAAAGATGGACAGGTATGA CAAGTCCAATATTTTGTGGGACAAGGAACACATTTATGATGAGCAGCCCCCCAATGTCGAGGAGTGGGTTGATACTGCCTCTCCAAGCCC AATGGAAACATCTGGATGTGCCCCTGCAGAAGAAGACCTGTGTCAGGCTTTCTCTGATGTAATTCTTGCAGTAAATGATGTGGATGCAGA AGATGGAGCTGATCCAAACCTTTGTAGTGAATATGTGAAAGATATTTATGCTTATCTGAGACAACTTGAGGAAGAGCAAGCAGTCAGACC AAAATACCTACTGGGTCGGGAAGTCACTGGAAACATGAGAGCCATCCTAATTGACTGGCTAGTACAGGTTCAAATGAAATTCAGGTTGTT GCAGGAGACCATGTACATGACTGTCTCCATTATTGATCGGTTCATGCAGAATAATTGTGTGCCCAAGAAGATGCTGCAGCTGGTTGGTGT CACTGCCATGTTTATTGCAAGCAAATATGAAGAAATGTACCCTCCAGAAATTGGTGACTTTGCTTTTGTGACTGACAACACTTATACTAA GCACCAAATCAGACAGATGGAAATGAAGATTCTAAGAGCTTTAAACTTTGGTCTGGGTCGGCCTCTACCTTTGCACTTCCTTCGGAGAGC ATCTAAGATTGGAGAGGTTGATGTCGAGCAACATACTTTGGCCAAATACCTGATGGAACTAACTATGTTGGACTATGACATGGTGCACTT TCCTCCTTCTCAAATTGCAGCAGGAGCTTTTTGCTTAGCACTGAAAATTCTGGATAATGGTGAATGGACACCAACTCTACAACATTACCT GTCATATACTGAAGAATCTCTTCTTCCAGTTATGCAGCACCTGGCTAAGAATGTAGTCATGGTAAATCAAGGACTTACAAAGCACATGAC TGTCAAGAACAAGTATGCCACATCGAAGCATGCTAAGATCAGCACTCTACCACAGCTGAATTCTGCACTAGTTCAAGATTTAGCCAAGGC TGTGGCAAAGGTGTAACTTGTAAACTTGAGTTGGAGTACTATATTTACAAATAAAATTGGCACCATGTGCCATCTGTACATATTACTGTT GCATTTACTTTTAATAAAGCTTGTGGCCCCTTTTACTTTTTTATAGCTTAACTAATTTGAATGTGGTTACTTCCTACTGTAGGGTAGCGG AAAAGTTGTCTTAAAAGGTATGGTGGGGATATTTTTAAAAACTCCTTTTGGTTTACCTGGGGATCCAATTGATGTATATGTTTATATACT GGGTTCTTGTTTTATATACCTGGCTTTTACTTTATTAATATGAGTTACTGAAGGTGATGGAGGTATTTGAAAATTTTACTTCCATAGGAC ATACTGCATGTAAGCCAAGTCATGGAGAATCTGCTGCATAGCTCTATTTTAAAGTAAAAGTCTACCACCGAATCCCTAGTCCCCCTGTTT TCTGTTTCTTCTTGTGATTGCTGCCATAATTCTAAGTTATTTACTTTTACCACTATTTAAGTTATCAACTTTAGCTAGTATCTTCAAACT TTCACTTTGAAAAATGAGAATTTTATATTCTAAGCCAGTTTTCATTTTGGTTTTGTGTTTTGGTTAATAAAACAATACTCAAATACAAAA >In-frame_OCLN_ENST00000396442_chr5_68809936_+_CCNB1_ENST00000256442_chr5_68467097_+_2623nt AGTCCCCGGCTGAGCGCTGGCGGTCGGTGCGGCGTCAGGTGCGCCCGCCAGGTGAGCGCGCTCCCTGGCACCGTTGGCCCCCGGAGGGTC GGGCCCAGTTGCGGCGAGCGGATTGGTTTATCTTGGAAGCTAAAGGGCATTGCTCATCCTGAAGATCAGCTGACCATTGACAATCAGCCA TGTCATCCAGGCCTCTTGAAAGTCCACCTCCTTACAGGCCTGATGAATTCAAACCGAATCATTATGCACCAAGCAATGACATATATGGTG GAGAGATGCATGTTCGACCAATGCTCTCTCAGCCAGCCTACTCTTTTTACCCAGAAGATGAAATTCTTCACTTCTACAAATGGACCTCTC CTCCAGGAGTGATTCGGATCCTGTCTATGCTCATTATTGTGATGTGCATTGCCATCTTTGCCTGTGTGGCCTCCACGCTTGCCTGGGACA GAGGCTATGGAACTTCCCTTTTAGGAGGTAGTGTAGGCTACCCTTATGGAGGAAGTGGCTTTGGTAGCTACGGAAGTGGCTATGGCTATG GCTATGGTTATGGCTATGGCTACGGAGGCTATACAGACCCAAGAGCAGCAAAGGGCTTCATGTTGGCCATGGCTGCCTTTTGTTTCATTG CCGCGTTGGTGATCTTTGTTACCAGTGTTATAAGATCTGAAATGTCCAGAACAAGAAGATACTACTTAAGTGTGATAATAGTGAGTGCTA TCCTGGGCATCATGGTGTTTATTGCCACAATTGTCTATATAATGGGAGTGAACCCAACTGCTCAGTCTTCTGGATCTCTATATGGTTCAC AAATATATGCCCTCTGCAACCAATTTTATACACCTGCAGCTACTGGACTCTACGTGGATCAGTATTTGTATCACTACTGTGTTGTGGATC CCCAGGAGGCCATTGCCATTGTACTGGGGTTCATGATTATTGTGGCTTTTGCTTTAATAATTTTCTTTGCTGTGAAAACTCGAAGAAAGA TGGACAGGTATGACAAGTCCAATATTTTGTGGGACAAGGAACACATTTATGATGAGCAGCCCCCCAATGTCGAGGAGTGGGTTGATACTG CCTCTCCAAGCCCAATGGAAACATCTGGATGTGCCCCTGCAGAAGAAGACCTGTGTCAGGCTTTCTCTGATGTAATTCTTGCAGTAAATG ATGTGGATGCAGAAGATGGAGCTGATCCAAACCTTTGTAGTGAATATGTGAAAGATATTTATGCTTATCTGAGACAACTTGAGGAAGAGC AAGCAGTCAGACCAAAATACCTACTGGGTCGGGAAGTCACTGGAAACATGAGAGCCATCCTAATTGACTGGCTAGTACAGGTTCAAATGA AATTCAGGTTGTTGCAGGAGACCATGTACATGACTGTCTCCATTATTGATCGGTTCATGCAGAATAATTGTGTGCCCAAGAAGATGCTGC AGCTGGTTGGTGTCACTGCCATGTTTATTGCAAGCAAATATGAAGAAATGTACCCTCCAGAAATTGGTGACTTTGCTTTTGTGACTGACA ACACTTATACTAAGCACCAAATCAGACAGATGGAAATGAAGATTCTAAGAGCTTTAAACTTTGGTCTGGGTCGGCCTCTACCTTTGCACT TCCTTCGGAGAGCATCTAAGATTGGAGAGGTTGATGTCGAGCAACATACTTTGGCCAAATACCTGATGGAACTAACTATGTTGGACTATG ACATGGTGCACTTTCCTCCTTCTCAAATTGCAGCAGGAGCTTTTTGCTTAGCACTGAAAATTCTGGATAATGGTGAATGGACACCAACTC TACAACATTACCTGTCATATACTGAAGAATCTCTTCTTCCAGTTATGCAGCACCTGGCTAAGAATGTAGTCATGGTAAATCAAGGACTTA CAAAGCACATGACTGTCAAGAACAAGTATGCCACATCGAAGCATGCTAAGATCAGCACTCTACCACAGCTGAATTCTGCACTAGTTCAAG ATTTAGCCAAGGCTGTGGCAAAGGTGTAACTTGTAAACTTGAGTTGGAGTACTATATTTACAAATAAAATTGGCACCATGTGCCATCTGT ACATATTACTGTTGCATTTACTTTTAATAAAGCTTGTGGCCCCTTTTACTTTTTTATAGCTTAACTAATTTGAATGTGGTTACTTCCTAC TGTAGGGTAGCGGAAAAGTTGTCTTAAAAGGTATGGTGGGGATATTTTTAAAAACTCCTTTTGGTTTACCTGGGGATCCAATTGATGTAT ATGTTTATATACTGGGTTCTTGTTTTATATACCTGGCTTTTACTTTATTAATATGAGTTACTGAAGGTGATGGAGGTATTTGAAAATTTT ACTTCCATAGGACATACTGCATGTAAGCCAAGTCATGGAGAATCTGCTGCATAGCTCTATTTTAAAGTAAAAGTCTACCACCGAATCCCT AGTCCCCCTGTTTTCTGTTTCTTCTTGTGATTGCTGCCATAATTCTAAGTTATTTACTTTTACCACTATTTAAGTTATCAACTTTAGCTA GTATCTTCAAACTTTCACTTTGAAAAATGAGAATTTTATATTCTAAGCCAGTTTTCATTTTGGTTTTGTGTTTTGGTTAATAAAACAATA >In-frame_OCLN_ENST00000538151_chr5_68809936_+_CCNB1_ENST00000256442_chr5_68467097_+_1809nt GGCATTGCTCATCCTGAAGATCAGCTGACCATTGACAATCAGCCATGTCATCCAGGCCTCTTGAAAGTCCACCTCCTTACAGGCCTGATG AATTGCCATTGCCATTGTACTGGGGTTCATGATTATTGTGGCTTTTGCTTTAATAATTTTCTTTGCTGTGAAAACTCGAAGAAAGATGGA CAGGTATGACAAGTCCAATATTTTGTGGGACAAGGAACACATTTATGATGAGCAGCCCCCCAATGTCGAGGAGTGGGTTGATACTGCCTC TCCAAGCCCAATGGAAACATCTGGATGTGCCCCTGCAGAAGAAGACCTGTGTCAGGCTTTCTCTGATGTAATTCTTGCAGTAAATGATGT GGATGCAGAAGATGGAGCTGATCCAAACCTTTGTAGTGAATATGTGAAAGATATTTATGCTTATCTGAGACAACTTGAGGAAGAGCAAGC AGTCAGACCAAAATACCTACTGGGTCGGGAAGTCACTGGAAACATGAGAGCCATCCTAATTGACTGGCTAGTACAGGTTCAAATGAAATT CAGGTTGTTGCAGGAGACCATGTACATGACTGTCTCCATTATTGATCGGTTCATGCAGAATAATTGTGTGCCCAAGAAGATGCTGCAGCT GGTTGGTGTCACTGCCATGTTTATTGCAAGCAAATATGAAGAAATGTACCCTCCAGAAATTGGTGACTTTGCTTTTGTGACTGACAACAC TTATACTAAGCACCAAATCAGACAGATGGAAATGAAGATTCTAAGAGCTTTAAACTTTGGTCTGGGTCGGCCTCTACCTTTGCACTTCCT TCGGAGAGCATCTAAGATTGGAGAGGTTGATGTCGAGCAACATACTTTGGCCAAATACCTGATGGAACTAACTATGTTGGACTATGACAT GGTGCACTTTCCTCCTTCTCAAATTGCAGCAGGAGCTTTTTGCTTAGCACTGAAAATTCTGGATAATGGTGAATGGACACCAACTCTACA ACATTACCTGTCATATACTGAAGAATCTCTTCTTCCAGTTATGCAGCACCTGGCTAAGAATGTAGTCATGGTAAATCAAGGACTTACAAA GCACATGACTGTCAAGAACAAGTATGCCACATCGAAGCATGCTAAGATCAGCACTCTACCACAGCTGAATTCTGCACTAGTTCAAGATTT AGCCAAGGCTGTGGCAAAGGTGTAACTTGTAAACTTGAGTTGGAGTACTATATTTACAAATAAAATTGGCACCATGTGCCATCTGTACAT ATTACTGTTGCATTTACTTTTAATAAAGCTTGTGGCCCCTTTTACTTTTTTATAGCTTAACTAATTTGAATGTGGTTACTTCCTACTGTA GGGTAGCGGAAAAGTTGTCTTAAAAGGTATGGTGGGGATATTTTTAAAAACTCCTTTTGGTTTACCTGGGGATCCAATTGATGTATATGT TTATATACTGGGTTCTTGTTTTATATACCTGGCTTTTACTTTATTAATATGAGTTACTGAAGGTGATGGAGGTATTTGAAAATTTTACTT CCATAGGACATACTGCATGTAAGCCAAGTCATGGAGAATCTGCTGCATAGCTCTATTTTAAAGTAAAAGTCTACCACCGAATCCCTAGTC CCCCTGTTTTCTGTTTCTTCTTGTGATTGCTGCCATAATTCTAAGTTATTTACTTTTACCACTATTTAAGTTATCAACTTTAGCTAGTAT CTTCAAACTTTCACTTTGAAAAATGAGAATTTTATATTCTAAGCCAGTTTTCATTTTGGTTTTGTGTTTTGGTTAATAAAACAATACTCA |
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FusionGenePPI for OCLN_CCNB1 |
Go to ChiPPI (Chimeric Protein-Protein interactions) to see the chimeric PPI interaction in . |
Protein-protein interactors with each fusion partner protein in wild-type (BIOGRID-3.4.160) |
Hgene | Hgene's interactors | Tgene | Tgene's interactors |
OCLN | TJP2, RAB8B, YES1, TJP1, GJB1, ITCH, EPN1, EPS15, HGS, NEDD4L, TGFBR1, TGFBR2, LYN, TNFAIP3, CLEC7A, SYNE4, SNW1, CSNK1E, ULK1, CSNK1A1, MPZL2, CD1B, TMEM171, IGSF8, SLAMF1, DLK1, SLC18A1, TMEM17, TMEM216, FATE1, CDH1, PTPN2, FBLN1, MFAP4, CTAGE5, TMEM30B, C4A, SDC1, SIGLECL1, NEDD4, NDUFAF1, TNFSF8, ANTXR1, ACAD9, EFEMP1, SYT12, DNAJC13, PREB, MAN1A1, TNFSF9, CSNK2A1, OCLN | CCNB1 | RALBP1, CDK2, CDK1, HERC5, CDC25A, TGFBR2, BRCA1, CDC25C, GADD45A, GADD45B, GADD45G, CCNF, CDKN1A, CDC14A, ZC3HC1, CDC27, TSPYL2, GAPDH, SET, MGMT, FOXM1, ARID4A, CDC20, UHRF2, UBE2K, FZR1, UBE3D, E2F3, PCNA, HIST1H1A, PSMA6, SP1, RPA1, SKP2, ANAPC4, CDC16, PPP1CA, PPP1CB, PPP1CC, USP37, CAND1, CKS1B, CKS2, RPTOR, CDT1, HIST1H1B, NDC80, SDHAF2, PRC1, RB1, MFN1, MARCH5, VCP, CCNB1IP1, TP73, CDC6, CDK7, TP53BP1, POLA1, ANAPC11, PTMA, SQSTM1, CDK5, RHOBTB3, SIRT1, BTRC, EP300, RELA, UBE2D2, GAS2L1, CCNB2, DIAPH3, HNRNPLL, RNASEH2C, OFD1, PCM1, CEP170, CEP162, SPICE1, CEP128, CNTRL, FBF1, NIN, DCTN1, XPO1, KIF22, LLGL2, CHST15, KLC3, CDKN1B, NCBP1, PRDX1, RPS3, KAT6A, FXR1, AKR7A2, PKMYT1, KEAP1, PDCD6, PRDX3, SLC27A2, ALKBH8, TARSL2, ANAPC10, ESPL1, FOXO1, UBE3C, PARK2, PRKDC, CCDC6, SNW1, CDC5L, OTUB1, TRIM28, CCAR1, CDK3, BCLAF1, STK38, RPS18, STAU1, GRWD1, DNMT1, HDAC1, USP22, USP14, CDC25B, PRPSAP2, IKZF5, ZADH2, LRRFIP1, NGB, PARVA, PTPDC1, PTCH1 |
- Retained PPIs in in-frame fusion. |
Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Still interaction with |
Tgene | CCNB1 | chr5:68809936 | chr5:68467097 | ENST00000256442 | + | 2 | 9 | 169_177 | 121 | 434 | CDK2 |
Tgene | CCNB1 | chr5:68809936 | chr5:68467097 | ENST00000256442 | + | 2 | 9 | 258_261 | 121 | 434 | CDK2 |
- Lost PPIs in in-frame fusion. |
Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Interaction lost with |
- Retained PPIs, but lost function due to frame-shift fusion. |
Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Interaction lost with |
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RelatedDrugs for OCLN_CCNB1 |
Drugs targeting genes involved in this fusion gene. (DrugBank Version 5.1.0 2018-04-02) |
Partner | Gene | UniProtAcc | DrugBank ID | Drug name | Drug activity | Drug type | Drug status |
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RelatedDiseases for OCLN_CCNB1 |
Diseases associated with fusion partners. (DisGeNet 4.0) |
Partner | Gene | Disease ID | Disease name | # pubmeds | Source |
Hgene | OCLN | C1458155 | Mammary Neoplasms | 2 | CTD_human |
Hgene | OCLN | C0007621 | Neoplastic Cell Transformation | 1 | CTD_human |
Hgene | OCLN | C0019156 | Hepatic Veno-Occlusive Disease | 1 | CTD_human |
Hgene | OCLN | C0035309 | Retinal Diseases | 1 | CTD_human |
Hgene | OCLN | C0038002 | Splenomegaly | 1 | CTD_human |
Hgene | OCLN | C2609414 | Acute kidney injury | 1 | CTD_human |
Hgene | OCLN | C3489725 | Pseudo-TORCH syndrome | 1 | CTD_human;ORPHANET;UNIPROT |
Tgene | CCNB1 | C0032460 | Polycystic Ovary Syndrome | 1 | CTD_human |