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Fusion gene ID: 25264 |
FusionGeneSummary for NUP98_RAP1GDS1 |
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Fusion gene information | Fusion gene name: NUP98_RAP1GDS1 | Fusion gene ID: 25264 | Hgene | Tgene | Gene symbol | NUP98 | RAP1GDS1 | Gene ID | 4928 | 5910 |
Gene name | nucleoporin 98 | Rap1 GTPase-GDP dissociation stimulator 1 | |
Synonyms | ADIR2|NUP196|NUP96 | GDS1|SmgGDS | |
Cytomap | 11p15.4 | 4q23 | |
Type of gene | protein-coding | protein-coding | |
Description | nuclear pore complex protein Nup98-Nup96nuclear pore complex protein Nup98GLFG-repeat containing nucleoporinNUP98/PHF23 fusion 2 proteinNup98-Nup96nucleoporin 98kDnucleoporin 98kDa | rap1 GTPase-GDP dissociation stimulator 1RAP1, GTP-GDP dissociation stimulator 1SMG GDS proteinSMG P21 stimulatory GDP/GTP exchange proteinexchange factor smgGDS | |
Modification date | 20180523 | 20180523 | |
UniProtAcc | P52948 | P52306 | |
Ensembl transtripts involved in fusion gene | ENST00000324932, ENST00000359171, ENST00000355260, ENST00000397004, ENST00000397007, ENST00000488828, | ENST00000380158, ENST00000264572, ENST00000408927, ENST00000512857, ENST00000453712, ENST00000339360, ENST00000408900, | |
Fusion gene scores | * DoF score | 16 X 12 X 7=1344 | 3 X 5 X 1=15 |
# samples | 21 | 5 | |
** MAII score | log2(21/1344*10)=-2.67807190511264 possibly effective Gene in Pan-Cancer Fusion Genes (peGinPCFGs). DoF>8 and MAII<0 | log2(5/15*10)=1.73696559416621 effective Gene in Pan-Cancer Fusion Genes (eGinPCFGs). DoF>8 and MAII>0 | |
Context | PubMed: NUP98 [Title/Abstract] AND RAP1GDS1 [Title/Abstract] AND fusion [Title/Abstract] | ||
Functional or gene categories assigned by FusionGDB annotation | Tumor suppressor gene involved fusion gene, retained protein feature but frameshift. DDR (DNA damage repair) gene involved fusion gene, in-frame but not retained their domain. |
* DoF score (Degree of Frequency) = # partners X # break points X # cancer types ** MAII score (Major Active Isofusion Index) = log2(# samples/DoF score*10) |
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Partner | Gene | GO ID | GO term | PubMed ID |
![]() (ChiTars (NAR, 2018), tumorfusions (NAR, 2018), Gao et al. (Cell, 2018)) * All genome coordinats were lifted-over on hg19. * Click on the break point to see the gene structure around the break point region using the UCSC Genome Browser. |
Data type | Source | Cancer type | Sample | Hgene | Hchr | Hbp | Hstrand | Tgene | Tchr | Tbp | Tstrand |
ChiTaRS3.1 | AF133331 | NUP98 | chr11 | 3765739 | - | RAP1GDS1 | chr4 | 99214557 | + | ||
ChiTaRS3.1 | AF133334 | NUP98 | chr11 | 3781769 | - | RAP1GDS1 | chr4 | 99214548 | + | ||
ChiTaRS3.1 | AF133332 | NUP98 | chr11 | 3765739 | - | RAP1GDS1 | chr4 | 99214554 | + |
* LD: Li Ding group's fusion gene list RV: Roel Verhaak group's fusion gene list ChiTaRs fusion database |
![]() * Click on the break point to see the gene structure around the break point region using the UCSC Genome Browser. |
ORF | Henst | Tenst | Hgene | Hchr | Hbp | Hstrand | Tgene | Tchr | Tbp | Tstrand |
Frame-shift | ENST00000324932 | ENST00000380158 | NUP98 | chr11 | 3765739 | - | RAP1GDS1 | chr4 | 99214557 | + |
Frame-shift | ENST00000324932 | ENST00000264572 | NUP98 | chr11 | 3765739 | - | RAP1GDS1 | chr4 | 99214557 | + |
Frame-shift | ENST00000324932 | ENST00000408927 | NUP98 | chr11 | 3765739 | - | RAP1GDS1 | chr4 | 99214557 | + |
5CDS-3UTR | ENST00000324932 | ENST00000512857 | NUP98 | chr11 | 3765739 | - | RAP1GDS1 | chr4 | 99214557 | + |
5CDS-3UTR | ENST00000324932 | ENST00000453712 | NUP98 | chr11 | 3765739 | - | RAP1GDS1 | chr4 | 99214557 | + |
5CDS-3UTR | ENST00000324932 | ENST00000339360 | NUP98 | chr11 | 3765739 | - | RAP1GDS1 | chr4 | 99214557 | + |
5CDS-3UTR | ENST00000324932 | ENST00000408900 | NUP98 | chr11 | 3765739 | - | RAP1GDS1 | chr4 | 99214557 | + |
Frame-shift | ENST00000359171 | ENST00000380158 | NUP98 | chr11 | 3765739 | - | RAP1GDS1 | chr4 | 99214557 | + |
Frame-shift | ENST00000359171 | ENST00000264572 | NUP98 | chr11 | 3765739 | - | RAP1GDS1 | chr4 | 99214557 | + |
Frame-shift | ENST00000359171 | ENST00000408927 | NUP98 | chr11 | 3765739 | - | RAP1GDS1 | chr4 | 99214557 | + |
5CDS-3UTR | ENST00000359171 | ENST00000512857 | NUP98 | chr11 | 3765739 | - | RAP1GDS1 | chr4 | 99214557 | + |
5CDS-3UTR | ENST00000359171 | ENST00000453712 | NUP98 | chr11 | 3765739 | - | RAP1GDS1 | chr4 | 99214557 | + |
5CDS-3UTR | ENST00000359171 | ENST00000339360 | NUP98 | chr11 | 3765739 | - | RAP1GDS1 | chr4 | 99214557 | + |
5CDS-3UTR | ENST00000359171 | ENST00000408900 | NUP98 | chr11 | 3765739 | - | RAP1GDS1 | chr4 | 99214557 | + |
Frame-shift | ENST00000355260 | ENST00000380158 | NUP98 | chr11 | 3765739 | - | RAP1GDS1 | chr4 | 99214557 | + |
Frame-shift | ENST00000355260 | ENST00000264572 | NUP98 | chr11 | 3765739 | - | RAP1GDS1 | chr4 | 99214557 | + |
Frame-shift | ENST00000355260 | ENST00000408927 | NUP98 | chr11 | 3765739 | - | RAP1GDS1 | chr4 | 99214557 | + |
5CDS-3UTR | ENST00000355260 | ENST00000512857 | NUP98 | chr11 | 3765739 | - | RAP1GDS1 | chr4 | 99214557 | + |
5CDS-3UTR | ENST00000355260 | ENST00000453712 | NUP98 | chr11 | 3765739 | - | RAP1GDS1 | chr4 | 99214557 | + |
5CDS-3UTR | ENST00000355260 | ENST00000339360 | NUP98 | chr11 | 3765739 | - | RAP1GDS1 | chr4 | 99214557 | + |
5CDS-3UTR | ENST00000355260 | ENST00000408900 | NUP98 | chr11 | 3765739 | - | RAP1GDS1 | chr4 | 99214557 | + |
Frame-shift | ENST00000397004 | ENST00000380158 | NUP98 | chr11 | 3765739 | - | RAP1GDS1 | chr4 | 99214557 | + |
Frame-shift | ENST00000397004 | ENST00000264572 | NUP98 | chr11 | 3765739 | - | RAP1GDS1 | chr4 | 99214557 | + |
Frame-shift | ENST00000397004 | ENST00000408927 | NUP98 | chr11 | 3765739 | - | RAP1GDS1 | chr4 | 99214557 | + |
5CDS-3UTR | ENST00000397004 | ENST00000512857 | NUP98 | chr11 | 3765739 | - | RAP1GDS1 | chr4 | 99214557 | + |
5CDS-3UTR | ENST00000397004 | ENST00000453712 | NUP98 | chr11 | 3765739 | - | RAP1GDS1 | chr4 | 99214557 | + |
5CDS-3UTR | ENST00000397004 | ENST00000339360 | NUP98 | chr11 | 3765739 | - | RAP1GDS1 | chr4 | 99214557 | + |
5CDS-3UTR | ENST00000397004 | ENST00000408900 | NUP98 | chr11 | 3765739 | - | RAP1GDS1 | chr4 | 99214557 | + |
Frame-shift | ENST00000397007 | ENST00000380158 | NUP98 | chr11 | 3765739 | - | RAP1GDS1 | chr4 | 99214557 | + |
Frame-shift | ENST00000397007 | ENST00000264572 | NUP98 | chr11 | 3765739 | - | RAP1GDS1 | chr4 | 99214557 | + |
Frame-shift | ENST00000397007 | ENST00000408927 | NUP98 | chr11 | 3765739 | - | RAP1GDS1 | chr4 | 99214557 | + |
5CDS-3UTR | ENST00000397007 | ENST00000512857 | NUP98 | chr11 | 3765739 | - | RAP1GDS1 | chr4 | 99214557 | + |
5CDS-3UTR | ENST00000397007 | ENST00000453712 | NUP98 | chr11 | 3765739 | - | RAP1GDS1 | chr4 | 99214557 | + |
5CDS-3UTR | ENST00000397007 | ENST00000339360 | NUP98 | chr11 | 3765739 | - | RAP1GDS1 | chr4 | 99214557 | + |
5CDS-3UTR | ENST00000397007 | ENST00000408900 | NUP98 | chr11 | 3765739 | - | RAP1GDS1 | chr4 | 99214557 | + |
intron-3CDS | ENST00000488828 | ENST00000380158 | NUP98 | chr11 | 3765739 | - | RAP1GDS1 | chr4 | 99214557 | + |
intron-3CDS | ENST00000488828 | ENST00000264572 | NUP98 | chr11 | 3765739 | - | RAP1GDS1 | chr4 | 99214557 | + |
intron-3CDS | ENST00000488828 | ENST00000408927 | NUP98 | chr11 | 3765739 | - | RAP1GDS1 | chr4 | 99214557 | + |
intron-3UTR | ENST00000488828 | ENST00000512857 | NUP98 | chr11 | 3765739 | - | RAP1GDS1 | chr4 | 99214557 | + |
intron-3UTR | ENST00000488828 | ENST00000453712 | NUP98 | chr11 | 3765739 | - | RAP1GDS1 | chr4 | 99214557 | + |
intron-3UTR | ENST00000488828 | ENST00000339360 | NUP98 | chr11 | 3765739 | - | RAP1GDS1 | chr4 | 99214557 | + |
intron-3UTR | ENST00000488828 | ENST00000408900 | NUP98 | chr11 | 3765739 | - | RAP1GDS1 | chr4 | 99214557 | + |
5CDS-intron | ENST00000324932 | ENST00000380158 | NUP98 | chr11 | 3781769 | - | RAP1GDS1 | chr4 | 99214548 | + |
5CDS-intron | ENST00000324932 | ENST00000264572 | NUP98 | chr11 | 3781769 | - | RAP1GDS1 | chr4 | 99214548 | + |
5CDS-intron | ENST00000324932 | ENST00000408927 | NUP98 | chr11 | 3781769 | - | RAP1GDS1 | chr4 | 99214548 | + |
5CDS-intron | ENST00000324932 | ENST00000512857 | NUP98 | chr11 | 3781769 | - | RAP1GDS1 | chr4 | 99214548 | + |
5CDS-intron | ENST00000324932 | ENST00000453712 | NUP98 | chr11 | 3781769 | - | RAP1GDS1 | chr4 | 99214548 | + |
5CDS-intron | ENST00000324932 | ENST00000339360 | NUP98 | chr11 | 3781769 | - | RAP1GDS1 | chr4 | 99214548 | + |
5CDS-intron | ENST00000324932 | ENST00000408900 | NUP98 | chr11 | 3781769 | - | RAP1GDS1 | chr4 | 99214548 | + |
5CDS-intron | ENST00000359171 | ENST00000380158 | NUP98 | chr11 | 3781769 | - | RAP1GDS1 | chr4 | 99214548 | + |
5CDS-intron | ENST00000359171 | ENST00000264572 | NUP98 | chr11 | 3781769 | - | RAP1GDS1 | chr4 | 99214548 | + |
5CDS-intron | ENST00000359171 | ENST00000408927 | NUP98 | chr11 | 3781769 | - | RAP1GDS1 | chr4 | 99214548 | + |
5CDS-intron | ENST00000359171 | ENST00000512857 | NUP98 | chr11 | 3781769 | - | RAP1GDS1 | chr4 | 99214548 | + |
5CDS-intron | ENST00000359171 | ENST00000453712 | NUP98 | chr11 | 3781769 | - | RAP1GDS1 | chr4 | 99214548 | + |
5CDS-intron | ENST00000359171 | ENST00000339360 | NUP98 | chr11 | 3781769 | - | RAP1GDS1 | chr4 | 99214548 | + |
5CDS-intron | ENST00000359171 | ENST00000408900 | NUP98 | chr11 | 3781769 | - | RAP1GDS1 | chr4 | 99214548 | + |
5CDS-intron | ENST00000355260 | ENST00000380158 | NUP98 | chr11 | 3781769 | - | RAP1GDS1 | chr4 | 99214548 | + |
5CDS-intron | ENST00000355260 | ENST00000264572 | NUP98 | chr11 | 3781769 | - | RAP1GDS1 | chr4 | 99214548 | + |
5CDS-intron | ENST00000355260 | ENST00000408927 | NUP98 | chr11 | 3781769 | - | RAP1GDS1 | chr4 | 99214548 | + |
5CDS-intron | ENST00000355260 | ENST00000512857 | NUP98 | chr11 | 3781769 | - | RAP1GDS1 | chr4 | 99214548 | + |
5CDS-intron | ENST00000355260 | ENST00000453712 | NUP98 | chr11 | 3781769 | - | RAP1GDS1 | chr4 | 99214548 | + |
5CDS-intron | ENST00000355260 | ENST00000339360 | NUP98 | chr11 | 3781769 | - | RAP1GDS1 | chr4 | 99214548 | + |
5CDS-intron | ENST00000355260 | ENST00000408900 | NUP98 | chr11 | 3781769 | - | RAP1GDS1 | chr4 | 99214548 | + |
5CDS-intron | ENST00000397004 | ENST00000380158 | NUP98 | chr11 | 3781769 | - | RAP1GDS1 | chr4 | 99214548 | + |
5CDS-intron | ENST00000397004 | ENST00000264572 | NUP98 | chr11 | 3781769 | - | RAP1GDS1 | chr4 | 99214548 | + |
5CDS-intron | ENST00000397004 | ENST00000408927 | NUP98 | chr11 | 3781769 | - | RAP1GDS1 | chr4 | 99214548 | + |
5CDS-intron | ENST00000397004 | ENST00000512857 | NUP98 | chr11 | 3781769 | - | RAP1GDS1 | chr4 | 99214548 | + |
5CDS-intron | ENST00000397004 | ENST00000453712 | NUP98 | chr11 | 3781769 | - | RAP1GDS1 | chr4 | 99214548 | + |
5CDS-intron | ENST00000397004 | ENST00000339360 | NUP98 | chr11 | 3781769 | - | RAP1GDS1 | chr4 | 99214548 | + |
5CDS-intron | ENST00000397004 | ENST00000408900 | NUP98 | chr11 | 3781769 | - | RAP1GDS1 | chr4 | 99214548 | + |
intron-intron | ENST00000397007 | ENST00000380158 | NUP98 | chr11 | 3781769 | - | RAP1GDS1 | chr4 | 99214548 | + |
intron-intron | ENST00000397007 | ENST00000264572 | NUP98 | chr11 | 3781769 | - | RAP1GDS1 | chr4 | 99214548 | + |
intron-intron | ENST00000397007 | ENST00000408927 | NUP98 | chr11 | 3781769 | - | RAP1GDS1 | chr4 | 99214548 | + |
intron-intron | ENST00000397007 | ENST00000512857 | NUP98 | chr11 | 3781769 | - | RAP1GDS1 | chr4 | 99214548 | + |
intron-intron | ENST00000397007 | ENST00000453712 | NUP98 | chr11 | 3781769 | - | RAP1GDS1 | chr4 | 99214548 | + |
intron-intron | ENST00000397007 | ENST00000339360 | NUP98 | chr11 | 3781769 | - | RAP1GDS1 | chr4 | 99214548 | + |
intron-intron | ENST00000397007 | ENST00000408900 | NUP98 | chr11 | 3781769 | - | RAP1GDS1 | chr4 | 99214548 | + |
intron-intron | ENST00000488828 | ENST00000380158 | NUP98 | chr11 | 3781769 | - | RAP1GDS1 | chr4 | 99214548 | + |
intron-intron | ENST00000488828 | ENST00000264572 | NUP98 | chr11 | 3781769 | - | RAP1GDS1 | chr4 | 99214548 | + |
intron-intron | ENST00000488828 | ENST00000408927 | NUP98 | chr11 | 3781769 | - | RAP1GDS1 | chr4 | 99214548 | + |
intron-intron | ENST00000488828 | ENST00000512857 | NUP98 | chr11 | 3781769 | - | RAP1GDS1 | chr4 | 99214548 | + |
intron-intron | ENST00000488828 | ENST00000453712 | NUP98 | chr11 | 3781769 | - | RAP1GDS1 | chr4 | 99214548 | + |
intron-intron | ENST00000488828 | ENST00000339360 | NUP98 | chr11 | 3781769 | - | RAP1GDS1 | chr4 | 99214548 | + |
intron-intron | ENST00000488828 | ENST00000408900 | NUP98 | chr11 | 3781769 | - | RAP1GDS1 | chr4 | 99214548 | + |
Frame-shift | ENST00000324932 | ENST00000380158 | NUP98 | chr11 | 3765739 | - | RAP1GDS1 | chr4 | 99214554 | + |
Frame-shift | ENST00000324932 | ENST00000264572 | NUP98 | chr11 | 3765739 | - | RAP1GDS1 | chr4 | 99214554 | + |
Frame-shift | ENST00000324932 | ENST00000408927 | NUP98 | chr11 | 3765739 | - | RAP1GDS1 | chr4 | 99214554 | + |
5CDS-3UTR | ENST00000324932 | ENST00000512857 | NUP98 | chr11 | 3765739 | - | RAP1GDS1 | chr4 | 99214554 | + |
5CDS-3UTR | ENST00000324932 | ENST00000453712 | NUP98 | chr11 | 3765739 | - | RAP1GDS1 | chr4 | 99214554 | + |
5CDS-3UTR | ENST00000324932 | ENST00000339360 | NUP98 | chr11 | 3765739 | - | RAP1GDS1 | chr4 | 99214554 | + |
5CDS-3UTR | ENST00000324932 | ENST00000408900 | NUP98 | chr11 | 3765739 | - | RAP1GDS1 | chr4 | 99214554 | + |
Frame-shift | ENST00000359171 | ENST00000380158 | NUP98 | chr11 | 3765739 | - | RAP1GDS1 | chr4 | 99214554 | + |
Frame-shift | ENST00000359171 | ENST00000264572 | NUP98 | chr11 | 3765739 | - | RAP1GDS1 | chr4 | 99214554 | + |
Frame-shift | ENST00000359171 | ENST00000408927 | NUP98 | chr11 | 3765739 | - | RAP1GDS1 | chr4 | 99214554 | + |
5CDS-3UTR | ENST00000359171 | ENST00000512857 | NUP98 | chr11 | 3765739 | - | RAP1GDS1 | chr4 | 99214554 | + |
5CDS-3UTR | ENST00000359171 | ENST00000453712 | NUP98 | chr11 | 3765739 | - | RAP1GDS1 | chr4 | 99214554 | + |
5CDS-3UTR | ENST00000359171 | ENST00000339360 | NUP98 | chr11 | 3765739 | - | RAP1GDS1 | chr4 | 99214554 | + |
5CDS-3UTR | ENST00000359171 | ENST00000408900 | NUP98 | chr11 | 3765739 | - | RAP1GDS1 | chr4 | 99214554 | + |
Frame-shift | ENST00000355260 | ENST00000380158 | NUP98 | chr11 | 3765739 | - | RAP1GDS1 | chr4 | 99214554 | + |
Frame-shift | ENST00000355260 | ENST00000264572 | NUP98 | chr11 | 3765739 | - | RAP1GDS1 | chr4 | 99214554 | + |
Frame-shift | ENST00000355260 | ENST00000408927 | NUP98 | chr11 | 3765739 | - | RAP1GDS1 | chr4 | 99214554 | + |
5CDS-3UTR | ENST00000355260 | ENST00000512857 | NUP98 | chr11 | 3765739 | - | RAP1GDS1 | chr4 | 99214554 | + |
5CDS-3UTR | ENST00000355260 | ENST00000453712 | NUP98 | chr11 | 3765739 | - | RAP1GDS1 | chr4 | 99214554 | + |
5CDS-3UTR | ENST00000355260 | ENST00000339360 | NUP98 | chr11 | 3765739 | - | RAP1GDS1 | chr4 | 99214554 | + |
5CDS-3UTR | ENST00000355260 | ENST00000408900 | NUP98 | chr11 | 3765739 | - | RAP1GDS1 | chr4 | 99214554 | + |
Frame-shift | ENST00000397004 | ENST00000380158 | NUP98 | chr11 | 3765739 | - | RAP1GDS1 | chr4 | 99214554 | + |
Frame-shift | ENST00000397004 | ENST00000264572 | NUP98 | chr11 | 3765739 | - | RAP1GDS1 | chr4 | 99214554 | + |
Frame-shift | ENST00000397004 | ENST00000408927 | NUP98 | chr11 | 3765739 | - | RAP1GDS1 | chr4 | 99214554 | + |
5CDS-3UTR | ENST00000397004 | ENST00000512857 | NUP98 | chr11 | 3765739 | - | RAP1GDS1 | chr4 | 99214554 | + |
5CDS-3UTR | ENST00000397004 | ENST00000453712 | NUP98 | chr11 | 3765739 | - | RAP1GDS1 | chr4 | 99214554 | + |
5CDS-3UTR | ENST00000397004 | ENST00000339360 | NUP98 | chr11 | 3765739 | - | RAP1GDS1 | chr4 | 99214554 | + |
5CDS-3UTR | ENST00000397004 | ENST00000408900 | NUP98 | chr11 | 3765739 | - | RAP1GDS1 | chr4 | 99214554 | + |
Frame-shift | ENST00000397007 | ENST00000380158 | NUP98 | chr11 | 3765739 | - | RAP1GDS1 | chr4 | 99214554 | + |
Frame-shift | ENST00000397007 | ENST00000264572 | NUP98 | chr11 | 3765739 | - | RAP1GDS1 | chr4 | 99214554 | + |
Frame-shift | ENST00000397007 | ENST00000408927 | NUP98 | chr11 | 3765739 | - | RAP1GDS1 | chr4 | 99214554 | + |
5CDS-3UTR | ENST00000397007 | ENST00000512857 | NUP98 | chr11 | 3765739 | - | RAP1GDS1 | chr4 | 99214554 | + |
5CDS-3UTR | ENST00000397007 | ENST00000453712 | NUP98 | chr11 | 3765739 | - | RAP1GDS1 | chr4 | 99214554 | + |
5CDS-3UTR | ENST00000397007 | ENST00000339360 | NUP98 | chr11 | 3765739 | - | RAP1GDS1 | chr4 | 99214554 | + |
5CDS-3UTR | ENST00000397007 | ENST00000408900 | NUP98 | chr11 | 3765739 | - | RAP1GDS1 | chr4 | 99214554 | + |
intron-3CDS | ENST00000488828 | ENST00000380158 | NUP98 | chr11 | 3765739 | - | RAP1GDS1 | chr4 | 99214554 | + |
intron-3CDS | ENST00000488828 | ENST00000264572 | NUP98 | chr11 | 3765739 | - | RAP1GDS1 | chr4 | 99214554 | + |
intron-3CDS | ENST00000488828 | ENST00000408927 | NUP98 | chr11 | 3765739 | - | RAP1GDS1 | chr4 | 99214554 | + |
intron-3UTR | ENST00000488828 | ENST00000512857 | NUP98 | chr11 | 3765739 | - | RAP1GDS1 | chr4 | 99214554 | + |
intron-3UTR | ENST00000488828 | ENST00000453712 | NUP98 | chr11 | 3765739 | - | RAP1GDS1 | chr4 | 99214554 | + |
intron-3UTR | ENST00000488828 | ENST00000339360 | NUP98 | chr11 | 3765739 | - | RAP1GDS1 | chr4 | 99214554 | + |
intron-3UTR | ENST00000488828 | ENST00000408900 | NUP98 | chr11 | 3765739 | - | RAP1GDS1 | chr4 | 99214554 | + |
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FusionProtFeatures for NUP98_RAP1GDS1 |
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Hgene | Tgene |
NUP98 | RAP1GDS1 |
![]() * Minus value of BPloci means that the break pointn is located before the CDS. |
- In-frame and retained protein feature among the 13 regional features. |
Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Protein feature | Protein feature note |
- In-frame and not-retained protein feature among the 13 regional features. |
Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Protein feature | Protein feature note |
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FusionGeneSequence for NUP98_RAP1GDS1 |
![]() (nt: nucleotides, aa: amino acids) |
* Fusion amino acid sequences. |
* Fusion transcript sequences (only coding sequence (CDS) region). |
* Fusion transcript sequences (Full-length transcript). |
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FusionGenePPI for NUP98_RAP1GDS1 |
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Hgene | Hgene's interactors | Tgene | Tgene's interactors |
NUP98 | MOB1A, PARP11, QRICH2, TPR, NUP88, CREBBP, EP300, NUP133, KPNB1, RAE1, TNPO2, NXF1, TNPO1, USP7, NPM1, PTTG1, APC, HDAC1, SIRT7, NUP107, CTNNB1, RAPGEF3, NUMA1, ECT2, CSNK2A1, HNRNPUL1, LMNA, HDAC8, HDAC11, FBXO6, ARFGEF2, CDC73, PAF1, CDC37, CUL7, OBSL1, EED, MAPK8, COMTD1, SEC13, PNKD, NUP43, CLEC11A, RNF166, UNK, NUP54, NUP85, SEH1L, XPO5, KRAS, IFI16, NUP160, NUP35, B9D2, UBE2I, NUPL1, NUP153, PIM2, NUDT21, NCBP2, CHMP4B, GTF2H5, FOXI2, FOXL1, FOXQ1, FAF1, C11orf30, DUSP13, SPAST, FAM136A, UXS1, CD70, VASN, TRIM25, G3BP1, CDC27, ANAPC4, ANAPC10, MAD2L1, CDC20, FZR1, PIN1 | RAP1GDS1 | NRAS, RHOA, RAP1A, HRAS, KRAS, RAC1, MBIP, ZNF451, KIFAP3, EGFR, CDC42, DCPS, GAPDH, GINS3, HSPA1L, NAE1, OLA1, PAFAH1B2, PPP1R2, PTMA, ABHD14A, ASNS, CAPN1, ECHS1, GMDS, GSS, HSPA5, HSPA9, MSN, PDIA4, PFAS, PPP5C, TATDN1, UBQLN1, USP14, VCL, YWHAE, DOC2A, PLEKHB1, MOV10, DIRAS3, RAB34, RASD2, HDAC7, APBB2, RAB1B, SNX24, GNAI1, GNAZ, SEPT12, TSC22D4, RAB31, RASL10A, SEPT6, BAIAP2, HSPB9, C2orf48, UNC45A, NTRK1, PUF60, CDK2, DUSP23, DIRAS1, UBTF, DIRAS2, RAC3, PRDM10, RAP2C, RAP1B, DNAL1, RHOF, RHOC, RAB15, RABL3, RBM42, IRGC, VASH1, NKIRAS2, IL13RA1, RAC2, ARL4C, NT5C, TRIM25 |
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Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Still interaction with |
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Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Interaction lost with |
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Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Interaction lost with |
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RelatedDrugs for NUP98_RAP1GDS1 |
![]() (DrugBank Version 5.1.0 2018-04-02) |
Partner | Gene | UniProtAcc | DrugBank ID | Drug name | Drug activity | Drug type | Drug status |
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RelatedDiseases for NUP98_RAP1GDS1 |
![]() (DisGeNet 4.0) |
Partner | Gene | Disease ID | Disease name | # pubmeds | Source |
Hgene | NUP98 | C0023467 | Leukemia, Myelocytic, Acute | 1 | CTD_human |