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Center for Computational Systems Medicine
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FusionGeneSummary

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FusionProtFeature

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FusionGeneSequence

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Fusion gene ID: 25067

FusionGeneSummary for NUDCD1_TMEM184C

check button Fusion gene summary
Fusion gene informationFusion gene name: NUDCD1_TMEM184C
Fusion gene ID: 25067
HgeneTgene
Gene symbol

NUDCD1

TMEM184C

Gene ID

84955

55751

Gene nameNudC domain containing 1transmembrane protein 184C
SynonymsCML66|OVA66TMEM34
Cytomap

8q23.1

4q31.23

Type of geneprotein-codingprotein-coding
DescriptionnudC domain-containing protein 1chronic myelogenous leukemia tumor antigen 66tumor antigen CML66transmembrane protein 184Ctransmembrane protein 34
Modification date2018051920180523
UniProtAcc

Q96RS6

Q9NVA4

Ensembl transtripts involved in fusion geneENST00000239690, ENST00000427660, 
ENST00000296582, ENST00000508208, 
Fusion gene scores* DoF score5 X 3 X 4=603 X 2 X 4=24
# samples 55
** MAII scorelog2(5/60*10)=-0.263034405833794
possibly effective Gene in Pan-Cancer Fusion Genes (peGinPCFGs).
DoF>8 and MAII<0
log2(5/24*10)=1.05889368905357
effective Gene in Pan-Cancer Fusion Genes (eGinPCFGs).
DoF>8 and MAII>0
Context

PubMed: NUDCD1 [Title/Abstract] AND TMEM184C [Title/Abstract] AND fusion [Title/Abstract]

Functional or gene categories assigned by FusionGDB annotation
* DoF score (Degree of Frequency) = # partners X # break points X # cancer types
** MAII score (Major Active Isofusion Index) = log2(# samples/DoF score*10)

check button Gene ontology of each fusion partner gene with evidence of Inferred from Direct Assay (IDA) from Entrez
PartnerGeneGO IDGO termPubMed ID

check button Fusion gene information from three resources
(ChiTars (NAR, 2018), tumorfusions (NAR, 2018), Gao et al. (Cell, 2018))
* All genome coordinats were lifted-over on hg19.
* Click on the break point to see the gene structure around the break point region using the UCSC Genome Browser.
Data typeSourceCancer typeSampleHgeneHchrHbpHstrandTgeneTchrTbpTstrand
TCGARVBRCATCGA-E2-A1LH-01ANUDCD1chr8

110334538

-TMEM184Cchr4

148544985

+
* LD: Li Ding group's fusion gene list
  RV: Roel Verhaak group's fusion gene list
  ChiTaRs fusion database

check button Open reading frame (ORF) analsis of fusion genes based on Ensembl gene isoform structure.
* Click on the break point to see the gene structure around the break point region using the UCSC Genome Browser.
ORFHenstTenstHgeneHchrHbpHstrandTgeneTchrTbpTstrand
In-frameENST00000239690ENST00000296582NUDCD1chr8

110334538

-TMEM184Cchr4

148544985

+
In-frameENST00000239690ENST00000508208NUDCD1chr8

110334538

-TMEM184Cchr4

148544985

+
In-frameENST00000427660ENST00000296582NUDCD1chr8

110334538

-TMEM184Cchr4

148544985

+
In-frameENST00000427660ENST00000508208NUDCD1chr8

110334538

-TMEM184Cchr4

148544985

+

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FusionProtFeatures for NUDCD1_TMEM184C


check buttonMain function of each fusion partner protein. (from UniProt)
HgeneTgene
NUDCD1

Q96RS6

TMEM184C

Q9NVA4

Possible tumor suppressor which may play a role in cellgrowth. {ECO:0000269|PubMed:17072649}.

check buttonRetention analysis result of each fusion partner protein across 39 protein features of UniProt such as six molecule processing features, 13 region features, four site features, six amino acid modification features, two natural variation features, five experimental info features, and 3 secondary structure features. Here, because of limited space for viewing, we only show the protein feature retention information belong to the 13 regional features. All retention annotation result can be downloaded at

download page

.

* Minus value of BPloci means that the break pointn is located before the CDS.
- In-frame and retained protein feature among the 13 regional features.
>>>>>>>>>>>>
PartnerGeneHbpTbpENSTStrandBPexonTotalExonProtein feature loci*BPlociTotalLenProtein featureProtein feature note
TgeneTMEM184Cchr8:110334538chr4:148544985ENST00000296582+010179_19941439TransmembraneHelical
TgeneTMEM184Cchr8:110334538chr4:148544985ENST00000296582+010212_23241439TransmembraneHelical
TgeneTMEM184Cchr8:110334538chr4:148544985ENST00000296582+010254_27441439TransmembraneHelical
TgeneTMEM184Cchr8:110334538chr4:148544985ENST00000296582+010287_30741439TransmembraneHelical
TgeneTMEM184Cchr8:110334538chr4:148544985ENST00000296582+01048_6841439TransmembraneHelical
TgeneTMEM184Cchr8:110334538chr4:148544985ENST00000296582+01086_10641439TransmembraneHelical
TgeneTMEM184Cchr8:110334538chr4:148544985ENST00000508208+08179_19941262TransmembraneHelical
TgeneTMEM184Cchr8:110334538chr4:148544985ENST00000508208+08212_23241262TransmembraneHelical
TgeneTMEM184Cchr8:110334538chr4:148544985ENST00000508208+08254_27441262TransmembraneHelical
TgeneTMEM184Cchr8:110334538chr4:148544985ENST00000508208+08287_30741262TransmembraneHelical
TgeneTMEM184Cchr8:110334538chr4:148544985ENST00000508208+0848_6841262TransmembraneHelical
TgeneTMEM184Cchr8:110334538chr4:148544985ENST00000508208+0886_10641262TransmembraneHelical

- In-frame and not-retained protein feature among the 13 regional features.
>>
PartnerGeneHbpTbpENSTStrandBPexonTotalExonProtein feature loci*BPlociTotalLenProtein featureProtein feature note
HgeneNUDCD1chr8:110334538chr4:148544985ENST00000239690-210273_36191584DomainCS
HgeneNUDCD1chr8:110334538chr4:148544985ENST00000427660-210273_36162555DomainCS
TgeneTMEM184Cchr8:110334538chr4:148544985ENST00000296582+01017_3741439TransmembraneHelical
TgeneTMEM184Cchr8:110334538chr4:148544985ENST00000508208+0817_3741262TransmembraneHelical


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FusionGeneSequence for NUDCD1_TMEM184C


check button For in-frame fusion transcripts, we provide the fusion transcript sequences and fusion amino acid sequences.
(nt: nucleotides, aa: amino acids)

* Fusion amino acid sequences.
>In-frame_NUDCD1_ENST00000239690_chr8_110334538_-_TMEM184C_ENST00000296582_chr4_148544985_+_489aa
MEVAANCSLRVKRPLLDPRFEGYKLSLEPLPCYQLELDAAVAEVKLRDDQYTLEHMHAFGMYNYLHCDSWYQDSVYYIDTLGRIMNLTVM
LVGIHTKAWFIAGIFLLLTIPISLWVILQHLVHYTQPELQKPIIRILWMVPIYSLDSWIALKYPGIAIYVDTCRECYEAYVIYNFMGFLT
NYLTNRYPNLVLILEAKDQQKHFPPLCCCPPWAMGEVLLFRCKLGVLQYTVVRPFTTIVALICELLGIYDEGNFSFSNAWTYLVIINNMS
QLFAMYCLLLFYKVLKEELSPIQPVGKFLCVKLVVFVSFWQAVVIALLVKVGVISEKHTWEWQTVEAVATGLQDFIICIEMFLAAIAHHY
TFSYKPYVQEAEEGSCFDSFLAMWDVSDIRDDISEQVRHVGRTVRGHPRKKLFPEDQDQNEHTSLLSSSSQDAISIASSMPPSPMGHYQG

>In-frame_NUDCD1_ENST00000239690_chr8_110334538_-_TMEM184C_ENST00000508208_chr4_148544985_+_312aa
MEVAANCSLRVKRPLLDPRFEGYKLSLEPLPCYQLELDAAVAEVKLRDDQYTLEHMHAFGMYNYLHCDSWYQDSVYYIDTLGRIMNLTVM
LVGIHTKAWFIAGIFLLLTIPISLWVILQHLVHYTQPELQKPIIRILWMVPIYSLDSWIALKYPGIAIYVDTCRECYEAYVIYNFMGFLT
NYLTNRYPNLVLILEAKDQQKHFPPLCCCPPWAMGEVLLFRCKLGVLQYTVVRPFTTIVALICELLGIYDEGNFSFSNAWTYLVIINNMS

>In-frame_NUDCD1_ENST00000427660_chr8_110334538_-_TMEM184C_ENST00000296582_chr4_148544985_+_460aa
MLYLQGWSMPAVAEVKLRDDQYTLEHMHAFGMYNYLHCDSWYQDSVYYIDTLGRIMNLTVMLVGIHTKAWFIAGIFLLLTIPISLWVILQ
HLVHYTQPELQKPIIRILWMVPIYSLDSWIALKYPGIAIYVDTCRECYEAYVIYNFMGFLTNYLTNRYPNLVLILEAKDQQKHFPPLCCC
PPWAMGEVLLFRCKLGVLQYTVVRPFTTIVALICELLGIYDEGNFSFSNAWTYLVIINNMSQLFAMYCLLLFYKVLKEELSPIQPVGKFL
CVKLVVFVSFWQAVVIALLVKVGVISEKHTWEWQTVEAVATGLQDFIICIEMFLAAIAHHYTFSYKPYVQEAEEGSCFDSFLAMWDVSDI
RDDISEQVRHVGRTVRGHPRKKLFPEDQDQNEHTSLLSSSSQDAISIASSMPPSPMGHYQGFGHTVTPQTTPTTAKISDEILSDTIGEKK

>In-frame_NUDCD1_ENST00000427660_chr8_110334538_-_TMEM184C_ENST00000508208_chr4_148544985_+_283aa
MLYLQGWSMPAVAEVKLRDDQYTLEHMHAFGMYNYLHCDSWYQDSVYYIDTLGRIMNLTVMLVGIHTKAWFIAGIFLLLTIPISLWVILQ
HLVHYTQPELQKPIIRILWMVPIYSLDSWIALKYPGIAIYVDTCRECYEAYVIYNFMGFLTNYLTNRYPNLVLILEAKDQQKHFPPLCCC
PPWAMGEVLLFRCKLGVLQYTVVRPFTTIVALICELLGIYDEGNFSFSNAWTYLVIINNMSQLFAMYCLLLFYKVLKEELSPIQPVGKFL


* Fusion transcript sequences (only coding sequence (CDS) region).
>In-frame_NUDCD1_ENST00000239690_chr8_110334538_-_TMEM184C_ENST00000296582_chr4_148544985_+_1467nt
ATGGAGGTGGCGGCTAATTGCTCCCTACGGGTGAAGAGACCTCTGTTGGATCCCCGCTTCGAGGGTTACAAGCTCTCTCTTGAGCCGCTG
CCTTGTTACCAGCTGGAGCTTGACGCAGCTGTGGCAGAGGTAAAACTTCGAGATGATCAATATACACTGGAACACATGCATGCTTTTGGA
ATGTATAATTACCTGCACTGTGATTCATGGTATCAAGACAGTGTCTACTATATTGATACCCTTGGAAGAATTATGAATTTAACAGTAATG
CTGGTTGGAATACACACCAAGGCTTGGTTTATTGCTGGAATCTTTTTGCTGTTGACTATTCCTATATCACTGTGGGTGATATTGCAACAC
TTAGTGCATTATACACAACCTGAACTACAAAAACCAATAATAAGGATTCTTTGGATGGTACCTATTTACAGTTTAGATAGTTGGATAGCT
TTGAAATATCCCGGAATTGCAATATATGTGGATACCTGCAGAGAATGCTATGAAGCTTATGTAATTTACAACTTTATGGGATTCCTTACC
AATTATCTAACTAACCGGTATCCAAATCTGGTATTAATCCTTGAAGCCAAAGATCAACAGAAACATTTCCCTCCTTTATGTTGCTGTCCA
CCATGGGCTATGGGAGAAGTATTGCTGTTTAGGTGCAAACTAGGTGTATTACAGTACACAGTTGTCAGACCTTTCACCACCATCGTTGCT
TTAATCTGTGAGCTGCTTGGTATATATGACGAAGGGAACTTTAGCTTTTCAAATGCTTGGACTTATTTGGTTATAATAAACAACATGTCA
CAGTTGTTTGCCATGTATTGTCTCCTGCTCTTTTATAAAGTACTAAAAGAAGAACTGAGCCCAATCCAACCTGTTGGCAAATTTCTTTGT
GTAAAGCTGGTGGTTTTTGTTTCTTTTTGGCAAGCAGTAGTTATTGCTTTGTTGGTAAAAGTTGGCGTTATTTCTGAAAAGCATACGTGG
GAATGGCAAACTGTAGAAGCTGTGGCCACCGGACTCCAGGATTTTATTATCTGTATTGAGATGTTCCTCGCTGCCATTGCTCATCATTAC
ACATTCTCATATAAACCATATGTCCAAGAAGCAGAAGAGGGCTCATGCTTTGATTCCTTTCTTGCCATGTGGGATGTCTCAGATATTAGA
GATGATATTTCTGAACAAGTAAGGCATGTTGGACGGACAGTCAGGGGACATCCCAGGAAAAAATTGTTTCCCGAGGATCAAGATCAAAAT
GAACATACAAGTTTATTATCATCATCATCACAAGATGCAATTTCCATTGCTTCTTCTATGCCACCTTCACCCATGGGTCACTACCAAGGG
TTTGGACACACTGTGACTCCCCAGACTACACCTACCACAGCTAAGATATCTGATGAAATCCTTAGTGATACTATAGGAGAGAAAAAAGAA

>In-frame_NUDCD1_ENST00000239690_chr8_110334538_-_TMEM184C_ENST00000508208_chr4_148544985_+_936nt
ATGGAGGTGGCGGCTAATTGCTCCCTACGGGTGAAGAGACCTCTGTTGGATCCCCGCTTCGAGGGTTACAAGCTCTCTCTTGAGCCGCTG
CCTTGTTACCAGCTGGAGCTTGACGCAGCTGTGGCAGAGGTAAAACTTCGAGATGATCAATATACACTGGAACACATGCATGCTTTTGGA
ATGTATAATTACCTGCACTGTGATTCATGGTATCAAGACAGTGTCTACTATATTGATACCCTTGGAAGAATTATGAATTTAACAGTAATG
CTGGTTGGAATACACACCAAGGCTTGGTTTATTGCTGGAATCTTTTTGCTGTTGACTATTCCTATATCACTGTGGGTGATATTGCAACAC
TTAGTGCATTATACACAACCTGAACTACAAAAACCAATAATAAGGATTCTTTGGATGGTACCTATTTACAGTTTAGATAGTTGGATAGCT
TTGAAATATCCCGGAATTGCAATATATGTGGATACCTGCAGAGAATGCTATGAAGCTTATGTAATTTACAACTTTATGGGATTCCTTACC
AATTATCTAACTAACCGGTATCCAAATCTGGTATTAATCCTTGAAGCCAAAGATCAACAGAAACATTTCCCTCCTTTATGTTGCTGTCCA
CCATGGGCTATGGGAGAAGTATTGCTGTTTAGGTGCAAACTAGGTGTATTACAGTACACAGTTGTCAGACCTTTCACCACCATCGTTGCT
TTAATCTGTGAGCTGCTTGGTATATATGACGAAGGGAACTTTAGCTTTTCAAATGCTTGGACTTATTTGGTTATAATAAACAACATGTCA
CAGTTGTTTGCCATGTATTGTCTCCTGCTCTTTTATAAAGTACTAAAAGAAGAACTGAGCCCAATCCAACCTGTTGGCAAATTTCTTTGT

>In-frame_NUDCD1_ENST00000427660_chr8_110334538_-_TMEM184C_ENST00000296582_chr4_148544985_+_1380nt
ATGCTTTATCTCCAGGGTTGGAGCATGCCTGCTGTGGCAGAGGTAAAACTTCGAGATGATCAATATACACTGGAACACATGCATGCTTTT
GGAATGTATAATTACCTGCACTGTGATTCATGGTATCAAGACAGTGTCTACTATATTGATACCCTTGGAAGAATTATGAATTTAACAGTA
ATGCTGGTTGGAATACACACCAAGGCTTGGTTTATTGCTGGAATCTTTTTGCTGTTGACTATTCCTATATCACTGTGGGTGATATTGCAA
CACTTAGTGCATTATACACAACCTGAACTACAAAAACCAATAATAAGGATTCTTTGGATGGTACCTATTTACAGTTTAGATAGTTGGATA
GCTTTGAAATATCCCGGAATTGCAATATATGTGGATACCTGCAGAGAATGCTATGAAGCTTATGTAATTTACAACTTTATGGGATTCCTT
ACCAATTATCTAACTAACCGGTATCCAAATCTGGTATTAATCCTTGAAGCCAAAGATCAACAGAAACATTTCCCTCCTTTATGTTGCTGT
CCACCATGGGCTATGGGAGAAGTATTGCTGTTTAGGTGCAAACTAGGTGTATTACAGTACACAGTTGTCAGACCTTTCACCACCATCGTT
GCTTTAATCTGTGAGCTGCTTGGTATATATGACGAAGGGAACTTTAGCTTTTCAAATGCTTGGACTTATTTGGTTATAATAAACAACATG
TCACAGTTGTTTGCCATGTATTGTCTCCTGCTCTTTTATAAAGTACTAAAAGAAGAACTGAGCCCAATCCAACCTGTTGGCAAATTTCTT
TGTGTAAAGCTGGTGGTTTTTGTTTCTTTTTGGCAAGCAGTAGTTATTGCTTTGTTGGTAAAAGTTGGCGTTATTTCTGAAAAGCATACG
TGGGAATGGCAAACTGTAGAAGCTGTGGCCACCGGACTCCAGGATTTTATTATCTGTATTGAGATGTTCCTCGCTGCCATTGCTCATCAT
TACACATTCTCATATAAACCATATGTCCAAGAAGCAGAAGAGGGCTCATGCTTTGATTCCTTTCTTGCCATGTGGGATGTCTCAGATATT
AGAGATGATATTTCTGAACAAGTAAGGCATGTTGGACGGACAGTCAGGGGACATCCCAGGAAAAAATTGTTTCCCGAGGATCAAGATCAA
AATGAACATACAAGTTTATTATCATCATCATCACAAGATGCAATTTCCATTGCTTCTTCTATGCCACCTTCACCCATGGGTCACTACCAA
GGGTTTGGACACACTGTGACTCCCCAGACTACACCTACCACAGCTAAGATATCTGATGAAATCCTTAGTGATACTATAGGAGAGAAAAAA

>In-frame_NUDCD1_ENST00000427660_chr8_110334538_-_TMEM184C_ENST00000508208_chr4_148544985_+_849nt
ATGCTTTATCTCCAGGGTTGGAGCATGCCTGCTGTGGCAGAGGTAAAACTTCGAGATGATCAATATACACTGGAACACATGCATGCTTTT
GGAATGTATAATTACCTGCACTGTGATTCATGGTATCAAGACAGTGTCTACTATATTGATACCCTTGGAAGAATTATGAATTTAACAGTA
ATGCTGGTTGGAATACACACCAAGGCTTGGTTTATTGCTGGAATCTTTTTGCTGTTGACTATTCCTATATCACTGTGGGTGATATTGCAA
CACTTAGTGCATTATACACAACCTGAACTACAAAAACCAATAATAAGGATTCTTTGGATGGTACCTATTTACAGTTTAGATAGTTGGATA
GCTTTGAAATATCCCGGAATTGCAATATATGTGGATACCTGCAGAGAATGCTATGAAGCTTATGTAATTTACAACTTTATGGGATTCCTT
ACCAATTATCTAACTAACCGGTATCCAAATCTGGTATTAATCCTTGAAGCCAAAGATCAACAGAAACATTTCCCTCCTTTATGTTGCTGT
CCACCATGGGCTATGGGAGAAGTATTGCTGTTTAGGTGCAAACTAGGTGTATTACAGTACACAGTTGTCAGACCTTTCACCACCATCGTT
GCTTTAATCTGTGAGCTGCTTGGTATATATGACGAAGGGAACTTTAGCTTTTCAAATGCTTGGACTTATTTGGTTATAATAAACAACATG
TCACAGTTGTTTGCCATGTATTGTCTCCTGCTCTTTTATAAAGTACTAAAAGAAGAACTGAGCCCAATCCAACCTGTTGGCAAATTTCTT


* Fusion transcript sequences (Full-length transcript).
>In-frame_NUDCD1_ENST00000239690_chr8_110334538_-_TMEM184C_ENST00000296582_chr4_148544985_+_4129nt
CGGACTTAGACCCTCAGTAGCTCGGGCACCTAAGCACACAGAAAGCTAGAACACGCATTTCCGGGGCGGGGTCTCGCCACCCTGCCTATA
ATGTGAGAATTTAACCAGCGCGGGCCGCCTCCTGGTTGCTAGGGCCTCTGGGTAACAGAGTTCAGACCTTGCCGTCGCGCGCGCGTTAAG
TACCAGGAGAACTACATAGCCCAGCATGCAACAGTCTCAACTTTTTCACGGACACTACATTTCCCAGAAGGCAGTTCGCACCGCAGTGTT
TTCTGGGATGGGAACCACGCCGCTTCCCAGTCTCTGTGCGAGGCGTGAAGCGCGGACCTTTCAACAAGGGCTTTATTAATTCTCACGCTG
CGGCCCTGGAAAGCGATGGAGGTGGCGGCTAATTGCTCCCTACGGGTGAAGAGACCTCTGTTGGATCCCCGCTTCGAGGGTTACAAGCTC
TCTCTTGAGCCGCTGCCTTGTTACCAGCTGGAGCTTGACGCAGCTGTGGCAGAGGTAAAACTTCGAGATGATCAATATACACTGGAACAC
ATGCATGCTTTTGGAATGTATAATTACCTGCACTGTGATTCATGGTATCAAGACAGTGTCTACTATATTGATACCCTTGGAAGAATTATG
AATTTAACAGTAATGCTGGTTGGAATACACACCAAGGCTTGGTTTATTGCTGGAATCTTTTTGCTGTTGACTATTCCTATATCACTGTGG
GTGATATTGCAACACTTAGTGCATTATACACAACCTGAACTACAAAAACCAATAATAAGGATTCTTTGGATGGTACCTATTTACAGTTTA
GATAGTTGGATAGCTTTGAAATATCCCGGAATTGCAATATATGTGGATACCTGCAGAGAATGCTATGAAGCTTATGTAATTTACAACTTT
ATGGGATTCCTTACCAATTATCTAACTAACCGGTATCCAAATCTGGTATTAATCCTTGAAGCCAAAGATCAACAGAAACATTTCCCTCCT
TTATGTTGCTGTCCACCATGGGCTATGGGAGAAGTATTGCTGTTTAGGTGCAAACTAGGTGTATTACAGTACACAGTTGTCAGACCTTTC
ACCACCATCGTTGCTTTAATCTGTGAGCTGCTTGGTATATATGACGAAGGGAACTTTAGCTTTTCAAATGCTTGGACTTATTTGGTTATA
ATAAACAACATGTCACAGTTGTTTGCCATGTATTGTCTCCTGCTCTTTTATAAAGTACTAAAAGAAGAACTGAGCCCAATCCAACCTGTT
GGCAAATTTCTTTGTGTAAAGCTGGTGGTTTTTGTTTCTTTTTGGCAAGCAGTAGTTATTGCTTTGTTGGTAAAAGTTGGCGTTATTTCT
GAAAAGCATACGTGGGAATGGCAAACTGTAGAAGCTGTGGCCACCGGACTCCAGGATTTTATTATCTGTATTGAGATGTTCCTCGCTGCC
ATTGCTCATCATTACACATTCTCATATAAACCATATGTCCAAGAAGCAGAAGAGGGCTCATGCTTTGATTCCTTTCTTGCCATGTGGGAT
GTCTCAGATATTAGAGATGATATTTCTGAACAAGTAAGGCATGTTGGACGGACAGTCAGGGGACATCCCAGGAAAAAATTGTTTCCCGAG
GATCAAGATCAAAATGAACATACAAGTTTATTATCATCATCATCACAAGATGCAATTTCCATTGCTTCTTCTATGCCACCTTCACCCATG
GGTCACTACCAAGGGTTTGGACACACTGTGACTCCCCAGACTACACCTACCACAGCTAAGATATCTGATGAAATCCTTAGTGATACTATA
GGAGAGAAAAAAGAACCTTCAGATAAATCCGTGGATTCCTGAACAGTATGGAAAAGCAAACTGTGCAACTACTACATTATATCATTACCT
GGTATCCCATGGATTTTGTGCTTGGGACAGACCATAAATGATGGAAAATGTCAACACAAAAATAGCTGAAAGCCAGGTACAACTACTGCA
TTTATATATGTAAGTTTTGTATATCAAAAATAATTGGTCTAAATTTCCTAGACTTAGACTTGATTTCTTAACATTAGGGTATCGCATACT
CAAATGGTAGACAATGACCCCAACTAAATCTTCCTGATGTTACACTGCTTTATCAAGAGGATGGACTTTTTTTTTTTTGAGACAGACAGA
GTCTTGCTCTGTCACCCAGGCTGGAGTGCAGTGGCGCAATCTCGGGTCACTGCAAGCTCTGCCTCCCAAGTTCATGCCATTCTCCTGCCT
CAGCCTCCCAAGTAGCTGGGACTACAGGCACCTGCCACCATGCCCAGCTAATTTTTTTTTTTTCAGTAGAGACAGGGTCTCACCATGTTA
GCCAGGATGGTCTTGATCTGACCTCGTGATCCGCCGACCTCGGCCTCCCAAAGTGCTGGAATTACAGGCGTGAGCCACTGCGCCTGGCCA
AGAATGGACATTTTTTAAAAAAACATCAGTACTTCCTACCACTGCTGCATGAGTATAATGCTCCGGAATTATCAGAAAGCATAATGCAGA
AATACGAATTAGTGGAACTTAATCATGTGCCATATAAGCTTACCTAACAAACAGTTATATCCCTATTCCTCAACTGAATGTCTTTCAATA
AATAAGAATTTATCATTTATTTTCTGCAACTTTTTTATGTCTCATTCTTTAAACATTAAAAACCCTTAATATTTTAACAAAAATTTCTTG
ATTAGAGGCACAGTGAAAAAGAAGTCAAAAAAAAAAGTTCTACTTTTCATCAGTGCTATTAAAGGTGGCAGCAAATGTAAATCTTGGCTG
AATGGTCTTAATTACTCATTAAACCACAGTCAGAAAGACATATAGGTGCTATTTGGGAAAACTTTTTATTACCTAGGATGGGGTTTCTCT
AATTGCTAATCACAACCCCACTGGGTCATGTTTGACATTTTATAATGAAAATAAAACAGAAAGTGCCATAGTATGTTACAGAAAGCAAAG
ATGAGTATTGTTTCTCAAAGCCTTTGCTTTATGTATTTATACACATACTCATTCATATCTATCTATATATATAGAGAGAGATAGTGGTTC
ACAGTAATCATACAAAGTCTTTATTCCATCCACTATTATAAACATTTCTATTAAAACTAAAACTGGGCTCTATGTAAAAACCCCAAAGAT
ACACACACAAAAAAAATCTGTTTGTTAGAACTCAAGTGAATTCAGTAAAGTTGCAGAATACAAAATCAACATACAAAAAGCATTAGCATT
TTTATACATAAATAATGAAAATAATGACCTAACTGAAAAATTAAGATGCCATTTATGATAGCATAAAAAAAATACTTACTTAGGAATAAA
TTTAACACCAAGGCAGTAAAAGATCTGTATGTACACTGAAAACTATGAAACACTGATGAAAGAAAGACACAAATAAATGGAAAGGTATCC
CGTGCTCATGGATCAGAATAATACTGTTAAAATGGTCACACTACCCAAAGCAATTCAGAATCAATGCAATCCTATCAAAATTCCAATGGC
ATTATTTACACAAACAGAAAAAAATCCTAAAATTCATATGTAACGATAAAAGACCCTGAATAGGCAAAAGAATACTGAGGAAAAAATGTT
GGAGACATCACATTTCCTAATTATAAATTATACTACAAAACTATAGTAATCAAGACAGTATGGTACTGGTATAAAAACACATACACAGGC
CAGTGGGACAGAAGAAAGAGTCCAGATATAAATCCAAACATACACAGTCAACTAATTTTTGACAAAGACACCAAGAAGACACATCGGGGA
AAGAACAGTCTTCATTAAGTGTTCTTAATGAAGATGCTGGGAAAACTGCACTTCCACATGCAAAACAATGAAATCAGACCCTTATCTTAG
ACCTACACAACAATCAATTCAAAATGGATAAAAGACCTAAATGTAAGACCAGAAACTATAGAAGAGAACATAGGAGAAAAGTTCCTGGAC
ACTGACCCTTGGCAATGATTTTTTGGATATCACACCAAAAGCTCAGTCAACAAAAACAAAAACAAATGTGACTACATCAAACCAAAAAGC

>In-frame_NUDCD1_ENST00000239690_chr8_110334538_-_TMEM184C_ENST00000508208_chr4_148544985_+_1482nt
CGGACTTAGACCCTCAGTAGCTCGGGCACCTAAGCACACAGAAAGCTAGAACACGCATTTCCGGGGCGGGGTCTCGCCACCCTGCCTATA
ATGTGAGAATTTAACCAGCGCGGGCCGCCTCCTGGTTGCTAGGGCCTCTGGGTAACAGAGTTCAGACCTTGCCGTCGCGCGCGCGTTAAG
TACCAGGAGAACTACATAGCCCAGCATGCAACAGTCTCAACTTTTTCACGGACACTACATTTCCCAGAAGGCAGTTCGCACCGCAGTGTT
TTCTGGGATGGGAACCACGCCGCTTCCCAGTCTCTGTGCGAGGCGTGAAGCGCGGACCTTTCAACAAGGGCTTTATTAATTCTCACGCTG
CGGCCCTGGAAAGCGATGGAGGTGGCGGCTAATTGCTCCCTACGGGTGAAGAGACCTCTGTTGGATCCCCGCTTCGAGGGTTACAAGCTC
TCTCTTGAGCCGCTGCCTTGTTACCAGCTGGAGCTTGACGCAGCTGTGGCAGAGGTAAAACTTCGAGATGATCAATATACACTGGAACAC
ATGCATGCTTTTGGAATGTATAATTACCTGCACTGTGATTCATGGTATCAAGACAGTGTCTACTATATTGATACCCTTGGAAGAATTATG
AATTTAACAGTAATGCTGGTTGGAATACACACCAAGGCTTGGTTTATTGCTGGAATCTTTTTGCTGTTGACTATTCCTATATCACTGTGG
GTGATATTGCAACACTTAGTGCATTATACACAACCTGAACTACAAAAACCAATAATAAGGATTCTTTGGATGGTACCTATTTACAGTTTA
GATAGTTGGATAGCTTTGAAATATCCCGGAATTGCAATATATGTGGATACCTGCAGAGAATGCTATGAAGCTTATGTAATTTACAACTTT
ATGGGATTCCTTACCAATTATCTAACTAACCGGTATCCAAATCTGGTATTAATCCTTGAAGCCAAAGATCAACAGAAACATTTCCCTCCT
TTATGTTGCTGTCCACCATGGGCTATGGGAGAAGTATTGCTGTTTAGGTGCAAACTAGGTGTATTACAGTACACAGTTGTCAGACCTTTC
ACCACCATCGTTGCTTTAATCTGTGAGCTGCTTGGTATATATGACGAAGGGAACTTTAGCTTTTCAAATGCTTGGACTTATTTGGTTATA
ATAAACAACATGTCACAGTTGTTTGCCATGTATTGTCTCCTGCTCTTTTATAAAGTACTAAAAGAAGAACTGAGCCCAATCCAACCTGTT
GGCAAATTTCTTTGTGTAAAGCTGGTGGTTTTTGTTTCTTTTTGGCCTTAACCCCGAAACTGACTATACTGGAGAAGGAAAGGCCGTGTA
AAGACACAACAAGAAAGCAGAATCTGCAATCCAGGAAGAGAATCCTCACAAGAAACCAAACTTGCCAACACCTTGATCATGGTCTTCCAG

>In-frame_NUDCD1_ENST00000427660_chr8_110334538_-_TMEM184C_ENST00000296582_chr4_148544985_+_3766nt
AGTACTTCATAGACTTTATCATACTTCGTAGCATCCAGTATGTTTTCTTTGCTAAGATTATTGATTTTGTATTGAAGGGTCCCATGTCCA
TCGTTTTCAATGCTTTATCTCCAGGGTTGGAGCATGCCTGCTGTGGCAGAGGTAAAACTTCGAGATGATCAATATACACTGGAACACATG
CATGCTTTTGGAATGTATAATTACCTGCACTGTGATTCATGGTATCAAGACAGTGTCTACTATATTGATACCCTTGGAAGAATTATGAAT
TTAACAGTAATGCTGGTTGGAATACACACCAAGGCTTGGTTTATTGCTGGAATCTTTTTGCTGTTGACTATTCCTATATCACTGTGGGTG
ATATTGCAACACTTAGTGCATTATACACAACCTGAACTACAAAAACCAATAATAAGGATTCTTTGGATGGTACCTATTTACAGTTTAGAT
AGTTGGATAGCTTTGAAATATCCCGGAATTGCAATATATGTGGATACCTGCAGAGAATGCTATGAAGCTTATGTAATTTACAACTTTATG
GGATTCCTTACCAATTATCTAACTAACCGGTATCCAAATCTGGTATTAATCCTTGAAGCCAAAGATCAACAGAAACATTTCCCTCCTTTA
TGTTGCTGTCCACCATGGGCTATGGGAGAAGTATTGCTGTTTAGGTGCAAACTAGGTGTATTACAGTACACAGTTGTCAGACCTTTCACC
ACCATCGTTGCTTTAATCTGTGAGCTGCTTGGTATATATGACGAAGGGAACTTTAGCTTTTCAAATGCTTGGACTTATTTGGTTATAATA
AACAACATGTCACAGTTGTTTGCCATGTATTGTCTCCTGCTCTTTTATAAAGTACTAAAAGAAGAACTGAGCCCAATCCAACCTGTTGGC
AAATTTCTTTGTGTAAAGCTGGTGGTTTTTGTTTCTTTTTGGCAAGCAGTAGTTATTGCTTTGTTGGTAAAAGTTGGCGTTATTTCTGAA
AAGCATACGTGGGAATGGCAAACTGTAGAAGCTGTGGCCACCGGACTCCAGGATTTTATTATCTGTATTGAGATGTTCCTCGCTGCCATT
GCTCATCATTACACATTCTCATATAAACCATATGTCCAAGAAGCAGAAGAGGGCTCATGCTTTGATTCCTTTCTTGCCATGTGGGATGTC
TCAGATATTAGAGATGATATTTCTGAACAAGTAAGGCATGTTGGACGGACAGTCAGGGGACATCCCAGGAAAAAATTGTTTCCCGAGGAT
CAAGATCAAAATGAACATACAAGTTTATTATCATCATCATCACAAGATGCAATTTCCATTGCTTCTTCTATGCCACCTTCACCCATGGGT
CACTACCAAGGGTTTGGACACACTGTGACTCCCCAGACTACACCTACCACAGCTAAGATATCTGATGAAATCCTTAGTGATACTATAGGA
GAGAAAAAAGAACCTTCAGATAAATCCGTGGATTCCTGAACAGTATGGAAAAGCAAACTGTGCAACTACTACATTATATCATTACCTGGT
ATCCCATGGATTTTGTGCTTGGGACAGACCATAAATGATGGAAAATGTCAACACAAAAATAGCTGAAAGCCAGGTACAACTACTGCATTT
ATATATGTAAGTTTTGTATATCAAAAATAATTGGTCTAAATTTCCTAGACTTAGACTTGATTTCTTAACATTAGGGTATCGCATACTCAA
ATGGTAGACAATGACCCCAACTAAATCTTCCTGATGTTACACTGCTTTATCAAGAGGATGGACTTTTTTTTTTTTGAGACAGACAGAGTC
TTGCTCTGTCACCCAGGCTGGAGTGCAGTGGCGCAATCTCGGGTCACTGCAAGCTCTGCCTCCCAAGTTCATGCCATTCTCCTGCCTCAG
CCTCCCAAGTAGCTGGGACTACAGGCACCTGCCACCATGCCCAGCTAATTTTTTTTTTTTCAGTAGAGACAGGGTCTCACCATGTTAGCC
AGGATGGTCTTGATCTGACCTCGTGATCCGCCGACCTCGGCCTCCCAAAGTGCTGGAATTACAGGCGTGAGCCACTGCGCCTGGCCAAGA
ATGGACATTTTTTAAAAAAACATCAGTACTTCCTACCACTGCTGCATGAGTATAATGCTCCGGAATTATCAGAAAGCATAATGCAGAAAT
ACGAATTAGTGGAACTTAATCATGTGCCATATAAGCTTACCTAACAAACAGTTATATCCCTATTCCTCAACTGAATGTCTTTCAATAAAT
AAGAATTTATCATTTATTTTCTGCAACTTTTTTATGTCTCATTCTTTAAACATTAAAAACCCTTAATATTTTAACAAAAATTTCTTGATT
AGAGGCACAGTGAAAAAGAAGTCAAAAAAAAAAGTTCTACTTTTCATCAGTGCTATTAAAGGTGGCAGCAAATGTAAATCTTGGCTGAAT
GGTCTTAATTACTCATTAAACCACAGTCAGAAAGACATATAGGTGCTATTTGGGAAAACTTTTTATTACCTAGGATGGGGTTTCTCTAAT
TGCTAATCACAACCCCACTGGGTCATGTTTGACATTTTATAATGAAAATAAAACAGAAAGTGCCATAGTATGTTACAGAAAGCAAAGATG
AGTATTGTTTCTCAAAGCCTTTGCTTTATGTATTTATACACATACTCATTCATATCTATCTATATATATAGAGAGAGATAGTGGTTCACA
GTAATCATACAAAGTCTTTATTCCATCCACTATTATAAACATTTCTATTAAAACTAAAACTGGGCTCTATGTAAAAACCCCAAAGATACA
CACACAAAAAAAATCTGTTTGTTAGAACTCAAGTGAATTCAGTAAAGTTGCAGAATACAAAATCAACATACAAAAAGCATTAGCATTTTT
ATACATAAATAATGAAAATAATGACCTAACTGAAAAATTAAGATGCCATTTATGATAGCATAAAAAAAATACTTACTTAGGAATAAATTT
AACACCAAGGCAGTAAAAGATCTGTATGTACACTGAAAACTATGAAACACTGATGAAAGAAAGACACAAATAAATGGAAAGGTATCCCGT
GCTCATGGATCAGAATAATACTGTTAAAATGGTCACACTACCCAAAGCAATTCAGAATCAATGCAATCCTATCAAAATTCCAATGGCATT
ATTTACACAAACAGAAAAAAATCCTAAAATTCATATGTAACGATAAAAGACCCTGAATAGGCAAAAGAATACTGAGGAAAAAATGTTGGA
GACATCACATTTCCTAATTATAAATTATACTACAAAACTATAGTAATCAAGACAGTATGGTACTGGTATAAAAACACATACACAGGCCAG
TGGGACAGAAGAAAGAGTCCAGATATAAATCCAAACATACACAGTCAACTAATTTTTGACAAAGACACCAAGAAGACACATCGGGGAAAG
AACAGTCTTCATTAAGTGTTCTTAATGAAGATGCTGGGAAAACTGCACTTCCACATGCAAAACAATGAAATCAGACCCTTATCTTAGACC
TACACAACAATCAATTCAAAATGGATAAAAGACCTAAATGTAAGACCAGAAACTATAGAAGAGAACATAGGAGAAAAGTTCCTGGACACT
GACCCTTGGCAATGATTTTTTGGATATCACACCAAAAGCTCAGTCAACAAAAACAAAAACAAATGTGACTACATCAAACCAAAAAGCTTC

>In-frame_NUDCD1_ENST00000427660_chr8_110334538_-_TMEM184C_ENST00000508208_chr4_148544985_+_1119nt
AGTACTTCATAGACTTTATCATACTTCGTAGCATCCAGTATGTTTTCTTTGCTAAGATTATTGATTTTGTATTGAAGGGTCCCATGTCCA
TCGTTTTCAATGCTTTATCTCCAGGGTTGGAGCATGCCTGCTGTGGCAGAGGTAAAACTTCGAGATGATCAATATACACTGGAACACATG
CATGCTTTTGGAATGTATAATTACCTGCACTGTGATTCATGGTATCAAGACAGTGTCTACTATATTGATACCCTTGGAAGAATTATGAAT
TTAACAGTAATGCTGGTTGGAATACACACCAAGGCTTGGTTTATTGCTGGAATCTTTTTGCTGTTGACTATTCCTATATCACTGTGGGTG
ATATTGCAACACTTAGTGCATTATACACAACCTGAACTACAAAAACCAATAATAAGGATTCTTTGGATGGTACCTATTTACAGTTTAGAT
AGTTGGATAGCTTTGAAATATCCCGGAATTGCAATATATGTGGATACCTGCAGAGAATGCTATGAAGCTTATGTAATTTACAACTTTATG
GGATTCCTTACCAATTATCTAACTAACCGGTATCCAAATCTGGTATTAATCCTTGAAGCCAAAGATCAACAGAAACATTTCCCTCCTTTA
TGTTGCTGTCCACCATGGGCTATGGGAGAAGTATTGCTGTTTAGGTGCAAACTAGGTGTATTACAGTACACAGTTGTCAGACCTTTCACC
ACCATCGTTGCTTTAATCTGTGAGCTGCTTGGTATATATGACGAAGGGAACTTTAGCTTTTCAAATGCTTGGACTTATTTGGTTATAATA
AACAACATGTCACAGTTGTTTGCCATGTATTGTCTCCTGCTCTTTTATAAAGTACTAAAAGAAGAACTGAGCCCAATCCAACCTGTTGGC
AAATTTCTTTGTGTAAAGCTGGTGGTTTTTGTTTCTTTTTGGCCTTAACCCCGAAACTGACTATACTGGAGAAGGAAAGGCCGTGTAAAG
ACACAACAAGAAAGCAGAATCTGCAATCCAGGAAGAGAATCCTCACAAGAAACCAAACTTGCCAACACCTTGATCATGGTCTTCCAGCCT


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FusionGenePPI for NUDCD1_TMEM184C


check button Go to ChiPPI (Chimeric Protein-Protein interactions) to see the chimeric PPI interaction in

ChiPPI page

.

check button Protein-protein interactors with each fusion partner protein in wild-type (BIOGRID-3.4.160)
HgeneHgene's interactorsTgeneTgene's interactors
NUDCD1USP36, NPM1, HECW2, ERP44, PDCD10, PLD3, TYMP, UBA5, DHX8, DHX38, DHX16, COPB1, COPG2, DHX40, ARCN1, DHX33, COPZ1, GBA, COPE, FUOM, COPA, COPB2, COPG1, DHX15, DNHD1, VWA8, SLC34A2, ERBB4, F12, LIPH, NTRK1, DHX32, ABCF2, FAM19A3, CCND2TMEM184CSGK1, TCTN3


check button - Retained PPIs in in-frame fusion.
PartnerGeneHbpTbpENSTStrandBPexonTotalExonProtein feature loci*BPlociTotalLenStill interaction with


check button - Lost PPIs in in-frame fusion.
PartnerGeneHbpTbpENSTStrandBPexonTotalExonProtein feature loci*BPlociTotalLenInteraction lost with


check button - Retained PPIs, but lost function due to frame-shift fusion.
PartnerGeneHbpTbpENSTStrandBPexonTotalExonProtein feature loci*BPlociTotalLenInteraction lost with


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RelatedDrugs for NUDCD1_TMEM184C


check button Drugs targeting genes involved in this fusion gene.
(DrugBank Version 5.1.0 2018-04-02)
PartnerGeneUniProtAccDrugBank IDDrug nameDrug activityDrug typeDrug status

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RelatedDiseases for NUDCD1_TMEM184C


check button Diseases associated with fusion partners.
(DisGeNet 4.0)
PartnerGeneDisease IDDisease name# pubmedsSource