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Fusion gene ID: 24295 |
FusionGeneSummary for NFX1_DNAJA1 |
 Fusion gene summary |
| Fusion gene information | Fusion gene name: NFX1_DNAJA1 | Fusion gene ID: 24295 | Hgene | Tgene | Gene symbol | NFX1 | DNAJA1 | Gene ID | 4799 | 3301 |
| Gene name | nuclear transcription factor, X-box binding 1 | DnaJ heat shock protein family (Hsp40) member A1 | |
| Synonyms | NFX2|TEG-42|Tex42 | DJ-2|DjA1|HDJ2|HSDJ|HSJ-2|HSJ2|HSPF4|NEDD7|hDJ-2 | |
| Cytomap | 9p13.3 | 9p21.1 | |
| Type of gene | protein-coding | protein-coding | |
| Description | transcriptional repressor NF-X1nuclear transcription factor, X box-binding protein 1 | dnaJ homolog subfamily A member 1DnaJ (Hsp40) homolog, subfamily A, member 1dnaJ protein homolog 2heat shock 40 kDa protein 4heat shock protein J2heat shock protein, DNAJ-like 2human DnaJ protein 2neural precursor cell expressed, developmentally do | |
| Modification date | 20180523 | 20180523 | |
| UniProtAcc | Q12986 | P31689 | |
| Ensembl transtripts involved in fusion gene | ENST00000379540, ENST00000379521, ENST00000318524, ENST00000463421, | ENST00000330899, ENST00000544625, ENST00000495015, | |
| Fusion gene scores | * DoF score | 13 X 11 X 8=1144 | 1 X 2 X 2=4 |
| # samples | 15 | 2 | |
| ** MAII score | log2(15/1144*10)=-2.93105264628251 possibly effective Gene in Pan-Cancer Fusion Genes (peGinPCFGs). DoF>8 and MAII<0 | log2(2/4*10)=2.32192809488736 | |
| Context | PubMed: NFX1 [Title/Abstract] AND DNAJA1 [Title/Abstract] AND fusion [Title/Abstract] | ||
| Functional or gene categories assigned by FusionGDB annotation | |||
| * DoF score (Degree of Frequency) = # partners X # break points X # cancer types ** MAII score (Major Active Isofusion Index) = log2(# samples/DoF score*10) |
| Gene ontology of each fusion partner gene with evidence of Inferred from Direct Assay (IDA) from Entrez |
| Partner | Gene | GO ID | GO term | PubMed ID |
| Hgene | NFX1 | GO:0000122 | negative regulation of transcription by RNA polymerase II | 7964459 |
| Tgene | DNAJA1 | GO:0031397 | negative regulation of protein ubiquitination | 12150907 |
| Tgene | DNAJA1 | GO:0051223 | regulation of protein transport | 14752510 |
| Tgene | DNAJA1 | GO:1903748 | negative regulation of establishment of protein localization to mitochondrion | 14752510 |
| Tgene | DNAJA1 | GO:1905259 | negative regulation of nitrosative stress-induced intrinsic apoptotic signaling pathway | 14752510 |
| Fusion gene information from three resources (ChiTars (NAR, 2018), tumorfusions (NAR, 2018), Gao et al. (Cell, 2018)) * All genome coordinats were lifted-over on hg19. * Click on the break point to see the gene structure around the break point region using the UCSC Genome Browser. |
| Data type | Source | Cancer type | Sample | Hgene | Hchr | Hbp | Hstrand | Tgene | Tchr | Tbp | Tstrand |
| TCGA | LD | BRCA | TCGA-A7-A0CG-01A | NFX1 | chr9 | 33319125 | + | DNAJA1 | chr9 | 33038683 | + |
| TCGA | RV | UCS | TCGA-N8-A56S-01A | NFX1 | chr9 | 33290595 | + | DNAJA1 | chr9 | 33029883 | + |
| * LD: Li Ding group's fusion gene list RV: Roel Verhaak group's fusion gene list ChiTaRs fusion database |
| Open reading frame (ORF) analsis of fusion genes based on Ensembl gene isoform structure. * Click on the break point to see the gene structure around the break point region using the UCSC Genome Browser. |
| ORF | Henst | Tenst | Hgene | Hchr | Hbp | Hstrand | Tgene | Tchr | Tbp | Tstrand |
| In-frame | ENST00000379540 | ENST00000330899 | NFX1 | chr9 | 33319125 | + | DNAJA1 | chr9 | 33038683 | + |
| Frame-shift | ENST00000379540 | ENST00000544625 | NFX1 | chr9 | 33319125 | + | DNAJA1 | chr9 | 33038683 | + |
| 5CDS-3UTR | ENST00000379540 | ENST00000495015 | NFX1 | chr9 | 33319125 | + | DNAJA1 | chr9 | 33038683 | + |
| In-frame | ENST00000379521 | ENST00000330899 | NFX1 | chr9 | 33319125 | + | DNAJA1 | chr9 | 33038683 | + |
| Frame-shift | ENST00000379521 | ENST00000544625 | NFX1 | chr9 | 33319125 | + | DNAJA1 | chr9 | 33038683 | + |
| 5CDS-3UTR | ENST00000379521 | ENST00000495015 | NFX1 | chr9 | 33319125 | + | DNAJA1 | chr9 | 33038683 | + |
| In-frame | ENST00000318524 | ENST00000330899 | NFX1 | chr9 | 33319125 | + | DNAJA1 | chr9 | 33038683 | + |
| Frame-shift | ENST00000318524 | ENST00000544625 | NFX1 | chr9 | 33319125 | + | DNAJA1 | chr9 | 33038683 | + |
| 5CDS-3UTR | ENST00000318524 | ENST00000495015 | NFX1 | chr9 | 33319125 | + | DNAJA1 | chr9 | 33038683 | + |
| intron-3CDS | ENST00000463421 | ENST00000330899 | NFX1 | chr9 | 33319125 | + | DNAJA1 | chr9 | 33038683 | + |
| intron-3CDS | ENST00000463421 | ENST00000544625 | NFX1 | chr9 | 33319125 | + | DNAJA1 | chr9 | 33038683 | + |
| intron-3UTR | ENST00000463421 | ENST00000495015 | NFX1 | chr9 | 33319125 | + | DNAJA1 | chr9 | 33038683 | + |
| In-frame | ENST00000379540 | ENST00000330899 | NFX1 | chr9 | 33290595 | + | DNAJA1 | chr9 | 33029883 | + |
| 5CDS-5UTR | ENST00000379540 | ENST00000544625 | NFX1 | chr9 | 33290595 | + | DNAJA1 | chr9 | 33029883 | + |
| 5CDS-intron | ENST00000379540 | ENST00000495015 | NFX1 | chr9 | 33290595 | + | DNAJA1 | chr9 | 33029883 | + |
| In-frame | ENST00000379521 | ENST00000330899 | NFX1 | chr9 | 33290595 | + | DNAJA1 | chr9 | 33029883 | + |
| 5CDS-5UTR | ENST00000379521 | ENST00000544625 | NFX1 | chr9 | 33290595 | + | DNAJA1 | chr9 | 33029883 | + |
| 5CDS-intron | ENST00000379521 | ENST00000495015 | NFX1 | chr9 | 33290595 | + | DNAJA1 | chr9 | 33029883 | + |
| In-frame | ENST00000318524 | ENST00000330899 | NFX1 | chr9 | 33290595 | + | DNAJA1 | chr9 | 33029883 | + |
| 5CDS-5UTR | ENST00000318524 | ENST00000544625 | NFX1 | chr9 | 33290595 | + | DNAJA1 | chr9 | 33029883 | + |
| 5CDS-intron | ENST00000318524 | ENST00000495015 | NFX1 | chr9 | 33290595 | + | DNAJA1 | chr9 | 33029883 | + |
| intron-3CDS | ENST00000463421 | ENST00000330899 | NFX1 | chr9 | 33290595 | + | DNAJA1 | chr9 | 33029883 | + |
| intron-5UTR | ENST00000463421 | ENST00000544625 | NFX1 | chr9 | 33290595 | + | DNAJA1 | chr9 | 33029883 | + |
| intron-intron | ENST00000463421 | ENST00000495015 | NFX1 | chr9 | 33290595 | + | DNAJA1 | chr9 | 33029883 | + |
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FusionProtFeatures for NFX1_DNAJA1 |
| Main function of each fusion partner protein. (from UniProt) |
| Hgene | Tgene |
| NFX1 | DNAJA1 |
| Binds to the X-box motif of MHC class II genes andrepresses their expression. May play an important role inregulating the duration of an inflammatory response by limitingthe period in which MHC class II molecules are induced byinterferon-gamma. Isoform 3 binds to the X-box motif of TERTpromoter and represses its expression. Together with PABPC1 orPABPC4, isoform 1 acts as a coactivator for TERT expression.Mediates E2-dependent ubiquitination.{ECO:0000269|PubMed:10500182, ECO:0000269|PubMed:15371341,ECO:0000269|PubMed:17267499}. | Co-chaperone for HSPA8/Hsc70 (PubMed:10816573).Stimulates ATP hydrolysis, but not the folding of unfoldedproteins mediated by HSPA1A (in vitro) (PubMed:24318877). Plays arole in protein transport into mitochondria via its role as co-chaperone. Functions as co-chaperone for HSPA1B and negativelyregulates the translocation of BAX from the cytosol tomitochondria in response to cellular stress, thereby protectingcells against apoptosis (PubMed:14752510). Promotes apoptosis inresponse to cellular stress mediated by exposure to anisomycin orUV (PubMed:24512202). {ECO:0000269|PubMed:10816573,ECO:0000269|PubMed:14752510, ECO:0000269|PubMed:24318877,ECO:0000269|PubMed:24512202, ECO:0000269|PubMed:9192730}. |
| Retention analysis result of each fusion partner protein across 39 protein features of UniProt such as six molecule processing features, 13 region features, four site features, six amino acid modification features, two natural variation features, five experimental info features, and 3 secondary structure features. Here, because of limited space for viewing, we only show the protein feature retention information belong to the 13 regional features. All retention annotation result can be downloaded at . * Minus value of BPloci means that the break pointn is located before the CDS. |
| - In-frame and retained protein feature among the 13 regional features. |
| Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Protein feature | Protein feature note |
| Hgene | NFX1 | chr9:33319125 | chr9:33038683 | ENST00000318524 | + | 9 | 16 | 358_409 | 635 | 834 | Zinc finger | RING-type%3B atypical |
| Hgene | NFX1 | chr9:33319125 | chr9:33038683 | ENST00000318524 | + | 9 | 16 | 453_471 | 635 | 834 | Zinc finger | Note=NF-X1-type 1 |
| Hgene | NFX1 | chr9:33319125 | chr9:33038683 | ENST00000318524 | + | 9 | 16 | 506_525 | 635 | 834 | Zinc finger | Note=NF-X1-type 2 |
| Hgene | NFX1 | chr9:33319125 | chr9:33038683 | ENST00000318524 | + | 9 | 16 | 567_586 | 635 | 834 | Zinc finger | Note=NF-X1-type 3 |
| Hgene | NFX1 | chr9:33319125 | chr9:33038683 | ENST00000379521 | + | 9 | 21 | 358_409 | 635 | 1025 | Zinc finger | RING-type%3B atypical |
| Hgene | NFX1 | chr9:33319125 | chr9:33038683 | ENST00000379521 | + | 9 | 21 | 453_471 | 635 | 1025 | Zinc finger | Note=NF-X1-type 1 |
| Hgene | NFX1 | chr9:33319125 | chr9:33038683 | ENST00000379521 | + | 9 | 21 | 506_525 | 635 | 1025 | Zinc finger | Note=NF-X1-type 2 |
| Hgene | NFX1 | chr9:33319125 | chr9:33038683 | ENST00000379521 | + | 9 | 21 | 567_586 | 635 | 1025 | Zinc finger | Note=NF-X1-type 3 |
| Hgene | NFX1 | chr9:33319125 | chr9:33038683 | ENST00000379540 | + | 9 | 24 | 358_409 | 635 | 1121 | Zinc finger | RING-type%3B atypical |
| Hgene | NFX1 | chr9:33319125 | chr9:33038683 | ENST00000379540 | + | 9 | 24 | 453_471 | 635 | 1121 | Zinc finger | Note=NF-X1-type 1 |
| Hgene | NFX1 | chr9:33319125 | chr9:33038683 | ENST00000379540 | + | 9 | 24 | 506_525 | 635 | 1121 | Zinc finger | Note=NF-X1-type 2 |
| Hgene | NFX1 | chr9:33319125 | chr9:33038683 | ENST00000379540 | + | 9 | 24 | 567_586 | 635 | 1121 | Zinc finger | Note=NF-X1-type 3 |
| Tgene | >DNAJA1 | chr9:33290595 | chr9:33029883 | ENST00000330899 | + | 2 | 9 | 134_141 | 103 | 398 | Repeat | Note=CXXCXGXG motif |
| Tgene | >DNAJA1 | chr9:33290595 | chr9:33029883 | ENST00000330899 | + | 2 | 9 | 150_157 | 103 | 398 | Repeat | Note=CXXCXGXG motif |
| Tgene | >DNAJA1 | chr9:33290595 | chr9:33029883 | ENST00000330899 | + | 2 | 9 | 177_184 | 103 | 398 | Repeat | Note=CXXCXGXG motif |
| Tgene | >DNAJA1 | chr9:33290595 | chr9:33029883 | ENST00000330899 | + | 2 | 9 | 193_200 | 103 | 398 | Repeat | Note=CXXCXGXG motif |
| Tgene | >DNAJA1 | chr9:33290595 | chr9:33029883 | ENST00000330899 | + | 2 | 9 | 121_205 | 103 | 398 | Zinc finger | Note=CR-type |
| - In-frame and not-retained protein feature among the 13 regional features. |
| Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Protein feature | Protein feature note |
| Hgene | >NFX1 | chr9:33290595 | chr9:33029883 | ENST00000318524 | + | 1 | 16 | 1084_1089 | 8 | 834 | Compositional bias | Note=Poly-Pro |
| Hgene | >NFX1 | chr9:33290595 | chr9:33029883 | ENST00000379521 | + | 1 | 21 | 1084_1089 | 8 | 1025 | Compositional bias | Note=Poly-Pro |
| Hgene | >NFX1 | chr9:33290595 | chr9:33029883 | ENST00000379540 | + | 1 | 24 | 1084_1089 | 8 | 1121 | Compositional bias | Note=Poly-Pro |
| Hgene | >NFX1 | chr9:33319125 | chr9:33038683 | ENST00000318524 | + | 9 | 16 | 1084_1089 | 635 | 834 | Compositional bias | Note=Poly-Pro |
| Hgene | >NFX1 | chr9:33319125 | chr9:33038683 | ENST00000379521 | + | 9 | 21 | 1084_1089 | 635 | 1025 | Compositional bias | Note=Poly-Pro |
| Hgene | >NFX1 | chr9:33319125 | chr9:33038683 | ENST00000379540 | + | 9 | 24 | 1084_1089 | 635 | 1121 | Compositional bias | Note=Poly-Pro |
| Hgene | >NFX1 | chr9:33290595 | chr9:33029883 | ENST00000318524 | + | 1 | 16 | 994_1062 | 8 | 834 | Domain | R3H |
| Hgene | >NFX1 | chr9:33290595 | chr9:33029883 | ENST00000379521 | + | 1 | 21 | 994_1062 | 8 | 1025 | Domain | R3H |
| Hgene | >NFX1 | chr9:33290595 | chr9:33029883 | ENST00000379540 | + | 1 | 24 | 994_1062 | 8 | 1121 | Domain | R3H |
| Hgene | >NFX1 | chr9:33319125 | chr9:33038683 | ENST00000318524 | + | 9 | 16 | 994_1062 | 635 | 834 | Domain | R3H |
| Hgene | >NFX1 | chr9:33319125 | chr9:33038683 | ENST00000379521 | + | 9 | 21 | 994_1062 | 635 | 1025 | Domain | R3H |
| Hgene | >NFX1 | chr9:33319125 | chr9:33038683 | ENST00000379540 | + | 9 | 24 | 994_1062 | 635 | 1121 | Domain | R3H |
| Hgene | >NFX1 | chr9:33290595 | chr9:33029883 | ENST00000318524 | + | 1 | 16 | 358_409 | 8 | 834 | Zinc finger | RING-type%3B atypical |
| Hgene | >NFX1 | chr9:33290595 | chr9:33029883 | ENST00000318524 | + | 1 | 16 | 453_471 | 8 | 834 | Zinc finger | Note=NF-X1-type 1 |
| Hgene | >NFX1 | chr9:33290595 | chr9:33029883 | ENST00000318524 | + | 1 | 16 | 506_525 | 8 | 834 | Zinc finger | Note=NF-X1-type 2 |
| Hgene | >NFX1 | chr9:33290595 | chr9:33029883 | ENST00000318524 | + | 1 | 16 | 567_586 | 8 | 834 | Zinc finger | Note=NF-X1-type 3 |
| Hgene | >NFX1 | chr9:33290595 | chr9:33029883 | ENST00000318524 | + | 1 | 16 | 632_655 | 8 | 834 | Zinc finger | Note=NF-X1-type 4 |
| Hgene | >NFX1 | chr9:33290595 | chr9:33029883 | ENST00000318524 | + | 1 | 16 | 694_713 | 8 | 834 | Zinc finger | Note=NF-X1-type 5 |
| Hgene | >NFX1 | chr9:33290595 | chr9:33029883 | ENST00000318524 | + | 1 | 16 | 721_740 | 8 | 834 | Zinc finger | Note=NF-X1-type 6 |
| Hgene | >NFX1 | chr9:33290595 | chr9:33029883 | ENST00000318524 | + | 1 | 16 | 832_854 | 8 | 834 | Zinc finger | Note=NF-X1-type 7 |
| Hgene | >NFX1 | chr9:33290595 | chr9:33029883 | ENST00000318524 | + | 1 | 16 | 863_884 | 8 | 834 | Zinc finger | Note=NF-X1-type 8 |
| Hgene | >NFX1 | chr9:33290595 | chr9:33029883 | ENST00000379521 | + | 1 | 21 | 358_409 | 8 | 1025 | Zinc finger | RING-type%3B atypical |
| Hgene | >NFX1 | chr9:33290595 | chr9:33029883 | ENST00000379521 | + | 1 | 21 | 453_471 | 8 | 1025 | Zinc finger | Note=NF-X1-type 1 |
| Hgene | >NFX1 | chr9:33290595 | chr9:33029883 | ENST00000379521 | + | 1 | 21 | 506_525 | 8 | 1025 | Zinc finger | Note=NF-X1-type 2 |
| Hgene | >NFX1 | chr9:33290595 | chr9:33029883 | ENST00000379521 | + | 1 | 21 | 567_586 | 8 | 1025 | Zinc finger | Note=NF-X1-type 3 |
| Hgene | >NFX1 | chr9:33290595 | chr9:33029883 | ENST00000379521 | + | 1 | 21 | 632_655 | 8 | 1025 | Zinc finger | Note=NF-X1-type 4 |
| Hgene | >NFX1 | chr9:33290595 | chr9:33029883 | ENST00000379521 | + | 1 | 21 | 694_713 | 8 | 1025 | Zinc finger | Note=NF-X1-type 5 |
| Hgene | >NFX1 | chr9:33290595 | chr9:33029883 | ENST00000379521 | + | 1 | 21 | 721_740 | 8 | 1025 | Zinc finger | Note=NF-X1-type 6 |
| Hgene | >NFX1 | chr9:33290595 | chr9:33029883 | ENST00000379521 | + | 1 | 21 | 832_854 | 8 | 1025 | Zinc finger | Note=NF-X1-type 7 |
| Hgene | >NFX1 | chr9:33290595 | chr9:33029883 | ENST00000379521 | + | 1 | 21 | 863_884 | 8 | 1025 | Zinc finger | Note=NF-X1-type 8 |
| Hgene | >NFX1 | chr9:33290595 | chr9:33029883 | ENST00000379540 | + | 1 | 24 | 358_409 | 8 | 1121 | Zinc finger | RING-type%3B atypical |
| Hgene | >NFX1 | chr9:33290595 | chr9:33029883 | ENST00000379540 | + | 1 | 24 | 453_471 | 8 | 1121 | Zinc finger | Note=NF-X1-type 1 |
| Hgene | >NFX1 | chr9:33290595 | chr9:33029883 | ENST00000379540 | + | 1 | 24 | 506_525 | 8 | 1121 | Zinc finger | Note=NF-X1-type 2 |
| Hgene | >NFX1 | chr9:33290595 | chr9:33029883 | ENST00000379540 | + | 1 | 24 | 567_586 | 8 | 1121 | Zinc finger | Note=NF-X1-type 3 |
| Hgene | >NFX1 | chr9:33290595 | chr9:33029883 | ENST00000379540 | + | 1 | 24 | 632_655 | 8 | 1121 | Zinc finger | Note=NF-X1-type 4 |
| Hgene | >NFX1 | chr9:33290595 | chr9:33029883 | ENST00000379540 | + | 1 | 24 | 694_713 | 8 | 1121 | Zinc finger | Note=NF-X1-type 5 |
| Hgene | >NFX1 | chr9:33290595 | chr9:33029883 | ENST00000379540 | + | 1 | 24 | 721_740 | 8 | 1121 | Zinc finger | Note=NF-X1-type 6 |
| Hgene | >NFX1 | chr9:33290595 | chr9:33029883 | ENST00000379540 | + | 1 | 24 | 832_854 | 8 | 1121 | Zinc finger | Note=NF-X1-type 7 |
| Hgene | >NFX1 | chr9:33290595 | chr9:33029883 | ENST00000379540 | + | 1 | 24 | 863_884 | 8 | 1121 | Zinc finger | Note=NF-X1-type 8 |
| Hgene | >NFX1 | chr9:33319125 | chr9:33038683 | ENST00000318524 | + | 9 | 16 | 632_655 | 635 | 834 | Zinc finger | Note=NF-X1-type 4 |
| Hgene | >NFX1 | chr9:33319125 | chr9:33038683 | ENST00000318524 | + | 9 | 16 | 694_713 | 635 | 834 | Zinc finger | Note=NF-X1-type 5 |
| Hgene | >NFX1 | chr9:33319125 | chr9:33038683 | ENST00000318524 | + | 9 | 16 | 721_740 | 635 | 834 | Zinc finger | Note=NF-X1-type 6 |
| Hgene | >NFX1 | chr9:33319125 | chr9:33038683 | ENST00000318524 | + | 9 | 16 | 832_854 | 635 | 834 | Zinc finger | Note=NF-X1-type 7 |
| Hgene | >NFX1 | chr9:33319125 | chr9:33038683 | ENST00000318524 | + | 9 | 16 | 863_884 | 635 | 834 | Zinc finger | Note=NF-X1-type 8 |
| Hgene | >NFX1 | chr9:33319125 | chr9:33038683 | ENST00000379521 | + | 9 | 21 | 632_655 | 635 | 1025 | Zinc finger | Note=NF-X1-type 4 |
| Hgene | >NFX1 | chr9:33319125 | chr9:33038683 | ENST00000379521 | + | 9 | 21 | 694_713 | 635 | 1025 | Zinc finger | Note=NF-X1-type 5 |
| Hgene | >NFX1 | chr9:33319125 | chr9:33038683 | ENST00000379521 | + | 9 | 21 | 721_740 | 635 | 1025 | Zinc finger | Note=NF-X1-type 6 |
| Hgene | >NFX1 | chr9:33319125 | chr9:33038683 | ENST00000379521 | + | 9 | 21 | 832_854 | 635 | 1025 | Zinc finger | Note=NF-X1-type 7 |
| Hgene | >NFX1 | chr9:33319125 | chr9:33038683 | ENST00000379521 | + | 9 | 21 | 863_884 | 635 | 1025 | Zinc finger | Note=NF-X1-type 8 |
| Hgene | >NFX1 | chr9:33319125 | chr9:33038683 | ENST00000379540 | + | 9 | 24 | 632_655 | 635 | 1121 | Zinc finger | Note=NF-X1-type 4 |
| Hgene | >NFX1 | chr9:33319125 | chr9:33038683 | ENST00000379540 | + | 9 | 24 | 694_713 | 635 | 1121 | Zinc finger | Note=NF-X1-type 5 |
| Hgene | >NFX1 | chr9:33319125 | chr9:33038683 | ENST00000379540 | + | 9 | 24 | 721_740 | 635 | 1121 | Zinc finger | Note=NF-X1-type 6 |
| Hgene | >NFX1 | chr9:33319125 | chr9:33038683 | ENST00000379540 | + | 9 | 24 | 832_854 | 635 | 1121 | Zinc finger | Note=NF-X1-type 7 |
| Hgene | >NFX1 | chr9:33319125 | chr9:33038683 | ENST00000379540 | + | 9 | 24 | 863_884 | 635 | 1121 | Zinc finger | Note=NF-X1-type 8 |
| Tgene | DNAJA1 | chr9:33290595 | chr9:33029883 | ENST00000330899 | + | 2 | 9 | 75_96 | 103 | 398 | Compositional bias | Note=Gly-rich |
| Tgene | DNAJA1 | chr9:33319125 | chr9:33038683 | ENST00000330899 | + | 7 | 9 | 75_96 | 325 | 398 | Compositional bias | Note=Gly-rich |
| Tgene | DNAJA1 | chr9:33290595 | chr9:33029883 | ENST00000330899 | + | 2 | 9 | 6_68 | 103 | 398 | Domain | Note=J |
| Tgene | DNAJA1 | chr9:33319125 | chr9:33038683 | ENST00000330899 | + | 7 | 9 | 6_68 | 325 | 398 | Domain | Note=J |
| Tgene | DNAJA1 | chr9:33319125 | chr9:33038683 | ENST00000330899 | + | 7 | 9 | 134_141 | 325 | 398 | Repeat | Note=CXXCXGXG motif |
| Tgene | DNAJA1 | chr9:33319125 | chr9:33038683 | ENST00000330899 | + | 7 | 9 | 150_157 | 325 | 398 | Repeat | Note=CXXCXGXG motif |
| Tgene | DNAJA1 | chr9:33319125 | chr9:33038683 | ENST00000330899 | + | 7 | 9 | 177_184 | 325 | 398 | Repeat | Note=CXXCXGXG motif |
| Tgene | DNAJA1 | chr9:33319125 | chr9:33038683 | ENST00000330899 | + | 7 | 9 | 193_200 | 325 | 398 | Repeat | Note=CXXCXGXG motif |
| Tgene | DNAJA1 | chr9:33319125 | chr9:33038683 | ENST00000330899 | + | 7 | 9 | 121_205 | 325 | 398 | Zinc finger | Note=CR-type |
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FusionGeneSequence for NFX1_DNAJA1 |
| For in-frame fusion transcripts, we provide the fusion transcript sequences and fusion amino acid sequences. (nt: nucleotides, aa: amino acids) |
| * Fusion amino acid sequences. |
| >In-frame_NFX1_ENST00000379540_chr9_33290595_+_DNAJA1_ENST00000330899_chr9_33029883_+_303aa MAEAPPVSGKNVVHQLSVTLEDLYNGATRKLALQKNVICDKCEGRGGKKGAVECCPNCRGTGMQIRIHQIGPGMVQQIQSVCMECQGHGE RISPKDRCKSCNGRKIVREKKILEVHIDKGMKDGQKITFHGEGDQEPGLEPGDIIIVLDQKDHAVFTRRGEDLFMCMDIQLVEALCGFQK PISTLDNRTIVITSHPGQIVKHGDIKCVLNEGMPIYRRPYEKGRLIIEFKVNFPENGFLSPDKLSLLEKLLPERKEVEETDEMDQVELVD >In-frame_NFX1_ENST00000379521_chr9_33290595_+_DNAJA1_ENST00000330899_chr9_33029883_+_303aa MAEAPPVSGKNVVHQLSVTLEDLYNGATRKLALQKNVICDKCEGRGGKKGAVECCPNCRGTGMQIRIHQIGPGMVQQIQSVCMECQGHGE RISPKDRCKSCNGRKIVREKKILEVHIDKGMKDGQKITFHGEGDQEPGLEPGDIIIVLDQKDHAVFTRRGEDLFMCMDIQLVEALCGFQK PISTLDNRTIVITSHPGQIVKHGDIKCVLNEGMPIYRRPYEKGRLIIEFKVNFPENGFLSPDKLSLLEKLLPERKEVEETDEMDQVELVD >In-frame_NFX1_ENST00000318524_chr9_33290595_+_DNAJA1_ENST00000330899_chr9_33029883_+_303aa MAEAPPVSGKNVVHQLSVTLEDLYNGATRKLALQKNVICDKCEGRGGKKGAVECCPNCRGTGMQIRIHQIGPGMVQQIQSVCMECQGHGE RISPKDRCKSCNGRKIVREKKILEVHIDKGMKDGQKITFHGEGDQEPGLEPGDIIIVLDQKDHAVFTRRGEDLFMCMDIQLVEALCGFQK PISTLDNRTIVITSHPGQIVKHGDIKCVLNEGMPIYRRPYEKGRLIIEFKVNFPENGFLSPDKLSLLEKLLPERKEVEETDEMDQVELVD >In-frame_NFX1_ENST00000379540_chr9_33319125_+_DNAJA1_ENST00000330899_chr9_33038683_+_708aa MAEAPPVSGTFKFNTDAAEFIPQEKKNSGLNCGTQRRLDSNRIGRRNYSSPPPCHLSRQVPYDEISAVHQHSYHPSGSKPKSQQTSFQSS PCNKSPKSHGLQNQPWQKLRNEKHHIRVKKAQSLAEQTSDTAGLESSTRSESGTDLREHSPSESEKEVVGADPRGAKPKKATQFVYSYGR GPKVKGKLKCEWSNRTTPKPEDAGPESTKPVGVFHPDSSEASSRKGVLDGYGARRNEQRRYPQKRPPWEVEGARPRPGRNPPKQEGHRHT NAGHRNNMGPIPKDDLNERPAKSTCDSENLAVINKSSRRVDQEKCTVRRQDPQVVSPFSRGKQNHVLKNVETHTGSLIEQLTTEKYECMV CCELVRVTAPVWSCQSCYHVFHLNCIKKWARSPASQADGQSGWRCPACQNVSAHVPNTYTCFCGKVKNPEWSRNEIPHSCGEVCRKKQPG QDCPHSCNLLCHPGPCPPCPAFMTKTCECGRTRHTVRCGQAVSVHCSNPCENILNCGQHQCAELCHGGQCQPCQIILNQVCYCGSTSRDV LCGTDVGKSDGFGDFSCLKICGKDLKCGNHTCSQVCHPQPCQQCPRLPQLVRCCPCGQTPLSQLLELGSSSRKTCMDPVPSCGKVCGKPL >In-frame_NFX1_ENST00000379521_chr9_33319125_+_DNAJA1_ENST00000330899_chr9_33038683_+_708aa MAEAPPVSGTFKFNTDAAEFIPQEKKNSGLNCGTQRRLDSNRIGRRNYSSPPPCHLSRQVPYDEISAVHQHSYHPSGSKPKSQQTSFQSS PCNKSPKSHGLQNQPWQKLRNEKHHIRVKKAQSLAEQTSDTAGLESSTRSESGTDLREHSPSESEKEVVGADPRGAKPKKATQFVYSYGR GPKVKGKLKCEWSNRTTPKPEDAGPESTKPVGVFHPDSSEASSRKGVLDGYGARRNEQRRYPQKRPPWEVEGARPRPGRNPPKQEGHRHT NAGHRNNMGPIPKDDLNERPAKSTCDSENLAVINKSSRRVDQEKCTVRRQDPQVVSPFSRGKQNHVLKNVETHTGSLIEQLTTEKYECMV CCELVRVTAPVWSCQSCYHVFHLNCIKKWARSPASQADGQSGWRCPACQNVSAHVPNTYTCFCGKVKNPEWSRNEIPHSCGEVCRKKQPG QDCPHSCNLLCHPGPCPPCPAFMTKTCECGRTRHTVRCGQAVSVHCSNPCENILNCGQHQCAELCHGGQCQPCQIILNQVCYCGSTSRDV LCGTDVGKSDGFGDFSCLKICGKDLKCGNHTCSQVCHPQPCQQCPRLPQLVRCCPCGQTPLSQLLELGSSSRKTCMDPVPSCGKVCGKPL >In-frame_NFX1_ENST00000318524_chr9_33319125_+_DNAJA1_ENST00000330899_chr9_33038683_+_708aa MAEAPPVSGTFKFNTDAAEFIPQEKKNSGLNCGTQRRLDSNRIGRRNYSSPPPCHLSRQVPYDEISAVHQHSYHPSGSKPKSQQTSFQSS PCNKSPKSHGLQNQPWQKLRNEKHHIRVKKAQSLAEQTSDTAGLESSTRSESGTDLREHSPSESEKEVVGADPRGAKPKKATQFVYSYGR GPKVKGKLKCEWSNRTTPKPEDAGPESTKPVGVFHPDSSEASSRKGVLDGYGARRNEQRRYPQKRPPWEVEGARPRPGRNPPKQEGHRHT NAGHRNNMGPIPKDDLNERPAKSTCDSENLAVINKSSRRVDQEKCTVRRQDPQVVSPFSRGKQNHVLKNVETHTGSLIEQLTTEKYECMV CCELVRVTAPVWSCQSCYHVFHLNCIKKWARSPASQADGQSGWRCPACQNVSAHVPNTYTCFCGKVKNPEWSRNEIPHSCGEVCRKKQPG QDCPHSCNLLCHPGPCPPCPAFMTKTCECGRTRHTVRCGQAVSVHCSNPCENILNCGQHQCAELCHGGQCQPCQIILNQVCYCGSTSRDV LCGTDVGKSDGFGDFSCLKICGKDLKCGNHTCSQVCHPQPCQQCPRLPQLVRCCPCGQTPLSQLLELGSSSRKTCMDPVPSCGKVCGKPL |
| * Fusion transcript sequences (only coding sequence (CDS) region). |
| >In-frame_NFX1_ENST00000379540_chr9_33290595_+_DNAJA1_ENST00000330899_chr9_33029883_+_909nt ATGGCGGAGGCGCCTCCTGTCTCAGGTAAAAATGTTGTACATCAGCTCTCAGTAACCCTAGAAGACTTATATAATGGTGCAACAAGAAAA CTGGCTCTGCAAAAGAATGTGATTTGTGACAAATGTGAAGGTAGAGGAGGTAAGAAAGGAGCAGTAGAGTGCTGTCCCAATTGCCGAGGT ACTGGAATGCAAATAAGAATTCATCAGATAGGACCTGGAATGGTTCAGCAAATTCAGTCTGTGTGCATGGAGTGCCAGGGCCATGGGGAG CGGATCAGTCCTAAAGATAGATGTAAAAGCTGCAACGGAAGGAAGATAGTTCGAGAGAAGAAAATTTTAGAAGTTCATATTGACAAAGGC ATGAAAGATGGCCAGAAGATAACATTCCATGGTGAAGGAGACCAAGAACCAGGACTGGAGCCAGGCGATATTATCATTGTGTTAGATCAG AAGGACCATGCTGTTTTTACTCGACGAGGAGAAGACCTTTTCATGTGTATGGACATACAGCTCGTTGAAGCACTGTGTGGCTTCCAGAAG CCAATATCTACTCTTGACAACCGAACCATCGTCATCACCTCTCATCCAGGTCAGATTGTCAAGCATGGAGATATCAAGTGTGTACTAAAT GAAGGCATGCCAATTTATCGTAGACCATATGAAAAGGGTCGCCTAATCATCGAATTTAAGGTAAACTTTCCTGAGAATGGCTTTCTCTCT CCTGATAAACTGTCTTTGCTGGAAAAACTCCTACCCGAGAGGAAGGAAGTGGAAGAGACTGATGAGATGGACCAAGTAGAACTGGTGGAC TTTGATCCAAATCAGGAAAGACGGCGCCACTACAATGGAGAAGCATATGAGGATGATGAACATCATCCCAGAGGTGGTGTTCAGTGTCAG >In-frame_NFX1_ENST00000379521_chr9_33290595_+_DNAJA1_ENST00000330899_chr9_33029883_+_909nt ATGGCGGAGGCGCCTCCTGTCTCAGGTAAAAATGTTGTACATCAGCTCTCAGTAACCCTAGAAGACTTATATAATGGTGCAACAAGAAAA CTGGCTCTGCAAAAGAATGTGATTTGTGACAAATGTGAAGGTAGAGGAGGTAAGAAAGGAGCAGTAGAGTGCTGTCCCAATTGCCGAGGT ACTGGAATGCAAATAAGAATTCATCAGATAGGACCTGGAATGGTTCAGCAAATTCAGTCTGTGTGCATGGAGTGCCAGGGCCATGGGGAG CGGATCAGTCCTAAAGATAGATGTAAAAGCTGCAACGGAAGGAAGATAGTTCGAGAGAAGAAAATTTTAGAAGTTCATATTGACAAAGGC ATGAAAGATGGCCAGAAGATAACATTCCATGGTGAAGGAGACCAAGAACCAGGACTGGAGCCAGGCGATATTATCATTGTGTTAGATCAG AAGGACCATGCTGTTTTTACTCGACGAGGAGAAGACCTTTTCATGTGTATGGACATACAGCTCGTTGAAGCACTGTGTGGCTTCCAGAAG CCAATATCTACTCTTGACAACCGAACCATCGTCATCACCTCTCATCCAGGTCAGATTGTCAAGCATGGAGATATCAAGTGTGTACTAAAT GAAGGCATGCCAATTTATCGTAGACCATATGAAAAGGGTCGCCTAATCATCGAATTTAAGGTAAACTTTCCTGAGAATGGCTTTCTCTCT CCTGATAAACTGTCTTTGCTGGAAAAACTCCTACCCGAGAGGAAGGAAGTGGAAGAGACTGATGAGATGGACCAAGTAGAACTGGTGGAC TTTGATCCAAATCAGGAAAGACGGCGCCACTACAATGGAGAAGCATATGAGGATGATGAACATCATCCCAGAGGTGGTGTTCAGTGTCAG >In-frame_NFX1_ENST00000318524_chr9_33290595_+_DNAJA1_ENST00000330899_chr9_33029883_+_909nt ATGGCGGAGGCGCCTCCTGTCTCAGGTAAAAATGTTGTACATCAGCTCTCAGTAACCCTAGAAGACTTATATAATGGTGCAACAAGAAAA CTGGCTCTGCAAAAGAATGTGATTTGTGACAAATGTGAAGGTAGAGGAGGTAAGAAAGGAGCAGTAGAGTGCTGTCCCAATTGCCGAGGT ACTGGAATGCAAATAAGAATTCATCAGATAGGACCTGGAATGGTTCAGCAAATTCAGTCTGTGTGCATGGAGTGCCAGGGCCATGGGGAG CGGATCAGTCCTAAAGATAGATGTAAAAGCTGCAACGGAAGGAAGATAGTTCGAGAGAAGAAAATTTTAGAAGTTCATATTGACAAAGGC ATGAAAGATGGCCAGAAGATAACATTCCATGGTGAAGGAGACCAAGAACCAGGACTGGAGCCAGGCGATATTATCATTGTGTTAGATCAG AAGGACCATGCTGTTTTTACTCGACGAGGAGAAGACCTTTTCATGTGTATGGACATACAGCTCGTTGAAGCACTGTGTGGCTTCCAGAAG CCAATATCTACTCTTGACAACCGAACCATCGTCATCACCTCTCATCCAGGTCAGATTGTCAAGCATGGAGATATCAAGTGTGTACTAAAT GAAGGCATGCCAATTTATCGTAGACCATATGAAAAGGGTCGCCTAATCATCGAATTTAAGGTAAACTTTCCTGAGAATGGCTTTCTCTCT CCTGATAAACTGTCTTTGCTGGAAAAACTCCTACCCGAGAGGAAGGAAGTGGAAGAGACTGATGAGATGGACCAAGTAGAACTGGTGGAC TTTGATCCAAATCAGGAAAGACGGCGCCACTACAATGGAGAAGCATATGAGGATGATGAACATCATCCCAGAGGTGGTGTTCAGTGTCAG >In-frame_NFX1_ENST00000379540_chr9_33319125_+_DNAJA1_ENST00000330899_chr9_33038683_+_2125nt ATGGCGGAGGCGCCTCCTGTCTCAGGTACTTTTAAATTCAATACAGATGCTGCTGAATTCATTCCTCAGGAGAAAAAAAATTCTGGTCTA AATTGTGGGACTCAAAGGAGACTAGACTCTAATAGGATTGGTAGAAGAAATTACAGTTCACCACCTCCCTGTCACCTTTCCAGGCAGGTC CCTTATGATGAAATCTCTGCTGTTCATCAGCATAGTTATCATCCGTCAGGAAGCAAACCTAAGAGTCAGCAGACGTCTTTCCAGTCCTCT CCTTGTAATAAATCGCCCAAGAGCCATGGCCTTCAGAATCAACCTTGGCAGAAATTGAGGAATGAGAAGCACCATATCAGAGTCAAGAAA GCACAGAGTCTTGCTGAGCAGACCTCAGATACAGCTGGATTAGAGAGCTCGACCAGATCAGAGAGTGGGACAGACCTCAGAGAGCATAGT CCTTCTGAGAGTGAGAAGGAAGTTGTGGGTGCAGATCCCAGGGGAGCAAAACCCAAAAAAGCAACACAGTTTGTATACAGCTATGGTAGA GGACCAAAAGTCAAGGGGAAACTCAAATGTGAATGGAGTAACCGAACAACTCCAAAACCGGAGGATGCTGGACCCGAAAGTACCAAACCT GTGGGGGTTTTCCACCCTGACTCTTCAGAGGCATCCTCTAGAAAAGGAGTATTGGATGGGTATGGAGCCAGACGAAATGAGCAGAGAAGA TACCCACAGAAAAGGCCTCCCTGGGAAGTGGAGGGGGCCAGGCCACGACCAGGCAGAAATCCACCAAAACAGGAGGGCCACCGACATACA AACGCAGGACACAGAAACAACATGGGCCCCATTCCAAAGGATGACCTCAATGAAAGACCAGCAAAATCTACCTGTGACAGTGAGAACTTG GCAGTCATCAACAAGTCTTCCAGGAGGGTTGACCAAGAGAAATGCACTGTACGGAGGCAGGATCCTCAAGTAGTATCTCCTTTCTCCCGA GGCAAACAGAACCATGTGCTAAAGAATGTGGAAACGCACACAGGTTCTCTAATTGAACAACTAACAACAGAAAAATACGAGTGCATGGTG TGCTGTGAATTGGTTCGTGTCACGGCCCCAGTGTGGAGTTGTCAGAGCTGTTACCATGTGTTTCATTTGAACTGCATAAAGAAATGGGCA AGGTCTCCAGCATCTCAAGCAGATGGCCAGAGTGGTTGGAGGTGCCCTGCCTGTCAGAATGTTTCTGCACATGTTCCTAATACCTACACT TGTTTCTGTGGCAAGGTAAAGAATCCTGAGTGGAGCAGAAATGAAATTCCACATAGCTGTGGTGAGGTTTGTAGAAAGAAACAGCCTGGC CAGGACTGCCCACATTCCTGTAACCTTCTCTGCCATCCAGGACCCTGCCCACCCTGCCCTGCCTTTATGACAAAAACATGTGAATGTGGA CGAACCAGGCACACAGTTCGCTGTGGTCAGGCTGTCTCAGTCCACTGTTCTAACCCATGTGAGAATATTTTGAACTGTGGTCAGCACCAG TGTGCTGAGCTGTGCCATGGGGGTCAGTGCCAGCCTTGCCAGATCATTTTGAACCAGGTATGCTATTGCGGCAGCACCTCCCGAGATGTG TTATGTGGAACCGATGTAGGAAAGTCTGATGGATTTGGGGATTTCAGCTGTTTAAAGATATGTGGCAAGGACTTGAAATGCGGTAACCAT ACATGTTCGCAAGTGTGCCACCCTCAGCCCTGCCAGCAATGCCCACGGCTCCCCCAGCTGGTGCGCTGTTGCCCCTGTGGCCAAACTCCT CTCAGCCAATTGCTAGAACTTGGAAGTAGTAGTCGGAAAACATGCATGGACCCTGTGCCTTCATGTGGAAAAGTGTGCGGCAAGCCTCTG CCTTGTGGTTCCTTAGGTAAACTTTCCTGAGAATGGCTTTCTCTCTCCTGATAAACTGTCTTTGCTGGAAAAACTCCTACCCGAGAGGAA GGAAGTGGAAGAGACTGATGAGATGGACCAAGTAGAACTGGTGGACTTTGATCCAAATCAGGAAAGACGGCGCCACTACAATGGAGAAGC >In-frame_NFX1_ENST00000379521_chr9_33319125_+_DNAJA1_ENST00000330899_chr9_33038683_+_2125nt ATGGCGGAGGCGCCTCCTGTCTCAGGTACTTTTAAATTCAATACAGATGCTGCTGAATTCATTCCTCAGGAGAAAAAAAATTCTGGTCTA AATTGTGGGACTCAAAGGAGACTAGACTCTAATAGGATTGGTAGAAGAAATTACAGTTCACCACCTCCCTGTCACCTTTCCAGGCAGGTC CCTTATGATGAAATCTCTGCTGTTCATCAGCATAGTTATCATCCGTCAGGAAGCAAACCTAAGAGTCAGCAGACGTCTTTCCAGTCCTCT CCTTGTAATAAATCGCCCAAGAGCCATGGCCTTCAGAATCAACCTTGGCAGAAATTGAGGAATGAGAAGCACCATATCAGAGTCAAGAAA GCACAGAGTCTTGCTGAGCAGACCTCAGATACAGCTGGATTAGAGAGCTCGACCAGATCAGAGAGTGGGACAGACCTCAGAGAGCATAGT CCTTCTGAGAGTGAGAAGGAAGTTGTGGGTGCAGATCCCAGGGGAGCAAAACCCAAAAAAGCAACACAGTTTGTATACAGCTATGGTAGA GGACCAAAAGTCAAGGGGAAACTCAAATGTGAATGGAGTAACCGAACAACTCCAAAACCGGAGGATGCTGGACCCGAAAGTACCAAACCT GTGGGGGTTTTCCACCCTGACTCTTCAGAGGCATCCTCTAGAAAAGGAGTATTGGATGGGTATGGAGCCAGACGAAATGAGCAGAGAAGA TACCCACAGAAAAGGCCTCCCTGGGAAGTGGAGGGGGCCAGGCCACGACCAGGCAGAAATCCACCAAAACAGGAGGGCCACCGACATACA AACGCAGGACACAGAAACAACATGGGCCCCATTCCAAAGGATGACCTCAATGAAAGACCAGCAAAATCTACCTGTGACAGTGAGAACTTG GCAGTCATCAACAAGTCTTCCAGGAGGGTTGACCAAGAGAAATGCACTGTACGGAGGCAGGATCCTCAAGTAGTATCTCCTTTCTCCCGA GGCAAACAGAACCATGTGCTAAAGAATGTGGAAACGCACACAGGTTCTCTAATTGAACAACTAACAACAGAAAAATACGAGTGCATGGTG TGCTGTGAATTGGTTCGTGTCACGGCCCCAGTGTGGAGTTGTCAGAGCTGTTACCATGTGTTTCATTTGAACTGCATAAAGAAATGGGCA AGGTCTCCAGCATCTCAAGCAGATGGCCAGAGTGGTTGGAGGTGCCCTGCCTGTCAGAATGTTTCTGCACATGTTCCTAATACCTACACT TGTTTCTGTGGCAAGGTAAAGAATCCTGAGTGGAGCAGAAATGAAATTCCACATAGCTGTGGTGAGGTTTGTAGAAAGAAACAGCCTGGC CAGGACTGCCCACATTCCTGTAACCTTCTCTGCCATCCAGGACCCTGCCCACCCTGCCCTGCCTTTATGACAAAAACATGTGAATGTGGA CGAACCAGGCACACAGTTCGCTGTGGTCAGGCTGTCTCAGTCCACTGTTCTAACCCATGTGAGAATATTTTGAACTGTGGTCAGCACCAG TGTGCTGAGCTGTGCCATGGGGGTCAGTGCCAGCCTTGCCAGATCATTTTGAACCAGGTATGCTATTGCGGCAGCACCTCCCGAGATGTG TTATGTGGAACCGATGTAGGAAAGTCTGATGGATTTGGGGATTTCAGCTGTTTAAAGATATGTGGCAAGGACTTGAAATGCGGTAACCAT ACATGTTCGCAAGTGTGCCACCCTCAGCCCTGCCAGCAATGCCCACGGCTCCCCCAGCTGGTGCGCTGTTGCCCCTGTGGCCAAACTCCT CTCAGCCAATTGCTAGAACTTGGAAGTAGTAGTCGGAAAACATGCATGGACCCTGTGCCTTCATGTGGAAAAGTGTGCGGCAAGCCTCTG CCTTGTGGTTCCTTAGGTAAACTTTCCTGAGAATGGCTTTCTCTCTCCTGATAAACTGTCTTTGCTGGAAAAACTCCTACCCGAGAGGAA GGAAGTGGAAGAGACTGATGAGATGGACCAAGTAGAACTGGTGGACTTTGATCCAAATCAGGAAAGACGGCGCCACTACAATGGAGAAGC >In-frame_NFX1_ENST00000318524_chr9_33319125_+_DNAJA1_ENST00000330899_chr9_33038683_+_2125nt ATGGCGGAGGCGCCTCCTGTCTCAGGTACTTTTAAATTCAATACAGATGCTGCTGAATTCATTCCTCAGGAGAAAAAAAATTCTGGTCTA AATTGTGGGACTCAAAGGAGACTAGACTCTAATAGGATTGGTAGAAGAAATTACAGTTCACCACCTCCCTGTCACCTTTCCAGGCAGGTC CCTTATGATGAAATCTCTGCTGTTCATCAGCATAGTTATCATCCGTCAGGAAGCAAACCTAAGAGTCAGCAGACGTCTTTCCAGTCCTCT CCTTGTAATAAATCGCCCAAGAGCCATGGCCTTCAGAATCAACCTTGGCAGAAATTGAGGAATGAGAAGCACCATATCAGAGTCAAGAAA GCACAGAGTCTTGCTGAGCAGACCTCAGATACAGCTGGATTAGAGAGCTCGACCAGATCAGAGAGTGGGACAGACCTCAGAGAGCATAGT CCTTCTGAGAGTGAGAAGGAAGTTGTGGGTGCAGATCCCAGGGGAGCAAAACCCAAAAAAGCAACACAGTTTGTATACAGCTATGGTAGA GGACCAAAAGTCAAGGGGAAACTCAAATGTGAATGGAGTAACCGAACAACTCCAAAACCGGAGGATGCTGGACCCGAAAGTACCAAACCT GTGGGGGTTTTCCACCCTGACTCTTCAGAGGCATCCTCTAGAAAAGGAGTATTGGATGGGTATGGAGCCAGACGAAATGAGCAGAGAAGA TACCCACAGAAAAGGCCTCCCTGGGAAGTGGAGGGGGCCAGGCCACGACCAGGCAGAAATCCACCAAAACAGGAGGGCCACCGACATACA AACGCAGGACACAGAAACAACATGGGCCCCATTCCAAAGGATGACCTCAATGAAAGACCAGCAAAATCTACCTGTGACAGTGAGAACTTG GCAGTCATCAACAAGTCTTCCAGGAGGGTTGACCAAGAGAAATGCACTGTACGGAGGCAGGATCCTCAAGTAGTATCTCCTTTCTCCCGA GGCAAACAGAACCATGTGCTAAAGAATGTGGAAACGCACACAGGTTCTCTAATTGAACAACTAACAACAGAAAAATACGAGTGCATGGTG TGCTGTGAATTGGTTCGTGTCACGGCCCCAGTGTGGAGTTGTCAGAGCTGTTACCATGTGTTTCATTTGAACTGCATAAAGAAATGGGCA AGGTCTCCAGCATCTCAAGCAGATGGCCAGAGTGGTTGGAGGTGCCCTGCCTGTCAGAATGTTTCTGCACATGTTCCTAATACCTACACT TGTTTCTGTGGCAAGGTAAAGAATCCTGAGTGGAGCAGAAATGAAATTCCACATAGCTGTGGTGAGGTTTGTAGAAAGAAACAGCCTGGC CAGGACTGCCCACATTCCTGTAACCTTCTCTGCCATCCAGGACCCTGCCCACCCTGCCCTGCCTTTATGACAAAAACATGTGAATGTGGA CGAACCAGGCACACAGTTCGCTGTGGTCAGGCTGTCTCAGTCCACTGTTCTAACCCATGTGAGAATATTTTGAACTGTGGTCAGCACCAG TGTGCTGAGCTGTGCCATGGGGGTCAGTGCCAGCCTTGCCAGATCATTTTGAACCAGGTATGCTATTGCGGCAGCACCTCCCGAGATGTG TTATGTGGAACCGATGTAGGAAAGTCTGATGGATTTGGGGATTTCAGCTGTTTAAAGATATGTGGCAAGGACTTGAAATGCGGTAACCAT ACATGTTCGCAAGTGTGCCACCCTCAGCCCTGCCAGCAATGCCCACGGCTCCCCCAGCTGGTGCGCTGTTGCCCCTGTGGCCAAACTCCT CTCAGCCAATTGCTAGAACTTGGAAGTAGTAGTCGGAAAACATGCATGGACCCTGTGCCTTCATGTGGAAAAGTGTGCGGCAAGCCTCTG CCTTGTGGTTCCTTAGGTAAACTTTCCTGAGAATGGCTTTCTCTCTCCTGATAAACTGTCTTTGCTGGAAAAACTCCTACCCGAGAGGAA GGAAGTGGAAGAGACTGATGAGATGGACCAAGTAGAACTGGTGGACTTTGATCCAAATCAGGAAAGACGGCGCCACTACAATGGAGAAGC |
| * Fusion transcript sequences (Full-length transcript). |
| >In-frame_NFX1_ENST00000379540_chr9_33290595_+_DNAJA1_ENST00000330899_chr9_33029883_+_1975nt CACGTGACCTGGTGACAGTGCTGACTTGGCTGTACAGCTCGATCTAGGTTCTGCGGCACGGGATGGCGGAGGCGCCTCCTGTCTCAGGTA AAAATGTTGTACATCAGCTCTCAGTAACCCTAGAAGACTTATATAATGGTGCAACAAGAAAACTGGCTCTGCAAAAGAATGTGATTTGTG ACAAATGTGAAGGTAGAGGAGGTAAGAAAGGAGCAGTAGAGTGCTGTCCCAATTGCCGAGGTACTGGAATGCAAATAAGAATTCATCAGA TAGGACCTGGAATGGTTCAGCAAATTCAGTCTGTGTGCATGGAGTGCCAGGGCCATGGGGAGCGGATCAGTCCTAAAGATAGATGTAAAA GCTGCAACGGAAGGAAGATAGTTCGAGAGAAGAAAATTTTAGAAGTTCATATTGACAAAGGCATGAAAGATGGCCAGAAGATAACATTCC ATGGTGAAGGAGACCAAGAACCAGGACTGGAGCCAGGCGATATTATCATTGTGTTAGATCAGAAGGACCATGCTGTTTTTACTCGACGAG GAGAAGACCTTTTCATGTGTATGGACATACAGCTCGTTGAAGCACTGTGTGGCTTCCAGAAGCCAATATCTACTCTTGACAACCGAACCA TCGTCATCACCTCTCATCCAGGTCAGATTGTCAAGCATGGAGATATCAAGTGTGTACTAAATGAAGGCATGCCAATTTATCGTAGACCAT ATGAAAAGGGTCGCCTAATCATCGAATTTAAGGTAAACTTTCCTGAGAATGGCTTTCTCTCTCCTGATAAACTGTCTTTGCTGGAAAAAC TCCTACCCGAGAGGAAGGAAGTGGAAGAGACTGATGAGATGGACCAAGTAGAACTGGTGGACTTTGATCCAAATCAGGAAAGACGGCGCC ACTACAATGGAGAAGCATATGAGGATGATGAACATCATCCCAGAGGTGGTGTTCAGTGTCAGACCTCTTAATGGGCCAGTGAATAACACT CACTGCTGGCATTTAATGTGCAGTAGTGAATGAGTGAAGGACTGTAATCATAATATGCTCACTACTTGCTCTTGTTTTTGTTTTAATAAA CTATAGTAGTGTTTTAAAAAGTTAAATGAAGAATAAACGCAAATATAAAAGCTCTGATTTTGCCCTGTATGTATGATGACTTCAGTGTGC AAGATGAAGTTTAATACCTGTAAAAACTACAAAGAAGTTCCCCTAGCATTTCTAGGCCAAACCTTGTAATTGACTTCAGCTATGTACGTG GACAAGCTTAGACTGAAATGCTAGGTATATGTATTGGCTTCAGTGTATGACCCTTCATTGTTAAGCTATGAAAGTAAAACTCTGTATTTA ACTGGCAATGAGGAAAAAAAAATTTTGTAGAGAAGTGTTGGTCTGTATAGTTCTTTATATTAAGTGGGATTCATTGTAATGCCTCTGCAT TTATTCTGTTGCCTCAGCTGTTACTTGAAGATGGCGTAATATATAATTTATCCTGTGGTATCAGTGATAAAAATGATACCTTTCTGTAGG AGGGGTTTATCATAATATGCTGCTTCTTGAAGGCTTGCACTTCCAGAATTGTGTTTCCTTCTGCTGTGCCATTCATATATATATACATAT ATATATATAATCTTGACCAGTCCTGGTCATTTGCTCCCCTCCTTGTCTGTGGACCATGATAAGCCCAAGTAGTGACTTCAGAGCTGGGTA ACAGAAATTAAAGTGAAAAGACCTTTACGTGGAGAATTTGCATGCGTAATATAGGAAGGTGTTCTTTAGGTATGTTACAGGATTACTTTA AACCATTTGACTTTCGCTCCAAAGTTATGTTGGTAGTATAGCAAATTATGATGAATAGCTTTAATTGTATGTTTAAAAGTCTCATATGTT >In-frame_NFX1_ENST00000379521_chr9_33290595_+_DNAJA1_ENST00000330899_chr9_33029883_+_1974nt ACGTGACCTGGTGACAGTGCTGACTTGGCTGTACAGCTCGATCTAGGTTCTGCGGCACGGGATGGCGGAGGCGCCTCCTGTCTCAGGTAA AAATGTTGTACATCAGCTCTCAGTAACCCTAGAAGACTTATATAATGGTGCAACAAGAAAACTGGCTCTGCAAAAGAATGTGATTTGTGA CAAATGTGAAGGTAGAGGAGGTAAGAAAGGAGCAGTAGAGTGCTGTCCCAATTGCCGAGGTACTGGAATGCAAATAAGAATTCATCAGAT AGGACCTGGAATGGTTCAGCAAATTCAGTCTGTGTGCATGGAGTGCCAGGGCCATGGGGAGCGGATCAGTCCTAAAGATAGATGTAAAAG CTGCAACGGAAGGAAGATAGTTCGAGAGAAGAAAATTTTAGAAGTTCATATTGACAAAGGCATGAAAGATGGCCAGAAGATAACATTCCA TGGTGAAGGAGACCAAGAACCAGGACTGGAGCCAGGCGATATTATCATTGTGTTAGATCAGAAGGACCATGCTGTTTTTACTCGACGAGG AGAAGACCTTTTCATGTGTATGGACATACAGCTCGTTGAAGCACTGTGTGGCTTCCAGAAGCCAATATCTACTCTTGACAACCGAACCAT CGTCATCACCTCTCATCCAGGTCAGATTGTCAAGCATGGAGATATCAAGTGTGTACTAAATGAAGGCATGCCAATTTATCGTAGACCATA TGAAAAGGGTCGCCTAATCATCGAATTTAAGGTAAACTTTCCTGAGAATGGCTTTCTCTCTCCTGATAAACTGTCTTTGCTGGAAAAACT CCTACCCGAGAGGAAGGAAGTGGAAGAGACTGATGAGATGGACCAAGTAGAACTGGTGGACTTTGATCCAAATCAGGAAAGACGGCGCCA CTACAATGGAGAAGCATATGAGGATGATGAACATCATCCCAGAGGTGGTGTTCAGTGTCAGACCTCTTAATGGGCCAGTGAATAACACTC ACTGCTGGCATTTAATGTGCAGTAGTGAATGAGTGAAGGACTGTAATCATAATATGCTCACTACTTGCTCTTGTTTTTGTTTTAATAAAC TATAGTAGTGTTTTAAAAAGTTAAATGAAGAATAAACGCAAATATAAAAGCTCTGATTTTGCCCTGTATGTATGATGACTTCAGTGTGCA AGATGAAGTTTAATACCTGTAAAAACTACAAAGAAGTTCCCCTAGCATTTCTAGGCCAAACCTTGTAATTGACTTCAGCTATGTACGTGG ACAAGCTTAGACTGAAATGCTAGGTATATGTATTGGCTTCAGTGTATGACCCTTCATTGTTAAGCTATGAAAGTAAAACTCTGTATTTAA CTGGCAATGAGGAAAAAAAAATTTTGTAGAGAAGTGTTGGTCTGTATAGTTCTTTATATTAAGTGGGATTCATTGTAATGCCTCTGCATT TATTCTGTTGCCTCAGCTGTTACTTGAAGATGGCGTAATATATAATTTATCCTGTGGTATCAGTGATAAAAATGATACCTTTCTGTAGGA GGGGTTTATCATAATATGCTGCTTCTTGAAGGCTTGCACTTCCAGAATTGTGTTTCCTTCTGCTGTGCCATTCATATATATATACATATA TATATATAATCTTGACCAGTCCTGGTCATTTGCTCCCCTCCTTGTCTGTGGACCATGATAAGCCCAAGTAGTGACTTCAGAGCTGGGTAA CAGAAATTAAAGTGAAAAGACCTTTACGTGGAGAATTTGCATGCGTAATATAGGAAGGTGTTCTTTAGGTATGTTACAGGATTACTTTAA ACCATTTGACTTTCGCTCCAAAGTTATGTTGGTAGTATAGCAAATTATGATGAATAGCTTTAATTGTATGTTTAAAAGTCTCATATGTTC >In-frame_NFX1_ENST00000318524_chr9_33290595_+_DNAJA1_ENST00000330899_chr9_33029883_+_1941nt CAGCTCGATCTAGGTTCTGCGGCACGGGATGGCGGAGGCGCCTCCTGTCTCAGGTAAAAATGTTGTACATCAGCTCTCAGTAACCCTAGA AGACTTATATAATGGTGCAACAAGAAAACTGGCTCTGCAAAAGAATGTGATTTGTGACAAATGTGAAGGTAGAGGAGGTAAGAAAGGAGC AGTAGAGTGCTGTCCCAATTGCCGAGGTACTGGAATGCAAATAAGAATTCATCAGATAGGACCTGGAATGGTTCAGCAAATTCAGTCTGT GTGCATGGAGTGCCAGGGCCATGGGGAGCGGATCAGTCCTAAAGATAGATGTAAAAGCTGCAACGGAAGGAAGATAGTTCGAGAGAAGAA AATTTTAGAAGTTCATATTGACAAAGGCATGAAAGATGGCCAGAAGATAACATTCCATGGTGAAGGAGACCAAGAACCAGGACTGGAGCC AGGCGATATTATCATTGTGTTAGATCAGAAGGACCATGCTGTTTTTACTCGACGAGGAGAAGACCTTTTCATGTGTATGGACATACAGCT CGTTGAAGCACTGTGTGGCTTCCAGAAGCCAATATCTACTCTTGACAACCGAACCATCGTCATCACCTCTCATCCAGGTCAGATTGTCAA GCATGGAGATATCAAGTGTGTACTAAATGAAGGCATGCCAATTTATCGTAGACCATATGAAAAGGGTCGCCTAATCATCGAATTTAAGGT AAACTTTCCTGAGAATGGCTTTCTCTCTCCTGATAAACTGTCTTTGCTGGAAAAACTCCTACCCGAGAGGAAGGAAGTGGAAGAGACTGA TGAGATGGACCAAGTAGAACTGGTGGACTTTGATCCAAATCAGGAAAGACGGCGCCACTACAATGGAGAAGCATATGAGGATGATGAACA TCATCCCAGAGGTGGTGTTCAGTGTCAGACCTCTTAATGGGCCAGTGAATAACACTCACTGCTGGCATTTAATGTGCAGTAGTGAATGAG TGAAGGACTGTAATCATAATATGCTCACTACTTGCTCTTGTTTTTGTTTTAATAAACTATAGTAGTGTTTTAAAAAGTTAAATGAAGAAT AAACGCAAATATAAAAGCTCTGATTTTGCCCTGTATGTATGATGACTTCAGTGTGCAAGATGAAGTTTAATACCTGTAAAAACTACAAAG AAGTTCCCCTAGCATTTCTAGGCCAAACCTTGTAATTGACTTCAGCTATGTACGTGGACAAGCTTAGACTGAAATGCTAGGTATATGTAT TGGCTTCAGTGTATGACCCTTCATTGTTAAGCTATGAAAGTAAAACTCTGTATTTAACTGGCAATGAGGAAAAAAAAATTTTGTAGAGAA GTGTTGGTCTGTATAGTTCTTTATATTAAGTGGGATTCATTGTAATGCCTCTGCATTTATTCTGTTGCCTCAGCTGTTACTTGAAGATGG CGTAATATATAATTTATCCTGTGGTATCAGTGATAAAAATGATACCTTTCTGTAGGAGGGGTTTATCATAATATGCTGCTTCTTGAAGGC TTGCACTTCCAGAATTGTGTTTCCTTCTGCTGTGCCATTCATATATATATACATATATATATATAATCTTGACCAGTCCTGGTCATTTGC TCCCCTCCTTGTCTGTGGACCATGATAAGCCCAAGTAGTGACTTCAGAGCTGGGTAACAGAAATTAAAGTGAAAAGACCTTTACGTGGAG AATTTGCATGCGTAATATAGGAAGGTGTTCTTTAGGTATGTTACAGGATTACTTTAAACCATTTGACTTTCGCTCCAAAGTTATGTTGGT AGTATAGCAAATTATGATGAATAGCTTTAATTGTATGTTTAAAAGTCTCATATGTTCACATGCTTAAATCTGGGTATCAGAATTTAAGCA >In-frame_NFX1_ENST00000379540_chr9_33319125_+_DNAJA1_ENST00000330899_chr9_33038683_+_3191nt CACGTGACCTGGTGACAGTGCTGACTTGGCTGTACAGCTCGATCTAGGTTCTGCGGCACGGGATGGCGGAGGCGCCTCCTGTCTCAGGTA CTTTTAAATTCAATACAGATGCTGCTGAATTCATTCCTCAGGAGAAAAAAAATTCTGGTCTAAATTGTGGGACTCAAAGGAGACTAGACT CTAATAGGATTGGTAGAAGAAATTACAGTTCACCACCTCCCTGTCACCTTTCCAGGCAGGTCCCTTATGATGAAATCTCTGCTGTTCATC AGCATAGTTATCATCCGTCAGGAAGCAAACCTAAGAGTCAGCAGACGTCTTTCCAGTCCTCTCCTTGTAATAAATCGCCCAAGAGCCATG GCCTTCAGAATCAACCTTGGCAGAAATTGAGGAATGAGAAGCACCATATCAGAGTCAAGAAAGCACAGAGTCTTGCTGAGCAGACCTCAG ATACAGCTGGATTAGAGAGCTCGACCAGATCAGAGAGTGGGACAGACCTCAGAGAGCATAGTCCTTCTGAGAGTGAGAAGGAAGTTGTGG GTGCAGATCCCAGGGGAGCAAAACCCAAAAAAGCAACACAGTTTGTATACAGCTATGGTAGAGGACCAAAAGTCAAGGGGAAACTCAAAT GTGAATGGAGTAACCGAACAACTCCAAAACCGGAGGATGCTGGACCCGAAAGTACCAAACCTGTGGGGGTTTTCCACCCTGACTCTTCAG AGGCATCCTCTAGAAAAGGAGTATTGGATGGGTATGGAGCCAGACGAAATGAGCAGAGAAGATACCCACAGAAAAGGCCTCCCTGGGAAG TGGAGGGGGCCAGGCCACGACCAGGCAGAAATCCACCAAAACAGGAGGGCCACCGACATACAAACGCAGGACACAGAAACAACATGGGCC CCATTCCAAAGGATGACCTCAATGAAAGACCAGCAAAATCTACCTGTGACAGTGAGAACTTGGCAGTCATCAACAAGTCTTCCAGGAGGG TTGACCAAGAGAAATGCACTGTACGGAGGCAGGATCCTCAAGTAGTATCTCCTTTCTCCCGAGGCAAACAGAACCATGTGCTAAAGAATG TGGAAACGCACACAGGTTCTCTAATTGAACAACTAACAACAGAAAAATACGAGTGCATGGTGTGCTGTGAATTGGTTCGTGTCACGGCCC CAGTGTGGAGTTGTCAGAGCTGTTACCATGTGTTTCATTTGAACTGCATAAAGAAATGGGCAAGGTCTCCAGCATCTCAAGCAGATGGCC AGAGTGGTTGGAGGTGCCCTGCCTGTCAGAATGTTTCTGCACATGTTCCTAATACCTACACTTGTTTCTGTGGCAAGGTAAAGAATCCTG AGTGGAGCAGAAATGAAATTCCACATAGCTGTGGTGAGGTTTGTAGAAAGAAACAGCCTGGCCAGGACTGCCCACATTCCTGTAACCTTC TCTGCCATCCAGGACCCTGCCCACCCTGCCCTGCCTTTATGACAAAAACATGTGAATGTGGACGAACCAGGCACACAGTTCGCTGTGGTC AGGCTGTCTCAGTCCACTGTTCTAACCCATGTGAGAATATTTTGAACTGTGGTCAGCACCAGTGTGCTGAGCTGTGCCATGGGGGTCAGT GCCAGCCTTGCCAGATCATTTTGAACCAGGTATGCTATTGCGGCAGCACCTCCCGAGATGTGTTATGTGGAACCGATGTAGGAAAGTCTG ATGGATTTGGGGATTTCAGCTGTTTAAAGATATGTGGCAAGGACTTGAAATGCGGTAACCATACATGTTCGCAAGTGTGCCACCCTCAGC CCTGCCAGCAATGCCCACGGCTCCCCCAGCTGGTGCGCTGTTGCCCCTGTGGCCAAACTCCTCTCAGCCAATTGCTAGAACTTGGAAGTA GTAGTCGGAAAACATGCATGGACCCTGTGCCTTCATGTGGAAAAGTGTGCGGCAAGCCTCTGCCTTGTGGTTCCTTAGGTAAACTTTCCT GAGAATGGCTTTCTCTCTCCTGATAAACTGTCTTTGCTGGAAAAACTCCTACCCGAGAGGAAGGAAGTGGAAGAGACTGATGAGATGGAC CAAGTAGAACTGGTGGACTTTGATCCAAATCAGGAAAGACGGCGCCACTACAATGGAGAAGCATATGAGGATGATGAACATCATCCCAGA GGTGGTGTTCAGTGTCAGACCTCTTAATGGGCCAGTGAATAACACTCACTGCTGGCATTTAATGTGCAGTAGTGAATGAGTGAAGGACTG TAATCATAATATGCTCACTACTTGCTCTTGTTTTTGTTTTAATAAACTATAGTAGTGTTTTAAAAAGTTAAATGAAGAATAAACGCAAAT ATAAAAGCTCTGATTTTGCCCTGTATGTATGATGACTTCAGTGTGCAAGATGAAGTTTAATACCTGTAAAAACTACAAAGAAGTTCCCCT AGCATTTCTAGGCCAAACCTTGTAATTGACTTCAGCTATGTACGTGGACAAGCTTAGACTGAAATGCTAGGTATATGTATTGGCTTCAGT GTATGACCCTTCATTGTTAAGCTATGAAAGTAAAACTCTGTATTTAACTGGCAATGAGGAAAAAAAAATTTTGTAGAGAAGTGTTGGTCT GTATAGTTCTTTATATTAAGTGGGATTCATTGTAATGCCTCTGCATTTATTCTGTTGCCTCAGCTGTTACTTGAAGATGGCGTAATATAT AATTTATCCTGTGGTATCAGTGATAAAAATGATACCTTTCTGTAGGAGGGGTTTATCATAATATGCTGCTTCTTGAAGGCTTGCACTTCC AGAATTGTGTTTCCTTCTGCTGTGCCATTCATATATATATACATATATATATATAATCTTGACCAGTCCTGGTCATTTGCTCCCCTCCTT GTCTGTGGACCATGATAAGCCCAAGTAGTGACTTCAGAGCTGGGTAACAGAAATTAAAGTGAAAAGACCTTTACGTGGAGAATTTGCATG CGTAATATAGGAAGGTGTTCTTTAGGTATGTTACAGGATTACTTTAAACCATTTGACTTTCGCTCCAAAGTTATGTTGGTAGTATAGCAA ATTATGATGAATAGCTTTAATTGTATGTTTAAAAGTCTCATATGTTCACATGCTTAAATCTGGGTATCAGAATTTAAGCAATTCTTGAAA >In-frame_NFX1_ENST00000379521_chr9_33319125_+_DNAJA1_ENST00000330899_chr9_33038683_+_3190nt ACGTGACCTGGTGACAGTGCTGACTTGGCTGTACAGCTCGATCTAGGTTCTGCGGCACGGGATGGCGGAGGCGCCTCCTGTCTCAGGTAC TTTTAAATTCAATACAGATGCTGCTGAATTCATTCCTCAGGAGAAAAAAAATTCTGGTCTAAATTGTGGGACTCAAAGGAGACTAGACTC TAATAGGATTGGTAGAAGAAATTACAGTTCACCACCTCCCTGTCACCTTTCCAGGCAGGTCCCTTATGATGAAATCTCTGCTGTTCATCA GCATAGTTATCATCCGTCAGGAAGCAAACCTAAGAGTCAGCAGACGTCTTTCCAGTCCTCTCCTTGTAATAAATCGCCCAAGAGCCATGG CCTTCAGAATCAACCTTGGCAGAAATTGAGGAATGAGAAGCACCATATCAGAGTCAAGAAAGCACAGAGTCTTGCTGAGCAGACCTCAGA TACAGCTGGATTAGAGAGCTCGACCAGATCAGAGAGTGGGACAGACCTCAGAGAGCATAGTCCTTCTGAGAGTGAGAAGGAAGTTGTGGG TGCAGATCCCAGGGGAGCAAAACCCAAAAAAGCAACACAGTTTGTATACAGCTATGGTAGAGGACCAAAAGTCAAGGGGAAACTCAAATG TGAATGGAGTAACCGAACAACTCCAAAACCGGAGGATGCTGGACCCGAAAGTACCAAACCTGTGGGGGTTTTCCACCCTGACTCTTCAGA GGCATCCTCTAGAAAAGGAGTATTGGATGGGTATGGAGCCAGACGAAATGAGCAGAGAAGATACCCACAGAAAAGGCCTCCCTGGGAAGT GGAGGGGGCCAGGCCACGACCAGGCAGAAATCCACCAAAACAGGAGGGCCACCGACATACAAACGCAGGACACAGAAACAACATGGGCCC CATTCCAAAGGATGACCTCAATGAAAGACCAGCAAAATCTACCTGTGACAGTGAGAACTTGGCAGTCATCAACAAGTCTTCCAGGAGGGT TGACCAAGAGAAATGCACTGTACGGAGGCAGGATCCTCAAGTAGTATCTCCTTTCTCCCGAGGCAAACAGAACCATGTGCTAAAGAATGT GGAAACGCACACAGGTTCTCTAATTGAACAACTAACAACAGAAAAATACGAGTGCATGGTGTGCTGTGAATTGGTTCGTGTCACGGCCCC AGTGTGGAGTTGTCAGAGCTGTTACCATGTGTTTCATTTGAACTGCATAAAGAAATGGGCAAGGTCTCCAGCATCTCAAGCAGATGGCCA GAGTGGTTGGAGGTGCCCTGCCTGTCAGAATGTTTCTGCACATGTTCCTAATACCTACACTTGTTTCTGTGGCAAGGTAAAGAATCCTGA GTGGAGCAGAAATGAAATTCCACATAGCTGTGGTGAGGTTTGTAGAAAGAAACAGCCTGGCCAGGACTGCCCACATTCCTGTAACCTTCT CTGCCATCCAGGACCCTGCCCACCCTGCCCTGCCTTTATGACAAAAACATGTGAATGTGGACGAACCAGGCACACAGTTCGCTGTGGTCA GGCTGTCTCAGTCCACTGTTCTAACCCATGTGAGAATATTTTGAACTGTGGTCAGCACCAGTGTGCTGAGCTGTGCCATGGGGGTCAGTG CCAGCCTTGCCAGATCATTTTGAACCAGGTATGCTATTGCGGCAGCACCTCCCGAGATGTGTTATGTGGAACCGATGTAGGAAAGTCTGA TGGATTTGGGGATTTCAGCTGTTTAAAGATATGTGGCAAGGACTTGAAATGCGGTAACCATACATGTTCGCAAGTGTGCCACCCTCAGCC CTGCCAGCAATGCCCACGGCTCCCCCAGCTGGTGCGCTGTTGCCCCTGTGGCCAAACTCCTCTCAGCCAATTGCTAGAACTTGGAAGTAG TAGTCGGAAAACATGCATGGACCCTGTGCCTTCATGTGGAAAAGTGTGCGGCAAGCCTCTGCCTTGTGGTTCCTTAGGTAAACTTTCCTG AGAATGGCTTTCTCTCTCCTGATAAACTGTCTTTGCTGGAAAAACTCCTACCCGAGAGGAAGGAAGTGGAAGAGACTGATGAGATGGACC AAGTAGAACTGGTGGACTTTGATCCAAATCAGGAAAGACGGCGCCACTACAATGGAGAAGCATATGAGGATGATGAACATCATCCCAGAG GTGGTGTTCAGTGTCAGACCTCTTAATGGGCCAGTGAATAACACTCACTGCTGGCATTTAATGTGCAGTAGTGAATGAGTGAAGGACTGT AATCATAATATGCTCACTACTTGCTCTTGTTTTTGTTTTAATAAACTATAGTAGTGTTTTAAAAAGTTAAATGAAGAATAAACGCAAATA TAAAAGCTCTGATTTTGCCCTGTATGTATGATGACTTCAGTGTGCAAGATGAAGTTTAATACCTGTAAAAACTACAAAGAAGTTCCCCTA GCATTTCTAGGCCAAACCTTGTAATTGACTTCAGCTATGTACGTGGACAAGCTTAGACTGAAATGCTAGGTATATGTATTGGCTTCAGTG TATGACCCTTCATTGTTAAGCTATGAAAGTAAAACTCTGTATTTAACTGGCAATGAGGAAAAAAAAATTTTGTAGAGAAGTGTTGGTCTG TATAGTTCTTTATATTAAGTGGGATTCATTGTAATGCCTCTGCATTTATTCTGTTGCCTCAGCTGTTACTTGAAGATGGCGTAATATATA ATTTATCCTGTGGTATCAGTGATAAAAATGATACCTTTCTGTAGGAGGGGTTTATCATAATATGCTGCTTCTTGAAGGCTTGCACTTCCA GAATTGTGTTTCCTTCTGCTGTGCCATTCATATATATATACATATATATATATAATCTTGACCAGTCCTGGTCATTTGCTCCCCTCCTTG TCTGTGGACCATGATAAGCCCAAGTAGTGACTTCAGAGCTGGGTAACAGAAATTAAAGTGAAAAGACCTTTACGTGGAGAATTTGCATGC GTAATATAGGAAGGTGTTCTTTAGGTATGTTACAGGATTACTTTAAACCATTTGACTTTCGCTCCAAAGTTATGTTGGTAGTATAGCAAA TTATGATGAATAGCTTTAATTGTATGTTTAAAAGTCTCATATGTTCACATGCTTAAATCTGGGTATCAGAATTTAAGCAATTCTTGAAAT >In-frame_NFX1_ENST00000318524_chr9_33319125_+_DNAJA1_ENST00000330899_chr9_33038683_+_3157nt CAGCTCGATCTAGGTTCTGCGGCACGGGATGGCGGAGGCGCCTCCTGTCTCAGGTACTTTTAAATTCAATACAGATGCTGCTGAATTCAT TCCTCAGGAGAAAAAAAATTCTGGTCTAAATTGTGGGACTCAAAGGAGACTAGACTCTAATAGGATTGGTAGAAGAAATTACAGTTCACC ACCTCCCTGTCACCTTTCCAGGCAGGTCCCTTATGATGAAATCTCTGCTGTTCATCAGCATAGTTATCATCCGTCAGGAAGCAAACCTAA GAGTCAGCAGACGTCTTTCCAGTCCTCTCCTTGTAATAAATCGCCCAAGAGCCATGGCCTTCAGAATCAACCTTGGCAGAAATTGAGGAA TGAGAAGCACCATATCAGAGTCAAGAAAGCACAGAGTCTTGCTGAGCAGACCTCAGATACAGCTGGATTAGAGAGCTCGACCAGATCAGA GAGTGGGACAGACCTCAGAGAGCATAGTCCTTCTGAGAGTGAGAAGGAAGTTGTGGGTGCAGATCCCAGGGGAGCAAAACCCAAAAAAGC AACACAGTTTGTATACAGCTATGGTAGAGGACCAAAAGTCAAGGGGAAACTCAAATGTGAATGGAGTAACCGAACAACTCCAAAACCGGA GGATGCTGGACCCGAAAGTACCAAACCTGTGGGGGTTTTCCACCCTGACTCTTCAGAGGCATCCTCTAGAAAAGGAGTATTGGATGGGTA TGGAGCCAGACGAAATGAGCAGAGAAGATACCCACAGAAAAGGCCTCCCTGGGAAGTGGAGGGGGCCAGGCCACGACCAGGCAGAAATCC ACCAAAACAGGAGGGCCACCGACATACAAACGCAGGACACAGAAACAACATGGGCCCCATTCCAAAGGATGACCTCAATGAAAGACCAGC AAAATCTACCTGTGACAGTGAGAACTTGGCAGTCATCAACAAGTCTTCCAGGAGGGTTGACCAAGAGAAATGCACTGTACGGAGGCAGGA TCCTCAAGTAGTATCTCCTTTCTCCCGAGGCAAACAGAACCATGTGCTAAAGAATGTGGAAACGCACACAGGTTCTCTAATTGAACAACT AACAACAGAAAAATACGAGTGCATGGTGTGCTGTGAATTGGTTCGTGTCACGGCCCCAGTGTGGAGTTGTCAGAGCTGTTACCATGTGTT TCATTTGAACTGCATAAAGAAATGGGCAAGGTCTCCAGCATCTCAAGCAGATGGCCAGAGTGGTTGGAGGTGCCCTGCCTGTCAGAATGT TTCTGCACATGTTCCTAATACCTACACTTGTTTCTGTGGCAAGGTAAAGAATCCTGAGTGGAGCAGAAATGAAATTCCACATAGCTGTGG TGAGGTTTGTAGAAAGAAACAGCCTGGCCAGGACTGCCCACATTCCTGTAACCTTCTCTGCCATCCAGGACCCTGCCCACCCTGCCCTGC CTTTATGACAAAAACATGTGAATGTGGACGAACCAGGCACACAGTTCGCTGTGGTCAGGCTGTCTCAGTCCACTGTTCTAACCCATGTGA GAATATTTTGAACTGTGGTCAGCACCAGTGTGCTGAGCTGTGCCATGGGGGTCAGTGCCAGCCTTGCCAGATCATTTTGAACCAGGTATG CTATTGCGGCAGCACCTCCCGAGATGTGTTATGTGGAACCGATGTAGGAAAGTCTGATGGATTTGGGGATTTCAGCTGTTTAAAGATATG TGGCAAGGACTTGAAATGCGGTAACCATACATGTTCGCAAGTGTGCCACCCTCAGCCCTGCCAGCAATGCCCACGGCTCCCCCAGCTGGT GCGCTGTTGCCCCTGTGGCCAAACTCCTCTCAGCCAATTGCTAGAACTTGGAAGTAGTAGTCGGAAAACATGCATGGACCCTGTGCCTTC ATGTGGAAAAGTGTGCGGCAAGCCTCTGCCTTGTGGTTCCTTAGGTAAACTTTCCTGAGAATGGCTTTCTCTCTCCTGATAAACTGTCTT TGCTGGAAAAACTCCTACCCGAGAGGAAGGAAGTGGAAGAGACTGATGAGATGGACCAAGTAGAACTGGTGGACTTTGATCCAAATCAGG AAAGACGGCGCCACTACAATGGAGAAGCATATGAGGATGATGAACATCATCCCAGAGGTGGTGTTCAGTGTCAGACCTCTTAATGGGCCA GTGAATAACACTCACTGCTGGCATTTAATGTGCAGTAGTGAATGAGTGAAGGACTGTAATCATAATATGCTCACTACTTGCTCTTGTTTT TGTTTTAATAAACTATAGTAGTGTTTTAAAAAGTTAAATGAAGAATAAACGCAAATATAAAAGCTCTGATTTTGCCCTGTATGTATGATG ACTTCAGTGTGCAAGATGAAGTTTAATACCTGTAAAAACTACAAAGAAGTTCCCCTAGCATTTCTAGGCCAAACCTTGTAATTGACTTCA GCTATGTACGTGGACAAGCTTAGACTGAAATGCTAGGTATATGTATTGGCTTCAGTGTATGACCCTTCATTGTTAAGCTATGAAAGTAAA ACTCTGTATTTAACTGGCAATGAGGAAAAAAAAATTTTGTAGAGAAGTGTTGGTCTGTATAGTTCTTTATATTAAGTGGGATTCATTGTA ATGCCTCTGCATTTATTCTGTTGCCTCAGCTGTTACTTGAAGATGGCGTAATATATAATTTATCCTGTGGTATCAGTGATAAAAATGATA CCTTTCTGTAGGAGGGGTTTATCATAATATGCTGCTTCTTGAAGGCTTGCACTTCCAGAATTGTGTTTCCTTCTGCTGTGCCATTCATAT ATATATACATATATATATATAATCTTGACCAGTCCTGGTCATTTGCTCCCCTCCTTGTCTGTGGACCATGATAAGCCCAAGTAGTGACTT CAGAGCTGGGTAACAGAAATTAAAGTGAAAAGACCTTTACGTGGAGAATTTGCATGCGTAATATAGGAAGGTGTTCTTTAGGTATGTTAC AGGATTACTTTAAACCATTTGACTTTCGCTCCAAAGTTATGTTGGTAGTATAGCAAATTATGATGAATAGCTTTAATTGTATGTTTAAAA GTCTCATATGTTCACATGCTTAAATCTGGGTATCAGAATTTAAGCAATTCTTGAAATGTATTGTCTCCTTAATATACTAATTACAAAGCA |
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FusionGenePPI for NFX1_DNAJA1 |
| Go to ChiPPI (Chimeric Protein-Protein interactions) to see the chimeric PPI interaction in . |
| Protein-protein interactors with each fusion partner protein in wild-type (BIOGRID-3.4.160) |
| Hgene | Hgene's interactors | Tgene | Tgene's interactors |
| NFX1 | UBE2N, MAML3, SIN3A, USP9X, PABPC1, EEF1A2, MATR3, PABPC3, HSPA1A, HNRNPM, HNRNPU, RPL13, SRSF4, HIST1H2AE, RPL7A, FAM208B, LARP1, DDX5, DMD, NCL, RPL13A, RPL17, RPL22, RPL3, RPL6, HNRNPA2B1, HNRNPH1, RPS19, RPS3A, SRSF3, APC2, YBX1, HIST1H4E, HECW2, SHMT2, MOV10, NXF1, BMI1, XPO1, FAM46A, APBA3, ZNF263, UBC | DNAJA1 | OSGEP, UQCRC1, ARL4D, CD58, TM4SF1, NELFCD, HSPA8, CFTR, PTTG1, PARK2, GPR37, SRRM2, SRRM1, UBC, AGO3, AGO4, HDAC5, PSMA3, CAV2, NUDT3, BCS1L, HMGCL, PCK1, VHL, HDGF, SIRT7, FBXO25, ERG, CUL3, CUL4B, CUL5, CUL2, CUL1, COPS5, LRRK1, LRRK2, HTT, UBASH3B, SHC1, PACRG, HSPA9, TPP1, PSAP, SPTAN1, TRA2B, KCNH2, BRCA1, PAXIP1, YWHAE, KCNQ4, IQCB1, HSP90AA1, NOS2, METTL21B, METTL23, PAN2, NPM1, SOX2, HDAC2, HDAC6, HDAC10, HDAC11, EGFR, HIVEP1, CDC16, LSM2, FBXO6, AIMP1, EEF1B2, RARS, EEF1E1, EIF2S3, IQGAP1, QARS, RPLP0, ASB5, DNAJA4, NUDC, TP53, HUWE1, PCSK9, HSPA1A, HSPA6, OBSL1, SUZ12, AATK, ARAF, ILK, IRAK1, LIMK2, RAF1, HERC2, ENDOG, OSBPL11, OSBPL9, PLD2, UQCRQ, CCNJL, FRMD5, LLGL2, NF2, RPS6KB2, NTRK1, ACADM, AHSA1, CANX, CCT2, CCT3, CLGN, CAD, CCT6A, CCT6B, HSPA4, HSPA4L, HSPH1, PPP4R2, PSMC2, FAF1, HSPA5, HYOU1, KPNA4, LDHB, PRKCSH, PSMC5, PSMC6, PSMD11, USO1, PTEN, OFD1, MKS1, CEP44, RPGR, STIL, XRCC3, TUBA1C, RNF207, CRY1, GLIS3, MCM2, SNW1, CDC5L, EID1, OTUB1, ERBB3, ESRRB, NFATC2, PGR, CDC73, WWP2, MTMR11, CYLD, DLD, DNM1L, PDHA1, FOXA1, TRIM25, G3BP1, CCND2, UBE2A, TES |
| - Retained PPIs in in-frame fusion. |
| Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Still interaction with |
| Hgene | NFX1 | chr9:33319125 | chr9:33038683 | ENST00000318524 | + | 9 | 16 | 9_26 | 635 | 834 | PABPC1 and PABC4 |
| Hgene | NFX1 | chr9:33319125 | chr9:33038683 | ENST00000379521 | + | 9 | 21 | 9_26 | 635 | 1025 | PABPC1 and PABC4 |
| Hgene | NFX1 | chr9:33319125 | chr9:33038683 | ENST00000379540 | + | 9 | 24 | 9_26 | 635 | 1121 | PABPC1 and PABC4 |
| - Lost PPIs in in-frame fusion. |
| Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Interaction lost with |
| Hgene | NFX1 | chr9:33290595 | chr9:33029883 | ENST00000318524 | + | 1 | 16 | 9_26 | 8 | 834 | PABPC1 and PABC4 |
| Hgene | NFX1 | chr9:33290595 | chr9:33029883 | ENST00000379521 | + | 1 | 21 | 9_26 | 8 | 1025 | PABPC1 and PABC4 |
| Hgene | NFX1 | chr9:33290595 | chr9:33029883 | ENST00000379540 | + | 1 | 24 | 9_26 | 8 | 1121 | PABPC1 and PABC4 |
| - Retained PPIs, but lost function due to frame-shift fusion. |
| Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Interaction lost with |
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RelatedDrugs for NFX1_DNAJA1 |
| Drugs targeting genes involved in this fusion gene. (DrugBank Version 5.1.0 2018-04-02) |
| Partner | Gene | UniProtAcc | DrugBank ID | Drug name | Drug activity | Drug type | Drug status |
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RelatedDiseases for NFX1_DNAJA1 |
| Diseases associated with fusion partners. (DisGeNet 4.0) |
| Partner | Gene | Disease ID | Disease name | # pubmeds | Source |
| Tgene | DNAJA1 | C0026636 | Mouth Diseases | 1 | CTD_human |
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