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Fusion gene ID: 23751 |
FusionGeneSummary for NCSTN_ATP1A4 |
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Fusion gene information | Fusion gene name: NCSTN_ATP1A4 | Fusion gene ID: 23751 | Hgene | Tgene | Gene symbol | NCSTN | ATP1A4 | Gene ID | 23385 | 480 |
Gene name | nicastrin | ATPase Na+/K+ transporting subunit alpha 4 | |
Synonyms | ATAG1874 | ATP1A1|ATP1AL2 | |
Cytomap | 1q23.2 | 1q23.2 | |
Type of gene | protein-coding | protein-coding | |
Description | nicastrinanterior pharynx-defective 2 | sodium/potassium-transporting ATPase subunit alpha-4ATPase, Na+/K+ transporting, alpha 4 polypeptideATPase, Na+/K+ transporting, alpha polypeptide-like 2Na(+)/K(+) ATPase alpha-4 subunitNa+/K+ ATPase 4Na+/K+ ATPase, alpha-D polypeptideNa,K-ATPase su | |
Modification date | 20180523 | 20180523 | |
UniProtAcc | Q92542 | Q13733 | |
Ensembl transtripts involved in fusion gene | ENST00000294785, ENST00000368063, ENST00000535857, ENST00000392212, ENST00000459963, ENST00000368065, | ENST00000368081, ENST00000418334, ENST00000470705, | |
Fusion gene scores | * DoF score | 7 X 7 X 4=196 | 2 X 2 X 2=8 |
# samples | 8 | 3 | |
** MAII score | log2(8/196*10)=-1.29278174922785 possibly effective Gene in Pan-Cancer Fusion Genes (peGinPCFGs). DoF>8 and MAII<0 | log2(3/8*10)=1.90689059560852 | |
Context | PubMed: NCSTN [Title/Abstract] AND ATP1A4 [Title/Abstract] AND fusion [Title/Abstract] | ||
Functional or gene categories assigned by FusionGDB annotation | Kinase involved fusion gene, inframe and retained kinase domain. |
* DoF score (Degree of Frequency) = # partners X # break points X # cancer types ** MAII score (Major Active Isofusion Index) = log2(# samples/DoF score*10) |
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Partner | Gene | GO ID | GO term | PubMed ID |
Hgene | NCSTN | GO:0006509 | membrane protein ectodomain proteolysis | 15274632 |
Hgene | NCSTN | GO:0016485 | protein processing | 15274632 |
Hgene | NCSTN | GO:0042982 | amyloid precursor protein metabolic process | 25043039|26280335 |
Hgene | NCSTN | GO:0043085 | positive regulation of catalytic activity | 15274632 |
Tgene | ATP1A4 | GO:0030317 | flagellated sperm motility | 12112599 |
Tgene | ATP1A4 | GO:0030641 | regulation of cellular pH | 12112599 |
![]() (ChiTars (NAR, 2018), tumorfusions (NAR, 2018), Gao et al. (Cell, 2018)) * All genome coordinats were lifted-over on hg19. * Click on the break point to see the gene structure around the break point region using the UCSC Genome Browser. |
Data type | Source | Cancer type | Sample | Hgene | Hchr | Hbp | Hstrand | Tgene | Tchr | Tbp | Tstrand |
TCGA | RV | BRCA | TCGA-BH-A1FD-01A | NCSTN | chr1 | 160314616 | + | ATP1A4 | chr1 | 160145882 | + |
* LD: Li Ding group's fusion gene list RV: Roel Verhaak group's fusion gene list ChiTaRs fusion database |
![]() * Click on the break point to see the gene structure around the break point region using the UCSC Genome Browser. |
ORF | Henst | Tenst | Hgene | Hchr | Hbp | Hstrand | Tgene | Tchr | Tbp | Tstrand |
In-frame | ENST00000294785 | ENST00000368081 | NCSTN | chr1 | 160314616 | + | ATP1A4 | chr1 | 160145882 | + |
5CDS-3UTR | ENST00000294785 | ENST00000418334 | NCSTN | chr1 | 160314616 | + | ATP1A4 | chr1 | 160145882 | + |
5CDS-intron | ENST00000294785 | ENST00000470705 | NCSTN | chr1 | 160314616 | + | ATP1A4 | chr1 | 160145882 | + |
In-frame | ENST00000368063 | ENST00000368081 | NCSTN | chr1 | 160314616 | + | ATP1A4 | chr1 | 160145882 | + |
5CDS-3UTR | ENST00000368063 | ENST00000418334 | NCSTN | chr1 | 160314616 | + | ATP1A4 | chr1 | 160145882 | + |
5CDS-intron | ENST00000368063 | ENST00000470705 | NCSTN | chr1 | 160314616 | + | ATP1A4 | chr1 | 160145882 | + |
In-frame | ENST00000535857 | ENST00000368081 | NCSTN | chr1 | 160314616 | + | ATP1A4 | chr1 | 160145882 | + |
5CDS-3UTR | ENST00000535857 | ENST00000418334 | NCSTN | chr1 | 160314616 | + | ATP1A4 | chr1 | 160145882 | + |
5CDS-intron | ENST00000535857 | ENST00000470705 | NCSTN | chr1 | 160314616 | + | ATP1A4 | chr1 | 160145882 | + |
In-frame | ENST00000392212 | ENST00000368081 | NCSTN | chr1 | 160314616 | + | ATP1A4 | chr1 | 160145882 | + |
5CDS-3UTR | ENST00000392212 | ENST00000418334 | NCSTN | chr1 | 160314616 | + | ATP1A4 | chr1 | 160145882 | + |
5CDS-intron | ENST00000392212 | ENST00000470705 | NCSTN | chr1 | 160314616 | + | ATP1A4 | chr1 | 160145882 | + |
intron-3CDS | ENST00000459963 | ENST00000368081 | NCSTN | chr1 | 160314616 | + | ATP1A4 | chr1 | 160145882 | + |
intron-3UTR | ENST00000459963 | ENST00000418334 | NCSTN | chr1 | 160314616 | + | ATP1A4 | chr1 | 160145882 | + |
intron-intron | ENST00000459963 | ENST00000470705 | NCSTN | chr1 | 160314616 | + | ATP1A4 | chr1 | 160145882 | + |
intron-3CDS | ENST00000368065 | ENST00000368081 | NCSTN | chr1 | 160314616 | + | ATP1A4 | chr1 | 160145882 | + |
intron-3UTR | ENST00000368065 | ENST00000418334 | NCSTN | chr1 | 160314616 | + | ATP1A4 | chr1 | 160145882 | + |
intron-intron | ENST00000368065 | ENST00000470705 | NCSTN | chr1 | 160314616 | + | ATP1A4 | chr1 | 160145882 | + |
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FusionProtFeatures for NCSTN_ATP1A4 |
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Hgene | Tgene |
NCSTN | ATP1A4 |
Essential subunit of the gamma-secretase complex, anendoprotease complex that catalyzes the intramembrane cleavage ofintegral membrane proteins such as Notch receptors and APP(amyloid-beta precursor protein) (PubMed:10993067,PubMed:12679784, PubMed:25043039, PubMed:26280335). The gamma-secretase complex plays a role in Notch and Wnt signaling cascadesand regulation of downstream processes via its role in processingkey regulatory proteins, and by regulating cytosolic CTNNB1levels. {ECO:0000269|PubMed:10993067, ECO:0000269|PubMed:12679784,ECO:0000269|PubMed:25043039, ECO:0000269|PubMed:26280335}. | This is the catalytic component of the active enzyme,which catalyzes the hydrolysis of ATP coupled with the exchange ofsodium and potassium ions across the plasma membrane. This actioncreates the electrochemical gradient of sodium and potassium ions,providing the energy for active transport of various nutrients.Plays a role in sperm motility. |
![]() * Minus value of BPloci means that the break pointn is located before the CDS. |
- In-frame and retained protein feature among the 13 regional features. |
Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Protein feature | Protein feature note |
Tgene | >ATP1A4 | chr1:160314616 | chr1:160145882 | ENST00000368081 | + | 14 | 22 | 1013_1029 | 770 | 1030 | Topological domain | Cytoplasmic |
Tgene | >ATP1A4 | chr1:160314616 | chr1:160145882 | ENST00000368081 | + | 14 | 22 | 799_808 | 770 | 1030 | Topological domain | Extracellular |
Tgene | >ATP1A4 | chr1:160314616 | chr1:160145882 | ENST00000368081 | + | 14 | 22 | 830_849 | 770 | 1030 | Topological domain | Cytoplasmic |
Tgene | >ATP1A4 | chr1:160314616 | chr1:160145882 | ENST00000368081 | + | 14 | 22 | 873_924 | 770 | 1030 | Topological domain | Extracellular |
Tgene | >ATP1A4 | chr1:160314616 | chr1:160145882 | ENST00000368081 | + | 14 | 22 | 945_957 | 770 | 1030 | Topological domain | Cytoplasmic |
Tgene | >ATP1A4 | chr1:160314616 | chr1:160145882 | ENST00000368081 | + | 14 | 22 | 977_991 | 770 | 1030 | Topological domain | Extracellular |
Tgene | >ATP1A4 | chr1:160314616 | chr1:160145882 | ENST00000470705 | + | 0 | 5 | 1013_1029 | -37 | 166 | Topological domain | Cytoplasmic |
Tgene | >ATP1A4 | chr1:160314616 | chr1:160145882 | ENST00000470705 | + | 0 | 5 | 117_139 | -37 | 166 | Topological domain | Extracellular |
Tgene | >ATP1A4 | chr1:160314616 | chr1:160145882 | ENST00000470705 | + | 0 | 5 | 161_296 | -37 | 166 | Topological domain | Cytoplasmic |
Tgene | >ATP1A4 | chr1:160314616 | chr1:160145882 | ENST00000470705 | + | 0 | 5 | 1_95 | -37 | 166 | Topological domain | Cytoplasmic |
Tgene | >ATP1A4 | chr1:160314616 | chr1:160145882 | ENST00000470705 | + | 0 | 5 | 317_328 | -37 | 166 | Topological domain | Extracellular |
Tgene | >ATP1A4 | chr1:160314616 | chr1:160145882 | ENST00000470705 | + | 0 | 5 | 347_778 | -37 | 166 | Topological domain | Cytoplasmic |
Tgene | >ATP1A4 | chr1:160314616 | chr1:160145882 | ENST00000470705 | + | 0 | 5 | 799_808 | -37 | 166 | Topological domain | Extracellular |
Tgene | >ATP1A4 | chr1:160314616 | chr1:160145882 | ENST00000470705 | + | 0 | 5 | 830_849 | -37 | 166 | Topological domain | Cytoplasmic |
Tgene | >ATP1A4 | chr1:160314616 | chr1:160145882 | ENST00000470705 | + | 0 | 5 | 873_924 | -37 | 166 | Topological domain | Extracellular |
Tgene | >ATP1A4 | chr1:160314616 | chr1:160145882 | ENST00000470705 | + | 0 | 5 | 945_957 | -37 | 166 | Topological domain | Cytoplasmic |
Tgene | >ATP1A4 | chr1:160314616 | chr1:160145882 | ENST00000470705 | + | 0 | 5 | 977_991 | -37 | 166 | Topological domain | Extracellular |
Tgene | >ATP1A4 | chr1:160314616 | chr1:160145882 | ENST00000368081 | + | 14 | 22 | 779_798 | 770 | 1030 | Transmembrane | Helical |
Tgene | >ATP1A4 | chr1:160314616 | chr1:160145882 | ENST00000368081 | + | 14 | 22 | 809_829 | 770 | 1030 | Transmembrane | Helical |
Tgene | >ATP1A4 | chr1:160314616 | chr1:160145882 | ENST00000368081 | + | 14 | 22 | 850_872 | 770 | 1030 | Transmembrane | Helical |
Tgene | >ATP1A4 | chr1:160314616 | chr1:160145882 | ENST00000368081 | + | 14 | 22 | 925_944 | 770 | 1030 | Transmembrane | Helical |
Tgene | >ATP1A4 | chr1:160314616 | chr1:160145882 | ENST00000368081 | + | 14 | 22 | 958_976 | 770 | 1030 | Transmembrane | Helical |
Tgene | >ATP1A4 | chr1:160314616 | chr1:160145882 | ENST00000368081 | + | 14 | 22 | 992_1012 | 770 | 1030 | Transmembrane | Helical |
Tgene | >ATP1A4 | chr1:160314616 | chr1:160145882 | ENST00000470705 | + | 0 | 5 | 140_160 | -37 | 166 | Transmembrane | Helical |
Tgene | >ATP1A4 | chr1:160314616 | chr1:160145882 | ENST00000470705 | + | 0 | 5 | 297_316 | -37 | 166 | Transmembrane | Helical |
Tgene | >ATP1A4 | chr1:160314616 | chr1:160145882 | ENST00000470705 | + | 0 | 5 | 329_346 | -37 | 166 | Transmembrane | Helical |
Tgene | >ATP1A4 | chr1:160314616 | chr1:160145882 | ENST00000470705 | + | 0 | 5 | 779_798 | -37 | 166 | Transmembrane | Helical |
Tgene | >ATP1A4 | chr1:160314616 | chr1:160145882 | ENST00000470705 | + | 0 | 5 | 809_829 | -37 | 166 | Transmembrane | Helical |
Tgene | >ATP1A4 | chr1:160314616 | chr1:160145882 | ENST00000470705 | + | 0 | 5 | 850_872 | -37 | 166 | Transmembrane | Helical |
Tgene | >ATP1A4 | chr1:160314616 | chr1:160145882 | ENST00000470705 | + | 0 | 5 | 925_944 | -37 | 166 | Transmembrane | Helical |
Tgene | >ATP1A4 | chr1:160314616 | chr1:160145882 | ENST00000470705 | + | 0 | 5 | 958_976 | -37 | 166 | Transmembrane | Helical |
Tgene | >ATP1A4 | chr1:160314616 | chr1:160145882 | ENST00000470705 | + | 0 | 5 | 96_116 | -37 | 166 | Transmembrane | Helical |
Tgene | >ATP1A4 | chr1:160314616 | chr1:160145882 | ENST00000470705 | + | 0 | 5 | 992_1012 | -37 | 166 | Transmembrane | Helical |
- In-frame and not-retained protein feature among the 13 regional features. |
Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Protein feature | Protein feature note |
Hgene | >NCSTN | chr1:160314616 | chr1:160145882 | ENST00000294785 | + | 2 | 17 | 34_669 | 63 | 710 | Topological domain | Extracellular |
Hgene | >NCSTN | chr1:160314616 | chr1:160145882 | ENST00000294785 | + | 2 | 17 | 691_709 | 63 | 710 | Topological domain | Cytoplasmic |
Hgene | >NCSTN | chr1:160314616 | chr1:160145882 | ENST00000368063 | + | 3 | 18 | 34_669 | 43 | 690 | Topological domain | Extracellular |
Hgene | >NCSTN | chr1:160314616 | chr1:160145882 | ENST00000368063 | + | 3 | 18 | 691_709 | 43 | 690 | Topological domain | Cytoplasmic |
Hgene | >NCSTN | chr1:160314616 | chr1:160145882 | ENST00000392212 | + | 2 | 17 | 34_669 | 43 | 690 | Topological domain | Extracellular |
Hgene | >NCSTN | chr1:160314616 | chr1:160145882 | ENST00000392212 | + | 2 | 17 | 691_709 | 43 | 690 | Topological domain | Cytoplasmic |
Hgene | >NCSTN | chr1:160314616 | chr1:160145882 | ENST00000294785 | + | 2 | 17 | 670_690 | 63 | 710 | Transmembrane | Helical |
Hgene | >NCSTN | chr1:160314616 | chr1:160145882 | ENST00000368063 | + | 3 | 18 | 670_690 | 43 | 690 | Transmembrane | Helical |
Hgene | >NCSTN | chr1:160314616 | chr1:160145882 | ENST00000392212 | + | 2 | 17 | 670_690 | 43 | 690 | Transmembrane | Helical |
Tgene | ATP1A4 | chr1:160314616 | chr1:160145882 | ENST00000368081 | + | 14 | 22 | 117_139 | 770 | 1030 | Topological domain | Extracellular |
Tgene | ATP1A4 | chr1:160314616 | chr1:160145882 | ENST00000368081 | + | 14 | 22 | 161_296 | 770 | 1030 | Topological domain | Cytoplasmic |
Tgene | ATP1A4 | chr1:160314616 | chr1:160145882 | ENST00000368081 | + | 14 | 22 | 1_95 | 770 | 1030 | Topological domain | Cytoplasmic |
Tgene | ATP1A4 | chr1:160314616 | chr1:160145882 | ENST00000368081 | + | 14 | 22 | 317_328 | 770 | 1030 | Topological domain | Extracellular |
Tgene | ATP1A4 | chr1:160314616 | chr1:160145882 | ENST00000368081 | + | 14 | 22 | 347_778 | 770 | 1030 | Topological domain | Cytoplasmic |
Tgene | ATP1A4 | chr1:160314616 | chr1:160145882 | ENST00000368081 | + | 14 | 22 | 140_160 | 770 | 1030 | Transmembrane | Helical |
Tgene | ATP1A4 | chr1:160314616 | chr1:160145882 | ENST00000368081 | + | 14 | 22 | 297_316 | 770 | 1030 | Transmembrane | Helical |
Tgene | ATP1A4 | chr1:160314616 | chr1:160145882 | ENST00000368081 | + | 14 | 22 | 329_346 | 770 | 1030 | Transmembrane | Helical |
Tgene | ATP1A4 | chr1:160314616 | chr1:160145882 | ENST00000368081 | + | 14 | 22 | 96_116 | 770 | 1030 | Transmembrane | Helical |
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FusionGeneSequence for NCSTN_ATP1A4 |
![]() (nt: nucleotides, aa: amino acids) |
* Fusion amino acid sequences. |
>In-frame_NCSTN_ENST00000294785_chr1_160314616_+_ATP1A4_ENST00000368081_chr1_160145882_+_323aa MATAGGGSGADPGSRGLLRLLSFCVLLAGLCRGNSVERKIYIPLNKTAPCVRLLNATHQIGCQCRLIFDNLKKSIMYTLTSNIPEITPFL MFIILGIPLPLGTITILCIDLGTDMVPAISLAYESAESDIMKRLPRNPKTDNLVNHRLIGMAYGQIGMIQALAGFFTYFVILAENGFRPV DLLGIRLHWEDKYLNDLEDSYGQQWTYEQRKVVEFTCQTAFFVTIVVVQWADLIISKTRRNSLFQQGMRNKVLIFGILEETLLAAFLSYT >In-frame_NCSTN_ENST00000368063_chr1_160314616_+_ATP1A4_ENST00000368081_chr1_160145882_+_303aa MDFNLILESLCRGNSVERKIYIPLNKTAPCVRLLNATHQIGCQCRLIFDNLKKSIMYTLTSNIPEITPFLMFIILGIPLPLGTITILCID LGTDMVPAISLAYESAESDIMKRLPRNPKTDNLVNHRLIGMAYGQIGMIQALAGFFTYFVILAENGFRPVDLLGIRLHWEDKYLNDLEDS YGQQWTYEQRKVVEFTCQTAFFVTIVVVQWADLIISKTRRNSLFQQGMRNKVLIFGILEETLLAAFLSYTPGMDVALRMYPLKITWWLCA >In-frame_NCSTN_ENST00000535857_chr1_160314616_+_ATP1A4_ENST00000368081_chr1_160145882_+_323aa MATAGGGSGADPGSRGLLRLLSFCVLLAGLCRGNSVERKIYIPLNKTAPCVRLLNATHQIGCQCRLIFDNLKKSIMYTLTSNIPEITPFL MFIILGIPLPLGTITILCIDLGTDMVPAISLAYESAESDIMKRLPRNPKTDNLVNHRLIGMAYGQIGMIQALAGFFTYFVILAENGFRPV DLLGIRLHWEDKYLNDLEDSYGQQWTYEQRKVVEFTCQTAFFVTIVVVQWADLIISKTRRNSLFQQGMRNKVLIFGILEETLLAAFLSYT >In-frame_NCSTN_ENST00000392212_chr1_160314616_+_ATP1A4_ENST00000368081_chr1_160145882_+_303aa MDFNLILESLCRGNSVERKIYIPLNKTAPCVRLLNATHQIGCQCRLIFDNLKKSIMYTLTSNIPEITPFLMFIILGIPLPLGTITILCID LGTDMVPAISLAYESAESDIMKRLPRNPKTDNLVNHRLIGMAYGQIGMIQALAGFFTYFVILAENGFRPVDLLGIRLHWEDKYLNDLEDS YGQQWTYEQRKVVEFTCQTAFFVTIVVVQWADLIISKTRRNSLFQQGMRNKVLIFGILEETLLAAFLSYTPGMDVALRMYPLKITWWLCA |
* Fusion transcript sequences (only coding sequence (CDS) region). |
>In-frame_NCSTN_ENST00000294785_chr1_160314616_+_ATP1A4_ENST00000368081_chr1_160145882_+_969nt ATGGCTACGGCAGGGGGTGGCTCTGGGGCTGACCCGGGAAGTCGGGGTCTCCTTCGCCTTCTGTCTTTCTGCGTCCTACTAGCAGGTTTG TGCAGGGGAAACTCAGTGGAGAGGAAGATATATATCCCCTTAAATAAAACAGCTCCCTGTGTTCGCCTGCTCAACGCCACTCATCAGATT GGCTGCCAGTGCCGCCTGATCTTTGACAACCTGAAGAAATCCATCATGTACACCCTGACCAGCAACATCCCCGAGATCACGCCCTTCCTG ATGTTCATCATCCTCGGTATACCCCTGCCTCTGGGAACCATAACCATCCTCTGCATTGATCTCGGCACTGACATGGTCCCTGCCATCTCC TTGGCTTATGAGTCAGCTGAAAGCGACATCATGAAGAGGCTTCCAAGGAACCCAAAGACGGATAATCTGGTGAACCACCGTCTCATTGGC ATGGCCTATGGACAGATTGGGATGATCCAGGCTCTGGCTGGATTCTTTACCTACTTTGTAATCCTGGCTGAGAATGGTTTTAGGCCTGTT GATCTGCTGGGCATCCGCCTCCACTGGGAAGATAAATACTTGAATGACCTGGAGGACAGCTACGGACAGCAGTGGACCTATGAGCAACGA AAAGTTGTGGAGTTCACATGCCAAACGGCCTTTTTTGTCACCATCGTGGTTGTGCAGTGGGCGGATCTCATCATCTCCAAGACTCGCCGC AACTCACTTTTCCAGCAGGGCATGAGAAACAAAGTCTTAATATTTGGGATCCTGGAGGAGACACTCTTGGCTGCATTTCTGTCCTACACT CCAGGCATGGACGTGGCCCTGCGAATGTACCCACTCAAGATAACCTGGTGGCTCTGTGCCATTCCCTACAGTATTCTCATCTTCGTCTAT >In-frame_NCSTN_ENST00000368063_chr1_160314616_+_ATP1A4_ENST00000368081_chr1_160145882_+_909nt ATGGACTTTAATCTCATTTTAGAAAGTTTGTGCAGGGGAAACTCAGTGGAGAGGAAGATATATATCCCCTTAAATAAAACAGCTCCCTGT GTTCGCCTGCTCAACGCCACTCATCAGATTGGCTGCCAGTGCCGCCTGATCTTTGACAACCTGAAGAAATCCATCATGTACACCCTGACC AGCAACATCCCCGAGATCACGCCCTTCCTGATGTTCATCATCCTCGGTATACCCCTGCCTCTGGGAACCATAACCATCCTCTGCATTGAT CTCGGCACTGACATGGTCCCTGCCATCTCCTTGGCTTATGAGTCAGCTGAAAGCGACATCATGAAGAGGCTTCCAAGGAACCCAAAGACG GATAATCTGGTGAACCACCGTCTCATTGGCATGGCCTATGGACAGATTGGGATGATCCAGGCTCTGGCTGGATTCTTTACCTACTTTGTA ATCCTGGCTGAGAATGGTTTTAGGCCTGTTGATCTGCTGGGCATCCGCCTCCACTGGGAAGATAAATACTTGAATGACCTGGAGGACAGC TACGGACAGCAGTGGACCTATGAGCAACGAAAAGTTGTGGAGTTCACATGCCAAACGGCCTTTTTTGTCACCATCGTGGTTGTGCAGTGG GCGGATCTCATCATCTCCAAGACTCGCCGCAACTCACTTTTCCAGCAGGGCATGAGAAACAAAGTCTTAATATTTGGGATCCTGGAGGAG ACACTCTTGGCTGCATTTCTGTCCTACACTCCAGGCATGGACGTGGCCCTGCGAATGTACCCACTCAAGATAACCTGGTGGCTCTGTGCC ATTCCCTACAGTATTCTCATCTTCGTCTATGATGAAATCAGAAAACTCCTCATCCGTCAGCACCCGGATGGCTGGGTGGAAAGGGAGACG >In-frame_NCSTN_ENST00000535857_chr1_160314616_+_ATP1A4_ENST00000368081_chr1_160145882_+_969nt ATGGCTACGGCAGGGGGTGGCTCTGGGGCTGACCCGGGAAGTCGGGGTCTCCTTCGCCTTCTGTCTTTCTGCGTCCTACTAGCAGGTTTG TGCAGGGGAAACTCAGTGGAGAGGAAGATATATATCCCCTTAAATAAAACAGCTCCCTGTGTTCGCCTGCTCAACGCCACTCATCAGATT GGCTGCCAGTGCCGCCTGATCTTTGACAACCTGAAGAAATCCATCATGTACACCCTGACCAGCAACATCCCCGAGATCACGCCCTTCCTG ATGTTCATCATCCTCGGTATACCCCTGCCTCTGGGAACCATAACCATCCTCTGCATTGATCTCGGCACTGACATGGTCCCTGCCATCTCC TTGGCTTATGAGTCAGCTGAAAGCGACATCATGAAGAGGCTTCCAAGGAACCCAAAGACGGATAATCTGGTGAACCACCGTCTCATTGGC ATGGCCTATGGACAGATTGGGATGATCCAGGCTCTGGCTGGATTCTTTACCTACTTTGTAATCCTGGCTGAGAATGGTTTTAGGCCTGTT GATCTGCTGGGCATCCGCCTCCACTGGGAAGATAAATACTTGAATGACCTGGAGGACAGCTACGGACAGCAGTGGACCTATGAGCAACGA AAAGTTGTGGAGTTCACATGCCAAACGGCCTTTTTTGTCACCATCGTGGTTGTGCAGTGGGCGGATCTCATCATCTCCAAGACTCGCCGC AACTCACTTTTCCAGCAGGGCATGAGAAACAAAGTCTTAATATTTGGGATCCTGGAGGAGACACTCTTGGCTGCATTTCTGTCCTACACT CCAGGCATGGACGTGGCCCTGCGAATGTACCCACTCAAGATAACCTGGTGGCTCTGTGCCATTCCCTACAGTATTCTCATCTTCGTCTAT >In-frame_NCSTN_ENST00000392212_chr1_160314616_+_ATP1A4_ENST00000368081_chr1_160145882_+_909nt ATGGACTTTAATCTCATTTTAGAAAGTTTGTGCAGGGGAAACTCAGTGGAGAGGAAGATATATATCCCCTTAAATAAAACAGCTCCCTGT GTTCGCCTGCTCAACGCCACTCATCAGATTGGCTGCCAGTGCCGCCTGATCTTTGACAACCTGAAGAAATCCATCATGTACACCCTGACC AGCAACATCCCCGAGATCACGCCCTTCCTGATGTTCATCATCCTCGGTATACCCCTGCCTCTGGGAACCATAACCATCCTCTGCATTGAT CTCGGCACTGACATGGTCCCTGCCATCTCCTTGGCTTATGAGTCAGCTGAAAGCGACATCATGAAGAGGCTTCCAAGGAACCCAAAGACG GATAATCTGGTGAACCACCGTCTCATTGGCATGGCCTATGGACAGATTGGGATGATCCAGGCTCTGGCTGGATTCTTTACCTACTTTGTA ATCCTGGCTGAGAATGGTTTTAGGCCTGTTGATCTGCTGGGCATCCGCCTCCACTGGGAAGATAAATACTTGAATGACCTGGAGGACAGC TACGGACAGCAGTGGACCTATGAGCAACGAAAAGTTGTGGAGTTCACATGCCAAACGGCCTTTTTTGTCACCATCGTGGTTGTGCAGTGG GCGGATCTCATCATCTCCAAGACTCGCCGCAACTCACTTTTCCAGCAGGGCATGAGAAACAAAGTCTTAATATTTGGGATCCTGGAGGAG ACACTCTTGGCTGCATTTCTGTCCTACACTCCAGGCATGGACGTGGCCCTGCGAATGTACCCACTCAAGATAACCTGGTGGCTCTGTGCC ATTCCCTACAGTATTCTCATCTTCGTCTATGATGAAATCAGAAAACTCCTCATCCGTCAGCACCCGGATGGCTGGGTGGAAAGGGAGACG |
* Fusion transcript sequences (Full-length transcript). |
>In-frame_NCSTN_ENST00000294785_chr1_160314616_+_ATP1A4_ENST00000368081_chr1_160145882_+_1372nt GCGCCTGGAAACACGAACTTCCGGTCTCTTAGGCTCCGGGCCACAGAGACGGTGTCAGTGGTAGCCTAGAGAGGCCGCTAACAGACAGGA GCCGAACGGGGGCTTCCGCTCAGCAGAGAGGCAAGATGGCTACGGCAGGGGGTGGCTCTGGGGCTGACCCGGGAAGTCGGGGTCTCCTTC GCCTTCTGTCTTTCTGCGTCCTACTAGCAGGTTTGTGCAGGGGAAACTCAGTGGAGAGGAAGATATATATCCCCTTAAATAAAACAGCTC CCTGTGTTCGCCTGCTCAACGCCACTCATCAGATTGGCTGCCAGTGCCGCCTGATCTTTGACAACCTGAAGAAATCCATCATGTACACCC TGACCAGCAACATCCCCGAGATCACGCCCTTCCTGATGTTCATCATCCTCGGTATACCCCTGCCTCTGGGAACCATAACCATCCTCTGCA TTGATCTCGGCACTGACATGGTCCCTGCCATCTCCTTGGCTTATGAGTCAGCTGAAAGCGACATCATGAAGAGGCTTCCAAGGAACCCAA AGACGGATAATCTGGTGAACCACCGTCTCATTGGCATGGCCTATGGACAGATTGGGATGATCCAGGCTCTGGCTGGATTCTTTACCTACT TTGTAATCCTGGCTGAGAATGGTTTTAGGCCTGTTGATCTGCTGGGCATCCGCCTCCACTGGGAAGATAAATACTTGAATGACCTGGAGG ACAGCTACGGACAGCAGTGGACCTATGAGCAACGAAAAGTTGTGGAGTTCACATGCCAAACGGCCTTTTTTGTCACCATCGTGGTTGTGC AGTGGGCGGATCTCATCATCTCCAAGACTCGCCGCAACTCACTTTTCCAGCAGGGCATGAGAAACAAAGTCTTAATATTTGGGATCCTGG AGGAGACACTCTTGGCTGCATTTCTGTCCTACACTCCAGGCATGGACGTGGCCCTGCGAATGTACCCACTCAAGATAACCTGGTGGCTCT GTGCCATTCCCTACAGTATTCTCATCTTCGTCTATGATGAAATCAGAAAACTCCTCATCCGTCAGCACCCGGATGGCTGGGTGGAAAGGG AGACGTACTACTAAACTCAGCAGATGAAGAGCTTCATGTGACACAGGGGTGTTGTGAGAGCTGGGATGGGGCCAGAGATTATAAGTTTGA CACAACATCTGAGACACTAGGATGAATTATCTTGGATGAGAAAGATGGGCAATCCTGGGCTGGCTTGAGGGAATCATGGGCAGAGGATGA GGTGGGCTGAAGGGAAGCCCAGCCTGCATCTAGCTGGAGCCCCGCAGGGAGGGGCATGGTCCTGCTGAATCCCGTAGCCAGTCTAGACAG >In-frame_NCSTN_ENST00000368063_chr1_160314616_+_ATP1A4_ENST00000368081_chr1_160145882_+_1467nt AGAGACGGTGTCAGTGGTAGCCTAGAGAGGCCGCTAACAGACAGGAGCCGAACGGGGGCTTCCGCTCAGCAGAGAGGCAAGATGGCTACG GCAGGGGGTGGCTCTGGGGCTGACCCGGGAAGTCGGGGTCTCCTTCGCCTTCTGTCTTTCTGCGTCCTACTAGCAGTGTCACTGTCAATG GCGCTACATGGACTTTGTAATAACCCTTTGAGGCACATAGCTGGGTGCCATGTAGAACATGTATCTGTTACGATAAGTGTGTGCCCAAGA AATCAGAAGAATGGACTTTAATCTCATTTTAGAAAGTTTGTGCAGGGGAAACTCAGTGGAGAGGAAGATATATATCCCCTTAAATAAAAC AGCTCCCTGTGTTCGCCTGCTCAACGCCACTCATCAGATTGGCTGCCAGTGCCGCCTGATCTTTGACAACCTGAAGAAATCCATCATGTA CACCCTGACCAGCAACATCCCCGAGATCACGCCCTTCCTGATGTTCATCATCCTCGGTATACCCCTGCCTCTGGGAACCATAACCATCCT CTGCATTGATCTCGGCACTGACATGGTCCCTGCCATCTCCTTGGCTTATGAGTCAGCTGAAAGCGACATCATGAAGAGGCTTCCAAGGAA CCCAAAGACGGATAATCTGGTGAACCACCGTCTCATTGGCATGGCCTATGGACAGATTGGGATGATCCAGGCTCTGGCTGGATTCTTTAC CTACTTTGTAATCCTGGCTGAGAATGGTTTTAGGCCTGTTGATCTGCTGGGCATCCGCCTCCACTGGGAAGATAAATACTTGAATGACCT GGAGGACAGCTACGGACAGCAGTGGACCTATGAGCAACGAAAAGTTGTGGAGTTCACATGCCAAACGGCCTTTTTTGTCACCATCGTGGT TGTGCAGTGGGCGGATCTCATCATCTCCAAGACTCGCCGCAACTCACTTTTCCAGCAGGGCATGAGAAACAAAGTCTTAATATTTGGGAT CCTGGAGGAGACACTCTTGGCTGCATTTCTGTCCTACACTCCAGGCATGGACGTGGCCCTGCGAATGTACCCACTCAAGATAACCTGGTG GCTCTGTGCCATTCCCTACAGTATTCTCATCTTCGTCTATGATGAAATCAGAAAACTCCTCATCCGTCAGCACCCGGATGGCTGGGTGGA AAGGGAGACGTACTACTAAACTCAGCAGATGAAGAGCTTCATGTGACACAGGGGTGTTGTGAGAGCTGGGATGGGGCCAGAGATTATAAG TTTGACACAACATCTGAGACACTAGGATGAATTATCTTGGATGAGAAAGATGGGCAATCCTGGGCTGGCTTGAGGGAATCATGGGCAGAG GATGAGGTGGGCTGAAGGGAAGCCCAGCCTGCATCTAGCTGGAGCCCCGCAGGGAGGGGCATGGTCCTGCTGAATCCCGTAGCCAGTCTA >In-frame_NCSTN_ENST00000535857_chr1_160314616_+_ATP1A4_ENST00000368081_chr1_160145882_+_1258nt AGAGAGGCAAGATGGCTACGGCAGGGGGTGGCTCTGGGGCTGACCCGGGAAGTCGGGGTCTCCTTCGCCTTCTGTCTTTCTGCGTCCTAC TAGCAGGTTTGTGCAGGGGAAACTCAGTGGAGAGGAAGATATATATCCCCTTAAATAAAACAGCTCCCTGTGTTCGCCTGCTCAACGCCA CTCATCAGATTGGCTGCCAGTGCCGCCTGATCTTTGACAACCTGAAGAAATCCATCATGTACACCCTGACCAGCAACATCCCCGAGATCA CGCCCTTCCTGATGTTCATCATCCTCGGTATACCCCTGCCTCTGGGAACCATAACCATCCTCTGCATTGATCTCGGCACTGACATGGTCC CTGCCATCTCCTTGGCTTATGAGTCAGCTGAAAGCGACATCATGAAGAGGCTTCCAAGGAACCCAAAGACGGATAATCTGGTGAACCACC GTCTCATTGGCATGGCCTATGGACAGATTGGGATGATCCAGGCTCTGGCTGGATTCTTTACCTACTTTGTAATCCTGGCTGAGAATGGTT TTAGGCCTGTTGATCTGCTGGGCATCCGCCTCCACTGGGAAGATAAATACTTGAATGACCTGGAGGACAGCTACGGACAGCAGTGGACCT ATGAGCAACGAAAAGTTGTGGAGTTCACATGCCAAACGGCCTTTTTTGTCACCATCGTGGTTGTGCAGTGGGCGGATCTCATCATCTCCA AGACTCGCCGCAACTCACTTTTCCAGCAGGGCATGAGAAACAAAGTCTTAATATTTGGGATCCTGGAGGAGACACTCTTGGCTGCATTTC TGTCCTACACTCCAGGCATGGACGTGGCCCTGCGAATGTACCCACTCAAGATAACCTGGTGGCTCTGTGCCATTCCCTACAGTATTCTCA TCTTCGTCTATGATGAAATCAGAAAACTCCTCATCCGTCAGCACCCGGATGGCTGGGTGGAAAGGGAGACGTACTACTAAACTCAGCAGA TGAAGAGCTTCATGTGACACAGGGGTGTTGTGAGAGCTGGGATGGGGCCAGAGATTATAAGTTTGACACAACATCTGAGACACTAGGATG AATTATCTTGGATGAGAAAGATGGGCAATCCTGGGCTGGCTTGAGGGAATCATGGGCAGAGGATGAGGTGGGCTGAAGGGAAGCCCAGCC >In-frame_NCSTN_ENST00000392212_chr1_160314616_+_ATP1A4_ENST00000368081_chr1_160145882_+_1187nt ATGGACTTTAATCTCATTTTAGAAAGTTTGTGCAGGGGAAACTCAGTGGAGAGGAAGATATATATCCCCTTAAATAAAACAGCTCCCTGT GTTCGCCTGCTCAACGCCACTCATCAGATTGGCTGCCAGTGCCGCCTGATCTTTGACAACCTGAAGAAATCCATCATGTACACCCTGACC AGCAACATCCCCGAGATCACGCCCTTCCTGATGTTCATCATCCTCGGTATACCCCTGCCTCTGGGAACCATAACCATCCTCTGCATTGAT CTCGGCACTGACATGGTCCCTGCCATCTCCTTGGCTTATGAGTCAGCTGAAAGCGACATCATGAAGAGGCTTCCAAGGAACCCAAAGACG GATAATCTGGTGAACCACCGTCTCATTGGCATGGCCTATGGACAGATTGGGATGATCCAGGCTCTGGCTGGATTCTTTACCTACTTTGTA ATCCTGGCTGAGAATGGTTTTAGGCCTGTTGATCTGCTGGGCATCCGCCTCCACTGGGAAGATAAATACTTGAATGACCTGGAGGACAGC TACGGACAGCAGTGGACCTATGAGCAACGAAAAGTTGTGGAGTTCACATGCCAAACGGCCTTTTTTGTCACCATCGTGGTTGTGCAGTGG GCGGATCTCATCATCTCCAAGACTCGCCGCAACTCACTTTTCCAGCAGGGCATGAGAAACAAAGTCTTAATATTTGGGATCCTGGAGGAG ACACTCTTGGCTGCATTTCTGTCCTACACTCCAGGCATGGACGTGGCCCTGCGAATGTACCCACTCAAGATAACCTGGTGGCTCTGTGCC ATTCCCTACAGTATTCTCATCTTCGTCTATGATGAAATCAGAAAACTCCTCATCCGTCAGCACCCGGATGGCTGGGTGGAAAGGGAGACG TACTACTAAACTCAGCAGATGAAGAGCTTCATGTGACACAGGGGTGTTGTGAGAGCTGGGATGGGGCCAGAGATTATAAGTTTGACACAA CATCTGAGACACTAGGATGAATTATCTTGGATGAGAAAGATGGGCAATCCTGGGCTGGCTTGAGGGAATCATGGGCAGAGGATGAGGTGG GCTGAAGGGAAGCCCAGCCTGCATCTAGCTGGAGCCCCGCAGGGAGGGGCATGGTCCTGCTGAATCCCGTAGCCAGTCTAGACAGTAAAT |
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FusionGenePPI for NCSTN_ATP1A4 |
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Hgene | Hgene's interactors | Tgene | Tgene's interactors |
NCSTN | APH1A, PSEN1, PSENEN, PSEN2, APP, BACE1, ELAVL1, SPP1, FBXO6, ATP6V1B1, RPS14, THRAP3, RAD50, SRSF11, SEPT7, SEPT2, FTSJ3, USP39, UTP14A, RPS11, RBM25, PRPF6, SRSF10, RRS1, TRA2A, TRIM55, RRP7A, PSIP1, NUMA1, NOP56, TOP1, PHGDH, SURF4, RCC1, TOP2B, PRPF40A, SMARCC2, SRSF1, RFC4, SAP18, NOP58, SUPT16H, U2AF1, NOP16, SLC27A2, RCC2, BCAS2, NOP2, PCDHA2, TPBG, GTF3C1, S100A9, SNRPD2, SSRP1, RPS7, IK, DPF2, SMARCA5, SMARCB1, LMNB1, LAMP2, SART1, TRMT112, WDR18, RSL1D1, SMU1, ZC3H18, HNRNPU, RAB31, MYBBP1A, SAFB, TMEM14B, HNRNPR, APH1B, ERLIN2, GSAP, LGALS3, HNRNPF, KHDRBS1, NTRK1, EWSR1, ALDOA, SLC25A5, ATP1A1, ATP2A2, ATP5A1, BSG, NDUFB5, SLC2A1, SLC7A5, SLC25A12, TRIP13, TTI1, TOMM20, SCAMP3, RPP38, SPTLC1, EBP, YIF1A, MAGED2, PRSS21, IMMT, ELL2, PNKD, TCTN3, CRNKL1, TRMT6, ESYT2, SQRDL, SRPRB, FASTKD5, FAM111A, MMS19, WLS, CLPTM1L, MAGT1, C19orf52, SFXN1, ACTA1, ALOX5, MICAL1, RRAS, SRC, PAG1, EEF1A2, EEPD1, PTPRG, VASN, AHNAK2, EPHA2, YES1, RAP2A, NCAM1 | ATP1A4 | CUL3, COPS5, CAND1, P2RY8, ATP1B4, CHRM3, HIST1H4A, RPGR, LRRCC1, CYLD |
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Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Still interaction with |
Tgene | ATP1A4 | chr1:160314616 | chr1:160145882 | ENST00000470705 | + | 0 | 5 | 90_92 | -37 | 166 | phosphoinositide-3 kinase |
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Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Interaction lost with |
Tgene | ATP1A4 | chr1:160314616 | chr1:160145882 | ENST00000368081 | + | 14 | 22 | 90_92 | 770 | 1030 | phosphoinositide-3 kinase |
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Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Interaction lost with |
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RelatedDrugs for NCSTN_ATP1A4 |
![]() (DrugBank Version 5.1.0 2018-04-02) |
Partner | Gene | UniProtAcc | DrugBank ID | Drug name | Drug activity | Drug type | Drug status |
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RelatedDiseases for NCSTN_ATP1A4 |
![]() (DisGeNet 4.0) |
Partner | Gene | Disease ID | Disease name | # pubmeds | Source |
Hgene | NCSTN | C1840560 | Hidradenitis suppurativa, familial | 2 | CTD_human;UNIPROT |
Hgene | NCSTN | C0002395 | Alzheimer's Disease | 1 | CTD_human |