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Fusion gene ID: 23491 |
FusionGeneSummary for NBAS_THADA |
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Fusion gene information | Fusion gene name: NBAS_THADA | Fusion gene ID: 23491 | Hgene | Tgene | Gene symbol | NBAS | THADA | Gene ID | 51594 | 63892 |
Gene name | neuroblastoma amplified sequence | THADA, armadillo repeat containing | |
Synonyms | ILFS2|NAG|SOPH | ARMC13|GITA | |
Cytomap | 2p24.3 | 2p21 | |
Type of gene | protein-coding | protein-coding | |
Description | neuroblastoma-amplified sequenceNAG/BC035112 fusionNAG/FAM49A fusionneuroblastoma-amplified gene protein | thyroid adenoma-associated proteindeath receptor-interacting proteingene inducing thyroid adenomas protein | |
Modification date | 20180519 | 20180523 | |
UniProtAcc | A2RRP1 | Q6YHU6 | |
Ensembl transtripts involved in fusion gene | ENST00000441750, ENST00000281513, | ENST00000330266, ENST00000405975, ENST00000415080, ENST00000405006, ENST00000485353, ENST00000402360, ENST00000404790, ENST00000403856, | |
Fusion gene scores | * DoF score | 11 X 10 X 7=770 | 9 X 9 X 7=567 |
# samples | 12 | 10 | |
** MAII score | log2(12/770*10)=-2.68182403997375 possibly effective Gene in Pan-Cancer Fusion Genes (peGinPCFGs). DoF>8 and MAII<0 | log2(10/567*10)=-2.5033487351675 possibly effective Gene in Pan-Cancer Fusion Genes (peGinPCFGs). DoF>8 and MAII<0 | |
Context | PubMed: NBAS [Title/Abstract] AND THADA [Title/Abstract] AND fusion [Title/Abstract] | ||
Functional or gene categories assigned by FusionGDB annotation |
* DoF score (Degree of Frequency) = # partners X # break points X # cancer types ** MAII score (Major Active Isofusion Index) = log2(# samples/DoF score*10) |
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Partner | Gene | GO ID | GO term | PubMed ID |
![]() (ChiTars (NAR, 2018), tumorfusions (NAR, 2018), Gao et al. (Cell, 2018)) * All genome coordinats were lifted-over on hg19. * Click on the break point to see the gene structure around the break point region using the UCSC Genome Browser. |
Data type | Source | Cancer type | Sample | Hgene | Hchr | Hbp | Hstrand | Tgene | Tchr | Tbp | Tstrand |
TCGA | RV | BRCA | TCGA-AO-A0J4-01A | NBAS | chr2 | 15467874 | - | THADA | chr2 | 43819555 | - |
* LD: Li Ding group's fusion gene list RV: Roel Verhaak group's fusion gene list ChiTaRs fusion database |
![]() * Click on the break point to see the gene structure around the break point region using the UCSC Genome Browser. |
ORF | Henst | Tenst | Hgene | Hchr | Hbp | Hstrand | Tgene | Tchr | Tbp | Tstrand |
5CDS-intron | ENST00000441750 | ENST00000330266 | NBAS | chr2 | 15467874 | - | THADA | chr2 | 43819555 | - |
5CDS-5UTR | ENST00000441750 | ENST00000405975 | NBAS | chr2 | 15467874 | - | THADA | chr2 | 43819555 | - |
5CDS-5UTR | ENST00000441750 | ENST00000415080 | NBAS | chr2 | 15467874 | - | THADA | chr2 | 43819555 | - |
5CDS-5UTR | ENST00000441750 | ENST00000405006 | NBAS | chr2 | 15467874 | - | THADA | chr2 | 43819555 | - |
5CDS-intron | ENST00000441750 | ENST00000485353 | NBAS | chr2 | 15467874 | - | THADA | chr2 | 43819555 | - |
5CDS-intron | ENST00000441750 | ENST00000402360 | NBAS | chr2 | 15467874 | - | THADA | chr2 | 43819555 | - |
5CDS-5UTR | ENST00000441750 | ENST00000404790 | NBAS | chr2 | 15467874 | - | THADA | chr2 | 43819555 | - |
5CDS-5UTR | ENST00000441750 | ENST00000403856 | NBAS | chr2 | 15467874 | - | THADA | chr2 | 43819555 | - |
5CDS-intron | ENST00000281513 | ENST00000330266 | NBAS | chr2 | 15467874 | - | THADA | chr2 | 43819555 | - |
5CDS-5UTR | ENST00000281513 | ENST00000405975 | NBAS | chr2 | 15467874 | - | THADA | chr2 | 43819555 | - |
5CDS-5UTR | ENST00000281513 | ENST00000415080 | NBAS | chr2 | 15467874 | - | THADA | chr2 | 43819555 | - |
5CDS-5UTR | ENST00000281513 | ENST00000405006 | NBAS | chr2 | 15467874 | - | THADA | chr2 | 43819555 | - |
5CDS-intron | ENST00000281513 | ENST00000485353 | NBAS | chr2 | 15467874 | - | THADA | chr2 | 43819555 | - |
5CDS-intron | ENST00000281513 | ENST00000402360 | NBAS | chr2 | 15467874 | - | THADA | chr2 | 43819555 | - |
5CDS-5UTR | ENST00000281513 | ENST00000404790 | NBAS | chr2 | 15467874 | - | THADA | chr2 | 43819555 | - |
5CDS-5UTR | ENST00000281513 | ENST00000403856 | NBAS | chr2 | 15467874 | - | THADA | chr2 | 43819555 | - |
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FusionProtFeatures for NBAS_THADA |
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Hgene | Tgene |
NBAS | THADA |
Involved in Golgi-to-endoplasmic reticulum (ER)retrograde transport; the function is proposed to depend on itsassociation in the NRZ complex which is believed to play a role inSNARE assembly at the ER (PubMed:19369418).{ECO:0000269|PubMed:19369418, ECO:0000305}. |
![]() * Minus value of BPloci means that the break pointn is located before the CDS. |
- In-frame and retained protein feature among the 13 regional features. |
Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Protein feature | Protein feature note |
- In-frame and not-retained protein feature among the 13 regional features. |
Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Protein feature | Protein feature note |
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FusionGeneSequence for NBAS_THADA |
![]() (nt: nucleotides, aa: amino acids) |
* Fusion amino acid sequences. |
* Fusion transcript sequences (only coding sequence (CDS) region). |
* Fusion transcript sequences (Full-length transcript). |
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FusionGenePPI for NBAS_THADA |
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Hgene | Hgene's interactors | Tgene | Tgene's interactors |
NBAS | VTI1B, STX6, USE1, STX12, NAPG, STX18, HSPB1, NTRK1, AK1, DVL2, RINT1, SCFD2, SEC22B, VAMP4, TEX28 | THADA | CUL3, UBA2, AHCYL1, SRXN1, SSSCA1, SEC24A, SEC23A, SULT1A1, NUBP2, STAM, IGBP1, PSAT1, SIN3A, TES, EGFR, USHBP1, CD274, VSIG2, CA14, LYPD3, SCN2B, ALDH3A2, NTRK1, VASN, TMEM206, TNFRSF1A, OPRM1, SIGLECL1, CHRM4, FZD10, ILVBL, EDNRB, NAA10, CCKBR, CD83, APLNR, MLST8, MTOR, XPO6, XPO4 |
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Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Still interaction with |
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Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Interaction lost with |
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Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Interaction lost with |
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RelatedDrugs for NBAS_THADA |
![]() (DrugBank Version 5.1.0 2018-04-02) |
Partner | Gene | UniProtAcc | DrugBank ID | Drug name | Drug activity | Drug type | Drug status |
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RelatedDiseases for NBAS_THADA |
![]() (DisGeNet 4.0) |
Partner | Gene | Disease ID | Disease name | # pubmeds | Source |
Hgene | NBAS | C0038356 | Stomach Neoplasms | 1 | CTD_human |
Hgene | NBAS | C3541319 | SHORT STATURE, OPTIC NERVE ATROPHY, AND PELGER-HUET ANOMALY | 1 | ORPHANET;UNIPROT |
Hgene | NBAS | C3809651 | INFANTILE LIVER FAILURE SYNDROME 2 | 1 | ORPHANET;UNIPROT |
Tgene | THADA | C0011860 | Diabetes Mellitus, Non-Insulin-Dependent | 1 | CTD_human |