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Fusion gene ID: 23268 |
FusionGeneSummary for NAA15_HHIP |
 Fusion gene summary |
| Fusion gene information | Fusion gene name: NAA15_HHIP | Fusion gene ID: 23268 | Hgene | Tgene | Gene symbol | NAA15 | HHIP | Gene ID | 80155 | 64399 |
| Gene name | N(alpha)-acetyltransferase 15, NatA auxiliary subunit | hedgehog interacting protein | |
| Synonyms | Ga19|MRD50|NARG1|NAT1P|NATH|TBDN|TBDN100 | HIP | |
| Cytomap | 4q31.1 | 4q31.21 | |
| Type of gene | protein-coding | protein-coding | |
| Description | N-alpha-acetyltransferase 15, NatA auxiliary subunitN-terminal acetyltransferaseNMDA receptor regulated 1NMDA receptor-regulated protein 1gastric cancer antigen Ga19protein tubedown-1transcriptional coactivator tubedown-100tubedown-1 | hedgehog-interacting protein | |
| Modification date | 20180523 | 20180523 | |
| UniProtAcc | Q9BXJ9 | Q96QV1 | |
| Ensembl transtripts involved in fusion gene | ENST00000296543, ENST00000398947, ENST00000480277, ENST00000515576, | ENST00000296575, ENST00000434550, ENST00000511314, | |
| Fusion gene scores | * DoF score | 5 X 4 X 6=120 | 1 X 1 X 1=1 |
| # samples | 6 | 1 | |
| ** MAII score | log2(6/120*10)=-1 possibly effective Gene in Pan-Cancer Fusion Genes (peGinPCFGs). DoF>8 and MAII<0 | log2(1/1*10)=3.32192809488736 | |
| Context | PubMed: NAA15 [Title/Abstract] AND HHIP [Title/Abstract] AND fusion [Title/Abstract] | ||
| Functional or gene categories assigned by FusionGDB annotation | |||
| * DoF score (Degree of Frequency) = # partners X # break points X # cancer types ** MAII score (Major Active Isofusion Index) = log2(# samples/DoF score*10) |
| Gene ontology of each fusion partner gene with evidence of Inferred from Direct Assay (IDA) from Entrez |
| Partner | Gene | GO ID | GO term | PubMed ID |
| Hgene | NAA15 | GO:0006474 | N-terminal protein amino acid acetylation | 15496142 |
| Hgene | NAA15 | GO:0045893 | positive regulation of transcription, DNA-templated | 12145306 |
| Tgene | HHIP | GO:0009968 | negative regulation of signal transduction | 19561609 |
| Fusion gene information from three resources (ChiTars (NAR, 2018), tumorfusions (NAR, 2018), Gao et al. (Cell, 2018)) * All genome coordinats were lifted-over on hg19. * Click on the break point to see the gene structure around the break point region using the UCSC Genome Browser. |
| Data type | Source | Cancer type | Sample | Hgene | Hchr | Hbp | Hstrand | Tgene | Tchr | Tbp | Tstrand |
| TCGA | RV | PRAD | TCGA-V1-A9OQ-01A | NAA15 | chr4 | 140222985 | + | HHIP | chr4 | 145580789 | + |
| * LD: Li Ding group's fusion gene list RV: Roel Verhaak group's fusion gene list ChiTaRs fusion database |
| Open reading frame (ORF) analsis of fusion genes based on Ensembl gene isoform structure. * Click on the break point to see the gene structure around the break point region using the UCSC Genome Browser. |
| ORF | Henst | Tenst | Hgene | Hchr | Hbp | Hstrand | Tgene | Tchr | Tbp | Tstrand |
| Frame-shift | ENST00000296543 | ENST00000296575 | NAA15 | chr4 | 140222985 | + | HHIP | chr4 | 145580789 | + |
| In-frame | ENST00000296543 | ENST00000434550 | NAA15 | chr4 | 140222985 | + | HHIP | chr4 | 145580789 | + |
| 5CDS-3UTR | ENST00000296543 | ENST00000511314 | NAA15 | chr4 | 140222985 | + | HHIP | chr4 | 145580789 | + |
| Frame-shift | ENST00000398947 | ENST00000296575 | NAA15 | chr4 | 140222985 | + | HHIP | chr4 | 145580789 | + |
| In-frame | ENST00000398947 | ENST00000434550 | NAA15 | chr4 | 140222985 | + | HHIP | chr4 | 145580789 | + |
| 5CDS-3UTR | ENST00000398947 | ENST00000511314 | NAA15 | chr4 | 140222985 | + | HHIP | chr4 | 145580789 | + |
| intron-3CDS | ENST00000480277 | ENST00000296575 | NAA15 | chr4 | 140222985 | + | HHIP | chr4 | 145580789 | + |
| intron-3CDS | ENST00000480277 | ENST00000434550 | NAA15 | chr4 | 140222985 | + | HHIP | chr4 | 145580789 | + |
| intron-3UTR | ENST00000480277 | ENST00000511314 | NAA15 | chr4 | 140222985 | + | HHIP | chr4 | 145580789 | + |
| intron-3CDS | ENST00000515576 | ENST00000296575 | NAA15 | chr4 | 140222985 | + | HHIP | chr4 | 145580789 | + |
| intron-3CDS | ENST00000515576 | ENST00000434550 | NAA15 | chr4 | 140222985 | + | HHIP | chr4 | 145580789 | + |
| intron-3UTR | ENST00000515576 | ENST00000511314 | NAA15 | chr4 | 140222985 | + | HHIP | chr4 | 145580789 | + |
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FusionProtFeatures for NAA15_HHIP |
| Main function of each fusion partner protein. (from UniProt) |
| Hgene | Tgene |
| NAA15 | HHIP |
| Auxillary subunit of the N-terminal acetyltransferase A(NatA) complex which displays alpha (N-terminal) acetyltransferaseactivity. The NAT activity may be important for vascular,hematopoietic and neuronal growth and development. Required tocontrol retinal neovascularization in adult ocular endothelialcells. In complex with XRCC6 and XRCC5 (Ku80), up-regulatestranscription from the osteocalcin promoter.{ECO:0000269|PubMed:11687548, ECO:0000269|PubMed:12145306,ECO:0000269|PubMed:15496142}. | Modulates hedgehog signaling in several cell typesincluding brain and lung through direct interaction with membersof the hedgehog family. {ECO:0000269|PubMed:11472839,ECO:0000269|PubMed:19561609}. |
| Retention analysis result of each fusion partner protein across 39 protein features of UniProt such as six molecule processing features, 13 region features, four site features, six amino acid modification features, two natural variation features, five experimental info features, and 3 secondary structure features. Here, because of limited space for viewing, we only show the protein feature retention information belong to the 13 regional features. All retention annotation result can be downloaded at . * Minus value of BPloci means that the break pointn is located before the CDS. |
| - In-frame and retained protein feature among the 13 regional features. |
| Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Protein feature | Protein feature note |
| - In-frame and not-retained protein feature among the 13 regional features. |
| Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Protein feature | Protein feature note |
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FusionGeneSequence for NAA15_HHIP |
| For in-frame fusion transcripts, we provide the fusion transcript sequences and fusion amino acid sequences. (nt: nucleotides, aa: amino acids) |
| * Fusion amino acid sequences. |
| >In-frame_NAA15_ENST00000296543_chr4_140222985_+_HHIP_ENST00000434550_chr4_145580789_+_129aa MPAVSLPPKENALFKRILKAQTQLLLYSGGCEWAAAARWCPAXWGWLATSLHSGKRRLCEDTYPXRRNFQGALFGHSQTCSKWNKGWLFK >In-frame_NAA15_ENST00000398947_chr4_140222985_+_HHIP_ENST00000434550_chr4_145580789_+_129aa MPAVSLPPKENALFKRILKAQTQLLLYSGGCEWAAAARWCPAXWGWLATSLHSGKRRLCEDTYPXRRNFQGALFGHSQTCSKWNKGWLFK |
| * Fusion transcript sequences (only coding sequence (CDS) region). |
| >In-frame_NAA15_ENST00000296543_chr4_140222985_+_HHIP_ENST00000434550_chr4_145580789_+_388nt ATGCCGGCCGTGAGCCTCCCGCCCAAGGAGAATGCGCTCTTCAAGCGGATCTTGAAAGCACAAACACAACTGCTTCTGTATTCAGGAGGT TGTGAGTGGGCTGCGGCAGCCCGTTGGTGCCCTGCATAGTGGGGATGGCTCGCAACGTCTCTTCATTCTGGAAAAAGAAGGTTATGTGAA GATACTTACCCCTGAAGGAGAAATTTTCAAGGAGCCTTATTTGGACATTCACAAACTTGTTCAAAGTGGAATAAAGGTTGGCTTTTTAAA TTTTATTTATTTTTGTGCTGGCTACGTTAATTTTATTTTAGTGTTACCTTCCTCACTGAAGGTATTTCTTTGTAATAAAAGAAAGAATCT >In-frame_NAA15_ENST00000398947_chr4_140222985_+_HHIP_ENST00000434550_chr4_145580789_+_388nt ATGCCGGCCGTGAGCCTCCCGCCCAAGGAGAATGCGCTCTTCAAGCGGATCTTGAAAGCACAAACACAACTGCTTCTGTATTCAGGAGGT TGTGAGTGGGCTGCGGCAGCCCGTTGGTGCCCTGCATAGTGGGGATGGCTCGCAACGTCTCTTCATTCTGGAAAAAGAAGGTTATGTGAA GATACTTACCCCTGAAGGAGAAATTTTCAAGGAGCCTTATTTGGACATTCACAAACTTGTTCAAAGTGGAATAAAGGTTGGCTTTTTAAA TTTTATTTATTTTTGTGCTGGCTACGTTAATTTTATTTTAGTGTTACCTTCCTCACTGAAGGTATTTCTTTGTAATAAAAGAAAGAATCT |
| * Fusion transcript sequences (Full-length transcript). |
| >In-frame_NAA15_ENST00000296543_chr4_140222985_+_HHIP_ENST00000434550_chr4_145580789_+_1014nt GTGTTAGGAAGCGTGACCCGGGTGGGAAAACCCTCCGCGTCCGCCATTTTGGCTGCCTCTGTCGGTCTGTTCAGTTACCACGTGAACCGC CGACGGAGACCCGTAGTGGGGGAGGCGGCGGCAGCGTTAAGTGAGAAAGGAAAAAAGACAACGAGGAAAAAGGAGGTGTCCGGGTAGGGC AACGCGGCGACACCCGAGGCCTGGTGGTGGCGGCGGATCGAGATATTCAAGGCTGAAGCAGCTACGGAACGGCAGCGGCGGCGGTCGGAC AAACTGACTGACCGAGCCGGGTGGTGGCGGGAGCAGCGGGAGCAGCCGGAACGATGCCGGCCGTGAGCCTCCCGCCCAAGGAGAATGCGC TCTTCAAGCGGATCTTGAAAGCACAAACACAACTGCTTCTGTATTCAGGAGGTTGTGAGTGGGCTGCGGCAGCCCGTTGGTGCCCTGCAT AGTGGGGATGGCTCGCAACGTCTCTTCATTCTGGAAAAAGAAGGTTATGTGAAGATACTTACCCCTGAAGGAGAAATTTTCAAGGAGCCT TATTTGGACATTCACAAACTTGTTCAAAGTGGAATAAAGGTTGGCTTTTTAAATTTTATTTATTTTTGTGCTGGCTACGTTAATTTTATT TTAGTGTTACCTTCCTCACTGAAGGTATTTCTTTGTAATAAAAGAAAGAATCTTGCAGGAGAAAATAAGGGGGCAACATAAGAAACAATA ATTATGGCACCTGAATTAGGACAGTGACATTAAATTTCTGTTATTTGTTGACTATTGTGCGCTGCAATCGAATTGATATTTGACATGCTT TCCCCATGTAATTGACACATTTAAAGGAATCTTTGGCTTTATAAAGTATTGTTTAAATATTGTTTAATGGGCATAACACAGGACTGTACA TCAGCATTTGCTAGTAGAAACAAAGAGGTCTTTTGGTTATTTTGGCAATTGCAAATCATTCTTTCACCATCTCTGTTTTTGAGTCTGTCT >In-frame_NAA15_ENST00000398947_chr4_140222985_+_HHIP_ENST00000434550_chr4_145580789_+_881nt AGAAAGGAAAAAAGACAACGAGGAAAAAGGAGGTGTCCGGGTAGGGCAACGCGGCGACACCCGAGGCCTGGTGGTGGCGGCGGATCGAGA TATTCAAGGCTGAAGCAGCTACGGAACGGCAGCGGCGGCGGTCGGACAAACTGACTGACCGAGCCGGGTGGTGGCGGGAGCAGCGGGAGC AGCCGGAACGATGCCGGCCGTGAGCCTCCCGCCCAAGGAGAATGCGCTCTTCAAGCGGATCTTGAAAGCACAAACACAACTGCTTCTGTA TTCAGGAGGTTGTGAGTGGGCTGCGGCAGCCCGTTGGTGCCCTGCATAGTGGGGATGGCTCGCAACGTCTCTTCATTCTGGAAAAAGAAG GTTATGTGAAGATACTTACCCCTGAAGGAGAAATTTTCAAGGAGCCTTATTTGGACATTCACAAACTTGTTCAAAGTGGAATAAAGGTTG GCTTTTTAAATTTTATTTATTTTTGTGCTGGCTACGTTAATTTTATTTTAGTGTTACCTTCCTCACTGAAGGTATTTCTTTGTAATAAAA GAAAGAATCTTGCAGGAGAAAATAAGGGGGCAACATAAGAAACAATAATTATGGCACCTGAATTAGGACAGTGACATTAAATTTCTGTTA TTTGTTGACTATTGTGCGCTGCAATCGAATTGATATTTGACATGCTTTCCCCATGTAATTGACACATTTAAAGGAATCTTTGGCTTTATA AAGTATTGTTTAAATATTGTTTAATGGGCATAACACAGGACTGTACATCAGCATTTGCTAGTAGAAACAAAGAGGTCTTTTGGTTATTTT |
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FusionGenePPI for NAA15_HHIP |
| Go to ChiPPI (Chimeric Protein-Protein interactions) to see the chimeric PPI interaction in . |
| Protein-protein interactors with each fusion partner protein in wild-type (BIOGRID-3.4.160) |
| Hgene | Hgene's interactors | Tgene | Tgene's interactors |
| NAA15 | UBA5, XRCC6, XRCC5, RAD21, SIRT7, NAA10, HYPK, ASUN, MATR3, FN1, VCAM1, ITGA4, DDI2, STAT1, TSNAX, VPS26A, NAA50, PYCARD, MBD5, CYP1A1, CAND2, CMAS, DHX9, DRG1, FBL, HNRNPR, PSMC3, PSMD12, PSMD3, YARS, NAA20, NTRK1, KRAS, CEP97, CNTRL, DCTN1, POC5, STIL, SRPR, RNF126, ZNF746, NAA16, ARRB2, TRAFD1, FGB, SNRNP27, GTF2E2, USP47, MRPS11, FGF9, BRCA1 | HHIP | HDAC11 |
| - Retained PPIs in in-frame fusion. |
| Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Still interaction with |
| - Lost PPIs in in-frame fusion. |
| Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Interaction lost with |
| - Retained PPIs, but lost function due to frame-shift fusion. |
| Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Interaction lost with |
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RelatedDrugs for NAA15_HHIP |
| Drugs targeting genes involved in this fusion gene. (DrugBank Version 5.1.0 2018-04-02) |
| Partner | Gene | UniProtAcc | DrugBank ID | Drug name | Drug activity | Drug type | Drug status |
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RelatedDiseases for NAA15_HHIP |
| Diseases associated with fusion partners. (DisGeNet 4.0) |
| Partner | Gene | Disease ID | Disease name | # pubmeds | Source |
| Tgene | HHIP | C2239176 | Liver carcinoma | 1 | CTD_human |
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