	FusionGeneSummary
	FusionProtFeature
	FusionGeneSequence
	FusionGenePPI
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Fusion gene ID: 22873

FusionGeneSummary for MUC1_MUC1

Fusion gene summary

Fusion gene information	Fusion gene name: MUC1_MUC1
	Fusion gene ID: 22873
		Hgene	Tgene
	Gene symbol	MUC1	MUC1
	Gene ID	4582	4582
	Gene name	mucin 1, cell surface associated	mucin 1, cell surface associated
	Synonyms	ADMCKD\|ADMCKD1\|CA 15-3\|CD227\|EMA\|H23AG\|KL-6\|MAM6\|MCD\|MCKD\|MCKD1\|MUC-1\|MUC-1/SEC\|MUC-1/X\|MUC1/ZD\|PEM\|PEMT\|PUM	ADMCKD\|ADMCKD1\|CA 15-3\|CD227\|EMA\|H23AG\|KL-6\|MAM6\|MCD\|MCKD\|MCKD1\|MUC-1\|MUC-1/SEC\|MUC-1/X\|MUC1/ZD\|PEM\|PEMT\|PUM
	Cytomap	1q22	1q22
	Type of gene	protein-coding	protein-coding
	Description	mucin-1H23 antigenbreast carcinoma-associated antigen DF3cancer antigen 15-3carcinoma-associated mucinepisialinkrebs von den Lungen-6mucin 1, transmembranepeanut-reactive urinary mucinpolymorphic epithelial mucintumor associated epithelial mucin	mucin-1H23 antigenbreast carcinoma-associated antigen DF3cancer antigen 15-3carcinoma-associated mucinepisialinkrebs von den Lungen-6mucin 1, transmembranepeanut-reactive urinary mucinpolymorphic epithelial mucintumor associated epithelial mucin
	Modification date	20180527	20180527
	UniProtAcc	P15941	P15941
	Ensembl transtripts involved in fusion gene	ENST00000368395, ENST00000338684, ENST00000438413, ENST00000457295, ENST00000462215, ENST00000368392, ENST00000368393, ENST00000368390, ENST00000368396, ENST00000343256, ENST00000368398, ENST00000368389, ENST00000342482, ENST00000337604,	ENST00000368395, ENST00000338684, ENST00000438413, ENST00000457295, ENST00000462215, ENST00000368392, ENST00000368393, ENST00000368390, ENST00000368396, ENST00000343256, ENST00000368398, ENST00000368389, ENST00000342482, ENST00000337604,
Fusion gene scores	* DoF score	7 X 7 X 3=147	4 X 5 X 2=40
	# samples	8	8
	** MAII score	log2(8/147*10)=-0.877744249949002 possibly effective Gene in Pan-Cancer Fusion Genes (peGinPCFGs). DoF>8 and MAII<0	log2(8/40*10)=1 effective Gene in Pan-Cancer Fusion Genes (eGinPCFGs). DoF>8 and MAII>0
Context	PubMed: MUC1 [Title/Abstract] AND MUC1 [Title/Abstract] AND fusion [Title/Abstract]
Functional or gene categories assigned by FusionGDB annotation

* DoF score (Degree of Frequency) = # partners X # break points X # cancer types
** MAII score (Major Active Isofusion Index) = log2(# samples/DoF score*10)

Gene ontology of each fusion partner gene with evidence of Inferred from Direct Assay (IDA) from Entrez

Partner	Gene	GO ID	GO term	PubMed ID
Hgene	MUC1	GO:0006977	DNA damage response, signal transduction by p53 class mediator resulting in cell cycle arrest	15710329
Hgene	MUC1	GO:0006978	DNA damage response, signal transduction by p53 class mediator resulting in transcription of p21 class mediator	15710329
Hgene	MUC1	GO:0010944	negative regulation of transcription by competitive promoter binding	15710329
Hgene	MUC1	GO:0033629	negative regulation of cell adhesion mediated by integrin	7698991
Hgene	MUC1	GO:0036003	positive regulation of transcription from RNA polymerase II promoter in response to stress	15710329
Hgene	MUC1	GO:0043618	regulation of transcription from RNA polymerase II promoter in response to stress	15710329
Hgene	MUC1	GO:0090240	positive regulation of histone H4 acetylation	15710329
Hgene	MUC1	GO:1902166	negative regulation of intrinsic apoptotic signaling pathway in response to DNA damage by p53 class mediator	15710329
Tgene	MUC1	GO:0006977	DNA damage response, signal transduction by p53 class mediator resulting in cell cycle arrest	15710329
Tgene	MUC1	GO:0006978	DNA damage response, signal transduction by p53 class mediator resulting in transcription of p21 class mediator	15710329
Tgene	MUC1	GO:0010944	negative regulation of transcription by competitive promoter binding	15710329
Tgene	MUC1	GO:0033629	negative regulation of cell adhesion mediated by integrin	7698991
Tgene	MUC1	GO:0036003	positive regulation of transcription from RNA polymerase II promoter in response to stress	15710329
Tgene	MUC1	GO:0043618	regulation of transcription from RNA polymerase II promoter in response to stress	15710329
Tgene	MUC1	GO:0090240	positive regulation of histone H4 acetylation	15710329
Tgene	MUC1	GO:1902166	negative regulation of intrinsic apoptotic signaling pathway in response to DNA damage by p53 class mediator	15710329

Fusion gene information from three resources
(ChiTars (NAR, 2018), tumorfusions (NAR, 2018), Gao et al. (Cell, 2018))
* All genome coordinats were lifted-over on hg19.
* Click on the break point to see the gene structure around the break point region using the UCSC Genome Browser.

Data type	Source	Cancer type	Sample	Hgene	Hchr	Hbp	Hstrand	Tgene	Tchr	Tbp	Tstrand
ChiTaRS3.1			BF759082	MUC1	chr1	155160832	+	MUC1	chr1	155160974	-
ChiTaRS3.1			AA847094	MUC1	chr1	155160193	-	MUC1	chr1	155160771	+

* LD: Li Ding group's fusion gene list
RV: Roel Verhaak group's fusion gene list
ChiTaRs fusion database

Open reading frame (ORF) analsis of fusion genes based on Ensembl gene isoform structure.
* Click on the break point to see the gene structure around the break point region using the UCSC Genome Browser.

ORF	Henst	Tenst	Hgene	Hchr	Hbp	Hstrand	Tgene	Tchr	Tbp	Tstrand
intron-3CDS	ENST00000368395	ENST00000368395	MUC1	chr1	155160832	+	MUC1	chr1	155160974	-
intron-intron	ENST00000368395	ENST00000338684	MUC1	chr1	155160832	+	MUC1	chr1	155160974	-
intron-intron	ENST00000368395	ENST00000438413	MUC1	chr1	155160832	+	MUC1	chr1	155160974	-
intron-intron	ENST00000368395	ENST00000457295	MUC1	chr1	155160832	+	MUC1	chr1	155160974	-
intron-5UTR	ENST00000368395	ENST00000462215	MUC1	chr1	155160832	+	MUC1	chr1	155160974	-
intron-intron	ENST00000368395	ENST00000368392	MUC1	chr1	155160832	+	MUC1	chr1	155160974	-
intron-intron	ENST00000368395	ENST00000368393	MUC1	chr1	155160832	+	MUC1	chr1	155160974	-
intron-intron	ENST00000368395	ENST00000368390	MUC1	chr1	155160832	+	MUC1	chr1	155160974	-
intron-intron	ENST00000368395	ENST00000368396	MUC1	chr1	155160832	+	MUC1	chr1	155160974	-
intron-intron	ENST00000368395	ENST00000343256	MUC1	chr1	155160832	+	MUC1	chr1	155160974	-
intron-intron	ENST00000368395	ENST00000368398	MUC1	chr1	155160832	+	MUC1	chr1	155160974	-
intron-intron	ENST00000368395	ENST00000368389	MUC1	chr1	155160832	+	MUC1	chr1	155160974	-
intron-intron	ENST00000368395	ENST00000342482	MUC1	chr1	155160832	+	MUC1	chr1	155160974	-
intron-intron	ENST00000368395	ENST00000337604	MUC1	chr1	155160832	+	MUC1	chr1	155160974	-
intron-3CDS	ENST00000338684	ENST00000368395	MUC1	chr1	155160832	+	MUC1	chr1	155160974	-
intron-intron	ENST00000338684	ENST00000338684	MUC1	chr1	155160832	+	MUC1	chr1	155160974	-
intron-intron	ENST00000338684	ENST00000438413	MUC1	chr1	155160832	+	MUC1	chr1	155160974	-
intron-intron	ENST00000338684	ENST00000457295	MUC1	chr1	155160832	+	MUC1	chr1	155160974	-
intron-5UTR	ENST00000338684	ENST00000462215	MUC1	chr1	155160832	+	MUC1	chr1	155160974	-
intron-intron	ENST00000338684	ENST00000368392	MUC1	chr1	155160832	+	MUC1	chr1	155160974	-
intron-intron	ENST00000338684	ENST00000368393	MUC1	chr1	155160832	+	MUC1	chr1	155160974	-
intron-intron	ENST00000338684	ENST00000368390	MUC1	chr1	155160832	+	MUC1	chr1	155160974	-
intron-intron	ENST00000338684	ENST00000368396	MUC1	chr1	155160832	+	MUC1	chr1	155160974	-
intron-intron	ENST00000338684	ENST00000343256	MUC1	chr1	155160832	+	MUC1	chr1	155160974	-
intron-intron	ENST00000338684	ENST00000368398	MUC1	chr1	155160832	+	MUC1	chr1	155160974	-
intron-intron	ENST00000338684	ENST00000368389	MUC1	chr1	155160832	+	MUC1	chr1	155160974	-
intron-intron	ENST00000338684	ENST00000342482	MUC1	chr1	155160832	+	MUC1	chr1	155160974	-
intron-intron	ENST00000338684	ENST00000337604	MUC1	chr1	155160832	+	MUC1	chr1	155160974	-
intron-3CDS	ENST00000438413	ENST00000368395	MUC1	chr1	155160832	+	MUC1	chr1	155160974	-
intron-intron	ENST00000438413	ENST00000338684	MUC1	chr1	155160832	+	MUC1	chr1	155160974	-
intron-intron	ENST00000438413	ENST00000438413	MUC1	chr1	155160832	+	MUC1	chr1	155160974	-
intron-intron	ENST00000438413	ENST00000457295	MUC1	chr1	155160832	+	MUC1	chr1	155160974	-
intron-5UTR	ENST00000438413	ENST00000462215	MUC1	chr1	155160832	+	MUC1	chr1	155160974	-
intron-intron	ENST00000438413	ENST00000368392	MUC1	chr1	155160832	+	MUC1	chr1	155160974	-
intron-intron	ENST00000438413	ENST00000368393	MUC1	chr1	155160832	+	MUC1	chr1	155160974	-
intron-intron	ENST00000438413	ENST00000368390	MUC1	chr1	155160832	+	MUC1	chr1	155160974	-
intron-intron	ENST00000438413	ENST00000368396	MUC1	chr1	155160832	+	MUC1	chr1	155160974	-
intron-intron	ENST00000438413	ENST00000343256	MUC1	chr1	155160832	+	MUC1	chr1	155160974	-
intron-intron	ENST00000438413	ENST00000368398	MUC1	chr1	155160832	+	MUC1	chr1	155160974	-
intron-intron	ENST00000438413	ENST00000368389	MUC1	chr1	155160832	+	MUC1	chr1	155160974	-
intron-intron	ENST00000438413	ENST00000342482	MUC1	chr1	155160832	+	MUC1	chr1	155160974	-
intron-intron	ENST00000438413	ENST00000337604	MUC1	chr1	155160832	+	MUC1	chr1	155160974	-
intron-3CDS	ENST00000457295	ENST00000368395	MUC1	chr1	155160832	+	MUC1	chr1	155160974	-
intron-intron	ENST00000457295	ENST00000338684	MUC1	chr1	155160832	+	MUC1	chr1	155160974	-
intron-intron	ENST00000457295	ENST00000438413	MUC1	chr1	155160832	+	MUC1	chr1	155160974	-
intron-intron	ENST00000457295	ENST00000457295	MUC1	chr1	155160832	+	MUC1	chr1	155160974	-
intron-5UTR	ENST00000457295	ENST00000462215	MUC1	chr1	155160832	+	MUC1	chr1	155160974	-
intron-intron	ENST00000457295	ENST00000368392	MUC1	chr1	155160832	+	MUC1	chr1	155160974	-
intron-intron	ENST00000457295	ENST00000368393	MUC1	chr1	155160832	+	MUC1	chr1	155160974	-
intron-intron	ENST00000457295	ENST00000368390	MUC1	chr1	155160832	+	MUC1	chr1	155160974	-
intron-intron	ENST00000457295	ENST00000368396	MUC1	chr1	155160832	+	MUC1	chr1	155160974	-
intron-intron	ENST00000457295	ENST00000343256	MUC1	chr1	155160832	+	MUC1	chr1	155160974	-
intron-intron	ENST00000457295	ENST00000368398	MUC1	chr1	155160832	+	MUC1	chr1	155160974	-
intron-intron	ENST00000457295	ENST00000368389	MUC1	chr1	155160832	+	MUC1	chr1	155160974	-
intron-intron	ENST00000457295	ENST00000342482	MUC1	chr1	155160832	+	MUC1	chr1	155160974	-
intron-intron	ENST00000457295	ENST00000337604	MUC1	chr1	155160832	+	MUC1	chr1	155160974	-
intron-3CDS	ENST00000462215	ENST00000368395	MUC1	chr1	155160832	+	MUC1	chr1	155160974	-
intron-intron	ENST00000462215	ENST00000338684	MUC1	chr1	155160832	+	MUC1	chr1	155160974	-
intron-intron	ENST00000462215	ENST00000438413	MUC1	chr1	155160832	+	MUC1	chr1	155160974	-
intron-intron	ENST00000462215	ENST00000457295	MUC1	chr1	155160832	+	MUC1	chr1	155160974	-
intron-5UTR	ENST00000462215	ENST00000462215	MUC1	chr1	155160832	+	MUC1	chr1	155160974	-
intron-intron	ENST00000462215	ENST00000368392	MUC1	chr1	155160832	+	MUC1	chr1	155160974	-
intron-intron	ENST00000462215	ENST00000368393	MUC1	chr1	155160832	+	MUC1	chr1	155160974	-
intron-intron	ENST00000462215	ENST00000368390	MUC1	chr1	155160832	+	MUC1	chr1	155160974	-
intron-intron	ENST00000462215	ENST00000368396	MUC1	chr1	155160832	+	MUC1	chr1	155160974	-
intron-intron	ENST00000462215	ENST00000343256	MUC1	chr1	155160832	+	MUC1	chr1	155160974	-
intron-intron	ENST00000462215	ENST00000368398	MUC1	chr1	155160832	+	MUC1	chr1	155160974	-
intron-intron	ENST00000462215	ENST00000368389	MUC1	chr1	155160832	+	MUC1	chr1	155160974	-
intron-intron	ENST00000462215	ENST00000342482	MUC1	chr1	155160832	+	MUC1	chr1	155160974	-
intron-intron	ENST00000462215	ENST00000337604	MUC1	chr1	155160832	+	MUC1	chr1	155160974	-
intron-3CDS	ENST00000368392	ENST00000368395	MUC1	chr1	155160832	+	MUC1	chr1	155160974	-
intron-intron	ENST00000368392	ENST00000338684	MUC1	chr1	155160832	+	MUC1	chr1	155160974	-
intron-intron	ENST00000368392	ENST00000438413	MUC1	chr1	155160832	+	MUC1	chr1	155160974	-
intron-intron	ENST00000368392	ENST00000457295	MUC1	chr1	155160832	+	MUC1	chr1	155160974	-
intron-5UTR	ENST00000368392	ENST00000462215	MUC1	chr1	155160832	+	MUC1	chr1	155160974	-
intron-intron	ENST00000368392	ENST00000368392	MUC1	chr1	155160832	+	MUC1	chr1	155160974	-
intron-intron	ENST00000368392	ENST00000368393	MUC1	chr1	155160832	+	MUC1	chr1	155160974	-
intron-intron	ENST00000368392	ENST00000368390	MUC1	chr1	155160832	+	MUC1	chr1	155160974	-
intron-intron	ENST00000368392	ENST00000368396	MUC1	chr1	155160832	+	MUC1	chr1	155160974	-
intron-intron	ENST00000368392	ENST00000343256	MUC1	chr1	155160832	+	MUC1	chr1	155160974	-
intron-intron	ENST00000368392	ENST00000368398	MUC1	chr1	155160832	+	MUC1	chr1	155160974	-
intron-intron	ENST00000368392	ENST00000368389	MUC1	chr1	155160832	+	MUC1	chr1	155160974	-
intron-intron	ENST00000368392	ENST00000342482	MUC1	chr1	155160832	+	MUC1	chr1	155160974	-
intron-intron	ENST00000368392	ENST00000337604	MUC1	chr1	155160832	+	MUC1	chr1	155160974	-
intron-3CDS	ENST00000368393	ENST00000368395	MUC1	chr1	155160832	+	MUC1	chr1	155160974	-
intron-intron	ENST00000368393	ENST00000338684	MUC1	chr1	155160832	+	MUC1	chr1	155160974	-
intron-intron	ENST00000368393	ENST00000438413	MUC1	chr1	155160832	+	MUC1	chr1	155160974	-
intron-intron	ENST00000368393	ENST00000457295	MUC1	chr1	155160832	+	MUC1	chr1	155160974	-
intron-5UTR	ENST00000368393	ENST00000462215	MUC1	chr1	155160832	+	MUC1	chr1	155160974	-
intron-intron	ENST00000368393	ENST00000368392	MUC1	chr1	155160832	+	MUC1	chr1	155160974	-
intron-intron	ENST00000368393	ENST00000368393	MUC1	chr1	155160832	+	MUC1	chr1	155160974	-
intron-intron	ENST00000368393	ENST00000368390	MUC1	chr1	155160832	+	MUC1	chr1	155160974	-
intron-intron	ENST00000368393	ENST00000368396	MUC1	chr1	155160832	+	MUC1	chr1	155160974	-
intron-intron	ENST00000368393	ENST00000343256	MUC1	chr1	155160832	+	MUC1	chr1	155160974	-
intron-intron	ENST00000368393	ENST00000368398	MUC1	chr1	155160832	+	MUC1	chr1	155160974	-
intron-intron	ENST00000368393	ENST00000368389	MUC1	chr1	155160832	+	MUC1	chr1	155160974	-
intron-intron	ENST00000368393	ENST00000342482	MUC1	chr1	155160832	+	MUC1	chr1	155160974	-
intron-intron	ENST00000368393	ENST00000337604	MUC1	chr1	155160832	+	MUC1	chr1	155160974	-
intron-3CDS	ENST00000368390	ENST00000368395	MUC1	chr1	155160832	+	MUC1	chr1	155160974	-
intron-intron	ENST00000368390	ENST00000338684	MUC1	chr1	155160832	+	MUC1	chr1	155160974	-
intron-intron	ENST00000368390	ENST00000438413	MUC1	chr1	155160832	+	MUC1	chr1	155160974	-
intron-intron	ENST00000368390	ENST00000457295	MUC1	chr1	155160832	+	MUC1	chr1	155160974	-
intron-5UTR	ENST00000368390	ENST00000462215	MUC1	chr1	155160832	+	MUC1	chr1	155160974	-
intron-intron	ENST00000368390	ENST00000368392	MUC1	chr1	155160832	+	MUC1	chr1	155160974	-
intron-intron	ENST00000368390	ENST00000368393	MUC1	chr1	155160832	+	MUC1	chr1	155160974	-
intron-intron	ENST00000368390	ENST00000368390	MUC1	chr1	155160832	+	MUC1	chr1	155160974	-
intron-intron	ENST00000368390	ENST00000368396	MUC1	chr1	155160832	+	MUC1	chr1	155160974	-
intron-intron	ENST00000368390	ENST00000343256	MUC1	chr1	155160832	+	MUC1	chr1	155160974	-
intron-intron	ENST00000368390	ENST00000368398	MUC1	chr1	155160832	+	MUC1	chr1	155160974	-
intron-intron	ENST00000368390	ENST00000368389	MUC1	chr1	155160832	+	MUC1	chr1	155160974	-
intron-intron	ENST00000368390	ENST00000342482	MUC1	chr1	155160832	+	MUC1	chr1	155160974	-
intron-intron	ENST00000368390	ENST00000337604	MUC1	chr1	155160832	+	MUC1	chr1	155160974	-
intron-3CDS	ENST00000368396	ENST00000368395	MUC1	chr1	155160832	+	MUC1	chr1	155160974	-
intron-intron	ENST00000368396	ENST00000338684	MUC1	chr1	155160832	+	MUC1	chr1	155160974	-
intron-intron	ENST00000368396	ENST00000438413	MUC1	chr1	155160832	+	MUC1	chr1	155160974	-
intron-intron	ENST00000368396	ENST00000457295	MUC1	chr1	155160832	+	MUC1	chr1	155160974	-
intron-5UTR	ENST00000368396	ENST00000462215	MUC1	chr1	155160832	+	MUC1	chr1	155160974	-
intron-intron	ENST00000368396	ENST00000368392	MUC1	chr1	155160832	+	MUC1	chr1	155160974	-
intron-intron	ENST00000368396	ENST00000368393	MUC1	chr1	155160832	+	MUC1	chr1	155160974	-
intron-intron	ENST00000368396	ENST00000368390	MUC1	chr1	155160832	+	MUC1	chr1	155160974	-
intron-intron	ENST00000368396	ENST00000368396	MUC1	chr1	155160832	+	MUC1	chr1	155160974	-
intron-intron	ENST00000368396	ENST00000343256	MUC1	chr1	155160832	+	MUC1	chr1	155160974	-
intron-intron	ENST00000368396	ENST00000368398	MUC1	chr1	155160832	+	MUC1	chr1	155160974	-
intron-intron	ENST00000368396	ENST00000368389	MUC1	chr1	155160832	+	MUC1	chr1	155160974	-
intron-intron	ENST00000368396	ENST00000342482	MUC1	chr1	155160832	+	MUC1	chr1	155160974	-
intron-intron	ENST00000368396	ENST00000337604	MUC1	chr1	155160832	+	MUC1	chr1	155160974	-
intron-3CDS	ENST00000343256	ENST00000368395	MUC1	chr1	155160832	+	MUC1	chr1	155160974	-
intron-intron	ENST00000343256	ENST00000338684	MUC1	chr1	155160832	+	MUC1	chr1	155160974	-
intron-intron	ENST00000343256	ENST00000438413	MUC1	chr1	155160832	+	MUC1	chr1	155160974	-
intron-intron	ENST00000343256	ENST00000457295	MUC1	chr1	155160832	+	MUC1	chr1	155160974	-
intron-5UTR	ENST00000343256	ENST00000462215	MUC1	chr1	155160832	+	MUC1	chr1	155160974	-
intron-intron	ENST00000343256	ENST00000368392	MUC1	chr1	155160832	+	MUC1	chr1	155160974	-
intron-intron	ENST00000343256	ENST00000368393	MUC1	chr1	155160832	+	MUC1	chr1	155160974	-
intron-intron	ENST00000343256	ENST00000368390	MUC1	chr1	155160832	+	MUC1	chr1	155160974	-
intron-intron	ENST00000343256	ENST00000368396	MUC1	chr1	155160832	+	MUC1	chr1	155160974	-
intron-intron	ENST00000343256	ENST00000343256	MUC1	chr1	155160832	+	MUC1	chr1	155160974	-
intron-intron	ENST00000343256	ENST00000368398	MUC1	chr1	155160832	+	MUC1	chr1	155160974	-
intron-intron	ENST00000343256	ENST00000368389	MUC1	chr1	155160832	+	MUC1	chr1	155160974	-
intron-intron	ENST00000343256	ENST00000342482	MUC1	chr1	155160832	+	MUC1	chr1	155160974	-
intron-intron	ENST00000343256	ENST00000337604	MUC1	chr1	155160832	+	MUC1	chr1	155160974	-
intron-3CDS	ENST00000368398	ENST00000368395	MUC1	chr1	155160832	+	MUC1	chr1	155160974	-
intron-intron	ENST00000368398	ENST00000338684	MUC1	chr1	155160832	+	MUC1	chr1	155160974	-
intron-intron	ENST00000368398	ENST00000438413	MUC1	chr1	155160832	+	MUC1	chr1	155160974	-
intron-intron	ENST00000368398	ENST00000457295	MUC1	chr1	155160832	+	MUC1	chr1	155160974	-
intron-5UTR	ENST00000368398	ENST00000462215	MUC1	chr1	155160832	+	MUC1	chr1	155160974	-
intron-intron	ENST00000368398	ENST00000368392	MUC1	chr1	155160832	+	MUC1	chr1	155160974	-
intron-intron	ENST00000368398	ENST00000368393	MUC1	chr1	155160832	+	MUC1	chr1	155160974	-
intron-intron	ENST00000368398	ENST00000368390	MUC1	chr1	155160832	+	MUC1	chr1	155160974	-
intron-intron	ENST00000368398	ENST00000368396	MUC1	chr1	155160832	+	MUC1	chr1	155160974	-
intron-intron	ENST00000368398	ENST00000343256	MUC1	chr1	155160832	+	MUC1	chr1	155160974	-
intron-intron	ENST00000368398	ENST00000368398	MUC1	chr1	155160832	+	MUC1	chr1	155160974	-
intron-intron	ENST00000368398	ENST00000368389	MUC1	chr1	155160832	+	MUC1	chr1	155160974	-
intron-intron	ENST00000368398	ENST00000342482	MUC1	chr1	155160832	+	MUC1	chr1	155160974	-
intron-intron	ENST00000368398	ENST00000337604	MUC1	chr1	155160832	+	MUC1	chr1	155160974	-
intron-3CDS	ENST00000368389	ENST00000368395	MUC1	chr1	155160832	+	MUC1	chr1	155160974	-
intron-intron	ENST00000368389	ENST00000338684	MUC1	chr1	155160832	+	MUC1	chr1	155160974	-
intron-intron	ENST00000368389	ENST00000438413	MUC1	chr1	155160832	+	MUC1	chr1	155160974	-
intron-intron	ENST00000368389	ENST00000457295	MUC1	chr1	155160832	+	MUC1	chr1	155160974	-
intron-5UTR	ENST00000368389	ENST00000462215	MUC1	chr1	155160832	+	MUC1	chr1	155160974	-
intron-intron	ENST00000368389	ENST00000368392	MUC1	chr1	155160832	+	MUC1	chr1	155160974	-
intron-intron	ENST00000368389	ENST00000368393	MUC1	chr1	155160832	+	MUC1	chr1	155160974	-
intron-intron	ENST00000368389	ENST00000368390	MUC1	chr1	155160832	+	MUC1	chr1	155160974	-
intron-intron	ENST00000368389	ENST00000368396	MUC1	chr1	155160832	+	MUC1	chr1	155160974	-
intron-intron	ENST00000368389	ENST00000343256	MUC1	chr1	155160832	+	MUC1	chr1	155160974	-
intron-intron	ENST00000368389	ENST00000368398	MUC1	chr1	155160832	+	MUC1	chr1	155160974	-
intron-intron	ENST00000368389	ENST00000368389	MUC1	chr1	155160832	+	MUC1	chr1	155160974	-
intron-intron	ENST00000368389	ENST00000342482	MUC1	chr1	155160832	+	MUC1	chr1	155160974	-
intron-intron	ENST00000368389	ENST00000337604	MUC1	chr1	155160832	+	MUC1	chr1	155160974	-
intron-3CDS	ENST00000342482	ENST00000368395	MUC1	chr1	155160832	+	MUC1	chr1	155160974	-
intron-intron	ENST00000342482	ENST00000338684	MUC1	chr1	155160832	+	MUC1	chr1	155160974	-
intron-intron	ENST00000342482	ENST00000438413	MUC1	chr1	155160832	+	MUC1	chr1	155160974	-
intron-intron	ENST00000342482	ENST00000457295	MUC1	chr1	155160832	+	MUC1	chr1	155160974	-
intron-5UTR	ENST00000342482	ENST00000462215	MUC1	chr1	155160832	+	MUC1	chr1	155160974	-
intron-intron	ENST00000342482	ENST00000368392	MUC1	chr1	155160832	+	MUC1	chr1	155160974	-
intron-intron	ENST00000342482	ENST00000368393	MUC1	chr1	155160832	+	MUC1	chr1	155160974	-
intron-intron	ENST00000342482	ENST00000368390	MUC1	chr1	155160832	+	MUC1	chr1	155160974	-
intron-intron	ENST00000342482	ENST00000368396	MUC1	chr1	155160832	+	MUC1	chr1	155160974	-
intron-intron	ENST00000342482	ENST00000343256	MUC1	chr1	155160832	+	MUC1	chr1	155160974	-
intron-intron	ENST00000342482	ENST00000368398	MUC1	chr1	155160832	+	MUC1	chr1	155160974	-
intron-intron	ENST00000342482	ENST00000368389	MUC1	chr1	155160832	+	MUC1	chr1	155160974	-
intron-intron	ENST00000342482	ENST00000342482	MUC1	chr1	155160832	+	MUC1	chr1	155160974	-
intron-intron	ENST00000342482	ENST00000337604	MUC1	chr1	155160832	+	MUC1	chr1	155160974	-
intron-3CDS	ENST00000337604	ENST00000368395	MUC1	chr1	155160832	+	MUC1	chr1	155160974	-
intron-intron	ENST00000337604	ENST00000338684	MUC1	chr1	155160832	+	MUC1	chr1	155160974	-
intron-intron	ENST00000337604	ENST00000438413	MUC1	chr1	155160832	+	MUC1	chr1	155160974	-
intron-intron	ENST00000337604	ENST00000457295	MUC1	chr1	155160832	+	MUC1	chr1	155160974	-
intron-5UTR	ENST00000337604	ENST00000462215	MUC1	chr1	155160832	+	MUC1	chr1	155160974	-
intron-intron	ENST00000337604	ENST00000368392	MUC1	chr1	155160832	+	MUC1	chr1	155160974	-
intron-intron	ENST00000337604	ENST00000368393	MUC1	chr1	155160832	+	MUC1	chr1	155160974	-
intron-intron	ENST00000337604	ENST00000368390	MUC1	chr1	155160832	+	MUC1	chr1	155160974	-
intron-intron	ENST00000337604	ENST00000368396	MUC1	chr1	155160832	+	MUC1	chr1	155160974	-
intron-intron	ENST00000337604	ENST00000343256	MUC1	chr1	155160832	+	MUC1	chr1	155160974	-
intron-intron	ENST00000337604	ENST00000368398	MUC1	chr1	155160832	+	MUC1	chr1	155160974	-
intron-intron	ENST00000337604	ENST00000368389	MUC1	chr1	155160832	+	MUC1	chr1	155160974	-
intron-intron	ENST00000337604	ENST00000342482	MUC1	chr1	155160832	+	MUC1	chr1	155160974	-
intron-intron	ENST00000337604	ENST00000337604	MUC1	chr1	155160832	+	MUC1	chr1	155160974	-
Frame-shit	ENST00000368395	ENST00000368395	MUC1	chr1	155160193	-	MUC1	chr1	155160771	+
5CDS-intron	ENST00000368395	ENST00000338684	MUC1	chr1	155160193	-	MUC1	chr1	155160771	+
5CDS-intron	ENST00000368395	ENST00000438413	MUC1	chr1	155160193	-	MUC1	chr1	155160771	+
5CDS-intron	ENST00000368395	ENST00000457295	MUC1	chr1	155160193	-	MUC1	chr1	155160771	+
5CDS-intron	ENST00000368395	ENST00000462215	MUC1	chr1	155160193	-	MUC1	chr1	155160771	+
5CDS-intron	ENST00000368395	ENST00000368392	MUC1	chr1	155160193	-	MUC1	chr1	155160771	+
5CDS-intron	ENST00000368395	ENST00000368393	MUC1	chr1	155160193	-	MUC1	chr1	155160771	+
5CDS-intron	ENST00000368395	ENST00000368390	MUC1	chr1	155160193	-	MUC1	chr1	155160771	+
5CDS-intron	ENST00000368395	ENST00000368396	MUC1	chr1	155160193	-	MUC1	chr1	155160771	+
5CDS-intron	ENST00000368395	ENST00000343256	MUC1	chr1	155160193	-	MUC1	chr1	155160771	+
5CDS-intron	ENST00000368395	ENST00000368398	MUC1	chr1	155160193	-	MUC1	chr1	155160771	+
5CDS-intron	ENST00000368395	ENST00000368389	MUC1	chr1	155160193	-	MUC1	chr1	155160771	+
5CDS-intron	ENST00000368395	ENST00000342482	MUC1	chr1	155160193	-	MUC1	chr1	155160771	+
5CDS-intron	ENST00000368395	ENST00000337604	MUC1	chr1	155160193	-	MUC1	chr1	155160771	+
Frame-shit	ENST00000338684	ENST00000368395	MUC1	chr1	155160193	-	MUC1	chr1	155160771	+
5CDS-intron	ENST00000338684	ENST00000338684	MUC1	chr1	155160193	-	MUC1	chr1	155160771	+
5CDS-intron	ENST00000338684	ENST00000438413	MUC1	chr1	155160193	-	MUC1	chr1	155160771	+
5CDS-intron	ENST00000338684	ENST00000457295	MUC1	chr1	155160193	-	MUC1	chr1	155160771	+
5CDS-intron	ENST00000338684	ENST00000462215	MUC1	chr1	155160193	-	MUC1	chr1	155160771	+
5CDS-intron	ENST00000338684	ENST00000368392	MUC1	chr1	155160193	-	MUC1	chr1	155160771	+
5CDS-intron	ENST00000338684	ENST00000368393	MUC1	chr1	155160193	-	MUC1	chr1	155160771	+
5CDS-intron	ENST00000338684	ENST00000368390	MUC1	chr1	155160193	-	MUC1	chr1	155160771	+
5CDS-intron	ENST00000338684	ENST00000368396	MUC1	chr1	155160193	-	MUC1	chr1	155160771	+
5CDS-intron	ENST00000338684	ENST00000343256	MUC1	chr1	155160193	-	MUC1	chr1	155160771	+
5CDS-intron	ENST00000338684	ENST00000368398	MUC1	chr1	155160193	-	MUC1	chr1	155160771	+
5CDS-intron	ENST00000338684	ENST00000368389	MUC1	chr1	155160193	-	MUC1	chr1	155160771	+
5CDS-intron	ENST00000338684	ENST00000342482	MUC1	chr1	155160193	-	MUC1	chr1	155160771	+
5CDS-intron	ENST00000338684	ENST00000337604	MUC1	chr1	155160193	-	MUC1	chr1	155160771	+
Frame-shit	ENST00000438413	ENST00000368395	MUC1	chr1	155160193	-	MUC1	chr1	155160771	+
5CDS-intron	ENST00000438413	ENST00000338684	MUC1	chr1	155160193	-	MUC1	chr1	155160771	+
5CDS-intron	ENST00000438413	ENST00000438413	MUC1	chr1	155160193	-	MUC1	chr1	155160771	+
5CDS-intron	ENST00000438413	ENST00000457295	MUC1	chr1	155160193	-	MUC1	chr1	155160771	+
5CDS-intron	ENST00000438413	ENST00000462215	MUC1	chr1	155160193	-	MUC1	chr1	155160771	+
5CDS-intron	ENST00000438413	ENST00000368392	MUC1	chr1	155160193	-	MUC1	chr1	155160771	+
5CDS-intron	ENST00000438413	ENST00000368393	MUC1	chr1	155160193	-	MUC1	chr1	155160771	+
5CDS-intron	ENST00000438413	ENST00000368390	MUC1	chr1	155160193	-	MUC1	chr1	155160771	+
5CDS-intron	ENST00000438413	ENST00000368396	MUC1	chr1	155160193	-	MUC1	chr1	155160771	+
5CDS-intron	ENST00000438413	ENST00000343256	MUC1	chr1	155160193	-	MUC1	chr1	155160771	+
5CDS-intron	ENST00000438413	ENST00000368398	MUC1	chr1	155160193	-	MUC1	chr1	155160771	+
5CDS-intron	ENST00000438413	ENST00000368389	MUC1	chr1	155160193	-	MUC1	chr1	155160771	+
5CDS-intron	ENST00000438413	ENST00000342482	MUC1	chr1	155160193	-	MUC1	chr1	155160771	+
5CDS-intron	ENST00000438413	ENST00000337604	MUC1	chr1	155160193	-	MUC1	chr1	155160771	+
In-frame	ENST00000457295	ENST00000368395	MUC1	chr1	155160193	-	MUC1	chr1	155160771	+
5CDS-intron	ENST00000457295	ENST00000338684	MUC1	chr1	155160193	-	MUC1	chr1	155160771	+
5CDS-intron	ENST00000457295	ENST00000438413	MUC1	chr1	155160193	-	MUC1	chr1	155160771	+
5CDS-intron	ENST00000457295	ENST00000457295	MUC1	chr1	155160193	-	MUC1	chr1	155160771	+
5CDS-intron	ENST00000457295	ENST00000462215	MUC1	chr1	155160193	-	MUC1	chr1	155160771	+
5CDS-intron	ENST00000457295	ENST00000368392	MUC1	chr1	155160193	-	MUC1	chr1	155160771	+
5CDS-intron	ENST00000457295	ENST00000368393	MUC1	chr1	155160193	-	MUC1	chr1	155160771	+
5CDS-intron	ENST00000457295	ENST00000368390	MUC1	chr1	155160193	-	MUC1	chr1	155160771	+
5CDS-intron	ENST00000457295	ENST00000368396	MUC1	chr1	155160193	-	MUC1	chr1	155160771	+
5CDS-intron	ENST00000457295	ENST00000343256	MUC1	chr1	155160193	-	MUC1	chr1	155160771	+
5CDS-intron	ENST00000457295	ENST00000368398	MUC1	chr1	155160193	-	MUC1	chr1	155160771	+
5CDS-intron	ENST00000457295	ENST00000368389	MUC1	chr1	155160193	-	MUC1	chr1	155160771	+
5CDS-intron	ENST00000457295	ENST00000342482	MUC1	chr1	155160193	-	MUC1	chr1	155160771	+
5CDS-intron	ENST00000457295	ENST00000337604	MUC1	chr1	155160193	-	MUC1	chr1	155160771	+
5UTR-3CDS	ENST00000462215	ENST00000368395	MUC1	chr1	155160193	-	MUC1	chr1	155160771	+
5UTR-intron	ENST00000462215	ENST00000338684	MUC1	chr1	155160193	-	MUC1	chr1	155160771	+
5UTR-intron	ENST00000462215	ENST00000438413	MUC1	chr1	155160193	-	MUC1	chr1	155160771	+
5UTR-intron	ENST00000462215	ENST00000457295	MUC1	chr1	155160193	-	MUC1	chr1	155160771	+
5UTR-intron	ENST00000462215	ENST00000462215	MUC1	chr1	155160193	-	MUC1	chr1	155160771	+
5UTR-intron	ENST00000462215	ENST00000368392	MUC1	chr1	155160193	-	MUC1	chr1	155160771	+
5UTR-intron	ENST00000462215	ENST00000368393	MUC1	chr1	155160193	-	MUC1	chr1	155160771	+
5UTR-intron	ENST00000462215	ENST00000368390	MUC1	chr1	155160193	-	MUC1	chr1	155160771	+
5UTR-intron	ENST00000462215	ENST00000368396	MUC1	chr1	155160193	-	MUC1	chr1	155160771	+
5UTR-intron	ENST00000462215	ENST00000343256	MUC1	chr1	155160193	-	MUC1	chr1	155160771	+
5UTR-intron	ENST00000462215	ENST00000368398	MUC1	chr1	155160193	-	MUC1	chr1	155160771	+
5UTR-intron	ENST00000462215	ENST00000368389	MUC1	chr1	155160193	-	MUC1	chr1	155160771	+
5UTR-intron	ENST00000462215	ENST00000342482	MUC1	chr1	155160193	-	MUC1	chr1	155160771	+
5UTR-intron	ENST00000462215	ENST00000337604	MUC1	chr1	155160193	-	MUC1	chr1	155160771	+
Frame-shit	ENST00000368392	ENST00000368395	MUC1	chr1	155160193	-	MUC1	chr1	155160771	+
5CDS-intron	ENST00000368392	ENST00000338684	MUC1	chr1	155160193	-	MUC1	chr1	155160771	+
5CDS-intron	ENST00000368392	ENST00000438413	MUC1	chr1	155160193	-	MUC1	chr1	155160771	+
5CDS-intron	ENST00000368392	ENST00000457295	MUC1	chr1	155160193	-	MUC1	chr1	155160771	+
5CDS-intron	ENST00000368392	ENST00000462215	MUC1	chr1	155160193	-	MUC1	chr1	155160771	+
5CDS-intron	ENST00000368392	ENST00000368392	MUC1	chr1	155160193	-	MUC1	chr1	155160771	+
5CDS-intron	ENST00000368392	ENST00000368393	MUC1	chr1	155160193	-	MUC1	chr1	155160771	+
5CDS-intron	ENST00000368392	ENST00000368390	MUC1	chr1	155160193	-	MUC1	chr1	155160771	+
5CDS-intron	ENST00000368392	ENST00000368396	MUC1	chr1	155160193	-	MUC1	chr1	155160771	+
5CDS-intron	ENST00000368392	ENST00000343256	MUC1	chr1	155160193	-	MUC1	chr1	155160771	+
5CDS-intron	ENST00000368392	ENST00000368398	MUC1	chr1	155160193	-	MUC1	chr1	155160771	+
5CDS-intron	ENST00000368392	ENST00000368389	MUC1	chr1	155160193	-	MUC1	chr1	155160771	+
5CDS-intron	ENST00000368392	ENST00000342482	MUC1	chr1	155160193	-	MUC1	chr1	155160771	+
5CDS-intron	ENST00000368392	ENST00000337604	MUC1	chr1	155160193	-	MUC1	chr1	155160771	+
In-frame	ENST00000368393	ENST00000368395	MUC1	chr1	155160193	-	MUC1	chr1	155160771	+
5CDS-intron	ENST00000368393	ENST00000338684	MUC1	chr1	155160193	-	MUC1	chr1	155160771	+
5CDS-intron	ENST00000368393	ENST00000438413	MUC1	chr1	155160193	-	MUC1	chr1	155160771	+
5CDS-intron	ENST00000368393	ENST00000457295	MUC1	chr1	155160193	-	MUC1	chr1	155160771	+
5CDS-intron	ENST00000368393	ENST00000462215	MUC1	chr1	155160193	-	MUC1	chr1	155160771	+
5CDS-intron	ENST00000368393	ENST00000368392	MUC1	chr1	155160193	-	MUC1	chr1	155160771	+
5CDS-intron	ENST00000368393	ENST00000368393	MUC1	chr1	155160193	-	MUC1	chr1	155160771	+
5CDS-intron	ENST00000368393	ENST00000368390	MUC1	chr1	155160193	-	MUC1	chr1	155160771	+
5CDS-intron	ENST00000368393	ENST00000368396	MUC1	chr1	155160193	-	MUC1	chr1	155160771	+
5CDS-intron	ENST00000368393	ENST00000343256	MUC1	chr1	155160193	-	MUC1	chr1	155160771	+
5CDS-intron	ENST00000368393	ENST00000368398	MUC1	chr1	155160193	-	MUC1	chr1	155160771	+
5CDS-intron	ENST00000368393	ENST00000368389	MUC1	chr1	155160193	-	MUC1	chr1	155160771	+
5CDS-intron	ENST00000368393	ENST00000342482	MUC1	chr1	155160193	-	MUC1	chr1	155160771	+
5CDS-intron	ENST00000368393	ENST00000337604	MUC1	chr1	155160193	-	MUC1	chr1	155160771	+
Frame-shit	ENST00000368390	ENST00000368395	MUC1	chr1	155160193	-	MUC1	chr1	155160771	+
5CDS-intron	ENST00000368390	ENST00000338684	MUC1	chr1	155160193	-	MUC1	chr1	155160771	+
5CDS-intron	ENST00000368390	ENST00000438413	MUC1	chr1	155160193	-	MUC1	chr1	155160771	+
5CDS-intron	ENST00000368390	ENST00000457295	MUC1	chr1	155160193	-	MUC1	chr1	155160771	+
5CDS-intron	ENST00000368390	ENST00000462215	MUC1	chr1	155160193	-	MUC1	chr1	155160771	+
5CDS-intron	ENST00000368390	ENST00000368392	MUC1	chr1	155160193	-	MUC1	chr1	155160771	+
5CDS-intron	ENST00000368390	ENST00000368393	MUC1	chr1	155160193	-	MUC1	chr1	155160771	+
5CDS-intron	ENST00000368390	ENST00000368390	MUC1	chr1	155160193	-	MUC1	chr1	155160771	+
5CDS-intron	ENST00000368390	ENST00000368396	MUC1	chr1	155160193	-	MUC1	chr1	155160771	+
5CDS-intron	ENST00000368390	ENST00000343256	MUC1	chr1	155160193	-	MUC1	chr1	155160771	+
5CDS-intron	ENST00000368390	ENST00000368398	MUC1	chr1	155160193	-	MUC1	chr1	155160771	+
5CDS-intron	ENST00000368390	ENST00000368389	MUC1	chr1	155160193	-	MUC1	chr1	155160771	+
5CDS-intron	ENST00000368390	ENST00000342482	MUC1	chr1	155160193	-	MUC1	chr1	155160771	+
5CDS-intron	ENST00000368390	ENST00000337604	MUC1	chr1	155160193	-	MUC1	chr1	155160771	+
intron-3CDS	ENST00000368396	ENST00000368395	MUC1	chr1	155160193	-	MUC1	chr1	155160771	+
intron-intron	ENST00000368396	ENST00000338684	MUC1	chr1	155160193	-	MUC1	chr1	155160771	+
intron-intron	ENST00000368396	ENST00000438413	MUC1	chr1	155160193	-	MUC1	chr1	155160771	+
intron-intron	ENST00000368396	ENST00000457295	MUC1	chr1	155160193	-	MUC1	chr1	155160771	+
intron-intron	ENST00000368396	ENST00000462215	MUC1	chr1	155160193	-	MUC1	chr1	155160771	+
intron-intron	ENST00000368396	ENST00000368392	MUC1	chr1	155160193	-	MUC1	chr1	155160771	+
intron-intron	ENST00000368396	ENST00000368393	MUC1	chr1	155160193	-	MUC1	chr1	155160771	+
intron-intron	ENST00000368396	ENST00000368390	MUC1	chr1	155160193	-	MUC1	chr1	155160771	+
intron-intron	ENST00000368396	ENST00000368396	MUC1	chr1	155160193	-	MUC1	chr1	155160771	+
intron-intron	ENST00000368396	ENST00000343256	MUC1	chr1	155160193	-	MUC1	chr1	155160771	+
intron-intron	ENST00000368396	ENST00000368398	MUC1	chr1	155160193	-	MUC1	chr1	155160771	+
intron-intron	ENST00000368396	ENST00000368389	MUC1	chr1	155160193	-	MUC1	chr1	155160771	+
intron-intron	ENST00000368396	ENST00000342482	MUC1	chr1	155160193	-	MUC1	chr1	155160771	+
intron-intron	ENST00000368396	ENST00000337604	MUC1	chr1	155160193	-	MUC1	chr1	155160771	+
intron-3CDS	ENST00000343256	ENST00000368395	MUC1	chr1	155160193	-	MUC1	chr1	155160771	+
intron-intron	ENST00000343256	ENST00000338684	MUC1	chr1	155160193	-	MUC1	chr1	155160771	+
intron-intron	ENST00000343256	ENST00000438413	MUC1	chr1	155160193	-	MUC1	chr1	155160771	+
intron-intron	ENST00000343256	ENST00000457295	MUC1	chr1	155160193	-	MUC1	chr1	155160771	+
intron-intron	ENST00000343256	ENST00000462215	MUC1	chr1	155160193	-	MUC1	chr1	155160771	+
intron-intron	ENST00000343256	ENST00000368392	MUC1	chr1	155160193	-	MUC1	chr1	155160771	+
intron-intron	ENST00000343256	ENST00000368393	MUC1	chr1	155160193	-	MUC1	chr1	155160771	+
intron-intron	ENST00000343256	ENST00000368390	MUC1	chr1	155160193	-	MUC1	chr1	155160771	+
intron-intron	ENST00000343256	ENST00000368396	MUC1	chr1	155160193	-	MUC1	chr1	155160771	+
intron-intron	ENST00000343256	ENST00000343256	MUC1	chr1	155160193	-	MUC1	chr1	155160771	+
intron-intron	ENST00000343256	ENST00000368398	MUC1	chr1	155160193	-	MUC1	chr1	155160771	+
intron-intron	ENST00000343256	ENST00000368389	MUC1	chr1	155160193	-	MUC1	chr1	155160771	+
intron-intron	ENST00000343256	ENST00000342482	MUC1	chr1	155160193	-	MUC1	chr1	155160771	+
intron-intron	ENST00000343256	ENST00000337604	MUC1	chr1	155160193	-	MUC1	chr1	155160771	+
Frame-shit	ENST00000368398	ENST00000368395	MUC1	chr1	155160193	-	MUC1	chr1	155160771	+
5CDS-intron	ENST00000368398	ENST00000338684	MUC1	chr1	155160193	-	MUC1	chr1	155160771	+
5CDS-intron	ENST00000368398	ENST00000438413	MUC1	chr1	155160193	-	MUC1	chr1	155160771	+
5CDS-intron	ENST00000368398	ENST00000457295	MUC1	chr1	155160193	-	MUC1	chr1	155160771	+
5CDS-intron	ENST00000368398	ENST00000462215	MUC1	chr1	155160193	-	MUC1	chr1	155160771	+
5CDS-intron	ENST00000368398	ENST00000368392	MUC1	chr1	155160193	-	MUC1	chr1	155160771	+
5CDS-intron	ENST00000368398	ENST00000368393	MUC1	chr1	155160193	-	MUC1	chr1	155160771	+
5CDS-intron	ENST00000368398	ENST00000368390	MUC1	chr1	155160193	-	MUC1	chr1	155160771	+
5CDS-intron	ENST00000368398	ENST00000368396	MUC1	chr1	155160193	-	MUC1	chr1	155160771	+
5CDS-intron	ENST00000368398	ENST00000343256	MUC1	chr1	155160193	-	MUC1	chr1	155160771	+
5CDS-intron	ENST00000368398	ENST00000368398	MUC1	chr1	155160193	-	MUC1	chr1	155160771	+
5CDS-intron	ENST00000368398	ENST00000368389	MUC1	chr1	155160193	-	MUC1	chr1	155160771	+
5CDS-intron	ENST00000368398	ENST00000342482	MUC1	chr1	155160193	-	MUC1	chr1	155160771	+
5CDS-intron	ENST00000368398	ENST00000337604	MUC1	chr1	155160193	-	MUC1	chr1	155160771	+
intron-3CDS	ENST00000368389	ENST00000368395	MUC1	chr1	155160193	-	MUC1	chr1	155160771	+
intron-intron	ENST00000368389	ENST00000338684	MUC1	chr1	155160193	-	MUC1	chr1	155160771	+
intron-intron	ENST00000368389	ENST00000438413	MUC1	chr1	155160193	-	MUC1	chr1	155160771	+
intron-intron	ENST00000368389	ENST00000457295	MUC1	chr1	155160193	-	MUC1	chr1	155160771	+
intron-intron	ENST00000368389	ENST00000462215	MUC1	chr1	155160193	-	MUC1	chr1	155160771	+
intron-intron	ENST00000368389	ENST00000368392	MUC1	chr1	155160193	-	MUC1	chr1	155160771	+
intron-intron	ENST00000368389	ENST00000368393	MUC1	chr1	155160193	-	MUC1	chr1	155160771	+
intron-intron	ENST00000368389	ENST00000368390	MUC1	chr1	155160193	-	MUC1	chr1	155160771	+
intron-intron	ENST00000368389	ENST00000368396	MUC1	chr1	155160193	-	MUC1	chr1	155160771	+
intron-intron	ENST00000368389	ENST00000343256	MUC1	chr1	155160193	-	MUC1	chr1	155160771	+
intron-intron	ENST00000368389	ENST00000368398	MUC1	chr1	155160193	-	MUC1	chr1	155160771	+
intron-intron	ENST00000368389	ENST00000368389	MUC1	chr1	155160193	-	MUC1	chr1	155160771	+
intron-intron	ENST00000368389	ENST00000342482	MUC1	chr1	155160193	-	MUC1	chr1	155160771	+
intron-intron	ENST00000368389	ENST00000337604	MUC1	chr1	155160193	-	MUC1	chr1	155160771	+
intron-3CDS	ENST00000342482	ENST00000368395	MUC1	chr1	155160193	-	MUC1	chr1	155160771	+
intron-intron	ENST00000342482	ENST00000338684	MUC1	chr1	155160193	-	MUC1	chr1	155160771	+
intron-intron	ENST00000342482	ENST00000438413	MUC1	chr1	155160193	-	MUC1	chr1	155160771	+
intron-intron	ENST00000342482	ENST00000457295	MUC1	chr1	155160193	-	MUC1	chr1	155160771	+
intron-intron	ENST00000342482	ENST00000462215	MUC1	chr1	155160193	-	MUC1	chr1	155160771	+
intron-intron	ENST00000342482	ENST00000368392	MUC1	chr1	155160193	-	MUC1	chr1	155160771	+
intron-intron	ENST00000342482	ENST00000368393	MUC1	chr1	155160193	-	MUC1	chr1	155160771	+
intron-intron	ENST00000342482	ENST00000368390	MUC1	chr1	155160193	-	MUC1	chr1	155160771	+
intron-intron	ENST00000342482	ENST00000368396	MUC1	chr1	155160193	-	MUC1	chr1	155160771	+
intron-intron	ENST00000342482	ENST00000343256	MUC1	chr1	155160193	-	MUC1	chr1	155160771	+
intron-intron	ENST00000342482	ENST00000368398	MUC1	chr1	155160193	-	MUC1	chr1	155160771	+
intron-intron	ENST00000342482	ENST00000368389	MUC1	chr1	155160193	-	MUC1	chr1	155160771	+
intron-intron	ENST00000342482	ENST00000342482	MUC1	chr1	155160193	-	MUC1	chr1	155160771	+
intron-intron	ENST00000342482	ENST00000337604	MUC1	chr1	155160193	-	MUC1	chr1	155160771	+
Frame-shit	ENST00000337604	ENST00000368395	MUC1	chr1	155160193	-	MUC1	chr1	155160771	+
5CDS-intron	ENST00000337604	ENST00000338684	MUC1	chr1	155160193	-	MUC1	chr1	155160771	+
5CDS-intron	ENST00000337604	ENST00000438413	MUC1	chr1	155160193	-	MUC1	chr1	155160771	+
5CDS-intron	ENST00000337604	ENST00000457295	MUC1	chr1	155160193	-	MUC1	chr1	155160771	+
5CDS-intron	ENST00000337604	ENST00000462215	MUC1	chr1	155160193	-	MUC1	chr1	155160771	+
5CDS-intron	ENST00000337604	ENST00000368392	MUC1	chr1	155160193	-	MUC1	chr1	155160771	+
5CDS-intron	ENST00000337604	ENST00000368393	MUC1	chr1	155160193	-	MUC1	chr1	155160771	+
5CDS-intron	ENST00000337604	ENST00000368390	MUC1	chr1	155160193	-	MUC1	chr1	155160771	+
5CDS-intron	ENST00000337604	ENST00000368396	MUC1	chr1	155160193	-	MUC1	chr1	155160771	+
5CDS-intron	ENST00000337604	ENST00000343256	MUC1	chr1	155160193	-	MUC1	chr1	155160771	+
5CDS-intron	ENST00000337604	ENST00000368398	MUC1	chr1	155160193	-	MUC1	chr1	155160771	+
5CDS-intron	ENST00000337604	ENST00000368389	MUC1	chr1	155160193	-	MUC1	chr1	155160771	+
5CDS-intron	ENST00000337604	ENST00000342482	MUC1	chr1	155160193	-	MUC1	chr1	155160771	+
5CDS-intron	ENST00000337604	ENST00000337604	MUC1	chr1	155160193	-	MUC1	chr1	155160771	+

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FusionProtFeatures for MUC1_MUC1

Main function of each fusion partner protein. (from UniProt)

Hgene	Tgene
MUC1 P15941	MUC1 P15941

Retention analysis result of each fusion partner protein across 39 protein features of UniProt such as six molecule processing features, 13 region features, four site features, six amino acid modification features, two natural variation features, five experimental info features, and 3 secondary structure features. Here, because of limited space for viewing, we only show the protein feature retention information belong to the 13 regional features. All retention annotation result can be downloaded at
download page
.

* Minus value of BPloci means that the break pointn is located before the CDS.

- In-frame and retained protein feature among the 13 regional features.

Partner

Gene

Hbp

Tbp

ENST

Strand

BPexon

TotalExon

Protein feature loci

*BPloci

TotalLen

Protein feature

Protein feature note

- In-frame and not-retained protein feature among the 13 regional features.

Partner

Gene

Hbp

Tbp

ENST

Strand

BPexon

TotalExon

Protein feature loci

*BPloci

TotalLen

Protein feature

Protein feature note

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FusionGeneSequence for MUC1_MUC1

For in-frame fusion transcripts, we provide the fusion transcript sequences and fusion amino acid sequences.
(nt: nucleotides, aa: amino acids)

* Fusion amino acid sequences.

* Fusion transcript sequences (only coding sequence (CDS) region).

* Fusion transcript sequences (Full-length transcript).

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FusionGenePPI for MUC1_MUC1

Go to ChiPPI (Chimeric Protein-Protein interactions) to see the chimeric PPI interaction in
ChiPPI page
.

Protein-protein interactors with each fusion partner protein in wild-type (BIOGRID-3.4.160)

Hgene

Hgene's interactors

Tgene

Tgene's interactors

- Retained PPIs in in-frame fusion.

Partner

Gene

Hbp

Tbp

ENST

Strand

BPexon

TotalExon

Protein feature loci

*BPloci

TotalLen

Still interaction with

- Lost PPIs in in-frame fusion.

Partner

Gene

Hbp

Tbp

ENST

Strand

BPexon

TotalExon

Protein feature loci

*BPloci

TotalLen

Interaction lost with

- Retained PPIs, but lost function due to frame-shift fusion.

Partner

Gene

Hbp

Tbp

ENST

Strand

BPexon

TotalExon

Protein feature loci

*BPloci

TotalLen

Interaction lost with

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RelatedDrugs for MUC1_MUC1

Drugs targeting genes involved in this fusion gene.
(DrugBank Version 5.1.0 2018-04-02)

Partner

Gene

UniProtAcc

DrugBank ID

Drug name

Drug activity

Drug type

Drug status

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RelatedDiseases for MUC1_MUC1

Diseases associated with fusion partners.
(DisGeNet 4.0)

Partner	Gene	Disease ID	Disease name	# pubmeds	Source
Hgene	MUC1	C0007621	Neoplastic Cell Transformation	1	CTD_human
Hgene	MUC1	C0025500	Mesothelioma	1	CTD_human
Hgene	MUC1	C0026764	Multiple Myeloma	1	CTD_human
Hgene	MUC1	C0031149	Peritoneal Neoplasms	1	CTD_human
Hgene	MUC1	C0038356	Stomach Neoplasms	1	CTD_human
Hgene	MUC1	C0345967	Malignant mesothelioma	1	CTD_human
Hgene	MUC1	C1868139	Medullary cystic kidney disease 1	1	CTD_human
Tgene	MUC1	C0007621	Neoplastic Cell Transformation	1	CTD_human
Tgene	MUC1	C0025500	Mesothelioma	1	CTD_human
Tgene	MUC1	C0026764	Multiple Myeloma	1	CTD_human
Tgene	MUC1	C0031149	Peritoneal Neoplasms	1	CTD_human
Tgene	MUC1	C0038356	Stomach Neoplasms	1	CTD_human
Tgene	MUC1	C0345967	Malignant mesothelioma	1	CTD_human
Tgene	MUC1	C1868139	Medullary cystic kidney disease 1	1	CTD_human

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Fusion gene ID: 22873

FusionGeneSummary for MUC1_MUC1

FusionProtFeatures for MUC1_MUC1

FusionGeneSequence for MUC1_MUC1

FusionGenePPI for MUC1_MUC1

RelatedDrugs for MUC1_MUC1

RelatedDiseases for MUC1_MUC1