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Center for Computational Systems Medicine
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FusionGeneSummary

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FusionProtFeature

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FusionGeneSequence

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FusionGenePPI

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RelatedDrugs

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RelatedDiseases

Fusion gene ID: 21947

FusionGeneSummary for MIEN1_WIPF2

check button Fusion gene summary
Fusion gene informationFusion gene name: MIEN1_WIPF2
Fusion gene ID: 21947
HgeneTgene
Gene symbol

MIEN1

WIPF2

Gene ID

84299

147179

Gene namemigration and invasion enhancer 1WAS/WASL interacting protein family member 2
SynonymsC17orf37|C35|ORB3|RDX12|XTP4WICH|WIRE
Cytomap

17q12

17q21.2

Type of geneprotein-codingprotein-coding
Descriptionmigration and invasion enhancer 1HBV X-transactivated gene 4 proteinHBV XAg-transactivated protein 4protein C17orf37WAS/WASL-interacting protein family member 2WASP-binding proteinWASP-interacting protein-related proteinWIP- and CR16-homologous proteinWIP-related protein
Modification date2018052320180523
UniProtAcc

Q9BRT3

Q8TF74

Ensembl transtripts involved in fusion geneENST00000474210, ENST00000394231, 
ENST00000577810, 
ENST00000494757, 
ENST00000323571, ENST00000585043, 
ENST00000394103, ENST00000536600, 
ENST00000583130, 
Fusion gene scores* DoF score4 X 3 X 4=4811 X 5 X 5=275
# samples 511
** MAII scorelog2(5/48*10)=0.0588936890535686
effective Gene in Pan-Cancer Fusion Genes (eGinPCFGs).
DoF>8 and MAII>0
log2(11/275*10)=-1.32192809488736
possibly effective Gene in Pan-Cancer Fusion Genes (peGinPCFGs).
DoF>8 and MAII<0
Context

PubMed: MIEN1 [Title/Abstract] AND WIPF2 [Title/Abstract] AND fusion [Title/Abstract]

Functional or gene categories assigned by FusionGDB annotation
* DoF score (Degree of Frequency) = # partners X # break points X # cancer types
** MAII score (Major Active Isofusion Index) = log2(# samples/DoF score*10)

check button Gene ontology of each fusion partner gene with evidence of Inferred from Direct Assay (IDA) from Entrez
PartnerGeneGO IDGO termPubMed ID
HgeneMIEN1

GO:0030335

positive regulation of cell migration

21628459

HgeneMIEN1

GO:0043066

negative regulation of apoptotic process

21068479

HgeneMIEN1

GO:0051491

positive regulation of filopodium assembly

21628459


check button Fusion gene information from three resources
(ChiTars (NAR, 2018), tumorfusions (NAR, 2018), Gao et al. (Cell, 2018))
* All genome coordinats were lifted-over on hg19.
* Click on the break point to see the gene structure around the break point region using the UCSC Genome Browser.
Data typeSourceCancer typeSampleHgeneHchrHbpHstrandTgeneTchrTbpTstrand
TCGALDOVTCGA-30-1853-01AMIEN1chr17

37886447

-WIPF2chr17

38412643

+
* LD: Li Ding group's fusion gene list
  RV: Roel Verhaak group's fusion gene list
  ChiTaRs fusion database

check button Open reading frame (ORF) analsis of fusion genes based on Ensembl gene isoform structure.
* Click on the break point to see the gene structure around the break point region using the UCSC Genome Browser.
ORFHenstTenstHgeneHchrHbpHstrandTgeneTchrTbpTstrand
intron-intronENST00000474210ENST00000494757MIEN1chr17

37886447

-WIPF2chr17

38412643

+
intron-5UTRENST00000474210ENST00000323571MIEN1chr17

37886447

-WIPF2chr17

38412643

+
intron-5UTRENST00000474210ENST00000585043MIEN1chr17

37886447

-WIPF2chr17

38412643

+
intron-5UTRENST00000474210ENST00000394103MIEN1chr17

37886447

-WIPF2chr17

38412643

+
intron-5UTRENST00000474210ENST00000536600MIEN1chr17

37886447

-WIPF2chr17

38412643

+
intron-5UTRENST00000474210ENST00000583130MIEN1chr17

37886447

-WIPF2chr17

38412643

+
5CDS-intronENST00000394231ENST00000494757MIEN1chr17

37886447

-WIPF2chr17

38412643

+
5CDS-5UTRENST00000394231ENST00000323571MIEN1chr17

37886447

-WIPF2chr17

38412643

+
5CDS-5UTRENST00000394231ENST00000585043MIEN1chr17

37886447

-WIPF2chr17

38412643

+
5CDS-5UTRENST00000394231ENST00000394103MIEN1chr17

37886447

-WIPF2chr17

38412643

+
5CDS-5UTRENST00000394231ENST00000536600MIEN1chr17

37886447

-WIPF2chr17

38412643

+
5CDS-5UTRENST00000394231ENST00000583130MIEN1chr17

37886447

-WIPF2chr17

38412643

+
5CDS-intronENST00000577810ENST00000494757MIEN1chr17

37886447

-WIPF2chr17

38412643

+
5CDS-5UTRENST00000577810ENST00000323571MIEN1chr17

37886447

-WIPF2chr17

38412643

+
5CDS-5UTRENST00000577810ENST00000585043MIEN1chr17

37886447

-WIPF2chr17

38412643

+
5CDS-5UTRENST00000577810ENST00000394103MIEN1chr17

37886447

-WIPF2chr17

38412643

+
5CDS-5UTRENST00000577810ENST00000536600MIEN1chr17

37886447

-WIPF2chr17

38412643

+
5CDS-5UTRENST00000577810ENST00000583130MIEN1chr17

37886447

-WIPF2chr17

38412643

+

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FusionProtFeatures for MIEN1_WIPF2


check buttonMain function of each fusion partner protein. (from UniProt)
HgeneTgene
MIEN1

Q9BRT3

WIPF2

Q8TF74

Increases cell migration by inducing filopodia formationat the leading edge of migrating cells. Plays a role in regulationof apoptosis, possibly through control of CASP3. May be involvedin a redox-related process. {ECO:0000269|PubMed:19503095,ECO:0000269|PubMed:21628459}. Plays an active role in the formation of cell surfaceprotrusions downstream of activated PDGFB receptors. Plays animportant role in actin-microspike formation through cooperationwith WASL. May cooperate with WASP and WASL to induce mobilizationand reorganization of the actin filament system.{ECO:0000269|PubMed:11829459, ECO:0000269|PubMed:12213210}.

check buttonRetention analysis result of each fusion partner protein across 39 protein features of UniProt such as six molecule processing features, 13 region features, four site features, six amino acid modification features, two natural variation features, five experimental info features, and 3 secondary structure features. Here, because of limited space for viewing, we only show the protein feature retention information belong to the 13 regional features. All retention annotation result can be downloaded at

download page

.

* Minus value of BPloci means that the break pointn is located before the CDS.
- In-frame and retained protein feature among the 13 regional features.
PartnerGeneHbpTbpENSTStrandBPexonTotalExonProtein feature loci*BPlociTotalLenProtein featureProtein feature note

- In-frame and not-retained protein feature among the 13 regional features.
PartnerGeneHbpTbpENSTStrandBPexonTotalExonProtein feature loci*BPlociTotalLenProtein featureProtein feature note


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FusionGeneSequence for MIEN1_WIPF2


check button For in-frame fusion transcripts, we provide the fusion transcript sequences and fusion amino acid sequences.
(nt: nucleotides, aa: amino acids)

* Fusion amino acid sequences.

* Fusion transcript sequences (only coding sequence (CDS) region).

* Fusion transcript sequences (Full-length transcript).

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FusionGenePPI for MIEN1_WIPF2


check button Go to ChiPPI (Chimeric Protein-Protein interactions) to see the chimeric PPI interaction in

ChiPPI page

.

check button Protein-protein interactors with each fusion partner protein in wild-type (BIOGRID-3.4.160)
HgeneHgene's interactorsTgeneTgene's interactors
MIEN1REL, MOV10, NXF1, SCCPDH, NLGN3WIPF2DNMBP, WAS, NCK2, GRB2, ITSN2, SH3KBP1, WASL, EIF4A3, TXLNG, SLC4A1AP, HNRNPDL, ZFAND5, ZNF830, TCERG1, APBB1, WWOX, PACSIN2, NCK1, CDH1, TRIM25


check button - Retained PPIs in in-frame fusion.
PartnerGeneHbpTbpENSTStrandBPexonTotalExonProtein feature loci*BPlociTotalLenStill interaction with


check button - Lost PPIs in in-frame fusion.
PartnerGeneHbpTbpENSTStrandBPexonTotalExonProtein feature loci*BPlociTotalLenInteraction lost with


check button - Retained PPIs, but lost function due to frame-shift fusion.
PartnerGeneHbpTbpENSTStrandBPexonTotalExonProtein feature loci*BPlociTotalLenInteraction lost with


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RelatedDrugs for MIEN1_WIPF2


check button Drugs targeting genes involved in this fusion gene.
(DrugBank Version 5.1.0 2018-04-02)
PartnerGeneUniProtAccDrugBank IDDrug nameDrug activityDrug typeDrug status

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RelatedDiseases for MIEN1_WIPF2


check button Diseases associated with fusion partners.
(DisGeNet 4.0)
PartnerGeneDisease IDDisease name# pubmedsSource