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Fusion gene ID: 21330 |
FusionGeneSummary for MCRS1_MCRS1 |
 Fusion gene summary |
| Fusion gene information | Fusion gene name: MCRS1_MCRS1 | Fusion gene ID: 21330 | Hgene | Tgene | Gene symbol | MCRS1 | MCRS1 | Gene ID | 10445 | 10445 |
| Gene name | microspherule protein 1 | microspherule protein 1 | |
| Synonyms | ICP22BP|INO80Q|MCRS2|MSP58|P78 | ICP22BP|INO80Q|MCRS2|MSP58|P78 | |
| Cytomap | 12q13.12 | 12q13.12 | |
| Type of gene | protein-coding | protein-coding | |
| Description | microspherule protein 158 kDa microspherule proteinINO80 complex subunit JINO80 complex subunit Qcell cycle-regulated factor (78 kDa)cell cycle-regulated factor p78 | microspherule protein 158 kDa microspherule proteinINO80 complex subunit JINO80 complex subunit Qcell cycle-regulated factor (78 kDa)cell cycle-regulated factor p78 | |
| Modification date | 20180523 | 20180523 | |
| UniProtAcc | Q96EZ8 | Q96EZ8 | |
| Ensembl transtripts involved in fusion gene | ENST00000546244, ENST00000343810, ENST00000550165, ENST00000547182, ENST00000357123, | ENST00000546244, ENST00000343810, ENST00000550165, ENST00000547182, ENST00000357123, | |
| Fusion gene scores | * DoF score | 4 X 4 X 3=48 | 3 X 4 X 3=36 |
| # samples | 5 | 4 | |
| ** MAII score | log2(5/48*10)=0.0588936890535686 effective Gene in Pan-Cancer Fusion Genes (eGinPCFGs). DoF>8 and MAII>0 | log2(4/36*10)=0.15200309344505 effective Gene in Pan-Cancer Fusion Genes (eGinPCFGs). DoF>8 and MAII>0 | |
| Context | PubMed: MCRS1 [Title/Abstract] AND MCRS1 [Title/Abstract] AND fusion [Title/Abstract] | ||
| Functional or gene categories assigned by FusionGDB annotation | |||
| * DoF score (Degree of Frequency) = # partners X # break points X # cancer types ** MAII score (Major Active Isofusion Index) = log2(# samples/DoF score*10) |
| Gene ontology of each fusion partner gene with evidence of Inferred from Direct Assay (IDA) from Entrez |
| Partner | Gene | GO ID | GO term | PubMed ID |
| Hgene | MCRS1 | GO:0043981 | histone H4-K5 acetylation | 20018852 |
| Hgene | MCRS1 | GO:0043982 | histone H4-K8 acetylation | 20018852 |
| Hgene | MCRS1 | GO:0043984 | histone H4-K16 acetylation | 20018852 |
| Hgene | MCRS1 | GO:1904751 | positive regulation of protein localization to nucleolus | 16571602 |
| Tgene | MCRS1 | GO:0043981 | histone H4-K5 acetylation | 20018852 |
| Tgene | MCRS1 | GO:0043982 | histone H4-K8 acetylation | 20018852 |
| Tgene | MCRS1 | GO:0043984 | histone H4-K16 acetylation | 20018852 |
| Tgene | MCRS1 | GO:1904751 | positive regulation of protein localization to nucleolus | 16571602 |
| Fusion gene information from three resources (ChiTars (NAR, 2018), tumorfusions (NAR, 2018), Gao et al. (Cell, 2018)) * All genome coordinats were lifted-over on hg19. * Click on the break point to see the gene structure around the break point region using the UCSC Genome Browser. |
| Data type | Source | Cancer type | Sample | Hgene | Hchr | Hbp | Hstrand | Tgene | Tchr | Tbp | Tstrand |
| ChiTaRS3.1 | AW878083 | MCRS1 | chr12 | 49952446 | - | MCRS1 | chr12 | 49952502 | + | ||
| ChiTaRS3.1 | W26888 | MCRS1 | chr12 | 49953262 | + | MCRS1 | chr12 | 49961911 | - |
| * LD: Li Ding group's fusion gene list RV: Roel Verhaak group's fusion gene list ChiTaRs fusion database |
| Open reading frame (ORF) analsis of fusion genes based on Ensembl gene isoform structure. * Click on the break point to see the gene structure around the break point region using the UCSC Genome Browser. |
| ORF | Henst | Tenst | Hgene | Hchr | Hbp | Hstrand | Tgene | Tchr | Tbp | Tstrand |
| intron-3CDS | ENST00000546244 | ENST00000546244 | MCRS1 | chr12 | 49952446 | - | MCRS1 | chr12 | 49952502 | + |
| intron-3CDS | ENST00000546244 | ENST00000343810 | MCRS1 | chr12 | 49952446 | - | MCRS1 | chr12 | 49952502 | + |
| intron-3CDS | ENST00000546244 | ENST00000550165 | MCRS1 | chr12 | 49952446 | - | MCRS1 | chr12 | 49952502 | + |
| intron-5UTR | ENST00000546244 | ENST00000547182 | MCRS1 | chr12 | 49952446 | - | MCRS1 | chr12 | 49952502 | + |
| intron-5UTR | ENST00000546244 | ENST00000357123 | MCRS1 | chr12 | 49952446 | - | MCRS1 | chr12 | 49952502 | + |
| intron-3CDS | ENST00000343810 | ENST00000546244 | MCRS1 | chr12 | 49952446 | - | MCRS1 | chr12 | 49952502 | + |
| intron-3CDS | ENST00000343810 | ENST00000343810 | MCRS1 | chr12 | 49952446 | - | MCRS1 | chr12 | 49952502 | + |
| intron-3CDS | ENST00000343810 | ENST00000550165 | MCRS1 | chr12 | 49952446 | - | MCRS1 | chr12 | 49952502 | + |
| intron-5UTR | ENST00000343810 | ENST00000547182 | MCRS1 | chr12 | 49952446 | - | MCRS1 | chr12 | 49952502 | + |
| intron-5UTR | ENST00000343810 | ENST00000357123 | MCRS1 | chr12 | 49952446 | - | MCRS1 | chr12 | 49952502 | + |
| intron-3CDS | ENST00000550165 | ENST00000546244 | MCRS1 | chr12 | 49952446 | - | MCRS1 | chr12 | 49952502 | + |
| intron-3CDS | ENST00000550165 | ENST00000343810 | MCRS1 | chr12 | 49952446 | - | MCRS1 | chr12 | 49952502 | + |
| intron-3CDS | ENST00000550165 | ENST00000550165 | MCRS1 | chr12 | 49952446 | - | MCRS1 | chr12 | 49952502 | + |
| intron-5UTR | ENST00000550165 | ENST00000547182 | MCRS1 | chr12 | 49952446 | - | MCRS1 | chr12 | 49952502 | + |
| intron-5UTR | ENST00000550165 | ENST00000357123 | MCRS1 | chr12 | 49952446 | - | MCRS1 | chr12 | 49952502 | + |
| intron-3CDS | ENST00000547182 | ENST00000546244 | MCRS1 | chr12 | 49952446 | - | MCRS1 | chr12 | 49952502 | + |
| intron-3CDS | ENST00000547182 | ENST00000343810 | MCRS1 | chr12 | 49952446 | - | MCRS1 | chr12 | 49952502 | + |
| intron-3CDS | ENST00000547182 | ENST00000550165 | MCRS1 | chr12 | 49952446 | - | MCRS1 | chr12 | 49952502 | + |
| intron-5UTR | ENST00000547182 | ENST00000547182 | MCRS1 | chr12 | 49952446 | - | MCRS1 | chr12 | 49952502 | + |
| intron-5UTR | ENST00000547182 | ENST00000357123 | MCRS1 | chr12 | 49952446 | - | MCRS1 | chr12 | 49952502 | + |
| intron-3CDS | ENST00000357123 | ENST00000546244 | MCRS1 | chr12 | 49952446 | - | MCRS1 | chr12 | 49952502 | + |
| intron-3CDS | ENST00000357123 | ENST00000343810 | MCRS1 | chr12 | 49952446 | - | MCRS1 | chr12 | 49952502 | + |
| intron-3CDS | ENST00000357123 | ENST00000550165 | MCRS1 | chr12 | 49952446 | - | MCRS1 | chr12 | 49952502 | + |
| intron-5UTR | ENST00000357123 | ENST00000547182 | MCRS1 | chr12 | 49952446 | - | MCRS1 | chr12 | 49952502 | + |
| intron-5UTR | ENST00000357123 | ENST00000357123 | MCRS1 | chr12 | 49952446 | - | MCRS1 | chr12 | 49952502 | + |
| intron-3CDS | ENST00000546244 | ENST00000546244 | MCRS1 | chr12 | 49953262 | + | MCRS1 | chr12 | 49961911 | - |
| intron-5UTR | ENST00000546244 | ENST00000343810 | MCRS1 | chr12 | 49953262 | + | MCRS1 | chr12 | 49961911 | - |
| intron-intron | ENST00000546244 | ENST00000550165 | MCRS1 | chr12 | 49953262 | + | MCRS1 | chr12 | 49961911 | - |
| intron-intron | ENST00000546244 | ENST00000547182 | MCRS1 | chr12 | 49953262 | + | MCRS1 | chr12 | 49961911 | - |
| intron-intron | ENST00000546244 | ENST00000357123 | MCRS1 | chr12 | 49953262 | + | MCRS1 | chr12 | 49961911 | - |
| intron-3CDS | ENST00000343810 | ENST00000546244 | MCRS1 | chr12 | 49953262 | + | MCRS1 | chr12 | 49961911 | - |
| intron-5UTR | ENST00000343810 | ENST00000343810 | MCRS1 | chr12 | 49953262 | + | MCRS1 | chr12 | 49961911 | - |
| intron-intron | ENST00000343810 | ENST00000550165 | MCRS1 | chr12 | 49953262 | + | MCRS1 | chr12 | 49961911 | - |
| intron-intron | ENST00000343810 | ENST00000547182 | MCRS1 | chr12 | 49953262 | + | MCRS1 | chr12 | 49961911 | - |
| intron-intron | ENST00000343810 | ENST00000357123 | MCRS1 | chr12 | 49953262 | + | MCRS1 | chr12 | 49961911 | - |
| intron-3CDS | ENST00000550165 | ENST00000546244 | MCRS1 | chr12 | 49953262 | + | MCRS1 | chr12 | 49961911 | - |
| intron-5UTR | ENST00000550165 | ENST00000343810 | MCRS1 | chr12 | 49953262 | + | MCRS1 | chr12 | 49961911 | - |
| intron-intron | ENST00000550165 | ENST00000550165 | MCRS1 | chr12 | 49953262 | + | MCRS1 | chr12 | 49961911 | - |
| intron-intron | ENST00000550165 | ENST00000547182 | MCRS1 | chr12 | 49953262 | + | MCRS1 | chr12 | 49961911 | - |
| intron-intron | ENST00000550165 | ENST00000357123 | MCRS1 | chr12 | 49953262 | + | MCRS1 | chr12 | 49961911 | - |
| intron-3CDS | ENST00000547182 | ENST00000546244 | MCRS1 | chr12 | 49953262 | + | MCRS1 | chr12 | 49961911 | - |
| intron-5UTR | ENST00000547182 | ENST00000343810 | MCRS1 | chr12 | 49953262 | + | MCRS1 | chr12 | 49961911 | - |
| intron-intron | ENST00000547182 | ENST00000550165 | MCRS1 | chr12 | 49953262 | + | MCRS1 | chr12 | 49961911 | - |
| intron-intron | ENST00000547182 | ENST00000547182 | MCRS1 | chr12 | 49953262 | + | MCRS1 | chr12 | 49961911 | - |
| intron-intron | ENST00000547182 | ENST00000357123 | MCRS1 | chr12 | 49953262 | + | MCRS1 | chr12 | 49961911 | - |
| intron-3CDS | ENST00000357123 | ENST00000546244 | MCRS1 | chr12 | 49953262 | + | MCRS1 | chr12 | 49961911 | - |
| intron-5UTR | ENST00000357123 | ENST00000343810 | MCRS1 | chr12 | 49953262 | + | MCRS1 | chr12 | 49961911 | - |
| intron-intron | ENST00000357123 | ENST00000550165 | MCRS1 | chr12 | 49953262 | + | MCRS1 | chr12 | 49961911 | - |
| intron-intron | ENST00000357123 | ENST00000547182 | MCRS1 | chr12 | 49953262 | + | MCRS1 | chr12 | 49961911 | - |
| intron-intron | ENST00000357123 | ENST00000357123 | MCRS1 | chr12 | 49953262 | + | MCRS1 | chr12 | 49961911 | - |
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FusionProtFeatures for MCRS1_MCRS1 |
| Main function of each fusion partner protein. (from UniProt) |
| Hgene | Tgene |
| MCRS1 | MCRS1 |
| Modulates the transcription repressor activity of DAXXby recruiting it to the nucleolus (PubMed:11948183). As part ofthe NSL complex it may be involved in acetylation of nucleosomalhistone H4 on several lysine residues (PubMed:20018852). Putativeregulatory component of the chromatin remodeling INO80 complexwhich is involved in transcriptional regulation, DNA replicationand probably DNA repair. May also be an inhibitor of TERTtelomerase activity (PubMed:15044100). Binds to G-quadruplexstructures in mRNA (PubMed:16571602). Binds to RNA homopolymerpoly(G) and poly(U) (PubMed:16571602).{ECO:0000269|PubMed:11948183, ECO:0000269|PubMed:15044100,ECO:0000269|PubMed:16571602, ECO:0000269|PubMed:20018852}. | Modulates the transcription repressor activity of DAXXby recruiting it to the nucleolus (PubMed:11948183). As part ofthe NSL complex it may be involved in acetylation of nucleosomalhistone H4 on several lysine residues (PubMed:20018852). Putativeregulatory component of the chromatin remodeling INO80 complexwhich is involved in transcriptional regulation, DNA replicationand probably DNA repair. May also be an inhibitor of TERTtelomerase activity (PubMed:15044100). Binds to G-quadruplexstructures in mRNA (PubMed:16571602). Binds to RNA homopolymerpoly(G) and poly(U) (PubMed:16571602).{ECO:0000269|PubMed:11948183, ECO:0000269|PubMed:15044100,ECO:0000269|PubMed:16571602, ECO:0000269|PubMed:20018852}. |
| Retention analysis result of each fusion partner protein across 39 protein features of UniProt such as six molecule processing features, 13 region features, four site features, six amino acid modification features, two natural variation features, five experimental info features, and 3 secondary structure features. Here, because of limited space for viewing, we only show the protein feature retention information belong to the 13 regional features. All retention annotation result can be downloaded at . * Minus value of BPloci means that the break pointn is located before the CDS. |
| - In-frame and retained protein feature among the 13 regional features. |
| Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Protein feature | Protein feature note |
| - In-frame and not-retained protein feature among the 13 regional features. |
| Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Protein feature | Protein feature note |
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FusionGeneSequence for MCRS1_MCRS1 |
| For in-frame fusion transcripts, we provide the fusion transcript sequences and fusion amino acid sequences. (nt: nucleotides, aa: amino acids) |
| * Fusion amino acid sequences. |
| * Fusion transcript sequences (only coding sequence (CDS) region). |
| * Fusion transcript sequences (Full-length transcript). |
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FusionGenePPI for MCRS1_MCRS1 |
| Go to ChiPPI (Chimeric Protein-Protein interactions) to see the chimeric PPI interaction in . |
| Protein-protein interactors with each fusion partner protein in wild-type (BIOGRID-3.4.160) |
| Hgene | Hgene's interactors | Tgene | Tgene's interactors |
| - Retained PPIs in in-frame fusion. |
| Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Still interaction with |
| - Lost PPIs in in-frame fusion. |
| Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Interaction lost with |
| - Retained PPIs, but lost function due to frame-shift fusion. |
| Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Interaction lost with |
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RelatedDrugs for MCRS1_MCRS1 |
| Drugs targeting genes involved in this fusion gene. (DrugBank Version 5.1.0 2018-04-02) |
| Partner | Gene | UniProtAcc | DrugBank ID | Drug name | Drug activity | Drug type | Drug status |
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RelatedDiseases for MCRS1_MCRS1 |
| Diseases associated with fusion partners. (DisGeNet 4.0) |
| Partner | Gene | Disease ID | Disease name | # pubmeds | Source |
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