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Fusion gene ID: 2126 |
FusionGeneSummary for APBB2_CCNB1 |
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Fusion gene information | Fusion gene name: APBB2_CCNB1 | Fusion gene ID: 2126 | Hgene | Tgene | Gene symbol | APBB2 | CCNB1 | Gene ID | 323 | 891 |
Gene name | amyloid beta precursor protein binding family B member 2 | cyclin B1 | |
Synonyms | FE65L|FE65L1 | CCNB | |
Cytomap | 4p14-p13 | 5q13.2 | |
Type of gene | protein-coding | protein-coding | |
Description | amyloid-beta A4 precursor protein-binding family B member 2Fe65-like 1protein Fe65-like 1 | G2/mitotic-specific cyclin-B1 | |
Modification date | 20180523 | 20180523 | |
UniProtAcc | Q92870 | P14635 | |
Ensembl transtripts involved in fusion gene | ENST00000295974, ENST00000513140, ENST00000508593, ENST00000506352, ENST00000511572, ENST00000543538, ENST00000502841, ENST00000504305, | ENST00000256442, | |
Fusion gene scores | * DoF score | 8 X 8 X 3=192 | 3 X 3 X 3=27 |
# samples | 8 | 3 | |
** MAII score | log2(8/192*10)=-1.26303440583379 possibly effective Gene in Pan-Cancer Fusion Genes (peGinPCFGs). DoF>8 and MAII<0 | log2(3/27*10)=0.15200309344505 effective Gene in Pan-Cancer Fusion Genes (eGinPCFGs). DoF>8 and MAII>0 | |
Context | PubMed: APBB2 [Title/Abstract] AND CCNB1 [Title/Abstract] AND fusion [Title/Abstract] | ||
Functional or gene categories assigned by FusionGDB annotation |
* DoF score (Degree of Frequency) = # partners X # break points X # cancer types ** MAII score (Major Active Isofusion Index) = log2(# samples/DoF score*10) |
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Partner | Gene | GO ID | GO term | PubMed ID |
Tgene | CCNB1 | GO:0010971 | positive regulation of G2/M transition of mitotic cell cycle | 24746669 |
Tgene | CCNB1 | GO:1905448 | positive regulation of mitochondrial ATP synthesis coupled electron transport | 24746669 |
![]() (ChiTars (NAR, 2018), tumorfusions (NAR, 2018), Gao et al. (Cell, 2018)) * All genome coordinats were lifted-over on hg19. * Click on the break point to see the gene structure around the break point region using the UCSC Genome Browser. |
Data type | Source | Cancer type | Sample | Hgene | Hchr | Hbp | Hstrand | Tgene | Tchr | Tbp | Tstrand |
ChiTaRS3.1 | BC018868 | APBB2 | chr4 | 40816464 | + | CCNB1 | chr5 | 68462964 | + |
* LD: Li Ding group's fusion gene list RV: Roel Verhaak group's fusion gene list ChiTaRs fusion database |
![]() * Click on the break point to see the gene structure around the break point region using the UCSC Genome Browser. |
ORF | Henst | Tenst | Hgene | Hchr | Hbp | Hstrand | Tgene | Tchr | Tbp | Tstrand |
intron-5UTR | ENST00000295974 | ENST00000256442 | APBB2 | chr4 | 40816464 | + | CCNB1 | chr5 | 68462964 | + |
intron-5UTR | ENST00000513140 | ENST00000256442 | APBB2 | chr4 | 40816464 | + | CCNB1 | chr5 | 68462964 | + |
intron-5UTR | ENST00000508593 | ENST00000256442 | APBB2 | chr4 | 40816464 | + | CCNB1 | chr5 | 68462964 | + |
intron-5UTR | ENST00000506352 | ENST00000256442 | APBB2 | chr4 | 40816464 | + | CCNB1 | chr5 | 68462964 | + |
intron-5UTR | ENST00000511572 | ENST00000256442 | APBB2 | chr4 | 40816464 | + | CCNB1 | chr5 | 68462964 | + |
intron-5UTR | ENST00000543538 | ENST00000256442 | APBB2 | chr4 | 40816464 | + | CCNB1 | chr5 | 68462964 | + |
intron-5UTR | ENST00000502841 | ENST00000256442 | APBB2 | chr4 | 40816464 | + | CCNB1 | chr5 | 68462964 | + |
intron-5UTR | ENST00000504305 | ENST00000256442 | APBB2 | chr4 | 40816464 | + | CCNB1 | chr5 | 68462964 | + |
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FusionProtFeatures for APBB2_CCNB1 |
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Hgene | Tgene |
APBB2 | CCNB1 |
May modulate the internalization of amyloid-betaprecursor protein. | Essential for the control of the cell cycle at the G2/M(mitosis) transition. {ECO:0000269|PubMed:17495531,ECO:0000269|PubMed:17495533}. |
![]() * Minus value of BPloci means that the break pointn is located before the CDS. |
- In-frame and retained protein feature among the 13 regional features. |
Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Protein feature | Protein feature note |
- In-frame and not-retained protein feature among the 13 regional features. |
Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Protein feature | Protein feature note |
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FusionGeneSequence for APBB2_CCNB1 |
![]() (nt: nucleotides, aa: amino acids) |
* Fusion amino acid sequences. |
* Fusion transcript sequences (only coding sequence (CDS) region). |
* Fusion transcript sequences (Full-length transcript). |
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FusionGenePPI for APBB2_CCNB1 |
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Hgene | Hgene's interactors | Tgene | Tgene's interactors |
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Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Still interaction with |
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Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Interaction lost with |
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Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Interaction lost with |
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RelatedDrugs for APBB2_CCNB1 |
![]() (DrugBank Version 5.1.0 2018-04-02) |
Partner | Gene | UniProtAcc | DrugBank ID | Drug name | Drug activity | Drug type | Drug status |
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RelatedDiseases for APBB2_CCNB1 |
![]() (DisGeNet 4.0) |
Partner | Gene | Disease ID | Disease name | # pubmeds | Source |
Hgene | APBB2 | C0043094 | Weight Gain | 1 | CTD_human |
Tgene | CCNB1 | C0032460 | Polycystic Ovary Syndrome | 1 | CTD_human |