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Fusion gene ID: 21139 |
FusionGeneSummary for MAST4_PPWD1 |
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Fusion gene information | Fusion gene name: MAST4_PPWD1 | Fusion gene ID: 21139 | Hgene | Tgene | Gene symbol | MAST4 | PPWD1 | Gene ID | 375449 | 23398 |
Gene name | microtubule associated serine/threonine kinase family member 4 | peptidylprolyl isomerase domain and WD repeat containing 1 | |
Synonyms | - | - | |
Cytomap | 5q12.3 | 5q12.3 | |
Type of gene | protein-coding | protein-coding | |
Description | microtubule-associated serine/threonine-protein kinase 4 | peptidylprolyl isomerase domain and WD repeat-containing protein 1spliceosome-associated cyclophilin | |
Modification date | 20180523 | 20180523 | |
UniProtAcc | O15021 | Q96BP3 | |
Ensembl transtripts involved in fusion gene | ENST00000404260, ENST00000403625, ENST00000406374, ENST00000406039, ENST00000478569, ENST00000490016, ENST00000403666, ENST00000405643, ENST00000261569, ENST00000407621, | ENST00000261308, ENST00000535264, ENST00000538977, | |
Fusion gene scores | * DoF score | 10 X 9 X 7=630 | 3 X 2 X 3=18 |
# samples | 10 | 3 | |
** MAII score | log2(10/630*10)=-2.65535182861255 possibly effective Gene in Pan-Cancer Fusion Genes (peGinPCFGs). DoF>8 and MAII<0 | log2(3/18*10)=0.736965594166206 effective Gene in Pan-Cancer Fusion Genes (eGinPCFGs). DoF>8 and MAII>0 | |
Context | PubMed: MAST4 [Title/Abstract] AND PPWD1 [Title/Abstract] AND fusion [Title/Abstract] | ||
Functional or gene categories assigned by FusionGDB annotation |
* DoF score (Degree of Frequency) = # partners X # break points X # cancer types ** MAII score (Major Active Isofusion Index) = log2(# samples/DoF score*10) |
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Partner | Gene | GO ID | GO term | PubMed ID |
Tgene | PPWD1 | GO:0000413 | protein peptidyl-prolyl isomerization | 20676357 |
![]() (ChiTars (NAR, 2018), tumorfusions (NAR, 2018), Gao et al. (Cell, 2018)) * All genome coordinats were lifted-over on hg19. * Click on the break point to see the gene structure around the break point region using the UCSC Genome Browser. |
Data type | Source | Cancer type | Sample | Hgene | Hchr | Hbp | Hstrand | Tgene | Tchr | Tbp | Tstrand |
TCGA | LD | OV | TCGA-59-2363-01A | MAST4 | chr5 | 66386059 | + | PPWD1 | chr5 | 64863340 | + |
* LD: Li Ding group's fusion gene list RV: Roel Verhaak group's fusion gene list ChiTaRs fusion database |
![]() * Click on the break point to see the gene structure around the break point region using the UCSC Genome Browser. |
ORF | Henst | Tenst | Hgene | Hchr | Hbp | Hstrand | Tgene | Tchr | Tbp | Tstrand |
Frame-shift | ENST00000404260 | ENST00000261308 | MAST4 | chr5 | 66386059 | + | PPWD1 | chr5 | 64863340 | + |
Frame-shift | ENST00000404260 | ENST00000535264 | MAST4 | chr5 | 66386059 | + | PPWD1 | chr5 | 64863340 | + |
5CDS-intron | ENST00000404260 | ENST00000538977 | MAST4 | chr5 | 66386059 | + | PPWD1 | chr5 | 64863340 | + |
Frame-shift | ENST00000403625 | ENST00000261308 | MAST4 | chr5 | 66386059 | + | PPWD1 | chr5 | 64863340 | + |
Frame-shift | ENST00000403625 | ENST00000535264 | MAST4 | chr5 | 66386059 | + | PPWD1 | chr5 | 64863340 | + |
5CDS-intron | ENST00000403625 | ENST00000538977 | MAST4 | chr5 | 66386059 | + | PPWD1 | chr5 | 64863340 | + |
intron-3CDS | ENST00000406374 | ENST00000261308 | MAST4 | chr5 | 66386059 | + | PPWD1 | chr5 | 64863340 | + |
intron-3CDS | ENST00000406374 | ENST00000535264 | MAST4 | chr5 | 66386059 | + | PPWD1 | chr5 | 64863340 | + |
intron-intron | ENST00000406374 | ENST00000538977 | MAST4 | chr5 | 66386059 | + | PPWD1 | chr5 | 64863340 | + |
intron-3CDS | ENST00000406039 | ENST00000261308 | MAST4 | chr5 | 66386059 | + | PPWD1 | chr5 | 64863340 | + |
intron-3CDS | ENST00000406039 | ENST00000535264 | MAST4 | chr5 | 66386059 | + | PPWD1 | chr5 | 64863340 | + |
intron-intron | ENST00000406039 | ENST00000538977 | MAST4 | chr5 | 66386059 | + | PPWD1 | chr5 | 64863340 | + |
intron-3CDS | ENST00000478569 | ENST00000261308 | MAST4 | chr5 | 66386059 | + | PPWD1 | chr5 | 64863340 | + |
intron-3CDS | ENST00000478569 | ENST00000535264 | MAST4 | chr5 | 66386059 | + | PPWD1 | chr5 | 64863340 | + |
intron-intron | ENST00000478569 | ENST00000538977 | MAST4 | chr5 | 66386059 | + | PPWD1 | chr5 | 64863340 | + |
Frame-shift | ENST00000490016 | ENST00000261308 | MAST4 | chr5 | 66386059 | + | PPWD1 | chr5 | 64863340 | + |
Frame-shift | ENST00000490016 | ENST00000535264 | MAST4 | chr5 | 66386059 | + | PPWD1 | chr5 | 64863340 | + |
5CDS-intron | ENST00000490016 | ENST00000538977 | MAST4 | chr5 | 66386059 | + | PPWD1 | chr5 | 64863340 | + |
Frame-shift | ENST00000403666 | ENST00000261308 | MAST4 | chr5 | 66386059 | + | PPWD1 | chr5 | 64863340 | + |
Frame-shift | ENST00000403666 | ENST00000535264 | MAST4 | chr5 | 66386059 | + | PPWD1 | chr5 | 64863340 | + |
5CDS-intron | ENST00000403666 | ENST00000538977 | MAST4 | chr5 | 66386059 | + | PPWD1 | chr5 | 64863340 | + |
Frame-shift | ENST00000405643 | ENST00000261308 | MAST4 | chr5 | 66386059 | + | PPWD1 | chr5 | 64863340 | + |
Frame-shift | ENST00000405643 | ENST00000535264 | MAST4 | chr5 | 66386059 | + | PPWD1 | chr5 | 64863340 | + |
5CDS-intron | ENST00000405643 | ENST00000538977 | MAST4 | chr5 | 66386059 | + | PPWD1 | chr5 | 64863340 | + |
Frame-shift | ENST00000261569 | ENST00000261308 | MAST4 | chr5 | 66386059 | + | PPWD1 | chr5 | 64863340 | + |
Frame-shift | ENST00000261569 | ENST00000535264 | MAST4 | chr5 | 66386059 | + | PPWD1 | chr5 | 64863340 | + |
5CDS-intron | ENST00000261569 | ENST00000538977 | MAST4 | chr5 | 66386059 | + | PPWD1 | chr5 | 64863340 | + |
intron-3CDS | ENST00000407621 | ENST00000261308 | MAST4 | chr5 | 66386059 | + | PPWD1 | chr5 | 64863340 | + |
intron-3CDS | ENST00000407621 | ENST00000535264 | MAST4 | chr5 | 66386059 | + | PPWD1 | chr5 | 64863340 | + |
intron-intron | ENST00000407621 | ENST00000538977 | MAST4 | chr5 | 66386059 | + | PPWD1 | chr5 | 64863340 | + |
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FusionProtFeatures for MAST4_PPWD1 |
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Hgene | Tgene |
MAST4 | PPWD1 |
PPIase that catalyzes the cis-trans isomerization ofproline imidic peptide bonds in oligopeptides and may thereforeassist protein folding (PubMed:20676357). May be involved in pre-mRNA splicing (PubMed:11991638). {ECO:0000269|PubMed:11991638,ECO:0000269|PubMed:20676357}. |
![]() * Minus value of BPloci means that the break pointn is located before the CDS. |
- In-frame and retained protein feature among the 13 regional features. |
Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Protein feature | Protein feature note |
- In-frame and not-retained protein feature among the 13 regional features. |
Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Protein feature | Protein feature note |
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FusionGeneSequence for MAST4_PPWD1 |
![]() (nt: nucleotides, aa: amino acids) |
* Fusion amino acid sequences. |
* Fusion transcript sequences (only coding sequence (CDS) region). |
* Fusion transcript sequences (Full-length transcript). |
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FusionGenePPI for MAST4_PPWD1 |
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Hgene | Hgene's interactors | Tgene | Tgene's interactors |
MAST4 | SMAD1 | PPWD1 | EED, ADRBK1, ACOX1, DDX6, PTPRF, PTBP3, NTRK1, SEC13, ZNF232 |
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Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Still interaction with |
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Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Interaction lost with |
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Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Interaction lost with |
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RelatedDrugs for MAST4_PPWD1 |
![]() (DrugBank Version 5.1.0 2018-04-02) |
Partner | Gene | UniProtAcc | DrugBank ID | Drug name | Drug activity | Drug type | Drug status |
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RelatedDiseases for MAST4_PPWD1 |
![]() (DisGeNet 4.0) |
Partner | Gene | Disease ID | Disease name | # pubmeds | Source |