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Fusion gene ID: 20597 |
FusionGeneSummary for MAK_INTS12 |
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Fusion gene information | Fusion gene name: MAK_INTS12 | Fusion gene ID: 20597 | Hgene | Tgene | Gene symbol | MAK | INTS12 | Gene ID | 4117 | 57117 |
Gene name | male germ cell associated kinase | integrator complex subunit 12 | |
Synonyms | RP62 | INT12|PHF22|SBBI22 | |
Cytomap | 6p24.2 | 4q24 | |
Type of gene | protein-coding | protein-coding | |
Description | serine/threonine-protein kinase MAKmale germ cell-associated kinase retinal-enriched isoformserine/threonine protein kinase MAKtesticular secretory protein Li 28 | integrator complex subunit 12PHD finger protein 22hypothetical nuclear factor SBBI22 | |
Modification date | 20180523 | 20180519 | |
UniProtAcc | P20794 | Q96CB8 | |
Ensembl transtripts involved in fusion gene | ENST00000354489, ENST00000313243, ENST00000474039, ENST00000538030, ENST00000536370, | ENST00000394735, ENST00000340139, ENST00000451321, | |
Fusion gene scores | * DoF score | 2 X 2 X 2=8 | 3 X 2 X 2=12 |
# samples | 2 | 2 | |
** MAII score | log2(2/8*10)=1.32192809488736 | log2(2/12*10)=0.736965594166206 effective Gene in Pan-Cancer Fusion Genes (eGinPCFGs). DoF>8 and MAII>0 | |
Context | PubMed: MAK [Title/Abstract] AND INTS12 [Title/Abstract] AND fusion [Title/Abstract] | ||
Functional or gene categories assigned by FusionGDB annotation |
* DoF score (Degree of Frequency) = # partners X # break points X # cancer types ** MAII score (Major Active Isofusion Index) = log2(# samples/DoF score*10) |
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Partner | Gene | GO ID | GO term | PubMed ID |
Hgene | MAK | GO:0006468 | protein phosphorylation | 21986944 |
Tgene | INTS12 | GO:0016180 | snRNA processing | 16239144 |
![]() (ChiTars (NAR, 2018), tumorfusions (NAR, 2018), Gao et al. (Cell, 2018)) * All genome coordinats were lifted-over on hg19. * Click on the break point to see the gene structure around the break point region using the UCSC Genome Browser. |
Data type | Source | Cancer type | Sample | Hgene | Hchr | Hbp | Hstrand | Tgene | Tchr | Tbp | Tstrand |
TCGA | RV | PRAD | TCGA-HC-8266-01A | MAK | chr6 | 10791908 | - | INTS12 | chr4 | 106604474 | - |
* LD: Li Ding group's fusion gene list RV: Roel Verhaak group's fusion gene list ChiTaRs fusion database |
![]() * Click on the break point to see the gene structure around the break point region using the UCSC Genome Browser. |
ORF | Henst | Tenst | Hgene | Hchr | Hbp | Hstrand | Tgene | Tchr | Tbp | Tstrand |
Frame-shift | ENST00000354489 | ENST00000394735 | MAK | chr6 | 10791908 | - | INTS12 | chr4 | 106604474 | - |
Frame-shift | ENST00000354489 | ENST00000340139 | MAK | chr6 | 10791908 | - | INTS12 | chr4 | 106604474 | - |
Frame-shift | ENST00000354489 | ENST00000451321 | MAK | chr6 | 10791908 | - | INTS12 | chr4 | 106604474 | - |
Frame-shift | ENST00000313243 | ENST00000394735 | MAK | chr6 | 10791908 | - | INTS12 | chr4 | 106604474 | - |
Frame-shift | ENST00000313243 | ENST00000340139 | MAK | chr6 | 10791908 | - | INTS12 | chr4 | 106604474 | - |
Frame-shift | ENST00000313243 | ENST00000451321 | MAK | chr6 | 10791908 | - | INTS12 | chr4 | 106604474 | - |
Frame-shift | ENST00000474039 | ENST00000394735 | MAK | chr6 | 10791908 | - | INTS12 | chr4 | 106604474 | - |
Frame-shift | ENST00000474039 | ENST00000340139 | MAK | chr6 | 10791908 | - | INTS12 | chr4 | 106604474 | - |
In-frame | ENST00000474039 | ENST00000451321 | MAK | chr6 | 10791908 | - | INTS12 | chr4 | 106604474 | - |
Frame-shift | ENST00000538030 | ENST00000394735 | MAK | chr6 | 10791908 | - | INTS12 | chr4 | 106604474 | - |
Frame-shift | ENST00000538030 | ENST00000340139 | MAK | chr6 | 10791908 | - | INTS12 | chr4 | 106604474 | - |
Frame-shift | ENST00000538030 | ENST00000451321 | MAK | chr6 | 10791908 | - | INTS12 | chr4 | 106604474 | - |
intron-3CDS | ENST00000536370 | ENST00000394735 | MAK | chr6 | 10791908 | - | INTS12 | chr4 | 106604474 | - |
intron-3CDS | ENST00000536370 | ENST00000340139 | MAK | chr6 | 10791908 | - | INTS12 | chr4 | 106604474 | - |
intron-3CDS | ENST00000536370 | ENST00000451321 | MAK | chr6 | 10791908 | - | INTS12 | chr4 | 106604474 | - |
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FusionProtFeatures for MAK_INTS12 |
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Hgene | Tgene |
MAK | INTS12 |
Essential for the regulation of ciliary length andrequired for the long-term survival of photoreceptors (Bysimilarity). Phosphorylates FZR1 in a cell cycle-dependent manner.Plays a role in the transcriptional coactivation of AR. Could playan important function in spermatogenesis. May play a role inchromosomal stability in prostate cancer cells. {ECO:0000250,ECO:0000269|PubMed:12084720, ECO:0000269|PubMed:16951154,ECO:0000269|PubMed:21986944}. | Component of the Integrator complex, a complex involvedin the small nuclear RNAs (snRNA) U1 and U2 transcription and intheir 3'-box-dependent processing. The Integrator complex isassociated with the C-terminal domain (CTD) of RNA polymerase IIlargest subunit (POLR2A) and is recruited to the U1 and U2 snRNAsgenes (PubMed:16239144). Mediates recruitment of cytoplasmicdynein to the nuclear envelope, probably as component of the INTcomplex (PubMed:23904267). {ECO:0000269|PubMed:16239144,ECO:0000269|PubMed:23904267}. |
![]() * Minus value of BPloci means that the break pointn is located before the CDS. |
- In-frame and retained protein feature among the 13 regional features. |
Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Protein feature | Protein feature note |
- In-frame and not-retained protein feature among the 13 regional features. |
Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Protein feature | Protein feature note |
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FusionGeneSequence for MAK_INTS12 |
![]() (nt: nucleotides, aa: amino acids) |
* Fusion amino acid sequences. |
>In-frame_MAK_ENST00000474039_chr6_10791908_-_INTS12_ENST00000451321_chr4_106604474_-_633aa MNRYTTMRQLGDGTYGSVLMGKSNESGELVAIKRMKRKFYSWDECMNLREVKSLKKLNHANVIKLKEVIRENDHLYFIFEYMKENLYQLM KDRNKLFPESVIRNIMYQILQGLAFIHKHGFFHRDMKPENLLCMGPELVKIADFGLARELRSQPPYTDYVSTRWYRAPEVLLRSSVYSSP IDVWAVGSIMAELYMLRPLFPGTSEVDEIFKICQVLGTPKKSDWPEGYQLASSMNFRFPQCVPINLKTLIPNASNEAIQLMTEMLNWDPK KRPTASQALKHPYFQVGQVLGPSSNHLESKQSLNKQLQPLESKPSLVEVEPKPLPDIIDQVVGQPQPKTSQQPLQPIQPPQNLSVQQPPK QQSQEKPPQTLFPSIVKNMPTKPNGTLSHKSGRRRWGQTIFKSGDSWEELEDYDFGASHSKKPSMGVFKEKRKKDSPFRHPQLFQEILLV PAFPRQXLVAXLDGQLLQPKLPLLVLQQQNXVQQHKTILGNLLLRQLTRNLWVXLVWQHHPKVEXVPKXVPITALRPLYLXNHLHLXPWV KLALVAQLVVTMSAKXVFLVQVVXFQEAAANXVGMEIVEHQDLVEVLPAKLLQNPAALPQHPLKAQLHKNHSSMLXSDYRWSRRKLPKRN |
* Fusion transcript sequences (only coding sequence (CDS) region). |
>In-frame_MAK_ENST00000474039_chr6_10791908_-_INTS12_ENST00000451321_chr4_106604474_-_1901nt ATGAACCGATACACAACCATGAGACAGTTGGGGGACGGCACGTATGGGAGTGTGCTTATGGGCAAGAGTAATGAATCCGGGGAGCTGGTG GCCATCAAAAGGATGAAGAGAAAGTTCTATTCTTGGGATGAATGCATGAACTTGAGAGAAGTTAAGTCTCTGAAGAAACTTAATCATGCC AATGTTATTAAATTGAAAGAAGTTATCAGAGAAAATGACCATCTTTATTTTATATTTGAATATATGAAAGAAAACCTCTATCAATTAATG AAAGACAGAAACAAGTTGTTCCCTGAATCAGTCATCAGAAATATTATGTATCAAATATTGCAAGGGCTGGCTTTTATCCATAAACATGGC TTTTTTCATAGGGACATGAAACCAGAAAACTTGCTTTGTATGGGTCCAGAGCTTGTGAAAATTGCTGATTTTGGACTTGCAAGAGAATTA AGGTCACAGCCACCATACACTGATTATGTATCTACCAGATGGTATCGTGCCCCTGAAGTTTTACTGAGATCTTCAGTTTATAGTTCTCCC ATTGATGTGTGGGCTGTTGGAAGTATCATGGCTGAACTCTATATGTTAAGGCCACTTTTCCCAGGGACAAGTGAGGTCGATGAAATCTTT AAAATTTGCCAAGTTTTAGGGACTCCCAAAAAAAGTGACTGGCCAGAAGGATACCAGCTGGCATCCTCTATGAACTTCCGTTTTCCCCAG TGTGTTCCTATAAACTTAAAAACTCTTATTCCCAATGCCAGTAATGAAGCTATTCAGCTCATGACCGAAATGTTGAATTGGGATCCAAAG AAACGACCGACAGCAAGCCAGGCATTGAAACACCCATATTTTCAAGTTGGTCAGGTATTAGGCCCTTCGTCAAATCATCTGGAATCAAAA CAGTCTTTAAATAAGCAGCTGCAACCATTAGAATCAAAGCCATCTTTAGTTGAGGTAGAGCCTAAGCCTCTGCCGGATATAATCGATCAG GTTGTTGGACAACCCCAGCCAAAAACTAGCCAGCAGCCACTGCAGCCCATTCAGCCGCCACAGAACCTGAGCGTCCAGCAACCTCCAAAG CAACAGAGTCAGGAGAAACCGCCACAAACGCTATTCCCGAGCATCGTCAAAAACATGCCAACTAAGCCAAATGGCACACTGAGTCATAAA AGTGGTAGGAGGCGTTGGGGTCAGACTATCTTCAAGTCTGGAGATAGCTGGGAAGAGTTGGAGGACTATGATTTCGGAGCCTCCCATTCC AAGAAGCCAAGCATGGGTGTTTTTAAAGAAAAAAGGAAAAAAGATTCTCCATTTCGACATCCACAGTTATTTCAGGAAATTCTTCTAGTG CCAGCGTTTCCTCGTCAGTAACTAGTGGCTTAACTGGATGGGCAGCTTTTGCAGCCAAAACTTCCTCTGCTGGTCCTTCAACAGCAAAAT TGAGTTCAACAACACAAAACAATACTGGGAAACCTGCTACTTCGTCAGCTAACCAGAAACCTGTGGGTTTGACTGGTCTGGCAACATCAT CCAAAGGTGGAATAGGTTCCAAAATAGGTTCCAATAACAGCACTACGCCCACTGTACCTTTAAAACCACCTCCACCTCTAACCTTGGGTA AAACTGGCCTTAGTCGCTCAGTTAGTTGTGACAATGTCAGCAAAGTAGGTCTTCCTAGTCCAAGTAGTTTAGTTCCAGGAAGCAGCAGCC AACTAAGTGGGAATGGAAATAGTGGAACATCAGGACCTAGTGGAAGTACTACCAGCAAAACTACTTCAGAATCCAGCAGCTCTCCCTCAG CATCCCTTAAAGGCCCAACTTCACAAGAATCACAGCTCAATGCTATGAAGCGATTACAGATGGTCAAGAAGAAAGCTGCCCAAAAGAAAC |
* Fusion transcript sequences (Full-length transcript). |
>In-frame_MAK_ENST00000474039_chr6_10791908_-_INTS12_ENST00000451321_chr4_106604474_-_2265nt CGCCGGAGCTTCACAAGGGAGCGAACGAGGGTGTTTATAAGAATGGAAGTGTTGTTTCCTTGCCCGATTCCTTCATGCTATATCTCATGA ACCTCTGTAATCTTGGGGGAGAGACTATATTTAATGATGACAAACCTGTCACCAGTGTAGCAACAACAGTGTGAGGACAAAAGCAAATAA AAATTAAGAAGCGTTCAAATTTATATTCAACAAGGAAGTCATTTCAATCAACAACTTCTGCTGCATTATTTTTCCAAGATGAACCGATAC ACAACCATGAGACAGTTGGGGGACGGCACGTATGGGAGTGTGCTTATGGGCAAGAGTAATGAATCCGGGGAGCTGGTGGCCATCAAAAGG ATGAAGAGAAAGTTCTATTCTTGGGATGAATGCATGAACTTGAGAGAAGTTAAGTCTCTGAAGAAACTTAATCATGCCAATGTTATTAAA TTGAAAGAAGTTATCAGAGAAAATGACCATCTTTATTTTATATTTGAATATATGAAAGAAAACCTCTATCAATTAATGAAAGACAGAAAC AAGTTGTTCCCTGAATCAGTCATCAGAAATATTATGTATCAAATATTGCAAGGGCTGGCTTTTATCCATAAACATGGCTTTTTTCATAGG GACATGAAACCAGAAAACTTGCTTTGTATGGGTCCAGAGCTTGTGAAAATTGCTGATTTTGGACTTGCAAGAGAATTAAGGTCACAGCCA CCATACACTGATTATGTATCTACCAGATGGTATCGTGCCCCTGAAGTTTTACTGAGATCTTCAGTTTATAGTTCTCCCATTGATGTGTGG GCTGTTGGAAGTATCATGGCTGAACTCTATATGTTAAGGCCACTTTTCCCAGGGACAAGTGAGGTCGATGAAATCTTTAAAATTTGCCAA GTTTTAGGGACTCCCAAAAAAAGTGACTGGCCAGAAGGATACCAGCTGGCATCCTCTATGAACTTCCGTTTTCCCCAGTGTGTTCCTATA AACTTAAAAACTCTTATTCCCAATGCCAGTAATGAAGCTATTCAGCTCATGACCGAAATGTTGAATTGGGATCCAAAGAAACGACCGACA GCAAGCCAGGCATTGAAACACCCATATTTTCAAGTTGGTCAGGTATTAGGCCCTTCGTCAAATCATCTGGAATCAAAACAGTCTTTAAAT AAGCAGCTGCAACCATTAGAATCAAAGCCATCTTTAGTTGAGGTAGAGCCTAAGCCTCTGCCGGATATAATCGATCAGGTTGTTGGACAA CCCCAGCCAAAAACTAGCCAGCAGCCACTGCAGCCCATTCAGCCGCCACAGAACCTGAGCGTCCAGCAACCTCCAAAGCAACAGAGTCAG GAGAAACCGCCACAAACGCTATTCCCGAGCATCGTCAAAAACATGCCAACTAAGCCAAATGGCACACTGAGTCATAAAAGTGGTAGGAGG CGTTGGGGTCAGACTATCTTCAAGTCTGGAGATAGCTGGGAAGAGTTGGAGGACTATGATTTCGGAGCCTCCCATTCCAAGAAGCCAAGC ATGGGTGTTTTTAAAGAAAAAAGGAAAAAAGATTCTCCATTTCGACATCCACAGTTATTTCAGGAAATTCTTCTAGTGCCAGCGTTTCCT CGTCAGTAACTAGTGGCTTAACTGGATGGGCAGCTTTTGCAGCCAAAACTTCCTCTGCTGGTCCTTCAACAGCAAAATTGAGTTCAACAA CACAAAACAATACTGGGAAACCTGCTACTTCGTCAGCTAACCAGAAACCTGTGGGTTTGACTGGTCTGGCAACATCATCCAAAGGTGGAA TAGGTTCCAAAATAGGTTCCAATAACAGCACTACGCCCACTGTACCTTTAAAACCACCTCCACCTCTAACCTTGGGTAAAACTGGCCTTA GTCGCTCAGTTAGTTGTGACAATGTCAGCAAAGTAGGTCTTCCTAGTCCAAGTAGTTTAGTTCCAGGAAGCAGCAGCCAACTAAGTGGGA ATGGAAATAGTGGAACATCAGGACCTAGTGGAAGTACTACCAGCAAAACTACTTCAGAATCCAGCAGCTCTCCCTCAGCATCCCTTAAAG GCCCAACTTCACAAGAATCACAGCTCAATGCTATGAAGCGATTACAGATGGTCAAGAAGAAAGCTGCCCAAAAGAAACTCAAGAAGTAAT GTGGCCAAGTAGGTTTTTGTATCATATTAGCCTAAAGATGAAAGGCTTATTATTATGATATAATCTGTAATACACTGTAATTTAATAAAA |
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FusionGenePPI for MAK_INTS12 |
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Hgene | Hgene's interactors | Tgene | Tgene's interactors |
MAK | MAK, CDK20, FZR1, APP, SLAMF7, SERINC1, ANAPC11, NDUFB7, PPP2CB, SND1, PVRL3, FLG, ICK, KIAA0556, PRDX2 | INTS12 | INTS1, INTS3, INTS5, INTS6, INTS10, APP, POLR2C, BSG, TAS2R7, KIR2DS2, SLAMF1, ST8SIA1, TGOLN2, ALDH3A2, PPP2CA, PPP2CB, PPP2R1A, VWA9, NELFA, FOXJ2, USP37, APLNR, IL13RA2, EDNRB, ILVBL, ARL13A, MAS1, F2RL1, FZD10, ST6GAL1, DKKL1, KDELR3, GTF2IRD1 |
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Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Still interaction with |
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Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Interaction lost with |
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Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Interaction lost with |
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RelatedDrugs for MAK_INTS12 |
![]() (DrugBank Version 5.1.0 2018-04-02) |
Partner | Gene | UniProtAcc | DrugBank ID | Drug name | Drug activity | Drug type | Drug status |
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RelatedDiseases for MAK_INTS12 |
![]() (DisGeNet 4.0) |
Partner | Gene | Disease ID | Disease name | # pubmeds | Source |
Hgene | MAK | C3280042 | RETINITIS PIGMENTOSA 62 | 1 | UNIPROT |