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Fusion gene ID: 20579 |
FusionGeneSummary for MAGI1_SUCLG2 |
Fusion gene summary |
Fusion gene information | Fusion gene name: MAGI1_SUCLG2 | Fusion gene ID: 20579 | Hgene | Tgene | Gene symbol | MAGI1 | SUCLG2 | Gene ID | 154043 | 8801 |
Gene name | CNKSR family member 3 | succinate-CoA ligase GDP-forming beta subunit | |
Synonyms | CNK3|CNK3/IPCEF1|MAGI1 | G-SCS|GBETA|GTPSCS | |
Cytomap | 6q25.2 | 3p14.1 | |
Type of gene | protein-coding | protein-coding | |
Description | connector enhancer of kinase suppressor of ras 3CNK homolog protein 3connector enhancer of KSR 3maguin-like proteinmembrane associated guanylate kinase, WW and PDZ domain containing 1membrane-associated guanylate kinase-interacting protein-like 1 | succinate--CoA ligase [GDP-forming] subunit beta, mitochondrialGTP-specific succinyl-CoA synthetase beta subunitGTP-specific succinyl-CoA synthetase subunit betaSCS-betaGsuccinyl-CoA ligase [GDP-forming] subunit beta, mitochondrialsuccinyl-CoA ligase | |
Modification date | 20180522 | 20180522 | |
UniProtAcc | Q96QZ7 | Q96I99 | |
Ensembl transtripts involved in fusion gene | ENST00000330909, ENST00000402939, ENST00000483466, ENST00000497477, ENST00000470990, | ENST00000493112, ENST00000307227, ENST00000492795, | |
Fusion gene scores | * DoF score | 10 X 6 X 6=360 | 4 X 2 X 3=24 |
# samples | 10 | 4 | |
** MAII score | log2(10/360*10)=-1.84799690655495 possibly effective Gene in Pan-Cancer Fusion Genes (peGinPCFGs). DoF>8 and MAII<0 | log2(4/24*10)=0.736965594166206 effective Gene in Pan-Cancer Fusion Genes (eGinPCFGs). DoF>8 and MAII>0 | |
Context | PubMed: MAGI1 [Title/Abstract] AND SUCLG2 [Title/Abstract] AND fusion [Title/Abstract] | ||
Functional or gene categories assigned by FusionGDB annotation |
* DoF score (Degree of Frequency) = # partners X # break points X # cancer types ** MAII score (Major Active Isofusion Index) = log2(# samples/DoF score*10) |
Gene ontology of each fusion partner gene with evidence of Inferred from Direct Assay (IDA) from Entrez |
Partner | Gene | GO ID | GO term | PubMed ID |
Fusion gene information from three resources (ChiTars (NAR, 2018), tumorfusions (NAR, 2018), Gao et al. (Cell, 2018)) * All genome coordinats were lifted-over on hg19. * Click on the break point to see the gene structure around the break point region using the UCSC Genome Browser. |
Data type | Source | Cancer type | Sample | Hgene | Hchr | Hbp | Hstrand | Tgene | Tchr | Tbp | Tstrand |
TCGA | RV | PRAD | TCGA-ZG-A9KY-01A | MAGI1 | chr3 | 66023671 | - | SUCLG2 | chr3 | 67451275 | - |
* LD: Li Ding group's fusion gene list RV: Roel Verhaak group's fusion gene list ChiTaRs fusion database |
Open reading frame (ORF) analsis of fusion genes based on Ensembl gene isoform structure. * Click on the break point to see the gene structure around the break point region using the UCSC Genome Browser. |
ORF | Henst | Tenst | Hgene | Hchr | Hbp | Hstrand | Tgene | Tchr | Tbp | Tstrand |
In-frame | ENST00000330909 | ENST00000493112 | MAGI1 | chr3 | 66023671 | - | SUCLG2 | chr3 | 67451275 | - |
In-frame | ENST00000330909 | ENST00000307227 | MAGI1 | chr3 | 66023671 | - | SUCLG2 | chr3 | 67451275 | - |
5CDS-intron | ENST00000330909 | ENST00000492795 | MAGI1 | chr3 | 66023671 | - | SUCLG2 | chr3 | 67451275 | - |
In-frame | ENST00000402939 | ENST00000493112 | MAGI1 | chr3 | 66023671 | - | SUCLG2 | chr3 | 67451275 | - |
In-frame | ENST00000402939 | ENST00000307227 | MAGI1 | chr3 | 66023671 | - | SUCLG2 | chr3 | 67451275 | - |
5CDS-intron | ENST00000402939 | ENST00000492795 | MAGI1 | chr3 | 66023671 | - | SUCLG2 | chr3 | 67451275 | - |
In-frame | ENST00000483466 | ENST00000493112 | MAGI1 | chr3 | 66023671 | - | SUCLG2 | chr3 | 67451275 | - |
In-frame | ENST00000483466 | ENST00000307227 | MAGI1 | chr3 | 66023671 | - | SUCLG2 | chr3 | 67451275 | - |
5CDS-intron | ENST00000483466 | ENST00000492795 | MAGI1 | chr3 | 66023671 | - | SUCLG2 | chr3 | 67451275 | - |
In-frame | ENST00000497477 | ENST00000493112 | MAGI1 | chr3 | 66023671 | - | SUCLG2 | chr3 | 67451275 | - |
In-frame | ENST00000497477 | ENST00000307227 | MAGI1 | chr3 | 66023671 | - | SUCLG2 | chr3 | 67451275 | - |
5CDS-intron | ENST00000497477 | ENST00000492795 | MAGI1 | chr3 | 66023671 | - | SUCLG2 | chr3 | 67451275 | - |
intron-3CDS | ENST00000470990 | ENST00000493112 | MAGI1 | chr3 | 66023671 | - | SUCLG2 | chr3 | 67451275 | - |
intron-3CDS | ENST00000470990 | ENST00000307227 | MAGI1 | chr3 | 66023671 | - | SUCLG2 | chr3 | 67451275 | - |
intron-intron | ENST00000470990 | ENST00000492795 | MAGI1 | chr3 | 66023671 | - | SUCLG2 | chr3 | 67451275 | - |
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FusionProtFeatures for MAGI1_SUCLG2 |
Main function of each fusion partner protein. (from UniProt) |
Hgene | Tgene |
MAGI1 | SUCLG2 |
May play a role as scaffolding protein at cell-celljunctions. May regulate acid-induced ASIC3 currents by modulatingits expression at the cell surface (By similarity). {ECO:0000250}. | GTP-specific succinyl-CoA synthetase functions in thecitric acid cycle (TCA), coupling the hydrolysis of succinyl-CoAto the synthesis of GTP and thus represents the only step ofsubstrate-level phosphorylation in the TCA. The beta subunitprovides nucleotide specificity of the enzyme and binds thesubstrate succinate, while the binding sites for coenzyme A andphosphate are found in the alpha subunit. {ECO:0000255|HAMAP-Rule:MF_03221}. |
Retention analysis result of each fusion partner protein across 39 protein features of UniProt such as six molecule processing features, 13 region features, four site features, six amino acid modification features, two natural variation features, five experimental info features, and 3 secondary structure features. Here, because of limited space for viewing, we only show the protein feature retention information belong to the 13 regional features. All retention annotation result can be downloaded at . * Minus value of BPloci means that the break pointn is located before the CDS. |
- In-frame and retained protein feature among the 13 regional features. |
Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Protein feature | Protein feature note |
Hgene | MAGI1 | chr3:66023671 | chr3:67451275 | ENST00000330909 | - | 1 | 25 | 17_105 | 104 | 1288 | Domain | PDZ 1 |
Hgene | MAGI1 | chr3:66023671 | chr3:67451275 | ENST00000402939 | - | 1 | 23 | 17_105 | 104 | 1463 | Domain | PDZ 1 |
Hgene | MAGI1 | chr3:66023671 | chr3:67451275 | ENST00000483466 | - | 1 | 23 | 17_105 | 104 | 1257 | Domain | PDZ 1 |
Hgene | MAGI1 | chr3:66023671 | chr3:67451275 | ENST00000497477 | - | 1 | 21 | 17_105 | 104 | 1161 | Domain | PDZ 1 |
Tgene | >SUCLG2 | chr3:66023671 | chr3:67451275 | ENST00000307227 | - | 8 | 11 | 365_367 | 354 | 433 | Region | Substrate binding%3B shared with subunit alpha |
Tgene | >SUCLG2 | chr3:66023671 | chr3:67451275 | ENST00000493112 | - | 8 | 11 | 365_367 | 354 | 441 | Region | Substrate binding%3B shared with subunit alpha |
- In-frame and not-retained protein feature among the 13 regional features. |
Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Protein feature | Protein feature note |
Hgene | >MAGI1 | chr3:66023671 | chr3:67451275 | ENST00000330909 | - | 1 | 25 | 1341_1344 | 104 | 1288 | Compositional bias | Note=Poly-Ala |
Hgene | >MAGI1 | chr3:66023671 | chr3:67451275 | ENST00000330909 | - | 1 | 25 | 1398_1401 | 104 | 1288 | Compositional bias | Note=Poly-Arg |
Hgene | >MAGI1 | chr3:66023671 | chr3:67451275 | ENST00000330909 | - | 1 | 25 | 402_421 | 104 | 1288 | Compositional bias | Note=Poly-Gln |
Hgene | >MAGI1 | chr3:66023671 | chr3:67451275 | ENST00000330909 | - | 1 | 25 | 662_665 | 104 | 1288 | Compositional bias | Note=Poly-Gly |
Hgene | >MAGI1 | chr3:66023671 | chr3:67451275 | ENST00000330909 | - | 1 | 25 | 978_988 | 104 | 1288 | Compositional bias | Note=Poly-Gly |
Hgene | >MAGI1 | chr3:66023671 | chr3:67451275 | ENST00000402939 | - | 1 | 23 | 1341_1344 | 104 | 1463 | Compositional bias | Note=Poly-Ala |
Hgene | >MAGI1 | chr3:66023671 | chr3:67451275 | ENST00000402939 | - | 1 | 23 | 1398_1401 | 104 | 1463 | Compositional bias | Note=Poly-Arg |
Hgene | >MAGI1 | chr3:66023671 | chr3:67451275 | ENST00000402939 | - | 1 | 23 | 402_421 | 104 | 1463 | Compositional bias | Note=Poly-Gln |
Hgene | >MAGI1 | chr3:66023671 | chr3:67451275 | ENST00000402939 | - | 1 | 23 | 662_665 | 104 | 1463 | Compositional bias | Note=Poly-Gly |
Hgene | >MAGI1 | chr3:66023671 | chr3:67451275 | ENST00000402939 | - | 1 | 23 | 978_988 | 104 | 1463 | Compositional bias | Note=Poly-Gly |
Hgene | >MAGI1 | chr3:66023671 | chr3:67451275 | ENST00000483466 | - | 1 | 23 | 1341_1344 | 104 | 1257 | Compositional bias | Note=Poly-Ala |
Hgene | >MAGI1 | chr3:66023671 | chr3:67451275 | ENST00000483466 | - | 1 | 23 | 1398_1401 | 104 | 1257 | Compositional bias | Note=Poly-Arg |
Hgene | >MAGI1 | chr3:66023671 | chr3:67451275 | ENST00000483466 | - | 1 | 23 | 402_421 | 104 | 1257 | Compositional bias | Note=Poly-Gln |
Hgene | >MAGI1 | chr3:66023671 | chr3:67451275 | ENST00000483466 | - | 1 | 23 | 662_665 | 104 | 1257 | Compositional bias | Note=Poly-Gly |
Hgene | >MAGI1 | chr3:66023671 | chr3:67451275 | ENST00000483466 | - | 1 | 23 | 978_988 | 104 | 1257 | Compositional bias | Note=Poly-Gly |
Hgene | >MAGI1 | chr3:66023671 | chr3:67451275 | ENST00000497477 | - | 1 | 21 | 1341_1344 | 104 | 1161 | Compositional bias | Note=Poly-Ala |
Hgene | >MAGI1 | chr3:66023671 | chr3:67451275 | ENST00000497477 | - | 1 | 21 | 1398_1401 | 104 | 1161 | Compositional bias | Note=Poly-Arg |
Hgene | >MAGI1 | chr3:66023671 | chr3:67451275 | ENST00000497477 | - | 1 | 21 | 402_421 | 104 | 1161 | Compositional bias | Note=Poly-Gln |
Hgene | >MAGI1 | chr3:66023671 | chr3:67451275 | ENST00000497477 | - | 1 | 21 | 662_665 | 104 | 1161 | Compositional bias | Note=Poly-Gly |
Hgene | >MAGI1 | chr3:66023671 | chr3:67451275 | ENST00000497477 | - | 1 | 21 | 978_988 | 104 | 1161 | Compositional bias | Note=Poly-Gly |
Hgene | >MAGI1 | chr3:66023671 | chr3:67451275 | ENST00000330909 | - | 1 | 25 | 1124_1206 | 104 | 1288 | Domain | PDZ 6 |
Hgene | >MAGI1 | chr3:66023671 | chr3:67451275 | ENST00000330909 | - | 1 | 25 | 300_333 | 104 | 1288 | Domain | WW 1 |
Hgene | >MAGI1 | chr3:66023671 | chr3:67451275 | ENST00000330909 | - | 1 | 25 | 359_392 | 104 | 1288 | Domain | WW 2 |
Hgene | >MAGI1 | chr3:66023671 | chr3:67451275 | ENST00000330909 | - | 1 | 25 | 472_554 | 104 | 1288 | Domain | PDZ 2 |
Hgene | >MAGI1 | chr3:66023671 | chr3:67451275 | ENST00000330909 | - | 1 | 25 | 643_721 | 104 | 1288 | Domain | PDZ 3 |
Hgene | >MAGI1 | chr3:66023671 | chr3:67451275 | ENST00000330909 | - | 1 | 25 | 813_895 | 104 | 1288 | Domain | PDZ 4 |
Hgene | >MAGI1 | chr3:66023671 | chr3:67451275 | ENST00000330909 | - | 1 | 25 | 96_287 | 104 | 1288 | Domain | Guanylate kinase-like |
Hgene | >MAGI1 | chr3:66023671 | chr3:67451275 | ENST00000402939 | - | 1 | 23 | 1124_1206 | 104 | 1463 | Domain | PDZ 6 |
Hgene | >MAGI1 | chr3:66023671 | chr3:67451275 | ENST00000402939 | - | 1 | 23 | 300_333 | 104 | 1463 | Domain | WW 1 |
Hgene | >MAGI1 | chr3:66023671 | chr3:67451275 | ENST00000402939 | - | 1 | 23 | 359_392 | 104 | 1463 | Domain | WW 2 |
Hgene | >MAGI1 | chr3:66023671 | chr3:67451275 | ENST00000402939 | - | 1 | 23 | 472_554 | 104 | 1463 | Domain | PDZ 2 |
Hgene | >MAGI1 | chr3:66023671 | chr3:67451275 | ENST00000402939 | - | 1 | 23 | 643_721 | 104 | 1463 | Domain | PDZ 3 |
Hgene | >MAGI1 | chr3:66023671 | chr3:67451275 | ENST00000402939 | - | 1 | 23 | 813_895 | 104 | 1463 | Domain | PDZ 4 |
Hgene | >MAGI1 | chr3:66023671 | chr3:67451275 | ENST00000402939 | - | 1 | 23 | 96_287 | 104 | 1463 | Domain | Guanylate kinase-like |
Hgene | >MAGI1 | chr3:66023671 | chr3:67451275 | ENST00000483466 | - | 1 | 23 | 1124_1206 | 104 | 1257 | Domain | PDZ 6 |
Hgene | >MAGI1 | chr3:66023671 | chr3:67451275 | ENST00000483466 | - | 1 | 23 | 300_333 | 104 | 1257 | Domain | WW 1 |
Hgene | >MAGI1 | chr3:66023671 | chr3:67451275 | ENST00000483466 | - | 1 | 23 | 359_392 | 104 | 1257 | Domain | WW 2 |
Hgene | >MAGI1 | chr3:66023671 | chr3:67451275 | ENST00000483466 | - | 1 | 23 | 472_554 | 104 | 1257 | Domain | PDZ 2 |
Hgene | >MAGI1 | chr3:66023671 | chr3:67451275 | ENST00000483466 | - | 1 | 23 | 643_721 | 104 | 1257 | Domain | PDZ 3 |
Hgene | >MAGI1 | chr3:66023671 | chr3:67451275 | ENST00000483466 | - | 1 | 23 | 813_895 | 104 | 1257 | Domain | PDZ 4 |
Hgene | >MAGI1 | chr3:66023671 | chr3:67451275 | ENST00000483466 | - | 1 | 23 | 96_287 | 104 | 1257 | Domain | Guanylate kinase-like |
Hgene | >MAGI1 | chr3:66023671 | chr3:67451275 | ENST00000497477 | - | 1 | 21 | 1124_1206 | 104 | 1161 | Domain | PDZ 6 |
Hgene | >MAGI1 | chr3:66023671 | chr3:67451275 | ENST00000497477 | - | 1 | 21 | 300_333 | 104 | 1161 | Domain | WW 1 |
Hgene | >MAGI1 | chr3:66023671 | chr3:67451275 | ENST00000497477 | - | 1 | 21 | 359_392 | 104 | 1161 | Domain | WW 2 |
Hgene | >MAGI1 | chr3:66023671 | chr3:67451275 | ENST00000497477 | - | 1 | 21 | 472_554 | 104 | 1161 | Domain | PDZ 2 |
Hgene | >MAGI1 | chr3:66023671 | chr3:67451275 | ENST00000497477 | - | 1 | 21 | 643_721 | 104 | 1161 | Domain | PDZ 3 |
Hgene | >MAGI1 | chr3:66023671 | chr3:67451275 | ENST00000497477 | - | 1 | 21 | 813_895 | 104 | 1161 | Domain | PDZ 4 |
Hgene | >MAGI1 | chr3:66023671 | chr3:67451275 | ENST00000497477 | - | 1 | 21 | 96_287 | 104 | 1161 | Domain | Guanylate kinase-like |
Hgene | >MAGI1 | chr3:66023671 | chr3:67451275 | ENST00000330909 | - | 1 | 25 | 103_110 | 104 | 1288 | Nucleotide binding | ATP |
Hgene | >MAGI1 | chr3:66023671 | chr3:67451275 | ENST00000402939 | - | 1 | 23 | 103_110 | 104 | 1463 | Nucleotide binding | ATP |
Hgene | >MAGI1 | chr3:66023671 | chr3:67451275 | ENST00000483466 | - | 1 | 23 | 103_110 | 104 | 1257 | Nucleotide binding | ATP |
Hgene | >MAGI1 | chr3:66023671 | chr3:67451275 | ENST00000497477 | - | 1 | 21 | 103_110 | 104 | 1161 | Nucleotide binding | ATP |
Tgene | SUCLG2 | chr3:66023671 | chr3:67451275 | ENST00000307227 | - | 8 | 11 | 46_274 | 354 | 433 | Domain | ATP-grasp |
Tgene | SUCLG2 | chr3:66023671 | chr3:67451275 | ENST00000493112 | - | 8 | 11 | 46_274 | 354 | 441 | Domain | ATP-grasp |
Tgene | SUCLG2 | chr3:66023671 | chr3:67451275 | ENST00000307227 | - | 8 | 11 | 90_92 | 354 | 433 | Nucleotide binding | GTP |
Tgene | SUCLG2 | chr3:66023671 | chr3:67451275 | ENST00000493112 | - | 8 | 11 | 90_92 | 354 | 441 | Nucleotide binding | GTP |
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FusionGeneSequence for MAGI1_SUCLG2 |
For in-frame fusion transcripts, we provide the fusion transcript sequences and fusion amino acid sequences. (nt: nucleotides, aa: amino acids) |
* Fusion amino acid sequences. |
>In-frame_MAGI1_ENST00000330909_chr3_66023671_-_SUCLG2_ENST00000493112_chr3_67451275_-_191aa MSKVIQKKNHWTSRVHECTVKRGPQGELGVTVLGGAEHGEFPYVGAVAAVEAAGLPGGGEGPRLGEGELLLEVQGVRVSGLPRYDVLGVI DSCKEAVTFKAVRQGXSHPCQYIWWYRQLCHHCQWDHQSLPGARTQGAPGGPAXRYFYGKKRKLYAHKTRNRKFKXEYNWYPRERRPPKS >In-frame_MAGI1_ENST00000330909_chr3_66023671_-_SUCLG2_ENST00000307227_chr3_67451275_-_183aa MSKVIQKKNHWTSRVHECTVKRGPQGELGVTVLGGAEHGEFPYVGAVAAVEAAGLPGGGEGPRLGEGELLLEVQGVRVSGLPRYDVLGVI DSCKEAVTFKAVRQGXSHPCQYIWWYRQLCHHCQWDHQSLPGARTQGAPGGPAXRNQRPRGPEDTQQQRTPHYFSHXPGGCSQEGCGQCG >In-frame_MAGI1_ENST00000402939_chr3_66023671_-_SUCLG2_ENST00000493112_chr3_67451275_-_191aa MSKVIQKKNHWTSRVHECTVKRGPQGELGVTVLGGAEHGEFPYVGAVAAVEAAGLPGGGEGPRLGEGELLLEVQGVRVSGLPRYDVLGVI DSCKEAVTFKAVRQGXSHPCQYIWWYRQLCHHCQWDHQSLPGARTQGAPGGPAXRYFYGKKRKLYAHKTRNRKFKXEYNWYPRERRPPKS >In-frame_MAGI1_ENST00000402939_chr3_66023671_-_SUCLG2_ENST00000307227_chr3_67451275_-_183aa MSKVIQKKNHWTSRVHECTVKRGPQGELGVTVLGGAEHGEFPYVGAVAAVEAAGLPGGGEGPRLGEGELLLEVQGVRVSGLPRYDVLGVI DSCKEAVTFKAVRQGXSHPCQYIWWYRQLCHHCQWDHQSLPGARTQGAPGGPAXRNQRPRGPEDTQQQRTPHYFSHXPGGCSQEGCGQCG >In-frame_MAGI1_ENST00000483466_chr3_66023671_-_SUCLG2_ENST00000493112_chr3_67451275_-_191aa MSKVIQKKNHWTSRVHECTVKRGPQGELGVTVLGGAEHGEFPYVGAVAAVEAAGLPGGGEGPRLGEGELLLEVQGVRVSGLPRYDVLGVI DSCKEAVTFKAVRQGXSHPCQYIWWYRQLCHHCQWDHQSLPGARTQGAPGGPAXRYFYGKKRKLYAHKTRNRKFKXEYNWYPRERRPPKS >In-frame_MAGI1_ENST00000483466_chr3_66023671_-_SUCLG2_ENST00000307227_chr3_67451275_-_183aa MSKVIQKKNHWTSRVHECTVKRGPQGELGVTVLGGAEHGEFPYVGAVAAVEAAGLPGGGEGPRLGEGELLLEVQGVRVSGLPRYDVLGVI DSCKEAVTFKAVRQGXSHPCQYIWWYRQLCHHCQWDHQSLPGARTQGAPGGPAXRNQRPRGPEDTQQQRTPHYFSHXPGGCSQEGCGQCG >In-frame_MAGI1_ENST00000497477_chr3_66023671_-_SUCLG2_ENST00000493112_chr3_67451275_-_191aa MSKVIQKKNHWTSRVHECTVKRGPQGELGVTVLGGAEHGEFPYVGAVAAVEAAGLPGGGEGPRLGEGELLLEVQGVRVSGLPRYDVLGVI DSCKEAVTFKAVRQGXSHPCQYIWWYRQLCHHCQWDHQSLPGARTQGAPGGPAXRYFYGKKRKLYAHKTRNRKFKXEYNWYPRERRPPKS >In-frame_MAGI1_ENST00000497477_chr3_66023671_-_SUCLG2_ENST00000307227_chr3_67451275_-_183aa MSKVIQKKNHWTSRVHECTVKRGPQGELGVTVLGGAEHGEFPYVGAVAAVEAAGLPGGGEGPRLGEGELLLEVQGVRVSGLPRYDVLGVI DSCKEAVTFKAVRQGXSHPCQYIWWYRQLCHHCQWDHQSLPGARTQGAPGGPAXRNQRPRGPEDTQQQRTPHYFSHXPGGCSQEGCGQCG |
* Fusion transcript sequences (only coding sequence (CDS) region). |
>In-frame_MAGI1_ENST00000330909_chr3_66023671_-_SUCLG2_ENST00000493112_chr3_67451275_-_574nt ATGTCCAAAGTGATCCAGAAGAAGAACCACTGGACTAGCAGGGTTCACGAATGCACCGTGAAGCGGGGACCCCAGGGCGAGCTGGGGGTG ACGGTGCTGGGAGGCGCGGAGCACGGGGAGTTTCCGTACGTCGGAGCGGTGGCGGCGGTCGAGGCAGCGGGGCTTCCCGGCGGCGGCGAG GGCCCGAGGCTGGGCGAAGGGGAGCTGCTTCTGGAGGTGCAGGGGGTCCGGGTGTCCGGCTTGCCCCGCTATGACGTGCTGGGGGTCATC GACAGCTGCAAGGAGGCCGTCACCTTCAAGGCCGTCAGACAAGGTTGAAGCCATCCTTGTCAATATATTTGGTGGTATCGTCAACTGTGC CATCATTGCCAATGGGATCACCAAAGCCTGCCGGGAGCTAGAACTCAAGGTGCCCCTGGTGGTCCGGCTTGAAGGTACTTTTATGGAAAA AAAAGGAAGTTATATGCACATAAAACAAGAAACAGGAAATTCAAATGAGAATATAACTGGTATCCAAGAGAACGTCGCCCACCAAAATCT >In-frame_MAGI1_ENST00000330909_chr3_66023671_-_SUCLG2_ENST00000307227_chr3_67451275_-_550nt ATGTCCAAAGTGATCCAGAAGAAGAACCACTGGACTAGCAGGGTTCACGAATGCACCGTGAAGCGGGGACCCCAGGGCGAGCTGGGGGTG ACGGTGCTGGGAGGCGCGGAGCACGGGGAGTTTCCGTACGTCGGAGCGGTGGCGGCGGTCGAGGCAGCGGGGCTTCCCGGCGGCGGCGAG GGCCCGAGGCTGGGCGAAGGGGAGCTGCTTCTGGAGGTGCAGGGGGTCCGGGTGTCCGGCTTGCCCCGCTATGACGTGCTGGGGGTCATC GACAGCTGCAAGGAGGCCGTCACCTTCAAGGCCGTCAGACAAGGTTGAAGCCATCCTTGTCAATATATTTGGTGGTATCGTCAACTGTGC CATCATTGCCAATGGGATCACCAAAGCCTGCCGGGAGCTAGAACTCAAGGTGCCCCTGGTGGTCCGGCTTGAAGGAACCAACGTCCAAGA GGCCCAGAAGATACTCAACAACAGCGGACTCCCCATTACTTCAGCCATTGACCTGGAGGATGCAGCCAAGAAGGCTGTGGCCAGTGTGGC >In-frame_MAGI1_ENST00000402939_chr3_66023671_-_SUCLG2_ENST00000493112_chr3_67451275_-_574nt ATGTCCAAAGTGATCCAGAAGAAGAACCACTGGACTAGCAGGGTTCACGAATGCACCGTGAAGCGGGGACCCCAGGGCGAGCTGGGGGTG ACGGTGCTGGGAGGCGCGGAGCACGGGGAGTTTCCGTACGTCGGAGCGGTGGCGGCGGTCGAGGCAGCGGGGCTTCCCGGCGGCGGCGAG GGCCCGAGGCTGGGCGAAGGGGAGCTGCTTCTGGAGGTGCAGGGGGTCCGGGTGTCCGGCTTGCCCCGCTATGACGTGCTGGGGGTCATC GACAGCTGCAAGGAGGCCGTCACCTTCAAGGCCGTCAGACAAGGTTGAAGCCATCCTTGTCAATATATTTGGTGGTATCGTCAACTGTGC CATCATTGCCAATGGGATCACCAAAGCCTGCCGGGAGCTAGAACTCAAGGTGCCCCTGGTGGTCCGGCTTGAAGGTACTTTTATGGAAAA AAAAGGAAGTTATATGCACATAAAACAAGAAACAGGAAATTCAAATGAGAATATAACTGGTATCCAAGAGAACGTCGCCCACCAAAATCT >In-frame_MAGI1_ENST00000402939_chr3_66023671_-_SUCLG2_ENST00000307227_chr3_67451275_-_550nt ATGTCCAAAGTGATCCAGAAGAAGAACCACTGGACTAGCAGGGTTCACGAATGCACCGTGAAGCGGGGACCCCAGGGCGAGCTGGGGGTG ACGGTGCTGGGAGGCGCGGAGCACGGGGAGTTTCCGTACGTCGGAGCGGTGGCGGCGGTCGAGGCAGCGGGGCTTCCCGGCGGCGGCGAG GGCCCGAGGCTGGGCGAAGGGGAGCTGCTTCTGGAGGTGCAGGGGGTCCGGGTGTCCGGCTTGCCCCGCTATGACGTGCTGGGGGTCATC GACAGCTGCAAGGAGGCCGTCACCTTCAAGGCCGTCAGACAAGGTTGAAGCCATCCTTGTCAATATATTTGGTGGTATCGTCAACTGTGC CATCATTGCCAATGGGATCACCAAAGCCTGCCGGGAGCTAGAACTCAAGGTGCCCCTGGTGGTCCGGCTTGAAGGAACCAACGTCCAAGA GGCCCAGAAGATACTCAACAACAGCGGACTCCCCATTACTTCAGCCATTGACCTGGAGGATGCAGCCAAGAAGGCTGTGGCCAGTGTGGC >In-frame_MAGI1_ENST00000483466_chr3_66023671_-_SUCLG2_ENST00000493112_chr3_67451275_-_574nt ATGTCCAAAGTGATCCAGAAGAAGAACCACTGGACTAGCAGGGTTCACGAATGCACCGTGAAGCGGGGACCCCAGGGCGAGCTGGGGGTG ACGGTGCTGGGAGGCGCGGAGCACGGGGAGTTTCCGTACGTCGGAGCGGTGGCGGCGGTCGAGGCAGCGGGGCTTCCCGGCGGCGGCGAG GGCCCGAGGCTGGGCGAAGGGGAGCTGCTTCTGGAGGTGCAGGGGGTCCGGGTGTCCGGCTTGCCCCGCTATGACGTGCTGGGGGTCATC GACAGCTGCAAGGAGGCCGTCACCTTCAAGGCCGTCAGACAAGGTTGAAGCCATCCTTGTCAATATATTTGGTGGTATCGTCAACTGTGC CATCATTGCCAATGGGATCACCAAAGCCTGCCGGGAGCTAGAACTCAAGGTGCCCCTGGTGGTCCGGCTTGAAGGTACTTTTATGGAAAA AAAAGGAAGTTATATGCACATAAAACAAGAAACAGGAAATTCAAATGAGAATATAACTGGTATCCAAGAGAACGTCGCCCACCAAAATCT >In-frame_MAGI1_ENST00000483466_chr3_66023671_-_SUCLG2_ENST00000307227_chr3_67451275_-_550nt ATGTCCAAAGTGATCCAGAAGAAGAACCACTGGACTAGCAGGGTTCACGAATGCACCGTGAAGCGGGGACCCCAGGGCGAGCTGGGGGTG ACGGTGCTGGGAGGCGCGGAGCACGGGGAGTTTCCGTACGTCGGAGCGGTGGCGGCGGTCGAGGCAGCGGGGCTTCCCGGCGGCGGCGAG GGCCCGAGGCTGGGCGAAGGGGAGCTGCTTCTGGAGGTGCAGGGGGTCCGGGTGTCCGGCTTGCCCCGCTATGACGTGCTGGGGGTCATC GACAGCTGCAAGGAGGCCGTCACCTTCAAGGCCGTCAGACAAGGTTGAAGCCATCCTTGTCAATATATTTGGTGGTATCGTCAACTGTGC CATCATTGCCAATGGGATCACCAAAGCCTGCCGGGAGCTAGAACTCAAGGTGCCCCTGGTGGTCCGGCTTGAAGGAACCAACGTCCAAGA GGCCCAGAAGATACTCAACAACAGCGGACTCCCCATTACTTCAGCCATTGACCTGGAGGATGCAGCCAAGAAGGCTGTGGCCAGTGTGGC >In-frame_MAGI1_ENST00000497477_chr3_66023671_-_SUCLG2_ENST00000493112_chr3_67451275_-_574nt ATGTCCAAAGTGATCCAGAAGAAGAACCACTGGACTAGCAGGGTTCACGAATGCACCGTGAAGCGGGGACCCCAGGGCGAGCTGGGGGTG ACGGTGCTGGGAGGCGCGGAGCACGGGGAGTTTCCGTACGTCGGAGCGGTGGCGGCGGTCGAGGCAGCGGGGCTTCCCGGCGGCGGCGAG GGCCCGAGGCTGGGCGAAGGGGAGCTGCTTCTGGAGGTGCAGGGGGTCCGGGTGTCCGGCTTGCCCCGCTATGACGTGCTGGGGGTCATC GACAGCTGCAAGGAGGCCGTCACCTTCAAGGCCGTCAGACAAGGTTGAAGCCATCCTTGTCAATATATTTGGTGGTATCGTCAACTGTGC CATCATTGCCAATGGGATCACCAAAGCCTGCCGGGAGCTAGAACTCAAGGTGCCCCTGGTGGTCCGGCTTGAAGGTACTTTTATGGAAAA AAAAGGAAGTTATATGCACATAAAACAAGAAACAGGAAATTCAAATGAGAATATAACTGGTATCCAAGAGAACGTCGCCCACCAAAATCT >In-frame_MAGI1_ENST00000497477_chr3_66023671_-_SUCLG2_ENST00000307227_chr3_67451275_-_550nt ATGTCCAAAGTGATCCAGAAGAAGAACCACTGGACTAGCAGGGTTCACGAATGCACCGTGAAGCGGGGACCCCAGGGCGAGCTGGGGGTG ACGGTGCTGGGAGGCGCGGAGCACGGGGAGTTTCCGTACGTCGGAGCGGTGGCGGCGGTCGAGGCAGCGGGGCTTCCCGGCGGCGGCGAG GGCCCGAGGCTGGGCGAAGGGGAGCTGCTTCTGGAGGTGCAGGGGGTCCGGGTGTCCGGCTTGCCCCGCTATGACGTGCTGGGGGTCATC GACAGCTGCAAGGAGGCCGTCACCTTCAAGGCCGTCAGACAAGGTTGAAGCCATCCTTGTCAATATATTTGGTGGTATCGTCAACTGTGC CATCATTGCCAATGGGATCACCAAAGCCTGCCGGGAGCTAGAACTCAAGGTGCCCCTGGTGGTCCGGCTTGAAGGAACCAACGTCCAAGA GGCCCAGAAGATACTCAACAACAGCGGACTCCCCATTACTTCAGCCATTGACCTGGAGGATGCAGCCAAGAAGGCTGTGGCCAGTGTGGC |
* Fusion transcript sequences (Full-length transcript). |
>In-frame_MAGI1_ENST00000330909_chr3_66023671_-_SUCLG2_ENST00000493112_chr3_67451275_-_743nt ATGTCCAAAGTGATCCAGAAGAAGAACCACTGGACTAGCAGGGTTCACGAATGCACCGTGAAGCGGGGACCCCAGGGCGAGCTGGGGGTG ACGGTGCTGGGAGGCGCGGAGCACGGGGAGTTTCCGTACGTCGGAGCGGTGGCGGCGGTCGAGGCAGCGGGGCTTCCCGGCGGCGGCGAG GGCCCGAGGCTGGGCGAAGGGGAGCTGCTTCTGGAGGTGCAGGGGGTCCGGGTGTCCGGCTTGCCCCGCTATGACGTGCTGGGGGTCATC GACAGCTGCAAGGAGGCCGTCACCTTCAAGGCCGTCAGACAAGGTTGAAGCCATCCTTGTCAATATATTTGGTGGTATCGTCAACTGTGC CATCATTGCCAATGGGATCACCAAAGCCTGCCGGGAGCTAGAACTCAAGGTGCCCCTGGTGGTCCGGCTTGAAGGTACTTTTATGGAAAA AAAAGGAAGTTATATGCACATAAAACAAGAAACAGGAAATTCAAATGAGAATATAACTGGTATCCAAGAGAACGTCGCCCACCAAAATCT GAGTAAGTGTGCCATCAGCATTTTTTTATGTTAAAGATTTACTTTGCTAAGATACTTGCTGAGATTACTTTTCCAAATTAATGAATATCA TCACAAAATTATTTTTTTACATTTGGGTTCAGCTGCATGCTAATGGAAATGGAAAATGGAAGGGCATGGCTTATAGCTGTTCATTCACCA >In-frame_MAGI1_ENST00000330909_chr3_66023671_-_SUCLG2_ENST00000307227_chr3_67451275_-_1575nt ATGTCCAAAGTGATCCAGAAGAAGAACCACTGGACTAGCAGGGTTCACGAATGCACCGTGAAGCGGGGACCCCAGGGCGAGCTGGGGGTG ACGGTGCTGGGAGGCGCGGAGCACGGGGAGTTTCCGTACGTCGGAGCGGTGGCGGCGGTCGAGGCAGCGGGGCTTCCCGGCGGCGGCGAG GGCCCGAGGCTGGGCGAAGGGGAGCTGCTTCTGGAGGTGCAGGGGGTCCGGGTGTCCGGCTTGCCCCGCTATGACGTGCTGGGGGTCATC GACAGCTGCAAGGAGGCCGTCACCTTCAAGGCCGTCAGACAAGGTTGAAGCCATCCTTGTCAATATATTTGGTGGTATCGTCAACTGTGC CATCATTGCCAATGGGATCACCAAAGCCTGCCGGGAGCTAGAACTCAAGGTGCCCCTGGTGGTCCGGCTTGAAGGAACCAACGTCCAAGA GGCCCAGAAGATACTCAACAACAGCGGACTCCCCATTACTTCAGCCATTGACCTGGAGGATGCAGCCAAGAAGGCTGTGGCCAGTGTGGC CAAGAAGTGATGTCTTTGTCCTGATCCAATGGAGAAAGAAAGCCATTTTTCCGTAAAAAGGGATGGTTCATCATTGTGAAAGAAATGGTT ATCTCATTGGGGAAGAAAAGGGGAGGGGGAAGGCAAGAATCACTGAAAAATCTTAAATCTGTGTTTTCTGGAATAAGATATCTAGACAGC CTAAATCTGATTTTGGTCTTTATAAAAATAATATCTTGTGTTCTCATACTTTTCTGTCACTGTAAGCCTGCCCAGTAGGCAGTGTTTTGC AGACTTTGGGGAGTGGTCTATGTGGCCAAATATTGTGTGTATAGACAGAATTTGAAATCAAGTCCTGCTTCATTTACAAGAATTTTGGTG GGCATCTAATCCTACATAATGAAAAAGAAAAACAGACCATTTAAAAACTCAGACAAGATTATATTTAATATATTAATTACTAAAAAGGCA TAAGATTACACTGAACATATTAGCTACTAAAAAGGCACTGCTAAGACATTCAAGCAAATAGCTATTACACACTACTGCAGATTTTACAGG TTTCTAATTCTAACATATGTTTGAAAAATCCGTGAGTATTCCAAAATATATTTAATAATGGAATATCTGCATTAATATACCATCCATGTG TTTTTACCATTTGCCTTAATATTGAATATACTGTTTACCTCACACTAAAAAGAAAACCAGAAGCCTTATTTGTGATTTTGGGAGTGGAAG CTTCCATTTTTGTGTCAAAAATGAATCCTGATTCTTATGGAAATCTCTGTTATTAAGATATTTCAAGATGAGACAACACTGAAGATCAAA TTGTGTTTAGTATCACTATCTTCTCTCCTCGTTTCTCTCTTACTCCTCATCCTCCCAGAATCTACCAGTTTATGGTAGAAAGATGGGAAC CTTATTTGAATGTGTTTTTTTTTTCCATGATGTCCAATTTTGTTGTGGGAAAGGATTTGGATAAAATTTTTGTTTAAATTTTGGTAGATT >In-frame_MAGI1_ENST00000402939_chr3_66023671_-_SUCLG2_ENST00000493112_chr3_67451275_-_743nt ATGTCCAAAGTGATCCAGAAGAAGAACCACTGGACTAGCAGGGTTCACGAATGCACCGTGAAGCGGGGACCCCAGGGCGAGCTGGGGGTG ACGGTGCTGGGAGGCGCGGAGCACGGGGAGTTTCCGTACGTCGGAGCGGTGGCGGCGGTCGAGGCAGCGGGGCTTCCCGGCGGCGGCGAG GGCCCGAGGCTGGGCGAAGGGGAGCTGCTTCTGGAGGTGCAGGGGGTCCGGGTGTCCGGCTTGCCCCGCTATGACGTGCTGGGGGTCATC GACAGCTGCAAGGAGGCCGTCACCTTCAAGGCCGTCAGACAAGGTTGAAGCCATCCTTGTCAATATATTTGGTGGTATCGTCAACTGTGC CATCATTGCCAATGGGATCACCAAAGCCTGCCGGGAGCTAGAACTCAAGGTGCCCCTGGTGGTCCGGCTTGAAGGTACTTTTATGGAAAA AAAAGGAAGTTATATGCACATAAAACAAGAAACAGGAAATTCAAATGAGAATATAACTGGTATCCAAGAGAACGTCGCCCACCAAAATCT GAGTAAGTGTGCCATCAGCATTTTTTTATGTTAAAGATTTACTTTGCTAAGATACTTGCTGAGATTACTTTTCCAAATTAATGAATATCA TCACAAAATTATTTTTTTACATTTGGGTTCAGCTGCATGCTAATGGAAATGGAAAATGGAAGGGCATGGCTTATAGCTGTTCATTCACCA >In-frame_MAGI1_ENST00000402939_chr3_66023671_-_SUCLG2_ENST00000307227_chr3_67451275_-_1575nt ATGTCCAAAGTGATCCAGAAGAAGAACCACTGGACTAGCAGGGTTCACGAATGCACCGTGAAGCGGGGACCCCAGGGCGAGCTGGGGGTG ACGGTGCTGGGAGGCGCGGAGCACGGGGAGTTTCCGTACGTCGGAGCGGTGGCGGCGGTCGAGGCAGCGGGGCTTCCCGGCGGCGGCGAG GGCCCGAGGCTGGGCGAAGGGGAGCTGCTTCTGGAGGTGCAGGGGGTCCGGGTGTCCGGCTTGCCCCGCTATGACGTGCTGGGGGTCATC GACAGCTGCAAGGAGGCCGTCACCTTCAAGGCCGTCAGACAAGGTTGAAGCCATCCTTGTCAATATATTTGGTGGTATCGTCAACTGTGC CATCATTGCCAATGGGATCACCAAAGCCTGCCGGGAGCTAGAACTCAAGGTGCCCCTGGTGGTCCGGCTTGAAGGAACCAACGTCCAAGA GGCCCAGAAGATACTCAACAACAGCGGACTCCCCATTACTTCAGCCATTGACCTGGAGGATGCAGCCAAGAAGGCTGTGGCCAGTGTGGC CAAGAAGTGATGTCTTTGTCCTGATCCAATGGAGAAAGAAAGCCATTTTTCCGTAAAAAGGGATGGTTCATCATTGTGAAAGAAATGGTT ATCTCATTGGGGAAGAAAAGGGGAGGGGGAAGGCAAGAATCACTGAAAAATCTTAAATCTGTGTTTTCTGGAATAAGATATCTAGACAGC CTAAATCTGATTTTGGTCTTTATAAAAATAATATCTTGTGTTCTCATACTTTTCTGTCACTGTAAGCCTGCCCAGTAGGCAGTGTTTTGC AGACTTTGGGGAGTGGTCTATGTGGCCAAATATTGTGTGTATAGACAGAATTTGAAATCAAGTCCTGCTTCATTTACAAGAATTTTGGTG GGCATCTAATCCTACATAATGAAAAAGAAAAACAGACCATTTAAAAACTCAGACAAGATTATATTTAATATATTAATTACTAAAAAGGCA TAAGATTACACTGAACATATTAGCTACTAAAAAGGCACTGCTAAGACATTCAAGCAAATAGCTATTACACACTACTGCAGATTTTACAGG TTTCTAATTCTAACATATGTTTGAAAAATCCGTGAGTATTCCAAAATATATTTAATAATGGAATATCTGCATTAATATACCATCCATGTG TTTTTACCATTTGCCTTAATATTGAATATACTGTTTACCTCACACTAAAAAGAAAACCAGAAGCCTTATTTGTGATTTTGGGAGTGGAAG CTTCCATTTTTGTGTCAAAAATGAATCCTGATTCTTATGGAAATCTCTGTTATTAAGATATTTCAAGATGAGACAACACTGAAGATCAAA TTGTGTTTAGTATCACTATCTTCTCTCCTCGTTTCTCTCTTACTCCTCATCCTCCCAGAATCTACCAGTTTATGGTAGAAAGATGGGAAC CTTATTTGAATGTGTTTTTTTTTTCCATGATGTCCAATTTTGTTGTGGGAAAGGATTTGGATAAAATTTTTGTTTAAATTTTGGTAGATT >In-frame_MAGI1_ENST00000483466_chr3_66023671_-_SUCLG2_ENST00000493112_chr3_67451275_-_985nt CGGAATGCAAACAAAGCTCGCGGGCGCCTGTGCGGGGCTCGCGGGGAAGCCCAGAAAGTTTGTTTTATGATGGCTTGAGTGCGCGAGCGT GTGCAGGGGAGCGAGGCTGCCAAGTTTCTCTCTCCTGTTTTGTGATTTGGGGAGAGATGTTTCTCCCATGAACAAGCGGAGGCTTGGGGG CTCGTGCTGTGGGGGGCACCTGTCTCTCGTTTTATTTTTTTGGAGGAGGGGTGTAACTCATCATGTCCAAAGTGATCCAGAAGAAGAACC ACTGGACTAGCAGGGTTCACGAATGCACCGTGAAGCGGGGACCCCAGGGCGAGCTGGGGGTGACGGTGCTGGGAGGCGCGGAGCACGGGG AGTTTCCGTACGTCGGAGCGGTGGCGGCGGTCGAGGCAGCGGGGCTTCCCGGCGGCGGCGAGGGCCCGAGGCTGGGCGAAGGGGAGCTGC TTCTGGAGGTGCAGGGGGTCCGGGTGTCCGGCTTGCCCCGCTATGACGTGCTGGGGGTCATCGACAGCTGCAAGGAGGCCGTCACCTTCA AGGCCGTCAGACAAGGTTGAAGCCATCCTTGTCAATATATTTGGTGGTATCGTCAACTGTGCCATCATTGCCAATGGGATCACCAAAGCC TGCCGGGAGCTAGAACTCAAGGTGCCCCTGGTGGTCCGGCTTGAAGGTACTTTTATGGAAAAAAAAGGAAGTTATATGCACATAAAACAA GAAACAGGAAATTCAAATGAGAATATAACTGGTATCCAAGAGAACGTCGCCCACCAAAATCTGAGTAAGTGTGCCATCAGCATTTTTTTA TGTTAAAGATTTACTTTGCTAAGATACTTGCTGAGATTACTTTTCCAAATTAATGAATATCATCACAAAATTATTTTTTTACATTTGGGT >In-frame_MAGI1_ENST00000483466_chr3_66023671_-_SUCLG2_ENST00000307227_chr3_67451275_-_1817nt CGGAATGCAAACAAAGCTCGCGGGCGCCTGTGCGGGGCTCGCGGGGAAGCCCAGAAAGTTTGTTTTATGATGGCTTGAGTGCGCGAGCGT GTGCAGGGGAGCGAGGCTGCCAAGTTTCTCTCTCCTGTTTTGTGATTTGGGGAGAGATGTTTCTCCCATGAACAAGCGGAGGCTTGGGGG CTCGTGCTGTGGGGGGCACCTGTCTCTCGTTTTATTTTTTTGGAGGAGGGGTGTAACTCATCATGTCCAAAGTGATCCAGAAGAAGAACC ACTGGACTAGCAGGGTTCACGAATGCACCGTGAAGCGGGGACCCCAGGGCGAGCTGGGGGTGACGGTGCTGGGAGGCGCGGAGCACGGGG AGTTTCCGTACGTCGGAGCGGTGGCGGCGGTCGAGGCAGCGGGGCTTCCCGGCGGCGGCGAGGGCCCGAGGCTGGGCGAAGGGGAGCTGC TTCTGGAGGTGCAGGGGGTCCGGGTGTCCGGCTTGCCCCGCTATGACGTGCTGGGGGTCATCGACAGCTGCAAGGAGGCCGTCACCTTCA AGGCCGTCAGACAAGGTTGAAGCCATCCTTGTCAATATATTTGGTGGTATCGTCAACTGTGCCATCATTGCCAATGGGATCACCAAAGCC TGCCGGGAGCTAGAACTCAAGGTGCCCCTGGTGGTCCGGCTTGAAGGAACCAACGTCCAAGAGGCCCAGAAGATACTCAACAACAGCGGA CTCCCCATTACTTCAGCCATTGACCTGGAGGATGCAGCCAAGAAGGCTGTGGCCAGTGTGGCCAAGAAGTGATGTCTTTGTCCTGATCCA ATGGAGAAAGAAAGCCATTTTTCCGTAAAAAGGGATGGTTCATCATTGTGAAAGAAATGGTTATCTCATTGGGGAAGAAAAGGGGAGGGG GAAGGCAAGAATCACTGAAAAATCTTAAATCTGTGTTTTCTGGAATAAGATATCTAGACAGCCTAAATCTGATTTTGGTCTTTATAAAAA TAATATCTTGTGTTCTCATACTTTTCTGTCACTGTAAGCCTGCCCAGTAGGCAGTGTTTTGCAGACTTTGGGGAGTGGTCTATGTGGCCA AATATTGTGTGTATAGACAGAATTTGAAATCAAGTCCTGCTTCATTTACAAGAATTTTGGTGGGCATCTAATCCTACATAATGAAAAAGA AAAACAGACCATTTAAAAACTCAGACAAGATTATATTTAATATATTAATTACTAAAAAGGCATAAGATTACACTGAACATATTAGCTACT AAAAAGGCACTGCTAAGACATTCAAGCAAATAGCTATTACACACTACTGCAGATTTTACAGGTTTCTAATTCTAACATATGTTTGAAAAA TCCGTGAGTATTCCAAAATATATTTAATAATGGAATATCTGCATTAATATACCATCCATGTGTTTTTACCATTTGCCTTAATATTGAATA TACTGTTTACCTCACACTAAAAAGAAAACCAGAAGCCTTATTTGTGATTTTGGGAGTGGAAGCTTCCATTTTTGTGTCAAAAATGAATCC TGATTCTTATGGAAATCTCTGTTATTAAGATATTTCAAGATGAGACAACACTGAAGATCAAATTGTGTTTAGTATCACTATCTTCTCTCC TCGTTTCTCTCTTACTCCTCATCCTCCCAGAATCTACCAGTTTATGGTAGAAAGATGGGAACCTTATTTGAATGTGTTTTTTTTTTCCAT GATGTCCAATTTTGTTGTGGGAAAGGATTTGGATAAAATTTTTGTTTAAATTTTGGTAGATTTTTATCTATACAAATTTAAATAAAATTA >In-frame_MAGI1_ENST00000497477_chr3_66023671_-_SUCLG2_ENST00000493112_chr3_67451275_-_743nt ATGTCCAAAGTGATCCAGAAGAAGAACCACTGGACTAGCAGGGTTCACGAATGCACCGTGAAGCGGGGACCCCAGGGCGAGCTGGGGGTG ACGGTGCTGGGAGGCGCGGAGCACGGGGAGTTTCCGTACGTCGGAGCGGTGGCGGCGGTCGAGGCAGCGGGGCTTCCCGGCGGCGGCGAG GGCCCGAGGCTGGGCGAAGGGGAGCTGCTTCTGGAGGTGCAGGGGGTCCGGGTGTCCGGCTTGCCCCGCTATGACGTGCTGGGGGTCATC GACAGCTGCAAGGAGGCCGTCACCTTCAAGGCCGTCAGACAAGGTTGAAGCCATCCTTGTCAATATATTTGGTGGTATCGTCAACTGTGC CATCATTGCCAATGGGATCACCAAAGCCTGCCGGGAGCTAGAACTCAAGGTGCCCCTGGTGGTCCGGCTTGAAGGTACTTTTATGGAAAA AAAAGGAAGTTATATGCACATAAAACAAGAAACAGGAAATTCAAATGAGAATATAACTGGTATCCAAGAGAACGTCGCCCACCAAAATCT GAGTAAGTGTGCCATCAGCATTTTTTTATGTTAAAGATTTACTTTGCTAAGATACTTGCTGAGATTACTTTTCCAAATTAATGAATATCA TCACAAAATTATTTTTTTACATTTGGGTTCAGCTGCATGCTAATGGAAATGGAAAATGGAAGGGCATGGCTTATAGCTGTTCATTCACCA >In-frame_MAGI1_ENST00000497477_chr3_66023671_-_SUCLG2_ENST00000307227_chr3_67451275_-_1575nt ATGTCCAAAGTGATCCAGAAGAAGAACCACTGGACTAGCAGGGTTCACGAATGCACCGTGAAGCGGGGACCCCAGGGCGAGCTGGGGGTG ACGGTGCTGGGAGGCGCGGAGCACGGGGAGTTTCCGTACGTCGGAGCGGTGGCGGCGGTCGAGGCAGCGGGGCTTCCCGGCGGCGGCGAG GGCCCGAGGCTGGGCGAAGGGGAGCTGCTTCTGGAGGTGCAGGGGGTCCGGGTGTCCGGCTTGCCCCGCTATGACGTGCTGGGGGTCATC GACAGCTGCAAGGAGGCCGTCACCTTCAAGGCCGTCAGACAAGGTTGAAGCCATCCTTGTCAATATATTTGGTGGTATCGTCAACTGTGC CATCATTGCCAATGGGATCACCAAAGCCTGCCGGGAGCTAGAACTCAAGGTGCCCCTGGTGGTCCGGCTTGAAGGAACCAACGTCCAAGA GGCCCAGAAGATACTCAACAACAGCGGACTCCCCATTACTTCAGCCATTGACCTGGAGGATGCAGCCAAGAAGGCTGTGGCCAGTGTGGC CAAGAAGTGATGTCTTTGTCCTGATCCAATGGAGAAAGAAAGCCATTTTTCCGTAAAAAGGGATGGTTCATCATTGTGAAAGAAATGGTT ATCTCATTGGGGAAGAAAAGGGGAGGGGGAAGGCAAGAATCACTGAAAAATCTTAAATCTGTGTTTTCTGGAATAAGATATCTAGACAGC CTAAATCTGATTTTGGTCTTTATAAAAATAATATCTTGTGTTCTCATACTTTTCTGTCACTGTAAGCCTGCCCAGTAGGCAGTGTTTTGC AGACTTTGGGGAGTGGTCTATGTGGCCAAATATTGTGTGTATAGACAGAATTTGAAATCAAGTCCTGCTTCATTTACAAGAATTTTGGTG GGCATCTAATCCTACATAATGAAAAAGAAAAACAGACCATTTAAAAACTCAGACAAGATTATATTTAATATATTAATTACTAAAAAGGCA TAAGATTACACTGAACATATTAGCTACTAAAAAGGCACTGCTAAGACATTCAAGCAAATAGCTATTACACACTACTGCAGATTTTACAGG TTTCTAATTCTAACATATGTTTGAAAAATCCGTGAGTATTCCAAAATATATTTAATAATGGAATATCTGCATTAATATACCATCCATGTG TTTTTACCATTTGCCTTAATATTGAATATACTGTTTACCTCACACTAAAAAGAAAACCAGAAGCCTTATTTGTGATTTTGGGAGTGGAAG CTTCCATTTTTGTGTCAAAAATGAATCCTGATTCTTATGGAAATCTCTGTTATTAAGATATTTCAAGATGAGACAACACTGAAGATCAAA TTGTGTTTAGTATCACTATCTTCTCTCCTCGTTTCTCTCTTACTCCTCATCCTCCCAGAATCTACCAGTTTATGGTAGAAAGATGGGAAC CTTATTTGAATGTGTTTTTTTTTTCCATGATGTCCAATTTTGTTGTGGGAAAGGATTTGGATAAAATTTTTGTTTAAATTTTGGTAGATT |
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FusionGenePPI for MAGI1_SUCLG2 |
Go to ChiPPI (Chimeric Protein-Protein interactions) to see the chimeric PPI interaction in . |
Protein-protein interactors with each fusion partner protein in wild-type (BIOGRID-3.4.160) |
Hgene | Hgene's interactors | Tgene | Tgene's interactors |
MAGI1 | CTNNB1, LRP2, ASIC3, BZW1, SFN, FCHSD2, WBP1, WBP2, CDH1, NET1, SYNPO, ACTN4, ATN1, BAI1, RAC1, DDN, SSTR3, IGSF5, LATS1, LATS2, RAPGEF2, MOV10, NXF1, CYYR1, LDLRAD4, PTPN14, KCTD3, KIF13B, ZBTB21, KSR1, GIGYF1, LRFN1, DENND1A, SH3PXD2A, SRGAP2, EIF4E2, SIPA1L1, LIMA1, TESK2, DCLK1, ZNF638, RTKN, MAST3, SRSF12, PPM1H, SYDE1, DENND4C, AGAP1, CDC25B, CDK16, FAM110B, USP21, MAPKAP1, FAM53C, ANKRD34A, CGN, FAM110A, HDAC4, NF1, TBC1D25, NADK, CBY1, TIAM1, PHLDB2, KIAA1804, RASAL2, CAMSAP2, LPIN3, GAB2, CDC25C, MELK, PLEKHA7, KIF1C, GIGYF2, DEPDC1B, NAV1, DENND4A, MLLT4, STARD13, RPTOR, SH3RF3, PLEKHA5, SH3BP4, HDAC7, EDC3, LARP1, RAB3IP, INPP5E | SUCLG2 | GPR143, USP19, DMWD, CUL3, SUCLG1, SDHA, PRDX6, MRPL12, RNASET2, MRPL50, SCAF4, S100A16, SEPT9, NDUFV2, PITRM1, CTTN, SEC22B, SDHAF2, ECT2, ABCE1, ZNF146, DNAJC12, GALNT11, ACADM, ATP6V1A, CCT3, CCT6A, CTSD, HSP90B1, IDH3A, LDHA, LDHAL6A, RPN1, DLD, ETFA, OGDH, PEF1, RAB2A, AK1, FAF2, SLC25A15 |
- Retained PPIs in in-frame fusion. |
Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Still interaction with |
- Lost PPIs in in-frame fusion. |
Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Interaction lost with |
Hgene | MAGI1 | chr3:66023671 | chr3:67451275 | ENST00000330909 | - | 1 | 25 | 970_1066 | 104 | 1288 | FCHSD2 |
Hgene | MAGI1 | chr3:66023671 | chr3:67451275 | ENST00000402939 | - | 1 | 23 | 970_1066 | 104 | 1463 | FCHSD2 |
Hgene | MAGI1 | chr3:66023671 | chr3:67451275 | ENST00000483466 | - | 1 | 23 | 970_1066 | 104 | 1257 | FCHSD2 |
Hgene | MAGI1 | chr3:66023671 | chr3:67451275 | ENST00000497477 | - | 1 | 21 | 970_1066 | 104 | 1161 | FCHSD2 |
- Retained PPIs, but lost function due to frame-shift fusion. |
Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Interaction lost with |
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RelatedDrugs for MAGI1_SUCLG2 |
Drugs targeting genes involved in this fusion gene. (DrugBank Version 5.1.0 2018-04-02) |
Partner | Gene | UniProtAcc | DrugBank ID | Drug name | Drug activity | Drug type | Drug status |
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RelatedDiseases for MAGI1_SUCLG2 |
Diseases associated with fusion partners. (DisGeNet 4.0) |
Partner | Gene | Disease ID | Disease name | # pubmeds | Source |
Hgene | MAGI1 | C0005586 | Bipolar Disorder | 2 | PSYGENET |
Hgene | MAGI1 | C0010606 | Adenoid Cystic Carcinoma | 1 | CTD_human |
Hgene | MAGI1 | C0036341 | Schizophrenia | 1 | PSYGENET |
Hgene | MAGI1 | C1839839 | MAJOR AFFECTIVE DISORDER 2 | 1 | PSYGENET |
Tgene | SUCLG2 | C0014175 | Endometriosis | 1 | CTD_human |
Tgene | SUCLG2 | C0028754 | Obesity | 1 | CTD_human |
Tgene | SUCLG2 | C0268583 | Methylmalonic acidemia | 1 | CTD_human |