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Center for Computational Systems Medicine
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FusionGeneSummary

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FusionProtFeature

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FusionGeneSequence

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FusionGenePPI

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RelatedDiseases

Fusion gene ID: 20045

FusionGeneSummary for LPP_SPATA16

check button Fusion gene summary
Fusion gene informationFusion gene name: LPP_SPATA16
Fusion gene ID: 20045
HgeneTgene
Gene symbol

LPP

SPATA16

Gene ID

4026

83893

Gene nameLIM domain containing preferred translocation partner in lipomaspermatogenesis associated 16
Synonyms-NYD-SP12|SPGF6
Cytomap

3q27.3-q28

3q26.31

Type of geneprotein-codingprotein-coding
Descriptionlipoma-preferred partnerLIM proteinlipoma preferred partnerspermatogenesis-associated protein 16testicular tissue protein Li 185testis development protein NYD-SP12testis-specific Golgi protein
Modification date2018051920180522
UniProtAcc

Q93052

Q9BXB7

Ensembl transtripts involved in fusion geneENST00000448637, ENST00000312675, 
ENST00000543006, ENST00000471917, 
ENST00000351008, 
Fusion gene scores* DoF score29 X 22 X 11=70188 X 6 X 6=288
# samples 378
** MAII scorelog2(37/7018*10)=-4.24546277188585
possibly effective Gene in Pan-Cancer Fusion Genes (peGinPCFGs).
DoF>8 and MAII<0
log2(8/288*10)=-1.84799690655495
possibly effective Gene in Pan-Cancer Fusion Genes (peGinPCFGs).
DoF>8 and MAII<0
Context

PubMed: LPP [Title/Abstract] AND SPATA16 [Title/Abstract] AND fusion [Title/Abstract]

Functional or gene categories assigned by FusionGDB annotation
* DoF score (Degree of Frequency) = # partners X # break points X # cancer types
** MAII score (Major Active Isofusion Index) = log2(# samples/DoF score*10)

check button Gene ontology of each fusion partner gene with evidence of Inferred from Direct Assay (IDA) from Entrez
PartnerGeneGO IDGO termPubMed ID

check button Fusion gene information from three resources
(ChiTars (NAR, 2018), tumorfusions (NAR, 2018), Gao et al. (Cell, 2018))
* All genome coordinats were lifted-over on hg19.
* Click on the break point to see the gene structure around the break point region using the UCSC Genome Browser.
Data typeSourceCancer typeSampleHgeneHchrHbpHstrandTgeneTchrTbpTstrand
TCGALDBRCATCGA-AQ-A04L-01BLPPchr3

188584166

+SPATA16chr3

172737365

-
* LD: Li Ding group's fusion gene list
  RV: Roel Verhaak group's fusion gene list
  ChiTaRs fusion database

check button Open reading frame (ORF) analsis of fusion genes based on Ensembl gene isoform structure.
* Click on the break point to see the gene structure around the break point region using the UCSC Genome Browser.
ORFHenstTenstHgeneHchrHbpHstrandTgeneTchrTbpTstrand
intron-3CDSENST00000448637ENST00000351008LPPchr3

188584166

+SPATA16chr3

172737365

-
In-frameENST00000312675ENST00000351008LPPchr3

188584166

+SPATA16chr3

172737365

-
In-frameENST00000543006ENST00000351008LPPchr3

188584166

+SPATA16chr3

172737365

-
intron-3CDSENST00000471917ENST00000351008LPPchr3

188584166

+SPATA16chr3

172737365

-

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FusionProtFeatures for LPP_SPATA16


check buttonMain function of each fusion partner protein. (from UniProt)
HgeneTgene
LPP

Q93052

SPATA16

Q9BXB7

May play a structural role at sites of cell adhesion inmaintaining cell shape and motility. In addition to thesestructural functions, it may also be implicated in signalingevents and activation of gene transcription. May be involved insignal transduction from cell adhesion sites to the nucleusallowing successful integration of signals arising from solublefactors and cell-cell adhesion sites. Also suggested to serve as ascaffold protein upon which distinct protein complexes areassembled in the cytoplasm and in the nucleus.{ECO:0000269|PubMed:10637295, ECO:0000269|Ref.2}.

check buttonRetention analysis result of each fusion partner protein across 39 protein features of UniProt such as six molecule processing features, 13 region features, four site features, six amino acid modification features, two natural variation features, five experimental info features, and 3 secondary structure features. Here, because of limited space for viewing, we only show the protein feature retention information belong to the 13 regional features. All retention annotation result can be downloaded at

download page

.

* Minus value of BPloci means that the break pointn is located before the CDS.
- In-frame and retained protein feature among the 13 regional features.
PartnerGeneHbpTbpENSTStrandBPexonTotalExonProtein feature loci*BPlociTotalLenProtein featureProtein feature note

- In-frame and not-retained protein feature among the 13 regional features.
PartnerGeneHbpTbpENSTStrandBPexonTotalExonProtein feature loci*BPlociTotalLenProtein featureProtein feature note


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FusionGeneSequence for LPP_SPATA16


check button For in-frame fusion transcripts, we provide the fusion transcript sequences and fusion amino acid sequences.
(nt: nucleotides, aa: amino acids)

* Fusion amino acid sequences.
>In-frame_LPP_ENST00000312675_chr3_188584166_+_SPATA16_ENST00000351008_chr3_172737365_-_847aa
MSHPSWLPPKSTGEPLGHVPARMETTHSFGNPSISVSTQQPPKKFAPVVAPKPKYNPYKQPGGEGDFLPPPPPPLDDSSALPSISGNFPP
PPPLDEEAFKVQGNPGGKTLEERRSSLDAEIDSLTSILADLECSSPYKPRPPQSSTGSTASPPVSTPVTGHKRMVIPNQPPLTATKKSTL
KPQPAPQAGPIPVAPIGTLKPQPQPVPASYTTASTSSRPTFNVQVKSAQPSPHYMAAPSSGQIYGSGPQGYNTQPVPVSGQCPPPSTRGG
MDYAYIPPPGLQPEPGYGYAPNQGRYYEGYYAAGPGYGGRNDSDPTYGQQGHPNTWKREPGYTPPGAGNQNPPGMYPVTGPKKTYITDPV
SAPCAPPLQPKGGHSGQLGPSSVAPSFRPEDELEHLTKKMLYDMENPPADEYFGRCARCGENVVGEGTGCTAMDQVFHVDCFTCIICNNK
LRGQPFYAVEKKAYCEPCYINTLEQCNVCSKPIMERILRATGKAYHPHCFTCVMCHRSLDGIPFTVDAGGLIHCIEDFHKSIVLNPAYFR
NHLRQATVFRCLERYSEAARSAMIADYMFWLGGGREESISKLIKLYWQAMIEEAITRAESFSVMYTPFATKIRADKIEKVKDAFTKTHPA
YAEYMYTDLQALHMLPQTVDWSSFPPQQYLLTLGFKNKDDGKFLEKISSRKLPIFTEHKTPFGLTREDTVRQMETMGKRILPILDFIRST
QLNGSFPASSGVMEKLQYASLLSQLQRVKEQSQVINQAMAELATIPYLQDISQQEAELLQSLMADAMDTLEGRRNNNERVWNMIQKVGQI

>In-frame_LPP_ENST00000543006_chr3_188584166_+_SPATA16_ENST00000351008_chr3_172737365_-_847aa
MSHPSWLPPKSTGEPLGHVPARMETTHSFGNPSISVSTQQPPKKFAPVVAPKPKYNPYKQPGGEGDFLPPPPPPLDDSSALPSISGNFPP
PPPLDEEAFKVQGNPGGKTLEERRSSLDAEIDSLTSILADLECSSPYKPRPPQSSTGSTASPPVSTPVTGHKRMVIPNQPPLTATKKSTL
KPQPAPQAGPIPVAPIGTLKPQPQPVPASYTTASTSSRPTFNVQVKSAQPSPHYMAAPSSGQIYGSGPQGYNTQPVPVSGQCPPPSTRGG
MDYAYIPPPGLQPEPGYGYAPNQGRYYEGYYAAGPGYGGRNDSDPTYGQQGHPNTWKREPGYTPPGAGNQNPPGMYPVTGPKKTYITDPV
SAPCAPPLQPKGGHSGQLGPSSVAPSFRPEDELEHLTKKMLYDMENPPADEYFGRCARCGENVVGEGTGCTAMDQVFHVDCFTCIICNNK
LRGQPFYAVEKKAYCEPCYINTLEQCNVCSKPIMERILRATGKAYHPHCFTCVMCHRSLDGIPFTVDAGGLIHCIEDFHKSIVLNPAYFR
NHLRQATVFRCLERYSEAARSAMIADYMFWLGGGREESISKLIKLYWQAMIEEAITRAESFSVMYTPFATKIRADKIEKVKDAFTKTHPA
YAEYMYTDLQALHMLPQTVDWSSFPPQQYLLTLGFKNKDDGKFLEKISSRKLPIFTEHKTPFGLTREDTVRQMETMGKRILPILDFIRST
QLNGSFPASSGVMEKLQYASLLSQLQRVKEQSQVINQAMAELATIPYLQDISQQEAELLQSLMADAMDTLEGRRNNNERVWNMIQKVGQI


* Fusion transcript sequences (only coding sequence (CDS) region).
>In-frame_LPP_ENST00000312675_chr3_188584166_+_SPATA16_ENST00000351008_chr3_172737365_-_2541nt
ATGTCTCACCCATCTTGGCTGCCACCCAAAAGCACTGGTGAGCCCCTCGGCCATGTGCCTGCACGGATGGAGACCACCCATTCCTTTGGG
AACCCCAGCATTTCAGTGTCTACACAACAGCCACCCAAAAAGTTTGCCCCGGTAGTTGCTCCAAAACCTAAGTACAACCCATACAAACAA
CCTGGAGGTGAGGGTGATTTTCTTCCACCCCCACCTCCACCTCTAGATGATTCCAGTGCCCTTCCATCTATCTCTGGAAACTTTCCTCCT
CCACCACCTCTTGATGAAGAGGCTTTCAAAGTACAGGGGAATCCCGGAGGCAAGACACTTGAGGAGAGGCGCTCCAGCCTGGACGCTGAG
ATTGACTCCTTGACCAGCATCTTGGCTGACCTTGAGTGCAGCTCCCCCTATAAGCCTCGGCCTCCACAGAGCTCCACTGGTTCAACAGCC
TCTCCTCCAGTTTCGACCCCAGTCACAGGACACAAGAGAATGGTCATCCCGAACCAACCCCCTCTAACAGCAACCAAGAAGTCTACATTG
AAACCACAGCCTGCACCCCAGGCTGGACCCATCCCTGTGGCTCCAATCGGAACACTCAAACCCCAGCCTCAGCCAGTCCCAGCCTCCTAC
ACCACGGCCTCCACTTCTTCAAGGCCTACCTTTAATGTGCAGGTGAAGTCAGCCCAGCCCAGCCCTCATTATATGGCTGCCCCTTCATCA
GGACAAATTTATGGCTCAGGGCCCCAGGGCTATAACACTCAGCCAGTTCCTGTCTCTGGGCAGTGTCCACCTCCTTCAACACGGGGAGGC
ATGGATTATGCCTACATTCCACCACCAGGACTTCAGCCGGAGCCTGGGTATGGGTATGCCCCCAACCAGGGACGCTATTATGAAGGCTAC
TATGCAGCAGGGCCAGGCTATGGGGGCAGAAATGACTCTGACCCTACCTATGGTCAACAAGGTCACCCAAATACCTGGAAACGGGAACCA
GGGTACACTCCTCCTGGAGCAGGGAACCAGAACCCTCCTGGGATGTATCCAGTCACTGGTCCCAAGAAGACCTATATCACAGATCCTGTT
TCAGCCCCCTGTGCGCCACCATTGCAGCCAAAGGGTGGCCATTCAGGGCAACTGGGGCCTTCGTCAGTTGCCCCTTCATTCCGCCCAGAG
GATGAGCTTGAGCACCTGACCAAAAAGATGCTGTATGACATGGAAAATCCACCTGCTGACGAATACTTTGGCCGCTGTGCTCGCTGTGGA
GAAAACGTAGTTGGGGAAGGTACAGGATGCACTGCCATGGATCAGGTCTTCCACGTGGATTGTTTTACCTGCATCATCTGCAACAACAAG
CTCCGAGGGCAGCCATTCTATGCTGTGGAAAAGAAAGCATACTGCGAGCCCTGCTACATTAATACTCTGGAGCAGTGCAATGTGTGTTCC
AAGCCCATCATGGAGCGGATTCTCCGAGCCACCGGGAAGGCCTATCATCCTCACTGTTTCACCTGCGTGATGTGCCACCGCAGCCTGGAT
GGGATCCCATTCACTGTGGATGCTGGCGGGCTCATTCACTGCATTGAGGACTTCCACAAGAGCATTGTTTTAAACCCAGCCTATTTCCGG
AATCATCTTCGTCAAGCAACAGTGTTTAGATGTCTGGAGAGGTATTCAGAGGCTGCCCGGAGTGCCATGATTGCTGACTACATGTTCTGG
CTTGGTGGAGGAAGGGAAGAGAGCATAAGCAAGCTCATCAAACTGTATTGGCAGGCCATGATTGAGGAAGCCATCACCAGAGCTGAATCT
TTCTCGGTTATGTACACACCATTTGCGACAAAAATAAGAGCTGATAAAATAGAAAAAGTAAAAGATGCTTTCACAAAAACTCATCCTGCA
TATGCAGAGTATATGTACACAGATCTTCAAGCACTCCACATGTTGCCTCAGACAGTTGACTGGTCATCTTTTCCTCCCCAACAATATCTC
TTGACTCTTGGGTTCAAAAACAAAGATGATGGAAAATTTTTGGAAAAAATATCAAGCAGGAAGCTGCCGATATTCACAGAGCATAAAACA
CCTTTCGGTCTGACCAGAGAAGATACAGTGAGGCAAATGGAGACAATGGGGAAGCGAATCTTGCCAATATTGGATTTTATTAGAAGCACC
CAATTGAATGGGAGTTTTCCTGCATCCTCAGGTGTGATGGAGAAGTTGCAATATGCCAGCCTCCTCAGCCAGCTGCAGAGAGTAAAGGAG
CAGTCCCAGGTGATTAATCAAGCAATGGCAGAGCTAGCAACCATTCCCTACCTACAGGACATCAGTCAACAGGAGGCAGAATTGCTGCAG
TCACTAATGGCAGATGCTATGGACACCCTTGAAGGAAGAAGAAACAATAATGAACGTGTGTGGAATATGATCCAAAAGGTTGGACAAATT
GAAGATTTTCTATACCAATTAGAGGACAGTTTCTTAAAAACTAAAAAACTGAGAACTGCTCGAAGGCAAAAAACAAAAATGAAGCGACTT

>In-frame_LPP_ENST00000543006_chr3_188584166_+_SPATA16_ENST00000351008_chr3_172737365_-_2541nt
ATGTCTCACCCATCTTGGCTGCCACCCAAAAGCACTGGTGAGCCCCTCGGCCATGTGCCTGCACGGATGGAGACCACCCATTCCTTTGGG
AACCCCAGCATTTCAGTGTCTACACAACAGCCACCCAAAAAGTTTGCCCCGGTAGTTGCTCCAAAACCTAAGTACAACCCATACAAACAA
CCTGGAGGTGAGGGTGATTTTCTTCCACCCCCACCTCCACCTCTAGATGATTCCAGTGCCCTTCCATCTATCTCTGGAAACTTTCCTCCT
CCACCACCTCTTGATGAAGAGGCTTTCAAAGTACAGGGGAATCCCGGAGGCAAGACACTTGAGGAGAGGCGCTCCAGCCTGGACGCTGAG
ATTGACTCCTTGACCAGCATCTTGGCTGACCTTGAGTGCAGCTCCCCCTATAAGCCTCGGCCTCCACAGAGCTCCACTGGTTCAACAGCC
TCTCCTCCAGTTTCGACCCCAGTCACAGGACACAAGAGAATGGTCATCCCGAACCAACCCCCTCTAACAGCAACCAAGAAGTCTACATTG
AAACCACAGCCTGCACCCCAGGCTGGACCCATCCCTGTGGCTCCAATCGGAACACTCAAACCCCAGCCTCAGCCAGTCCCAGCCTCCTAC
ACCACGGCCTCCACTTCTTCAAGGCCTACCTTTAATGTGCAGGTGAAGTCAGCCCAGCCCAGCCCTCATTATATGGCTGCCCCTTCATCA
GGACAAATTTATGGCTCAGGGCCCCAGGGCTATAACACTCAGCCAGTTCCTGTCTCTGGGCAGTGTCCACCTCCTTCAACACGGGGAGGC
ATGGATTATGCCTACATTCCACCACCAGGACTTCAGCCGGAGCCTGGGTATGGGTATGCCCCCAACCAGGGACGCTATTATGAAGGCTAC
TATGCAGCAGGGCCAGGCTATGGGGGCAGAAATGACTCTGACCCTACCTATGGTCAACAAGGTCACCCAAATACCTGGAAACGGGAACCA
GGGTACACTCCTCCTGGAGCAGGGAACCAGAACCCTCCTGGGATGTATCCAGTCACTGGTCCCAAGAAGACCTATATCACAGATCCTGTT
TCAGCCCCCTGTGCGCCACCATTGCAGCCAAAGGGTGGCCATTCAGGGCAACTGGGGCCTTCGTCAGTTGCCCCTTCATTCCGCCCAGAG
GATGAGCTTGAGCACCTGACCAAAAAGATGCTGTATGACATGGAAAATCCACCTGCTGACGAATACTTTGGCCGCTGTGCTCGCTGTGGA
GAAAACGTAGTTGGGGAAGGTACAGGATGCACTGCCATGGATCAGGTCTTCCACGTGGATTGTTTTACCTGCATCATCTGCAACAACAAG
CTCCGAGGGCAGCCATTCTATGCTGTGGAAAAGAAAGCATACTGCGAGCCCTGCTACATTAATACTCTGGAGCAGTGCAATGTGTGTTCC
AAGCCCATCATGGAGCGGATTCTCCGAGCCACCGGGAAGGCCTATCATCCTCACTGTTTCACCTGCGTGATGTGCCACCGCAGCCTGGAT
GGGATCCCATTCACTGTGGATGCTGGCGGGCTCATTCACTGCATTGAGGACTTCCACAAGAGCATTGTTTTAAACCCAGCCTATTTCCGG
AATCATCTTCGTCAAGCAACAGTGTTTAGATGTCTGGAGAGGTATTCAGAGGCTGCCCGGAGTGCCATGATTGCTGACTACATGTTCTGG
CTTGGTGGAGGAAGGGAAGAGAGCATAAGCAAGCTCATCAAACTGTATTGGCAGGCCATGATTGAGGAAGCCATCACCAGAGCTGAATCT
TTCTCGGTTATGTACACACCATTTGCGACAAAAATAAGAGCTGATAAAATAGAAAAAGTAAAAGATGCTTTCACAAAAACTCATCCTGCA
TATGCAGAGTATATGTACACAGATCTTCAAGCACTCCACATGTTGCCTCAGACAGTTGACTGGTCATCTTTTCCTCCCCAACAATATCTC
TTGACTCTTGGGTTCAAAAACAAAGATGATGGAAAATTTTTGGAAAAAATATCAAGCAGGAAGCTGCCGATATTCACAGAGCATAAAACA
CCTTTCGGTCTGACCAGAGAAGATACAGTGAGGCAAATGGAGACAATGGGGAAGCGAATCTTGCCAATATTGGATTTTATTAGAAGCACC
CAATTGAATGGGAGTTTTCCTGCATCCTCAGGTGTGATGGAGAAGTTGCAATATGCCAGCCTCCTCAGCCAGCTGCAGAGAGTAAAGGAG
CAGTCCCAGGTGATTAATCAAGCAATGGCAGAGCTAGCAACCATTCCCTACCTACAGGACATCAGTCAACAGGAGGCAGAATTGCTGCAG
TCACTAATGGCAGATGCTATGGACACCCTTGAAGGAAGAAGAAACAATAATGAACGTGTGTGGAATATGATCCAAAAGGTTGGACAAATT
GAAGATTTTCTATACCAATTAGAGGACAGTTTCTTAAAAACTAAAAAACTGAGAACTGCTCGAAGGCAAAAAACAAAAATGAAGCGACTT


* Fusion transcript sequences (Full-length transcript).
>In-frame_LPP_ENST00000312675_chr3_188584166_+_SPATA16_ENST00000351008_chr3_172737365_-_2999nt
GTCACTTTTATTTGGGGGTGTGGACAGCTGCTTTCCCAGGGGAGTACTTCTTACAGTGGGATTTCAAGACAAGATCGGCCTGAAGAAAAA
TTATATTTGTATATTTTTTAAAAAGTGGGAACTTTGAGGCTCAGAGACAGAGCAGAAGACAGAACCTGGTCTTCTGATTCCCTGTGTTCT
GCTTTTTTCATTGTTCCACTGGACGCTCATCAGAGGGAAGATCTTTTTCCTCAATTGATTCCAACAATGTCTCACCCATCTTGGCTGCCA
CCCAAAAGCACTGGTGAGCCCCTCGGCCATGTGCCTGCACGGATGGAGACCACCCATTCCTTTGGGAACCCCAGCATTTCAGTGTCTACA
CAACAGCCACCCAAAAAGTTTGCCCCGGTAGTTGCTCCAAAACCTAAGTACAACCCATACAAACAACCTGGAGGTGAGGGTGATTTTCTT
CCACCCCCACCTCCACCTCTAGATGATTCCAGTGCCCTTCCATCTATCTCTGGAAACTTTCCTCCTCCACCACCTCTTGATGAAGAGGCT
TTCAAAGTACAGGGGAATCCCGGAGGCAAGACACTTGAGGAGAGGCGCTCCAGCCTGGACGCTGAGATTGACTCCTTGACCAGCATCTTG
GCTGACCTTGAGTGCAGCTCCCCCTATAAGCCTCGGCCTCCACAGAGCTCCACTGGTTCAACAGCCTCTCCTCCAGTTTCGACCCCAGTC
ACAGGACACAAGAGAATGGTCATCCCGAACCAACCCCCTCTAACAGCAACCAAGAAGTCTACATTGAAACCACAGCCTGCACCCCAGGCT
GGACCCATCCCTGTGGCTCCAATCGGAACACTCAAACCCCAGCCTCAGCCAGTCCCAGCCTCCTACACCACGGCCTCCACTTCTTCAAGG
CCTACCTTTAATGTGCAGGTGAAGTCAGCCCAGCCCAGCCCTCATTATATGGCTGCCCCTTCATCAGGACAAATTTATGGCTCAGGGCCC
CAGGGCTATAACACTCAGCCAGTTCCTGTCTCTGGGCAGTGTCCACCTCCTTCAACACGGGGAGGCATGGATTATGCCTACATTCCACCA
CCAGGACTTCAGCCGGAGCCTGGGTATGGGTATGCCCCCAACCAGGGACGCTATTATGAAGGCTACTATGCAGCAGGGCCAGGCTATGGG
GGCAGAAATGACTCTGACCCTACCTATGGTCAACAAGGTCACCCAAATACCTGGAAACGGGAACCAGGGTACACTCCTCCTGGAGCAGGG
AACCAGAACCCTCCTGGGATGTATCCAGTCACTGGTCCCAAGAAGACCTATATCACAGATCCTGTTTCAGCCCCCTGTGCGCCACCATTG
CAGCCAAAGGGTGGCCATTCAGGGCAACTGGGGCCTTCGTCAGTTGCCCCTTCATTCCGCCCAGAGGATGAGCTTGAGCACCTGACCAAA
AAGATGCTGTATGACATGGAAAATCCACCTGCTGACGAATACTTTGGCCGCTGTGCTCGCTGTGGAGAAAACGTAGTTGGGGAAGGTACA
GGATGCACTGCCATGGATCAGGTCTTCCACGTGGATTGTTTTACCTGCATCATCTGCAACAACAAGCTCCGAGGGCAGCCATTCTATGCT
GTGGAAAAGAAAGCATACTGCGAGCCCTGCTACATTAATACTCTGGAGCAGTGCAATGTGTGTTCCAAGCCCATCATGGAGCGGATTCTC
CGAGCCACCGGGAAGGCCTATCATCCTCACTGTTTCACCTGCGTGATGTGCCACCGCAGCCTGGATGGGATCCCATTCACTGTGGATGCT
GGCGGGCTCATTCACTGCATTGAGGACTTCCACAAGAGCATTGTTTTAAACCCAGCCTATTTCCGGAATCATCTTCGTCAAGCAACAGTG
TTTAGATGTCTGGAGAGGTATTCAGAGGCTGCCCGGAGTGCCATGATTGCTGACTACATGTTCTGGCTTGGTGGAGGAAGGGAAGAGAGC
ATAAGCAAGCTCATCAAACTGTATTGGCAGGCCATGATTGAGGAAGCCATCACCAGAGCTGAATCTTTCTCGGTTATGTACACACCATTT
GCGACAAAAATAAGAGCTGATAAAATAGAAAAAGTAAAAGATGCTTTCACAAAAACTCATCCTGCATATGCAGAGTATATGTACACAGAT
CTTCAAGCACTCCACATGTTGCCTCAGACAGTTGACTGGTCATCTTTTCCTCCCCAACAATATCTCTTGACTCTTGGGTTCAAAAACAAA
GATGATGGAAAATTTTTGGAAAAAATATCAAGCAGGAAGCTGCCGATATTCACAGAGCATAAAACACCTTTCGGTCTGACCAGAGAAGAT
ACAGTGAGGCAAATGGAGACAATGGGGAAGCGAATCTTGCCAATATTGGATTTTATTAGAAGCACCCAATTGAATGGGAGTTTTCCTGCA
TCCTCAGGTGTGATGGAGAAGTTGCAATATGCCAGCCTCCTCAGCCAGCTGCAGAGAGTAAAGGAGCAGTCCCAGGTGATTAATCAAGCA
ATGGCAGAGCTAGCAACCATTCCCTACCTACAGGACATCAGTCAACAGGAGGCAGAATTGCTGCAGTCACTAATGGCAGATGCTATGGAC
ACCCTTGAAGGAAGAAGAAACAATAATGAACGTGTGTGGAATATGATCCAAAAGGTTGGACAAATTGAAGATTTTCTATACCAATTAGAG
GACAGTTTCTTAAAAACTAAAAAACTGAGAACTGCTCGAAGGCAAAAAACAAAAATGAAGCGACTTCAAACTGTTCAGCAAAGGTAGTCA
TTAGGGAGCAGGCACTACCACTAAGATATCCCAGAAGAAGAGGCAAGGGCATCCACTCCAATGCCCACCTAGTACTGTGAAGCTGGATAA
CAAAAGCTTGTCACCAAAAGAAAGAGGTGGTATTCCCCTCAGTTCATCTTTACCAAAGACACTCTATGTTTCATTAATCTCAACTGGCAG

>In-frame_LPP_ENST00000543006_chr3_188584166_+_SPATA16_ENST00000351008_chr3_172737365_-_2942nt
GTGGGAACTTTGAGGCTCAGAGACAGAGCAGAAGACAGAACCTGGTCTTCTGATTCCCTGTGTTCTGCTTTTTTCATTGTTCCACTGGAC
GCTCATCAGAGGGAAGATCTTTTTCCTCAATTGCATTGCAGTTGGCTGAACCTTGTGTCAACCATCCATTCCAGGAGCCAGCTATCTGAG
ATTCCAACAATGTCTCACCCATCTTGGCTGCCACCCAAAAGCACTGGTGAGCCCCTCGGCCATGTGCCTGCACGGATGGAGACCACCCAT
TCCTTTGGGAACCCCAGCATTTCAGTGTCTACACAACAGCCACCCAAAAAGTTTGCCCCGGTAGTTGCTCCAAAACCTAAGTACAACCCA
TACAAACAACCTGGAGGTGAGGGTGATTTTCTTCCACCCCCACCTCCACCTCTAGATGATTCCAGTGCCCTTCCATCTATCTCTGGAAAC
TTTCCTCCTCCACCACCTCTTGATGAAGAGGCTTTCAAAGTACAGGGGAATCCCGGAGGCAAGACACTTGAGGAGAGGCGCTCCAGCCTG
GACGCTGAGATTGACTCCTTGACCAGCATCTTGGCTGACCTTGAGTGCAGCTCCCCCTATAAGCCTCGGCCTCCACAGAGCTCCACTGGT
TCAACAGCCTCTCCTCCAGTTTCGACCCCAGTCACAGGACACAAGAGAATGGTCATCCCGAACCAACCCCCTCTAACAGCAACCAAGAAG
TCTACATTGAAACCACAGCCTGCACCCCAGGCTGGACCCATCCCTGTGGCTCCAATCGGAACACTCAAACCCCAGCCTCAGCCAGTCCCA
GCCTCCTACACCACGGCCTCCACTTCTTCAAGGCCTACCTTTAATGTGCAGGTGAAGTCAGCCCAGCCCAGCCCTCATTATATGGCTGCC
CCTTCATCAGGACAAATTTATGGCTCAGGGCCCCAGGGCTATAACACTCAGCCAGTTCCTGTCTCTGGGCAGTGTCCACCTCCTTCAACA
CGGGGAGGCATGGATTATGCCTACATTCCACCACCAGGACTTCAGCCGGAGCCTGGGTATGGGTATGCCCCCAACCAGGGACGCTATTAT
GAAGGCTACTATGCAGCAGGGCCAGGCTATGGGGGCAGAAATGACTCTGACCCTACCTATGGTCAACAAGGTCACCCAAATACCTGGAAA
CGGGAACCAGGGTACACTCCTCCTGGAGCAGGGAACCAGAACCCTCCTGGGATGTATCCAGTCACTGGTCCCAAGAAGACCTATATCACA
GATCCTGTTTCAGCCCCCTGTGCGCCACCATTGCAGCCAAAGGGTGGCCATTCAGGGCAACTGGGGCCTTCGTCAGTTGCCCCTTCATTC
CGCCCAGAGGATGAGCTTGAGCACCTGACCAAAAAGATGCTGTATGACATGGAAAATCCACCTGCTGACGAATACTTTGGCCGCTGTGCT
CGCTGTGGAGAAAACGTAGTTGGGGAAGGTACAGGATGCACTGCCATGGATCAGGTCTTCCACGTGGATTGTTTTACCTGCATCATCTGC
AACAACAAGCTCCGAGGGCAGCCATTCTATGCTGTGGAAAAGAAAGCATACTGCGAGCCCTGCTACATTAATACTCTGGAGCAGTGCAAT
GTGTGTTCCAAGCCCATCATGGAGCGGATTCTCCGAGCCACCGGGAAGGCCTATCATCCTCACTGTTTCACCTGCGTGATGTGCCACCGC
AGCCTGGATGGGATCCCATTCACTGTGGATGCTGGCGGGCTCATTCACTGCATTGAGGACTTCCACAAGAGCATTGTTTTAAACCCAGCC
TATTTCCGGAATCATCTTCGTCAAGCAACAGTGTTTAGATGTCTGGAGAGGTATTCAGAGGCTGCCCGGAGTGCCATGATTGCTGACTAC
ATGTTCTGGCTTGGTGGAGGAAGGGAAGAGAGCATAAGCAAGCTCATCAAACTGTATTGGCAGGCCATGATTGAGGAAGCCATCACCAGA
GCTGAATCTTTCTCGGTTATGTACACACCATTTGCGACAAAAATAAGAGCTGATAAAATAGAAAAAGTAAAAGATGCTTTCACAAAAACT
CATCCTGCATATGCAGAGTATATGTACACAGATCTTCAAGCACTCCACATGTTGCCTCAGACAGTTGACTGGTCATCTTTTCCTCCCCAA
CAATATCTCTTGACTCTTGGGTTCAAAAACAAAGATGATGGAAAATTTTTGGAAAAAATATCAAGCAGGAAGCTGCCGATATTCACAGAG
CATAAAACACCTTTCGGTCTGACCAGAGAAGATACAGTGAGGCAAATGGAGACAATGGGGAAGCGAATCTTGCCAATATTGGATTTTATT
AGAAGCACCCAATTGAATGGGAGTTTTCCTGCATCCTCAGGTGTGATGGAGAAGTTGCAATATGCCAGCCTCCTCAGCCAGCTGCAGAGA
GTAAAGGAGCAGTCCCAGGTGATTAATCAAGCAATGGCAGAGCTAGCAACCATTCCCTACCTACAGGACATCAGTCAACAGGAGGCAGAA
TTGCTGCAGTCACTAATGGCAGATGCTATGGACACCCTTGAAGGAAGAAGAAACAATAATGAACGTGTGTGGAATATGATCCAAAAGGTT
GGACAAATTGAAGATTTTCTATACCAATTAGAGGACAGTTTCTTAAAAACTAAAAAACTGAGAACTGCTCGAAGGCAAAAAACAAAAATG
AAGCGACTTCAAACTGTTCAGCAAAGGTAGTCATTAGGGAGCAGGCACTACCACTAAGATATCCCAGAAGAAGAGGCAAGGGCATCCACT
CCAATGCCCACCTAGTACTGTGAAGCTGGATAACAAAAGCTTGTCACCAAAAGAAAGAGGTGGTATTCCCCTCAGTTCATCTTTACCAAA


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FusionGenePPI for LPP_SPATA16


check button Go to ChiPPI (Chimeric Protein-Protein interactions) to see the chimeric PPI interaction in

ChiPPI page

.

check button Protein-protein interactors with each fusion partner protein in wild-type (BIOGRID-3.4.160)
HgeneHgene's interactorsTgeneTgene's interactors
LPPATP5J2, PPP2R1A, ELAVL1, EGLN2, VHL, CLNS1A, PNPO, HNRNPL, CPT1A, HSPA5, AGFG1, ALAD, ARPC3, ARPC4, CALR, DBNL, HSPBP1, IPO11, P3H1, DPP9, EFTUD1, FEN1, FKBP10, RPRD1B, SAE1, SURF2, UFM1, NIF3L1, NPLOC4, OGT, PPME1, PPP2R5D, RANGAP1, RDX, SH3GLB1, TPRKB, UBE3A, ZPR1, SUZ12, RNF2, COPS5, GMPPA, PICALM, NINL, XPO1, CDH1, PTPN21, PPP2R3A, WDYHV1, SERPINB2, PDLIM7, LPXN, CBLC, MRPL38, WASF3, MTNR1A, G3BP1, TESSPATA16


check button - Retained PPIs in in-frame fusion.
PartnerGeneHbpTbpENSTStrandBPexonTotalExonProtein feature loci*BPlociTotalLenStill interaction with


check button - Lost PPIs in in-frame fusion.
PartnerGeneHbpTbpENSTStrandBPexonTotalExonProtein feature loci*BPlociTotalLenInteraction lost with


check button - Retained PPIs, but lost function due to frame-shift fusion.
PartnerGeneHbpTbpENSTStrandBPexonTotalExonProtein feature loci*BPlociTotalLenInteraction lost with


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RelatedDrugs for LPP_SPATA16


check button Drugs targeting genes involved in this fusion gene.
(DrugBank Version 5.1.0 2018-04-02)
PartnerGeneUniProtAccDrugBank IDDrug nameDrug activityDrug typeDrug status

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RelatedDiseases for LPP_SPATA16


check button Diseases associated with fusion partners.
(DisGeNet 4.0)
PartnerGeneDisease IDDisease name# pubmedsSource
HgeneLPPC3495559Juvenile arthritis1CTD_human
TgeneSPATA16C0403825Globozoospermia1CTD_human;UNIPROT