	FusionGeneSummary
	FusionProtFeature
	FusionGeneSequence
	FusionGenePPI
	RelatedDrugs
	RelatedDiseases

Fusion gene ID: 19794

FusionGeneSummary for LINC00894_LINC00894

Fusion gene summary

Fusion gene information	Fusion gene name: LINC00894_LINC00894
	Fusion gene ID: 19794
		Hgene	Tgene
	Gene symbol	LINC00894	LINC00894
	Gene ID	100272228	100272228
	Gene name	long intergenic non-protein coding RNA 894	long intergenic non-protein coding RNA 894
	Synonyms	-	-
	Cytomap	Xq28	Xq28
	Type of gene	ncRNA	ncRNA
	Description	-	-
	Modification date	20180514	20180514
	UniProtAcc
	Ensembl transtripts involved in fusion gene	ENST00000449111, ENST00000444489, ENST00000458274, ENST00000450989, ENST00000452864, ENST00000432696, ENST00000425602, ENST00000455777, ENST00000413076,	ENST00000449111, ENST00000444489, ENST00000458274, ENST00000450989, ENST00000452864, ENST00000432696, ENST00000425602, ENST00000455777, ENST00000413076,
Fusion gene scores	* DoF score	1 X 2 X 1=2	2 X 3 X 1=6
	# samples	2	3
	** MAII score	log2(2/2*10)=3.32192809488736	log2(3/6*10)=2.32192809488736
Context	PubMed: LINC00894 [Title/Abstract] AND LINC00894 [Title/Abstract] AND fusion [Title/Abstract]
Functional or gene categories assigned by FusionGDB annotation

* DoF score (Degree of Frequency) = # partners X # break points X # cancer types
** MAII score (Major Active Isofusion Index) = log2(# samples/DoF score*10)

Gene ontology of each fusion partner gene with evidence of Inferred from Direct Assay (IDA) from Entrez

Partner

Gene

GO ID

GO term

PubMed ID

Fusion gene information from three resources
(ChiTars (NAR, 2018), tumorfusions (NAR, 2018), Gao et al. (Cell, 2018))
* All genome coordinats were lifted-over on hg19.
* Click on the break point to see the gene structure around the break point region using the UCSC Genome Browser.

Data type	Source	Cancer type	Sample	Hgene	Hchr	Hbp	Hstrand	Tgene	Tchr	Tbp	Tstrand
ChiTaRS3.1			BE694412	LINC00894	chrX	149130935	+	LINC00894	chrX	149116267	+
ChiTaRS3.1			BE694373	LINC00894	chrX	149116267	-	LINC00894	chrX	149130935	-

* LD: Li Ding group's fusion gene list
RV: Roel Verhaak group's fusion gene list
ChiTaRs fusion database

Open reading frame (ORF) analsis of fusion genes based on Ensembl gene isoform structure.
* Click on the break point to see the gene structure around the break point region using the UCSC Genome Browser.

ORF	Henst	Tenst	Hgene	Hchr	Hbp	Hstrand	Tgene	Tchr	Tbp	Tstrand
intron-intron	ENST00000449111	ENST00000449111	LINC00894	chrX	149130935	+	LINC00894	chrX	149116267	+
intron-intron	ENST00000449111	ENST00000444489	LINC00894	chrX	149130935	+	LINC00894	chrX	149116267	+
intron-intron	ENST00000449111	ENST00000458274	LINC00894	chrX	149130935	+	LINC00894	chrX	149116267	+
intron-intron	ENST00000449111	ENST00000450989	LINC00894	chrX	149130935	+	LINC00894	chrX	149116267	+
intron-intron	ENST00000449111	ENST00000452864	LINC00894	chrX	149130935	+	LINC00894	chrX	149116267	+
intron-intron	ENST00000449111	ENST00000432696	LINC00894	chrX	149130935	+	LINC00894	chrX	149116267	+
intron-3UTR	ENST00000449111	ENST00000425602	LINC00894	chrX	149130935	+	LINC00894	chrX	149116267	+
intron-intron	ENST00000449111	ENST00000455777	LINC00894	chrX	149130935	+	LINC00894	chrX	149116267	+
intron-intron	ENST00000449111	ENST00000413076	LINC00894	chrX	149130935	+	LINC00894	chrX	149116267	+
3UTR-intron	ENST00000444489	ENST00000449111	LINC00894	chrX	149130935	+	LINC00894	chrX	149116267	+
3UTR-intron	ENST00000444489	ENST00000444489	LINC00894	chrX	149130935	+	LINC00894	chrX	149116267	+
3UTR-intron	ENST00000444489	ENST00000458274	LINC00894	chrX	149130935	+	LINC00894	chrX	149116267	+
3UTR-intron	ENST00000444489	ENST00000450989	LINC00894	chrX	149130935	+	LINC00894	chrX	149116267	+
3UTR-intron	ENST00000444489	ENST00000452864	LINC00894	chrX	149130935	+	LINC00894	chrX	149116267	+
3UTR-intron	ENST00000444489	ENST00000432696	LINC00894	chrX	149130935	+	LINC00894	chrX	149116267	+
3UTR-3UTR	ENST00000444489	ENST00000425602	LINC00894	chrX	149130935	+	LINC00894	chrX	149116267	+
3UTR-intron	ENST00000444489	ENST00000455777	LINC00894	chrX	149130935	+	LINC00894	chrX	149116267	+
3UTR-intron	ENST00000444489	ENST00000413076	LINC00894	chrX	149130935	+	LINC00894	chrX	149116267	+
intron-intron	ENST00000458274	ENST00000449111	LINC00894	chrX	149130935	+	LINC00894	chrX	149116267	+
intron-intron	ENST00000458274	ENST00000444489	LINC00894	chrX	149130935	+	LINC00894	chrX	149116267	+
intron-intron	ENST00000458274	ENST00000458274	LINC00894	chrX	149130935	+	LINC00894	chrX	149116267	+
intron-intron	ENST00000458274	ENST00000450989	LINC00894	chrX	149130935	+	LINC00894	chrX	149116267	+
intron-intron	ENST00000458274	ENST00000452864	LINC00894	chrX	149130935	+	LINC00894	chrX	149116267	+
intron-intron	ENST00000458274	ENST00000432696	LINC00894	chrX	149130935	+	LINC00894	chrX	149116267	+
intron-3UTR	ENST00000458274	ENST00000425602	LINC00894	chrX	149130935	+	LINC00894	chrX	149116267	+
intron-intron	ENST00000458274	ENST00000455777	LINC00894	chrX	149130935	+	LINC00894	chrX	149116267	+
intron-intron	ENST00000458274	ENST00000413076	LINC00894	chrX	149130935	+	LINC00894	chrX	149116267	+
intron-intron	ENST00000450989	ENST00000449111	LINC00894	chrX	149130935	+	LINC00894	chrX	149116267	+
intron-intron	ENST00000450989	ENST00000444489	LINC00894	chrX	149130935	+	LINC00894	chrX	149116267	+
intron-intron	ENST00000450989	ENST00000458274	LINC00894	chrX	149130935	+	LINC00894	chrX	149116267	+
intron-intron	ENST00000450989	ENST00000450989	LINC00894	chrX	149130935	+	LINC00894	chrX	149116267	+
intron-intron	ENST00000450989	ENST00000452864	LINC00894	chrX	149130935	+	LINC00894	chrX	149116267	+
intron-intron	ENST00000450989	ENST00000432696	LINC00894	chrX	149130935	+	LINC00894	chrX	149116267	+
intron-3UTR	ENST00000450989	ENST00000425602	LINC00894	chrX	149130935	+	LINC00894	chrX	149116267	+
intron-intron	ENST00000450989	ENST00000455777	LINC00894	chrX	149130935	+	LINC00894	chrX	149116267	+
intron-intron	ENST00000450989	ENST00000413076	LINC00894	chrX	149130935	+	LINC00894	chrX	149116267	+
intron-intron	ENST00000452864	ENST00000449111	LINC00894	chrX	149130935	+	LINC00894	chrX	149116267	+
intron-intron	ENST00000452864	ENST00000444489	LINC00894	chrX	149130935	+	LINC00894	chrX	149116267	+
intron-intron	ENST00000452864	ENST00000458274	LINC00894	chrX	149130935	+	LINC00894	chrX	149116267	+
intron-intron	ENST00000452864	ENST00000450989	LINC00894	chrX	149130935	+	LINC00894	chrX	149116267	+
intron-intron	ENST00000452864	ENST00000452864	LINC00894	chrX	149130935	+	LINC00894	chrX	149116267	+
intron-intron	ENST00000452864	ENST00000432696	LINC00894	chrX	149130935	+	LINC00894	chrX	149116267	+
intron-3UTR	ENST00000452864	ENST00000425602	LINC00894	chrX	149130935	+	LINC00894	chrX	149116267	+
intron-intron	ENST00000452864	ENST00000455777	LINC00894	chrX	149130935	+	LINC00894	chrX	149116267	+
intron-intron	ENST00000452864	ENST00000413076	LINC00894	chrX	149130935	+	LINC00894	chrX	149116267	+
intron-intron	ENST00000432696	ENST00000449111	LINC00894	chrX	149130935	+	LINC00894	chrX	149116267	+
intron-intron	ENST00000432696	ENST00000444489	LINC00894	chrX	149130935	+	LINC00894	chrX	149116267	+
intron-intron	ENST00000432696	ENST00000458274	LINC00894	chrX	149130935	+	LINC00894	chrX	149116267	+
intron-intron	ENST00000432696	ENST00000450989	LINC00894	chrX	149130935	+	LINC00894	chrX	149116267	+
intron-intron	ENST00000432696	ENST00000452864	LINC00894	chrX	149130935	+	LINC00894	chrX	149116267	+
intron-intron	ENST00000432696	ENST00000432696	LINC00894	chrX	149130935	+	LINC00894	chrX	149116267	+
intron-3UTR	ENST00000432696	ENST00000425602	LINC00894	chrX	149130935	+	LINC00894	chrX	149116267	+
intron-intron	ENST00000432696	ENST00000455777	LINC00894	chrX	149130935	+	LINC00894	chrX	149116267	+
intron-intron	ENST00000432696	ENST00000413076	LINC00894	chrX	149130935	+	LINC00894	chrX	149116267	+
intron-intron	ENST00000425602	ENST00000449111	LINC00894	chrX	149130935	+	LINC00894	chrX	149116267	+
intron-intron	ENST00000425602	ENST00000444489	LINC00894	chrX	149130935	+	LINC00894	chrX	149116267	+
intron-intron	ENST00000425602	ENST00000458274	LINC00894	chrX	149130935	+	LINC00894	chrX	149116267	+
intron-intron	ENST00000425602	ENST00000450989	LINC00894	chrX	149130935	+	LINC00894	chrX	149116267	+
intron-intron	ENST00000425602	ENST00000452864	LINC00894	chrX	149130935	+	LINC00894	chrX	149116267	+
intron-intron	ENST00000425602	ENST00000432696	LINC00894	chrX	149130935	+	LINC00894	chrX	149116267	+
intron-3UTR	ENST00000425602	ENST00000425602	LINC00894	chrX	149130935	+	LINC00894	chrX	149116267	+
intron-intron	ENST00000425602	ENST00000455777	LINC00894	chrX	149130935	+	LINC00894	chrX	149116267	+
intron-intron	ENST00000425602	ENST00000413076	LINC00894	chrX	149130935	+	LINC00894	chrX	149116267	+
3UTR-intron	ENST00000455777	ENST00000449111	LINC00894	chrX	149130935	+	LINC00894	chrX	149116267	+
3UTR-intron	ENST00000455777	ENST00000444489	LINC00894	chrX	149130935	+	LINC00894	chrX	149116267	+
3UTR-intron	ENST00000455777	ENST00000458274	LINC00894	chrX	149130935	+	LINC00894	chrX	149116267	+
3UTR-intron	ENST00000455777	ENST00000450989	LINC00894	chrX	149130935	+	LINC00894	chrX	149116267	+
3UTR-intron	ENST00000455777	ENST00000452864	LINC00894	chrX	149130935	+	LINC00894	chrX	149116267	+
3UTR-intron	ENST00000455777	ENST00000432696	LINC00894	chrX	149130935	+	LINC00894	chrX	149116267	+
3UTR-3UTR	ENST00000455777	ENST00000425602	LINC00894	chrX	149130935	+	LINC00894	chrX	149116267	+
3UTR-intron	ENST00000455777	ENST00000455777	LINC00894	chrX	149130935	+	LINC00894	chrX	149116267	+
3UTR-intron	ENST00000455777	ENST00000413076	LINC00894	chrX	149130935	+	LINC00894	chrX	149116267	+
intron-intron	ENST00000413076	ENST00000449111	LINC00894	chrX	149130935	+	LINC00894	chrX	149116267	+
intron-intron	ENST00000413076	ENST00000444489	LINC00894	chrX	149130935	+	LINC00894	chrX	149116267	+
intron-intron	ENST00000413076	ENST00000458274	LINC00894	chrX	149130935	+	LINC00894	chrX	149116267	+
intron-intron	ENST00000413076	ENST00000450989	LINC00894	chrX	149130935	+	LINC00894	chrX	149116267	+
intron-intron	ENST00000413076	ENST00000452864	LINC00894	chrX	149130935	+	LINC00894	chrX	149116267	+
intron-intron	ENST00000413076	ENST00000432696	LINC00894	chrX	149130935	+	LINC00894	chrX	149116267	+
intron-3UTR	ENST00000413076	ENST00000425602	LINC00894	chrX	149130935	+	LINC00894	chrX	149116267	+
intron-intron	ENST00000413076	ENST00000455777	LINC00894	chrX	149130935	+	LINC00894	chrX	149116267	+
intron-intron	ENST00000413076	ENST00000413076	LINC00894	chrX	149130935	+	LINC00894	chrX	149116267	+
intron-intron	ENST00000449111	ENST00000449111	LINC00894	chrX	149116267	-	LINC00894	chrX	149130935	-
intron-intron	ENST00000449111	ENST00000444489	LINC00894	chrX	149116267	-	LINC00894	chrX	149130935	-
intron-intron	ENST00000449111	ENST00000458274	LINC00894	chrX	149116267	-	LINC00894	chrX	149130935	-
intron-intron	ENST00000449111	ENST00000450989	LINC00894	chrX	149116267	-	LINC00894	chrX	149130935	-
intron-intron	ENST00000449111	ENST00000452864	LINC00894	chrX	149116267	-	LINC00894	chrX	149130935	-
intron-intron	ENST00000449111	ENST00000432696	LINC00894	chrX	149116267	-	LINC00894	chrX	149130935	-
intron-intron	ENST00000449111	ENST00000425602	LINC00894	chrX	149116267	-	LINC00894	chrX	149130935	-
intron-3UTR	ENST00000449111	ENST00000455777	LINC00894	chrX	149116267	-	LINC00894	chrX	149130935	-
intron-intron	ENST00000449111	ENST00000413076	LINC00894	chrX	149116267	-	LINC00894	chrX	149130935	-
intron-intron	ENST00000444489	ENST00000449111	LINC00894	chrX	149116267	-	LINC00894	chrX	149130935	-
intron-intron	ENST00000444489	ENST00000444489	LINC00894	chrX	149116267	-	LINC00894	chrX	149130935	-
intron-intron	ENST00000444489	ENST00000458274	LINC00894	chrX	149116267	-	LINC00894	chrX	149130935	-
intron-intron	ENST00000444489	ENST00000450989	LINC00894	chrX	149116267	-	LINC00894	chrX	149130935	-
intron-intron	ENST00000444489	ENST00000452864	LINC00894	chrX	149116267	-	LINC00894	chrX	149130935	-
intron-intron	ENST00000444489	ENST00000432696	LINC00894	chrX	149116267	-	LINC00894	chrX	149130935	-
intron-intron	ENST00000444489	ENST00000425602	LINC00894	chrX	149116267	-	LINC00894	chrX	149130935	-
intron-3UTR	ENST00000444489	ENST00000455777	LINC00894	chrX	149116267	-	LINC00894	chrX	149130935	-
intron-intron	ENST00000444489	ENST00000413076	LINC00894	chrX	149116267	-	LINC00894	chrX	149130935	-
intron-intron	ENST00000458274	ENST00000449111	LINC00894	chrX	149116267	-	LINC00894	chrX	149130935	-
intron-intron	ENST00000458274	ENST00000444489	LINC00894	chrX	149116267	-	LINC00894	chrX	149130935	-
intron-intron	ENST00000458274	ENST00000458274	LINC00894	chrX	149116267	-	LINC00894	chrX	149130935	-
intron-intron	ENST00000458274	ENST00000450989	LINC00894	chrX	149116267	-	LINC00894	chrX	149130935	-
intron-intron	ENST00000458274	ENST00000452864	LINC00894	chrX	149116267	-	LINC00894	chrX	149130935	-
intron-intron	ENST00000458274	ENST00000432696	LINC00894	chrX	149116267	-	LINC00894	chrX	149130935	-
intron-intron	ENST00000458274	ENST00000425602	LINC00894	chrX	149116267	-	LINC00894	chrX	149130935	-
intron-3UTR	ENST00000458274	ENST00000455777	LINC00894	chrX	149116267	-	LINC00894	chrX	149130935	-
intron-intron	ENST00000458274	ENST00000413076	LINC00894	chrX	149116267	-	LINC00894	chrX	149130935	-
intron-intron	ENST00000450989	ENST00000449111	LINC00894	chrX	149116267	-	LINC00894	chrX	149130935	-
intron-intron	ENST00000450989	ENST00000444489	LINC00894	chrX	149116267	-	LINC00894	chrX	149130935	-
intron-intron	ENST00000450989	ENST00000458274	LINC00894	chrX	149116267	-	LINC00894	chrX	149130935	-
intron-intron	ENST00000450989	ENST00000450989	LINC00894	chrX	149116267	-	LINC00894	chrX	149130935	-
intron-intron	ENST00000450989	ENST00000452864	LINC00894	chrX	149116267	-	LINC00894	chrX	149130935	-
intron-intron	ENST00000450989	ENST00000432696	LINC00894	chrX	149116267	-	LINC00894	chrX	149130935	-
intron-intron	ENST00000450989	ENST00000425602	LINC00894	chrX	149116267	-	LINC00894	chrX	149130935	-
intron-3UTR	ENST00000450989	ENST00000455777	LINC00894	chrX	149116267	-	LINC00894	chrX	149130935	-
intron-intron	ENST00000450989	ENST00000413076	LINC00894	chrX	149116267	-	LINC00894	chrX	149130935	-
intron-intron	ENST00000452864	ENST00000449111	LINC00894	chrX	149116267	-	LINC00894	chrX	149130935	-
intron-intron	ENST00000452864	ENST00000444489	LINC00894	chrX	149116267	-	LINC00894	chrX	149130935	-
intron-intron	ENST00000452864	ENST00000458274	LINC00894	chrX	149116267	-	LINC00894	chrX	149130935	-
intron-intron	ENST00000452864	ENST00000450989	LINC00894	chrX	149116267	-	LINC00894	chrX	149130935	-
intron-intron	ENST00000452864	ENST00000452864	LINC00894	chrX	149116267	-	LINC00894	chrX	149130935	-
intron-intron	ENST00000452864	ENST00000432696	LINC00894	chrX	149116267	-	LINC00894	chrX	149130935	-
intron-intron	ENST00000452864	ENST00000425602	LINC00894	chrX	149116267	-	LINC00894	chrX	149130935	-
intron-3UTR	ENST00000452864	ENST00000455777	LINC00894	chrX	149116267	-	LINC00894	chrX	149130935	-
intron-intron	ENST00000452864	ENST00000413076	LINC00894	chrX	149116267	-	LINC00894	chrX	149130935	-
intron-intron	ENST00000432696	ENST00000449111	LINC00894	chrX	149116267	-	LINC00894	chrX	149130935	-
intron-intron	ENST00000432696	ENST00000444489	LINC00894	chrX	149116267	-	LINC00894	chrX	149130935	-
intron-intron	ENST00000432696	ENST00000458274	LINC00894	chrX	149116267	-	LINC00894	chrX	149130935	-
intron-intron	ENST00000432696	ENST00000450989	LINC00894	chrX	149116267	-	LINC00894	chrX	149130935	-
intron-intron	ENST00000432696	ENST00000452864	LINC00894	chrX	149116267	-	LINC00894	chrX	149130935	-
intron-intron	ENST00000432696	ENST00000432696	LINC00894	chrX	149116267	-	LINC00894	chrX	149130935	-
intron-intron	ENST00000432696	ENST00000425602	LINC00894	chrX	149116267	-	LINC00894	chrX	149130935	-
intron-3UTR	ENST00000432696	ENST00000455777	LINC00894	chrX	149116267	-	LINC00894	chrX	149130935	-
intron-intron	ENST00000432696	ENST00000413076	LINC00894	chrX	149116267	-	LINC00894	chrX	149130935	-
3UTR-intron	ENST00000425602	ENST00000449111	LINC00894	chrX	149116267	-	LINC00894	chrX	149130935	-
3UTR-intron	ENST00000425602	ENST00000444489	LINC00894	chrX	149116267	-	LINC00894	chrX	149130935	-
3UTR-intron	ENST00000425602	ENST00000458274	LINC00894	chrX	149116267	-	LINC00894	chrX	149130935	-
3UTR-intron	ENST00000425602	ENST00000450989	LINC00894	chrX	149116267	-	LINC00894	chrX	149130935	-
3UTR-intron	ENST00000425602	ENST00000452864	LINC00894	chrX	149116267	-	LINC00894	chrX	149130935	-
3UTR-intron	ENST00000425602	ENST00000432696	LINC00894	chrX	149116267	-	LINC00894	chrX	149130935	-
3UTR-intron	ENST00000425602	ENST00000425602	LINC00894	chrX	149116267	-	LINC00894	chrX	149130935	-
3UTR-3UTR	ENST00000425602	ENST00000455777	LINC00894	chrX	149116267	-	LINC00894	chrX	149130935	-
3UTR-intron	ENST00000425602	ENST00000413076	LINC00894	chrX	149116267	-	LINC00894	chrX	149130935	-
intron-intron	ENST00000455777	ENST00000449111	LINC00894	chrX	149116267	-	LINC00894	chrX	149130935	-
intron-intron	ENST00000455777	ENST00000444489	LINC00894	chrX	149116267	-	LINC00894	chrX	149130935	-
intron-intron	ENST00000455777	ENST00000458274	LINC00894	chrX	149116267	-	LINC00894	chrX	149130935	-
intron-intron	ENST00000455777	ENST00000450989	LINC00894	chrX	149116267	-	LINC00894	chrX	149130935	-
intron-intron	ENST00000455777	ENST00000452864	LINC00894	chrX	149116267	-	LINC00894	chrX	149130935	-
intron-intron	ENST00000455777	ENST00000432696	LINC00894	chrX	149116267	-	LINC00894	chrX	149130935	-
intron-intron	ENST00000455777	ENST00000425602	LINC00894	chrX	149116267	-	LINC00894	chrX	149130935	-
intron-3UTR	ENST00000455777	ENST00000455777	LINC00894	chrX	149116267	-	LINC00894	chrX	149130935	-
intron-intron	ENST00000455777	ENST00000413076	LINC00894	chrX	149116267	-	LINC00894	chrX	149130935	-
intron-intron	ENST00000413076	ENST00000449111	LINC00894	chrX	149116267	-	LINC00894	chrX	149130935	-
intron-intron	ENST00000413076	ENST00000444489	LINC00894	chrX	149116267	-	LINC00894	chrX	149130935	-
intron-intron	ENST00000413076	ENST00000458274	LINC00894	chrX	149116267	-	LINC00894	chrX	149130935	-
intron-intron	ENST00000413076	ENST00000450989	LINC00894	chrX	149116267	-	LINC00894	chrX	149130935	-
intron-intron	ENST00000413076	ENST00000452864	LINC00894	chrX	149116267	-	LINC00894	chrX	149130935	-
intron-intron	ENST00000413076	ENST00000432696	LINC00894	chrX	149116267	-	LINC00894	chrX	149130935	-
intron-intron	ENST00000413076	ENST00000425602	LINC00894	chrX	149116267	-	LINC00894	chrX	149130935	-
intron-3UTR	ENST00000413076	ENST00000455777	LINC00894	chrX	149116267	-	LINC00894	chrX	149130935	-
intron-intron	ENST00000413076	ENST00000413076	LINC00894	chrX	149116267	-	LINC00894	chrX	149130935	-

Top

FusionProtFeatures for LINC00894_LINC00894

Main function of each fusion partner protein. (from UniProt)

Hgene	Tgene
LINC00894	LINC00894
Lectin that binds to various sugars: galactose > mannose= fucose > N-acetylglucosamine > N-acetylgalactosamine(PubMed:10224141). Acts as a chemoattractant, probably involved inthe regulation of cell migration (PubMed:28301481).{ECO:0000269\|PubMed:10224141, ECO:0000269\|PubMed:28301481}.	Lectin that binds to various sugars: galactose > mannose= fucose > N-acetylglucosamine > N-acetylgalactosamine(PubMed:10224141). Acts as a chemoattractant, probably involved inthe regulation of cell migration (PubMed:28301481).{ECO:0000269\|PubMed:10224141, ECO:0000269\|PubMed:28301481}.

Retention analysis result of each fusion partner protein across 39 protein features of UniProt such as six molecule processing features, 13 region features, four site features, six amino acid modification features, two natural variation features, five experimental info features, and 3 secondary structure features. Here, because of limited space for viewing, we only show the protein feature retention information belong to the 13 regional features. All retention annotation result can be downloaded at
download page
.

* Minus value of BPloci means that the break pointn is located before the CDS.

- In-frame and retained protein feature among the 13 regional features.

Partner

Gene

Hbp

Tbp

ENST

Strand

BPexon

TotalExon

Protein feature loci

*BPloci

TotalLen

Protein feature

Protein feature note

- In-frame and not-retained protein feature among the 13 regional features.

Partner

Gene

Hbp

Tbp

ENST

Strand

BPexon

TotalExon

Protein feature loci

*BPloci

TotalLen

Protein feature

Protein feature note

Top

FusionGeneSequence for LINC00894_LINC00894

For in-frame fusion transcripts, we provide the fusion transcript sequences and fusion amino acid sequences.
(nt: nucleotides, aa: amino acids)

* Fusion amino acid sequences.

* Fusion transcript sequences (only coding sequence (CDS) region).

* Fusion transcript sequences (Full-length transcript).

Top

FusionGenePPI for LINC00894_LINC00894

Go to ChiPPI (Chimeric Protein-Protein interactions) to see the chimeric PPI interaction in
ChiPPI page
.

Protein-protein interactors with each fusion partner protein in wild-type (BIOGRID-3.4.160)

Hgene

Hgene's interactors

Tgene

Tgene's interactors

- Retained PPIs in in-frame fusion.

Partner

Gene

Hbp

Tbp

ENST

Strand

BPexon

TotalExon

Protein feature loci

*BPloci

TotalLen

Still interaction with

- Lost PPIs in in-frame fusion.

Partner

Gene

Hbp

Tbp

ENST

Strand

BPexon

TotalExon

Protein feature loci

*BPloci

TotalLen

Interaction lost with

- Retained PPIs, but lost function due to frame-shift fusion.

Partner

Gene

Hbp

Tbp

ENST

Strand

BPexon

TotalExon

Protein feature loci

*BPloci

TotalLen

Interaction lost with

Top

RelatedDrugs for LINC00894_LINC00894

Drugs targeting genes involved in this fusion gene.
(DrugBank Version 5.1.0 2018-04-02)

Partner

Gene

UniProtAcc

DrugBank ID

Drug name

Drug activity

Drug type

Drug status

Top

RelatedDiseases for LINC00894_LINC00894

Diseases associated with fusion partners.
(DisGeNet 4.0)

Partner

Gene

Disease ID

Disease name

# pubmeds

Source

Home

Download

Statistics

Examples

Help

Contact

Fusion gene ID: 19794

FusionGeneSummary for LINC00894_LINC00894

FusionProtFeatures for LINC00894_LINC00894

FusionGeneSequence for LINC00894_LINC00894

FusionGenePPI for LINC00894_LINC00894

RelatedDrugs for LINC00894_LINC00894

RelatedDiseases for LINC00894_LINC00894