![]() |
||||||
|
![]() | |
![]() | |
![]() | |
![]() | |
![]() | |
![]() |
Fusion gene ID: 1973 |
FusionGeneSummary for ANTXR2_RNF111 |
![]() |
Fusion gene information | Fusion gene name: ANTXR2_RNF111 | Fusion gene ID: 1973 | Hgene | Tgene | Gene symbol | ANTXR2 | RNF111 | Gene ID | 118429 | 54778 |
Gene name | ANTXR cell adhesion molecule 2 | ring finger protein 111 | |
Synonyms | CMG-2|CMG2|HFS|ISH|JHF | ARK|hRNF111 | |
Cytomap | 4q21.21 | 15q22.1-q22.2 | |
Type of gene | protein-coding | protein-coding | |
Description | anthrax toxin receptor 2capillary morphogenesis gene 2 proteincapillary morphogenesis protein 2 | E3 ubiquitin-protein ligase ArkadiaArkadiaRING-type E3 ubiquitin transferase Arkadia | |
Modification date | 20180523 | 20180523 | |
UniProtAcc | P58335 | Q6ZNA4 | |
Ensembl transtripts involved in fusion gene | ENST00000403729, ENST00000482406, ENST00000404191, ENST00000346652, ENST00000307333, ENST00000295465, | ENST00000348370, ENST00000434298, ENST00000559209, ENST00000557998, ENST00000561186, ENST00000560080, | |
Fusion gene scores | * DoF score | 5 X 6 X 3=90 | 7 X 6 X 5=210 |
# samples | 8 | 7 | |
** MAII score | log2(8/90*10)=-0.169925001442312 possibly effective Gene in Pan-Cancer Fusion Genes (peGinPCFGs). DoF>8 and MAII<0 | log2(7/210*10)=-1.58496250072116 possibly effective Gene in Pan-Cancer Fusion Genes (peGinPCFGs). DoF>8 and MAII<0 | |
Context | PubMed: ANTXR2 [Title/Abstract] AND RNF111 [Title/Abstract] AND fusion [Title/Abstract] | ||
Functional or gene categories assigned by FusionGDB annotation |
* DoF score (Degree of Frequency) = # partners X # break points X # cancer types ** MAII score (Major Active Isofusion Index) = log2(# samples/DoF score*10) |
![]() |
Partner | Gene | GO ID | GO term | PubMed ID |
![]() (ChiTars (NAR, 2018), tumorfusions (NAR, 2018), Gao et al. (Cell, 2018)) * All genome coordinats were lifted-over on hg19. * Click on the break point to see the gene structure around the break point region using the UCSC Genome Browser. |
Data type | Source | Cancer type | Sample | Hgene | Hchr | Hbp | Hstrand | Tgene | Tchr | Tbp | Tstrand |
ChiTaRS3.1 | BF329240 | ANTXR2 | chr4 | 80901389 | - | RNF111 | chr15 | 59359150 | - |
* LD: Li Ding group's fusion gene list RV: Roel Verhaak group's fusion gene list ChiTaRs fusion database |
![]() * Click on the break point to see the gene structure around the break point region using the UCSC Genome Browser. |
ORF | Henst | Tenst | Hgene | Hchr | Hbp | Hstrand | Tgene | Tchr | Tbp | Tstrand |
intron-3CDS | ENST00000403729 | ENST00000348370 | ANTXR2 | chr4 | 80901389 | - | RNF111 | chr15 | 59359150 | - |
intron-3CDS | ENST00000403729 | ENST00000434298 | ANTXR2 | chr4 | 80901389 | - | RNF111 | chr15 | 59359150 | - |
intron-3CDS | ENST00000403729 | ENST00000559209 | ANTXR2 | chr4 | 80901389 | - | RNF111 | chr15 | 59359150 | - |
intron-3CDS | ENST00000403729 | ENST00000557998 | ANTXR2 | chr4 | 80901389 | - | RNF111 | chr15 | 59359150 | - |
intron-3CDS | ENST00000403729 | ENST00000561186 | ANTXR2 | chr4 | 80901389 | - | RNF111 | chr15 | 59359150 | - |
intron-intron | ENST00000403729 | ENST00000560080 | ANTXR2 | chr4 | 80901389 | - | RNF111 | chr15 | 59359150 | - |
intron-3CDS | ENST00000482406 | ENST00000348370 | ANTXR2 | chr4 | 80901389 | - | RNF111 | chr15 | 59359150 | - |
intron-3CDS | ENST00000482406 | ENST00000434298 | ANTXR2 | chr4 | 80901389 | - | RNF111 | chr15 | 59359150 | - |
intron-3CDS | ENST00000482406 | ENST00000559209 | ANTXR2 | chr4 | 80901389 | - | RNF111 | chr15 | 59359150 | - |
intron-3CDS | ENST00000482406 | ENST00000557998 | ANTXR2 | chr4 | 80901389 | - | RNF111 | chr15 | 59359150 | - |
intron-3CDS | ENST00000482406 | ENST00000561186 | ANTXR2 | chr4 | 80901389 | - | RNF111 | chr15 | 59359150 | - |
intron-intron | ENST00000482406 | ENST00000560080 | ANTXR2 | chr4 | 80901389 | - | RNF111 | chr15 | 59359150 | - |
intron-3CDS | ENST00000404191 | ENST00000348370 | ANTXR2 | chr4 | 80901389 | - | RNF111 | chr15 | 59359150 | - |
intron-3CDS | ENST00000404191 | ENST00000434298 | ANTXR2 | chr4 | 80901389 | - | RNF111 | chr15 | 59359150 | - |
intron-3CDS | ENST00000404191 | ENST00000559209 | ANTXR2 | chr4 | 80901389 | - | RNF111 | chr15 | 59359150 | - |
intron-3CDS | ENST00000404191 | ENST00000557998 | ANTXR2 | chr4 | 80901389 | - | RNF111 | chr15 | 59359150 | - |
intron-3CDS | ENST00000404191 | ENST00000561186 | ANTXR2 | chr4 | 80901389 | - | RNF111 | chr15 | 59359150 | - |
intron-intron | ENST00000404191 | ENST00000560080 | ANTXR2 | chr4 | 80901389 | - | RNF111 | chr15 | 59359150 | - |
intron-3CDS | ENST00000346652 | ENST00000348370 | ANTXR2 | chr4 | 80901389 | - | RNF111 | chr15 | 59359150 | - |
intron-3CDS | ENST00000346652 | ENST00000434298 | ANTXR2 | chr4 | 80901389 | - | RNF111 | chr15 | 59359150 | - |
intron-3CDS | ENST00000346652 | ENST00000559209 | ANTXR2 | chr4 | 80901389 | - | RNF111 | chr15 | 59359150 | - |
intron-3CDS | ENST00000346652 | ENST00000557998 | ANTXR2 | chr4 | 80901389 | - | RNF111 | chr15 | 59359150 | - |
intron-3CDS | ENST00000346652 | ENST00000561186 | ANTXR2 | chr4 | 80901389 | - | RNF111 | chr15 | 59359150 | - |
intron-intron | ENST00000346652 | ENST00000560080 | ANTXR2 | chr4 | 80901389 | - | RNF111 | chr15 | 59359150 | - |
intron-3CDS | ENST00000307333 | ENST00000348370 | ANTXR2 | chr4 | 80901389 | - | RNF111 | chr15 | 59359150 | - |
intron-3CDS | ENST00000307333 | ENST00000434298 | ANTXR2 | chr4 | 80901389 | - | RNF111 | chr15 | 59359150 | - |
intron-3CDS | ENST00000307333 | ENST00000559209 | ANTXR2 | chr4 | 80901389 | - | RNF111 | chr15 | 59359150 | - |
intron-3CDS | ENST00000307333 | ENST00000557998 | ANTXR2 | chr4 | 80901389 | - | RNF111 | chr15 | 59359150 | - |
intron-3CDS | ENST00000307333 | ENST00000561186 | ANTXR2 | chr4 | 80901389 | - | RNF111 | chr15 | 59359150 | - |
intron-intron | ENST00000307333 | ENST00000560080 | ANTXR2 | chr4 | 80901389 | - | RNF111 | chr15 | 59359150 | - |
intron-3CDS | ENST00000295465 | ENST00000348370 | ANTXR2 | chr4 | 80901389 | - | RNF111 | chr15 | 59359150 | - |
intron-3CDS | ENST00000295465 | ENST00000434298 | ANTXR2 | chr4 | 80901389 | - | RNF111 | chr15 | 59359150 | - |
intron-3CDS | ENST00000295465 | ENST00000559209 | ANTXR2 | chr4 | 80901389 | - | RNF111 | chr15 | 59359150 | - |
intron-3CDS | ENST00000295465 | ENST00000557998 | ANTXR2 | chr4 | 80901389 | - | RNF111 | chr15 | 59359150 | - |
intron-3CDS | ENST00000295465 | ENST00000561186 | ANTXR2 | chr4 | 80901389 | - | RNF111 | chr15 | 59359150 | - |
intron-intron | ENST00000295465 | ENST00000560080 | ANTXR2 | chr4 | 80901389 | - | RNF111 | chr15 | 59359150 | - |
Top |
FusionProtFeatures for ANTXR2_RNF111 |
![]() |
Hgene | Tgene |
ANTXR2 | RNF111 |
Necessary for cellular interactions with laminin and theextracellular matrix. {ECO:0000269|PubMed:11683410,ECO:0000269|PubMed:12973667}. |
![]() * Minus value of BPloci means that the break pointn is located before the CDS. |
- In-frame and retained protein feature among the 13 regional features. |
Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Protein feature | Protein feature note |
- In-frame and not-retained protein feature among the 13 regional features. |
Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Protein feature | Protein feature note |
Top |
FusionGeneSequence for ANTXR2_RNF111 |
![]() (nt: nucleotides, aa: amino acids) |
* Fusion amino acid sequences. |
* Fusion transcript sequences (only coding sequence (CDS) region). |
* Fusion transcript sequences (Full-length transcript). |
Top |
FusionGenePPI for ANTXR2_RNF111 |
![]() |
![]() |
Hgene | Hgene's interactors | Tgene | Tgene's interactors |
![]() |
Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Still interaction with |
![]() |
Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Interaction lost with |
![]() |
Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Interaction lost with |
Top |
RelatedDrugs for ANTXR2_RNF111 |
![]() (DrugBank Version 5.1.0 2018-04-02) |
Partner | Gene | UniProtAcc | DrugBank ID | Drug name | Drug activity | Drug type | Drug status |
Top |
RelatedDiseases for ANTXR2_RNF111 |
![]() (DisGeNet 4.0) |
Partner | Gene | Disease ID | Disease name | # pubmeds | Source |
Hgene | ANTXR2 | C0009917 | Contracture | 2 | CTD_human |
Hgene | ANTXR2 | C0016045 | fibroma | 2 | CTD_human |
Hgene | ANTXR2 | C0017567 | Gingival Hypertrophy | 2 | CTD_human |
Hgene | ANTXR2 | C0038013 | Ankylosing spondylitis | 2 | CTD_human |
Hgene | ANTXR2 | C2745948 | Hyalinosis, Systemic | 2 | CTD_human;ORPHANET;UNIPROT |
Hgene | ANTXR2 | C0029456 | Osteoporosis | 1 | CTD_human |
Hgene | ANTXR2 | C0221204 | Lytic lesion | 1 | CTD_human |