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Fusion gene ID: 19658 |
FusionGeneSummary for LGALS8_WAC |
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Fusion gene information | Fusion gene name: LGALS8_WAC | Fusion gene ID: 19658 | Hgene | Tgene | Gene symbol | LGALS8 | WAC | Gene ID | 3964 | 51322 |
Gene name | galectin 8 | WW domain containing adaptor with coiled-coil | |
Synonyms | Gal-8|PCTA-1|PCTA1|Po66-CBP | BM-016|DESSH|PRO1741|Wwp4 | |
Cytomap | 1q43 | 10p12.1|10p12.1-p11.2 | |
Type of gene | protein-coding | protein-coding | |
Description | galectin-8Po66 carbohydrate binding proteingalectin-8glectin, galactoside-binding, soluble, 8po66 carbohydrate-binding proteinprostate carcinoma tumor antigen 1 | WW domain-containing adapter protein with coiled-coil | |
Modification date | 20180519 | 20180519 | |
UniProtAcc | O00214 | Q9BTA9 | |
Ensembl transtripts involved in fusion gene | ENST00000526589, ENST00000527974, ENST00000352231, ENST00000341872, ENST00000450372, ENST00000366584, ENST00000416919, ENST00000323938, ENST00000526634, ENST00000525042, | ENST00000375664, ENST00000375646, ENST00000347934, ENST00000354911, ENST00000428935, ENST00000532233, | |
Fusion gene scores | * DoF score | 5 X 5 X 3=75 | 9 X 11 X 3=297 |
# samples | 7 | 13 | |
** MAII score | log2(7/75*10)=-0.0995356735509144 possibly effective Gene in Pan-Cancer Fusion Genes (peGinPCFGs). DoF>8 and MAII<0 | log2(13/297*10)=-1.19195130777231 possibly effective Gene in Pan-Cancer Fusion Genes (peGinPCFGs). DoF>8 and MAII<0 | |
Context | PubMed: LGALS8 [Title/Abstract] AND WAC [Title/Abstract] AND fusion [Title/Abstract] | ||
Functional or gene categories assigned by FusionGDB annotation |
* DoF score (Degree of Frequency) = # partners X # break points X # cancer types ** MAII score (Major Active Isofusion Index) = log2(# samples/DoF score*10) |
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Partner | Gene | GO ID | GO term | PubMed ID |
Hgene | LGALS8 | GO:1904977 | lymphatic endothelial cell migration | 19268462 |
![]() (ChiTars (NAR, 2018), tumorfusions (NAR, 2018), Gao et al. (Cell, 2018)) * All genome coordinats were lifted-over on hg19. * Click on the break point to see the gene structure around the break point region using the UCSC Genome Browser. |
Data type | Source | Cancer type | Sample | Hgene | Hchr | Hbp | Hstrand | Tgene | Tchr | Tbp | Tstrand |
ChiTaRS3.1 | BE082917 | LGALS8 | chr1 | 236714485 | - | WAC | chr10 | 28897201 | - | ||
ChiTaRS3.1 | BE082698 | LGALS8 | chr1 | 236714485 | - | WAC | chr10 | 28897201 | - |
* LD: Li Ding group's fusion gene list RV: Roel Verhaak group's fusion gene list ChiTaRs fusion database |
![]() * Click on the break point to see the gene structure around the break point region using the UCSC Genome Browser. |
ORF | Henst | Tenst | Hgene | Hchr | Hbp | Hstrand | Tgene | Tchr | Tbp | Tstrand |
3UTR-3CDS | ENST00000526589 | ENST00000375664 | LGALS8 | chr1 | 236714485 | - | WAC | chr10 | 28897201 | - |
3UTR-3CDS | ENST00000526589 | ENST00000375646 | LGALS8 | chr1 | 236714485 | - | WAC | chr10 | 28897201 | - |
3UTR-3CDS | ENST00000526589 | ENST00000347934 | LGALS8 | chr1 | 236714485 | - | WAC | chr10 | 28897201 | - |
3UTR-3CDS | ENST00000526589 | ENST00000354911 | LGALS8 | chr1 | 236714485 | - | WAC | chr10 | 28897201 | - |
3UTR-3CDS | ENST00000526589 | ENST00000428935 | LGALS8 | chr1 | 236714485 | - | WAC | chr10 | 28897201 | - |
3UTR-intron | ENST00000526589 | ENST00000532233 | LGALS8 | chr1 | 236714485 | - | WAC | chr10 | 28897201 | - |
intron-3CDS | ENST00000527974 | ENST00000375664 | LGALS8 | chr1 | 236714485 | - | WAC | chr10 | 28897201 | - |
intron-3CDS | ENST00000527974 | ENST00000375646 | LGALS8 | chr1 | 236714485 | - | WAC | chr10 | 28897201 | - |
intron-3CDS | ENST00000527974 | ENST00000347934 | LGALS8 | chr1 | 236714485 | - | WAC | chr10 | 28897201 | - |
intron-3CDS | ENST00000527974 | ENST00000354911 | LGALS8 | chr1 | 236714485 | - | WAC | chr10 | 28897201 | - |
intron-3CDS | ENST00000527974 | ENST00000428935 | LGALS8 | chr1 | 236714485 | - | WAC | chr10 | 28897201 | - |
intron-intron | ENST00000527974 | ENST00000532233 | LGALS8 | chr1 | 236714485 | - | WAC | chr10 | 28897201 | - |
intron-3CDS | ENST00000352231 | ENST00000375664 | LGALS8 | chr1 | 236714485 | - | WAC | chr10 | 28897201 | - |
intron-3CDS | ENST00000352231 | ENST00000375646 | LGALS8 | chr1 | 236714485 | - | WAC | chr10 | 28897201 | - |
intron-3CDS | ENST00000352231 | ENST00000347934 | LGALS8 | chr1 | 236714485 | - | WAC | chr10 | 28897201 | - |
intron-3CDS | ENST00000352231 | ENST00000354911 | LGALS8 | chr1 | 236714485 | - | WAC | chr10 | 28897201 | - |
intron-3CDS | ENST00000352231 | ENST00000428935 | LGALS8 | chr1 | 236714485 | - | WAC | chr10 | 28897201 | - |
intron-intron | ENST00000352231 | ENST00000532233 | LGALS8 | chr1 | 236714485 | - | WAC | chr10 | 28897201 | - |
intron-3CDS | ENST00000341872 | ENST00000375664 | LGALS8 | chr1 | 236714485 | - | WAC | chr10 | 28897201 | - |
intron-3CDS | ENST00000341872 | ENST00000375646 | LGALS8 | chr1 | 236714485 | - | WAC | chr10 | 28897201 | - |
intron-3CDS | ENST00000341872 | ENST00000347934 | LGALS8 | chr1 | 236714485 | - | WAC | chr10 | 28897201 | - |
intron-3CDS | ENST00000341872 | ENST00000354911 | LGALS8 | chr1 | 236714485 | - | WAC | chr10 | 28897201 | - |
intron-3CDS | ENST00000341872 | ENST00000428935 | LGALS8 | chr1 | 236714485 | - | WAC | chr10 | 28897201 | - |
intron-intron | ENST00000341872 | ENST00000532233 | LGALS8 | chr1 | 236714485 | - | WAC | chr10 | 28897201 | - |
intron-3CDS | ENST00000450372 | ENST00000375664 | LGALS8 | chr1 | 236714485 | - | WAC | chr10 | 28897201 | - |
intron-3CDS | ENST00000450372 | ENST00000375646 | LGALS8 | chr1 | 236714485 | - | WAC | chr10 | 28897201 | - |
intron-3CDS | ENST00000450372 | ENST00000347934 | LGALS8 | chr1 | 236714485 | - | WAC | chr10 | 28897201 | - |
intron-3CDS | ENST00000450372 | ENST00000354911 | LGALS8 | chr1 | 236714485 | - | WAC | chr10 | 28897201 | - |
intron-3CDS | ENST00000450372 | ENST00000428935 | LGALS8 | chr1 | 236714485 | - | WAC | chr10 | 28897201 | - |
intron-intron | ENST00000450372 | ENST00000532233 | LGALS8 | chr1 | 236714485 | - | WAC | chr10 | 28897201 | - |
intron-3CDS | ENST00000366584 | ENST00000375664 | LGALS8 | chr1 | 236714485 | - | WAC | chr10 | 28897201 | - |
intron-3CDS | ENST00000366584 | ENST00000375646 | LGALS8 | chr1 | 236714485 | - | WAC | chr10 | 28897201 | - |
intron-3CDS | ENST00000366584 | ENST00000347934 | LGALS8 | chr1 | 236714485 | - | WAC | chr10 | 28897201 | - |
intron-3CDS | ENST00000366584 | ENST00000354911 | LGALS8 | chr1 | 236714485 | - | WAC | chr10 | 28897201 | - |
intron-3CDS | ENST00000366584 | ENST00000428935 | LGALS8 | chr1 | 236714485 | - | WAC | chr10 | 28897201 | - |
intron-intron | ENST00000366584 | ENST00000532233 | LGALS8 | chr1 | 236714485 | - | WAC | chr10 | 28897201 | - |
intron-3CDS | ENST00000416919 | ENST00000375664 | LGALS8 | chr1 | 236714485 | - | WAC | chr10 | 28897201 | - |
intron-3CDS | ENST00000416919 | ENST00000375646 | LGALS8 | chr1 | 236714485 | - | WAC | chr10 | 28897201 | - |
intron-3CDS | ENST00000416919 | ENST00000347934 | LGALS8 | chr1 | 236714485 | - | WAC | chr10 | 28897201 | - |
intron-3CDS | ENST00000416919 | ENST00000354911 | LGALS8 | chr1 | 236714485 | - | WAC | chr10 | 28897201 | - |
intron-3CDS | ENST00000416919 | ENST00000428935 | LGALS8 | chr1 | 236714485 | - | WAC | chr10 | 28897201 | - |
intron-intron | ENST00000416919 | ENST00000532233 | LGALS8 | chr1 | 236714485 | - | WAC | chr10 | 28897201 | - |
intron-3CDS | ENST00000323938 | ENST00000375664 | LGALS8 | chr1 | 236714485 | - | WAC | chr10 | 28897201 | - |
intron-3CDS | ENST00000323938 | ENST00000375646 | LGALS8 | chr1 | 236714485 | - | WAC | chr10 | 28897201 | - |
intron-3CDS | ENST00000323938 | ENST00000347934 | LGALS8 | chr1 | 236714485 | - | WAC | chr10 | 28897201 | - |
intron-3CDS | ENST00000323938 | ENST00000354911 | LGALS8 | chr1 | 236714485 | - | WAC | chr10 | 28897201 | - |
intron-3CDS | ENST00000323938 | ENST00000428935 | LGALS8 | chr1 | 236714485 | - | WAC | chr10 | 28897201 | - |
intron-intron | ENST00000323938 | ENST00000532233 | LGALS8 | chr1 | 236714485 | - | WAC | chr10 | 28897201 | - |
intron-3CDS | ENST00000526634 | ENST00000375664 | LGALS8 | chr1 | 236714485 | - | WAC | chr10 | 28897201 | - |
intron-3CDS | ENST00000526634 | ENST00000375646 | LGALS8 | chr1 | 236714485 | - | WAC | chr10 | 28897201 | - |
intron-3CDS | ENST00000526634 | ENST00000347934 | LGALS8 | chr1 | 236714485 | - | WAC | chr10 | 28897201 | - |
intron-3CDS | ENST00000526634 | ENST00000354911 | LGALS8 | chr1 | 236714485 | - | WAC | chr10 | 28897201 | - |
intron-3CDS | ENST00000526634 | ENST00000428935 | LGALS8 | chr1 | 236714485 | - | WAC | chr10 | 28897201 | - |
intron-intron | ENST00000526634 | ENST00000532233 | LGALS8 | chr1 | 236714485 | - | WAC | chr10 | 28897201 | - |
intron-3CDS | ENST00000525042 | ENST00000375664 | LGALS8 | chr1 | 236714485 | - | WAC | chr10 | 28897201 | - |
intron-3CDS | ENST00000525042 | ENST00000375646 | LGALS8 | chr1 | 236714485 | - | WAC | chr10 | 28897201 | - |
intron-3CDS | ENST00000525042 | ENST00000347934 | LGALS8 | chr1 | 236714485 | - | WAC | chr10 | 28897201 | - |
intron-3CDS | ENST00000525042 | ENST00000354911 | LGALS8 | chr1 | 236714485 | - | WAC | chr10 | 28897201 | - |
intron-3CDS | ENST00000525042 | ENST00000428935 | LGALS8 | chr1 | 236714485 | - | WAC | chr10 | 28897201 | - |
intron-intron | ENST00000525042 | ENST00000532233 | LGALS8 | chr1 | 236714485 | - | WAC | chr10 | 28897201 | - |
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FusionProtFeatures for LGALS8_WAC |
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Hgene | Tgene |
LGALS8 | WAC |
![]() * Minus value of BPloci means that the break pointn is located before the CDS. |
- In-frame and retained protein feature among the 13 regional features. |
Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Protein feature | Protein feature note |
- In-frame and not-retained protein feature among the 13 regional features. |
Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Protein feature | Protein feature note |
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FusionGeneSequence for LGALS8_WAC |
![]() (nt: nucleotides, aa: amino acids) |
* Fusion amino acid sequences. |
* Fusion transcript sequences (only coding sequence (CDS) region). |
* Fusion transcript sequences (Full-length transcript). |
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FusionGenePPI for LGALS8_WAC |
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Hgene | Hgene's interactors | Tgene | Tgene's interactors |
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Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Still interaction with |
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Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Interaction lost with |
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Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Interaction lost with |
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RelatedDrugs for LGALS8_WAC |
![]() (DrugBank Version 5.1.0 2018-04-02) |
Partner | Gene | UniProtAcc | DrugBank ID | Drug name | Drug activity | Drug type | Drug status |
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RelatedDiseases for LGALS8_WAC |
![]() (DisGeNet 4.0) |
Partner | Gene | Disease ID | Disease name | # pubmeds | Source |