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Center for Computational Systems Medicine
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FusionGeneSummary

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FusionProtFeature

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FusionGeneSequence

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FusionGenePPI

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RelatedDrugs

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RelatedDiseases

Fusion gene ID: 19655

FusionGeneSummary for LGALS8_LGALS8

check button Fusion gene summary
Fusion gene informationFusion gene name: LGALS8_LGALS8
Fusion gene ID: 19655
HgeneTgene
Gene symbol

LGALS8

LGALS8

Gene ID

3964

3964

Gene namegalectin 8galectin 8
SynonymsGal-8|PCTA-1|PCTA1|Po66-CBPGal-8|PCTA-1|PCTA1|Po66-CBP
Cytomap

1q43

1q43

Type of geneprotein-codingprotein-coding
Descriptiongalectin-8Po66 carbohydrate binding proteingalectin-8glectin, galactoside-binding, soluble, 8po66 carbohydrate-binding proteinprostate carcinoma tumor antigen 1galectin-8Po66 carbohydrate binding proteingalectin-8glectin, galactoside-binding, soluble, 8po66 carbohydrate-binding proteinprostate carcinoma tumor antigen 1
Modification date2018051920180519
UniProtAcc

O00214

O00214

Ensembl transtripts involved in fusion geneENST00000526589, ENST00000527974, 
ENST00000352231, ENST00000341872, 
ENST00000450372, ENST00000366584, 
ENST00000416919, ENST00000323938, 
ENST00000526634, ENST00000525042, 
ENST00000526589, ENST00000527974, 
ENST00000352231, ENST00000341872, 
ENST00000450372, ENST00000366584, 
ENST00000416919, ENST00000323938, 
ENST00000526634, ENST00000525042, 
Fusion gene scores* DoF score5 X 5 X 3=752 X 2 X 1=4
# samples 72
** MAII scorelog2(7/75*10)=-0.0995356735509144
possibly effective Gene in Pan-Cancer Fusion Genes (peGinPCFGs).
DoF>8 and MAII<0
log2(2/4*10)=2.32192809488736
Context

PubMed: LGALS8 [Title/Abstract] AND LGALS8 [Title/Abstract] AND fusion [Title/Abstract]

Functional or gene categories assigned by FusionGDB annotation
* DoF score (Degree of Frequency) = # partners X # break points X # cancer types
** MAII score (Major Active Isofusion Index) = log2(# samples/DoF score*10)

check button Gene ontology of each fusion partner gene with evidence of Inferred from Direct Assay (IDA) from Entrez
PartnerGeneGO IDGO termPubMed ID
HgeneLGALS8

GO:1904977

lymphatic endothelial cell migration

19268462

TgeneLGALS8

GO:1904977

lymphatic endothelial cell migration

19268462


check button Fusion gene information from three resources
(ChiTars (NAR, 2018), tumorfusions (NAR, 2018), Gao et al. (Cell, 2018))
* All genome coordinats were lifted-over on hg19.
* Click on the break point to see the gene structure around the break point region using the UCSC Genome Browser.
Data typeSourceCancer typeSampleHgeneHchrHbpHstrandTgeneTchrTbpTstrand
ChiTaRS3.1AW752952LGALS8chr1

236711602

-LGALS8chr1

236712493

-
* LD: Li Ding group's fusion gene list
  RV: Roel Verhaak group's fusion gene list
  ChiTaRs fusion database

check button Open reading frame (ORF) analsis of fusion genes based on Ensembl gene isoform structure.
* Click on the break point to see the gene structure around the break point region using the UCSC Genome Browser.
ORFHenstTenstHgeneHchrHbpHstrandTgeneTchrTbpTstrand
3UTR-3UTRENST00000526589ENST00000526589LGALS8chr1

236711602

-LGALS8chr1

236712493

-
3UTR-intronENST00000526589ENST00000527974LGALS8chr1

236711602

-LGALS8chr1

236712493

-
3UTR-intronENST00000526589ENST00000352231LGALS8chr1

236711602

-LGALS8chr1

236712493

-
3UTR-3UTRENST00000526589ENST00000341872LGALS8chr1

236711602

-LGALS8chr1

236712493

-
3UTR-3UTRENST00000526589ENST00000450372LGALS8chr1

236711602

-LGALS8chr1

236712493

-
3UTR-3UTRENST00000526589ENST00000366584LGALS8chr1

236711602

-LGALS8chr1

236712493

-
3UTR-intronENST00000526589ENST00000416919LGALS8chr1

236711602

-LGALS8chr1

236712493

-
3UTR-intronENST00000526589ENST00000323938LGALS8chr1

236711602

-LGALS8chr1

236712493

-
3UTR-intronENST00000526589ENST00000526634LGALS8chr1

236711602

-LGALS8chr1

236712493

-
3UTR-intronENST00000526589ENST00000525042LGALS8chr1

236711602

-LGALS8chr1

236712493

-
intron-3UTRENST00000527974ENST00000526589LGALS8chr1

236711602

-LGALS8chr1

236712493

-
intron-intronENST00000527974ENST00000527974LGALS8chr1

236711602

-LGALS8chr1

236712493

-
intron-intronENST00000527974ENST00000352231LGALS8chr1

236711602

-LGALS8chr1

236712493

-
intron-3UTRENST00000527974ENST00000341872LGALS8chr1

236711602

-LGALS8chr1

236712493

-
intron-3UTRENST00000527974ENST00000450372LGALS8chr1

236711602

-LGALS8chr1

236712493

-
intron-3UTRENST00000527974ENST00000366584LGALS8chr1

236711602

-LGALS8chr1

236712493

-
intron-intronENST00000527974ENST00000416919LGALS8chr1

236711602

-LGALS8chr1

236712493

-
intron-intronENST00000527974ENST00000323938LGALS8chr1

236711602

-LGALS8chr1

236712493

-
intron-intronENST00000527974ENST00000526634LGALS8chr1

236711602

-LGALS8chr1

236712493

-
intron-intronENST00000527974ENST00000525042LGALS8chr1

236711602

-LGALS8chr1

236712493

-
intron-3UTRENST00000352231ENST00000526589LGALS8chr1

236711602

-LGALS8chr1

236712493

-
intron-intronENST00000352231ENST00000527974LGALS8chr1

236711602

-LGALS8chr1

236712493

-
intron-intronENST00000352231ENST00000352231LGALS8chr1

236711602

-LGALS8chr1

236712493

-
intron-3UTRENST00000352231ENST00000341872LGALS8chr1

236711602

-LGALS8chr1

236712493

-
intron-3UTRENST00000352231ENST00000450372LGALS8chr1

236711602

-LGALS8chr1

236712493

-
intron-3UTRENST00000352231ENST00000366584LGALS8chr1

236711602

-LGALS8chr1

236712493

-
intron-intronENST00000352231ENST00000416919LGALS8chr1

236711602

-LGALS8chr1

236712493

-
intron-intronENST00000352231ENST00000323938LGALS8chr1

236711602

-LGALS8chr1

236712493

-
intron-intronENST00000352231ENST00000526634LGALS8chr1

236711602

-LGALS8chr1

236712493

-
intron-intronENST00000352231ENST00000525042LGALS8chr1

236711602

-LGALS8chr1

236712493

-
3UTR-3UTRENST00000341872ENST00000526589LGALS8chr1

236711602

-LGALS8chr1

236712493

-
3UTR-intronENST00000341872ENST00000527974LGALS8chr1

236711602

-LGALS8chr1

236712493

-
3UTR-intronENST00000341872ENST00000352231LGALS8chr1

236711602

-LGALS8chr1

236712493

-
3UTR-3UTRENST00000341872ENST00000341872LGALS8chr1

236711602

-LGALS8chr1

236712493

-
3UTR-3UTRENST00000341872ENST00000450372LGALS8chr1

236711602

-LGALS8chr1

236712493

-
3UTR-3UTRENST00000341872ENST00000366584LGALS8chr1

236711602

-LGALS8chr1

236712493

-
3UTR-intronENST00000341872ENST00000416919LGALS8chr1

236711602

-LGALS8chr1

236712493

-
3UTR-intronENST00000341872ENST00000323938LGALS8chr1

236711602

-LGALS8chr1

236712493

-
3UTR-intronENST00000341872ENST00000526634LGALS8chr1

236711602

-LGALS8chr1

236712493

-
3UTR-intronENST00000341872ENST00000525042LGALS8chr1

236711602

-LGALS8chr1

236712493

-
3UTR-3UTRENST00000450372ENST00000526589LGALS8chr1

236711602

-LGALS8chr1

236712493

-
3UTR-intronENST00000450372ENST00000527974LGALS8chr1

236711602

-LGALS8chr1

236712493

-
3UTR-intronENST00000450372ENST00000352231LGALS8chr1

236711602

-LGALS8chr1

236712493

-
3UTR-3UTRENST00000450372ENST00000341872LGALS8chr1

236711602

-LGALS8chr1

236712493

-
3UTR-3UTRENST00000450372ENST00000450372LGALS8chr1

236711602

-LGALS8chr1

236712493

-
3UTR-3UTRENST00000450372ENST00000366584LGALS8chr1

236711602

-LGALS8chr1

236712493

-
3UTR-intronENST00000450372ENST00000416919LGALS8chr1

236711602

-LGALS8chr1

236712493

-
3UTR-intronENST00000450372ENST00000323938LGALS8chr1

236711602

-LGALS8chr1

236712493

-
3UTR-intronENST00000450372ENST00000526634LGALS8chr1

236711602

-LGALS8chr1

236712493

-
3UTR-intronENST00000450372ENST00000525042LGALS8chr1

236711602

-LGALS8chr1

236712493

-
3UTR-3UTRENST00000366584ENST00000526589LGALS8chr1

236711602

-LGALS8chr1

236712493

-
3UTR-intronENST00000366584ENST00000527974LGALS8chr1

236711602

-LGALS8chr1

236712493

-
3UTR-intronENST00000366584ENST00000352231LGALS8chr1

236711602

-LGALS8chr1

236712493

-
3UTR-3UTRENST00000366584ENST00000341872LGALS8chr1

236711602

-LGALS8chr1

236712493

-
3UTR-3UTRENST00000366584ENST00000450372LGALS8chr1

236711602

-LGALS8chr1

236712493

-
3UTR-3UTRENST00000366584ENST00000366584LGALS8chr1

236711602

-LGALS8chr1

236712493

-
3UTR-intronENST00000366584ENST00000416919LGALS8chr1

236711602

-LGALS8chr1

236712493

-
3UTR-intronENST00000366584ENST00000323938LGALS8chr1

236711602

-LGALS8chr1

236712493

-
3UTR-intronENST00000366584ENST00000526634LGALS8chr1

236711602

-LGALS8chr1

236712493

-
3UTR-intronENST00000366584ENST00000525042LGALS8chr1

236711602

-LGALS8chr1

236712493

-
intron-3UTRENST00000416919ENST00000526589LGALS8chr1

236711602

-LGALS8chr1

236712493

-
intron-intronENST00000416919ENST00000527974LGALS8chr1

236711602

-LGALS8chr1

236712493

-
intron-intronENST00000416919ENST00000352231LGALS8chr1

236711602

-LGALS8chr1

236712493

-
intron-3UTRENST00000416919ENST00000341872LGALS8chr1

236711602

-LGALS8chr1

236712493

-
intron-3UTRENST00000416919ENST00000450372LGALS8chr1

236711602

-LGALS8chr1

236712493

-
intron-3UTRENST00000416919ENST00000366584LGALS8chr1

236711602

-LGALS8chr1

236712493

-
intron-intronENST00000416919ENST00000416919LGALS8chr1

236711602

-LGALS8chr1

236712493

-
intron-intronENST00000416919ENST00000323938LGALS8chr1

236711602

-LGALS8chr1

236712493

-
intron-intronENST00000416919ENST00000526634LGALS8chr1

236711602

-LGALS8chr1

236712493

-
intron-intronENST00000416919ENST00000525042LGALS8chr1

236711602

-LGALS8chr1

236712493

-
3UTR-3UTRENST00000323938ENST00000526589LGALS8chr1

236711602

-LGALS8chr1

236712493

-
3UTR-intronENST00000323938ENST00000527974LGALS8chr1

236711602

-LGALS8chr1

236712493

-
3UTR-intronENST00000323938ENST00000352231LGALS8chr1

236711602

-LGALS8chr1

236712493

-
3UTR-3UTRENST00000323938ENST00000341872LGALS8chr1

236711602

-LGALS8chr1

236712493

-
3UTR-3UTRENST00000323938ENST00000450372LGALS8chr1

236711602

-LGALS8chr1

236712493

-
3UTR-3UTRENST00000323938ENST00000366584LGALS8chr1

236711602

-LGALS8chr1

236712493

-
3UTR-intronENST00000323938ENST00000416919LGALS8chr1

236711602

-LGALS8chr1

236712493

-
3UTR-intronENST00000323938ENST00000323938LGALS8chr1

236711602

-LGALS8chr1

236712493

-
3UTR-intronENST00000323938ENST00000526634LGALS8chr1

236711602

-LGALS8chr1

236712493

-
3UTR-intronENST00000323938ENST00000525042LGALS8chr1

236711602

-LGALS8chr1

236712493

-
3UTR-3UTRENST00000526634ENST00000526589LGALS8chr1

236711602

-LGALS8chr1

236712493

-
3UTR-intronENST00000526634ENST00000527974LGALS8chr1

236711602

-LGALS8chr1

236712493

-
3UTR-intronENST00000526634ENST00000352231LGALS8chr1

236711602

-LGALS8chr1

236712493

-
3UTR-3UTRENST00000526634ENST00000341872LGALS8chr1

236711602

-LGALS8chr1

236712493

-
3UTR-3UTRENST00000526634ENST00000450372LGALS8chr1

236711602

-LGALS8chr1

236712493

-
3UTR-3UTRENST00000526634ENST00000366584LGALS8chr1

236711602

-LGALS8chr1

236712493

-
3UTR-intronENST00000526634ENST00000416919LGALS8chr1

236711602

-LGALS8chr1

236712493

-
3UTR-intronENST00000526634ENST00000323938LGALS8chr1

236711602

-LGALS8chr1

236712493

-
3UTR-intronENST00000526634ENST00000526634LGALS8chr1

236711602

-LGALS8chr1

236712493

-
3UTR-intronENST00000526634ENST00000525042LGALS8chr1

236711602

-LGALS8chr1

236712493

-
intron-3UTRENST00000525042ENST00000526589LGALS8chr1

236711602

-LGALS8chr1

236712493

-
intron-intronENST00000525042ENST00000527974LGALS8chr1

236711602

-LGALS8chr1

236712493

-
intron-intronENST00000525042ENST00000352231LGALS8chr1

236711602

-LGALS8chr1

236712493

-
intron-3UTRENST00000525042ENST00000341872LGALS8chr1

236711602

-LGALS8chr1

236712493

-
intron-3UTRENST00000525042ENST00000450372LGALS8chr1

236711602

-LGALS8chr1

236712493

-
intron-3UTRENST00000525042ENST00000366584LGALS8chr1

236711602

-LGALS8chr1

236712493

-
intron-intronENST00000525042ENST00000416919LGALS8chr1

236711602

-LGALS8chr1

236712493

-
intron-intronENST00000525042ENST00000323938LGALS8chr1

236711602

-LGALS8chr1

236712493

-
intron-intronENST00000525042ENST00000526634LGALS8chr1

236711602

-LGALS8chr1

236712493

-
intron-intronENST00000525042ENST00000525042LGALS8chr1

236711602

-LGALS8chr1

236712493

-

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FusionProtFeatures for LGALS8_LGALS8


check buttonMain function of each fusion partner protein. (from UniProt)
HgeneTgene
LGALS8

O00214

LGALS8

O00214


check buttonRetention analysis result of each fusion partner protein across 39 protein features of UniProt such as six molecule processing features, 13 region features, four site features, six amino acid modification features, two natural variation features, five experimental info features, and 3 secondary structure features. Here, because of limited space for viewing, we only show the protein feature retention information belong to the 13 regional features. All retention annotation result can be downloaded at

download page

.

* Minus value of BPloci means that the break pointn is located before the CDS.
- In-frame and retained protein feature among the 13 regional features.
PartnerGeneHbpTbpENSTStrandBPexonTotalExonProtein feature loci*BPlociTotalLenProtein featureProtein feature note

- In-frame and not-retained protein feature among the 13 regional features.
PartnerGeneHbpTbpENSTStrandBPexonTotalExonProtein feature loci*BPlociTotalLenProtein featureProtein feature note


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FusionGeneSequence for LGALS8_LGALS8


check button For in-frame fusion transcripts, we provide the fusion transcript sequences and fusion amino acid sequences.
(nt: nucleotides, aa: amino acids)

* Fusion amino acid sequences.

* Fusion transcript sequences (only coding sequence (CDS) region).

* Fusion transcript sequences (Full-length transcript).

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FusionGenePPI for LGALS8_LGALS8


check button Go to ChiPPI (Chimeric Protein-Protein interactions) to see the chimeric PPI interaction in

ChiPPI page

.

check button Protein-protein interactors with each fusion partner protein in wild-type (BIOGRID-3.4.160)
HgeneHgene's interactorsTgeneTgene's interactors


check button - Retained PPIs in in-frame fusion.
PartnerGeneHbpTbpENSTStrandBPexonTotalExonProtein feature loci*BPlociTotalLenStill interaction with


check button - Lost PPIs in in-frame fusion.
PartnerGeneHbpTbpENSTStrandBPexonTotalExonProtein feature loci*BPlociTotalLenInteraction lost with


check button - Retained PPIs, but lost function due to frame-shift fusion.
PartnerGeneHbpTbpENSTStrandBPexonTotalExonProtein feature loci*BPlociTotalLenInteraction lost with


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RelatedDrugs for LGALS8_LGALS8


check button Drugs targeting genes involved in this fusion gene.
(DrugBank Version 5.1.0 2018-04-02)
PartnerGeneUniProtAccDrugBank IDDrug nameDrug activityDrug typeDrug status

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RelatedDiseases for LGALS8_LGALS8


check button Diseases associated with fusion partners.
(DisGeNet 4.0)
PartnerGeneDisease IDDisease name# pubmedsSource