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Fusion gene ID: 19629 |
FusionGeneSummary for LEPROT_SGIP1 |
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Fusion gene information | Fusion gene name: LEPROT_SGIP1 | Fusion gene ID: 19629 | Hgene | Tgene | Gene symbol | LEPROT | SGIP1 | Gene ID | 54741 | 84251 |
Gene name | leptin receptor overlapping transcript | SH3 domain GRB2 like endophilin interacting protein 1 | |
Synonyms | LEPR|OB-RGRP|OBRGRP|VPS55 | - | |
Cytomap | 1p31.3 | 1p31.3 | |
Type of gene | protein-coding | protein-coding | |
Description | leptin receptor gene-related proteinDnaJ (Hsp40) homolog, subfamily C, member 6OB-R gene-related proteinendospaninendospanin-1leptin receptor overlapping transcript protein | SH3-containing GRB2-like protein 3-interacting protein 1endophilin-3-interacting protein | |
Modification date | 20180523 | 20180523 | |
UniProtAcc | O15243 | Q9BQI5 | |
Ensembl transtripts involved in fusion gene | ENST00000371065, ENST00000484243, | ENST00000237247, ENST00000371039, ENST00000371035, ENST00000468286, ENST00000371036, ENST00000371037, ENST00000435165, | |
Fusion gene scores | * DoF score | 5 X 5 X 3=75 | 5 X 5 X 3=75 |
# samples | 6 | 6 | |
** MAII score | log2(6/75*10)=-0.321928094887362 possibly effective Gene in Pan-Cancer Fusion Genes (peGinPCFGs). DoF>8 and MAII<0 | log2(6/75*10)=-0.321928094887362 possibly effective Gene in Pan-Cancer Fusion Genes (peGinPCFGs). DoF>8 and MAII<0 | |
Context | PubMed: LEPROT [Title/Abstract] AND SGIP1 [Title/Abstract] AND fusion [Title/Abstract] | ||
Functional or gene categories assigned by FusionGDB annotation |
* DoF score (Degree of Frequency) = # partners X # break points X # cancer types ** MAII score (Major Active Isofusion Index) = log2(# samples/DoF score*10) |
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Partner | Gene | GO ID | GO term | PubMed ID |
Hgene | LEPROT | GO:0046426 | negative regulation of JAK-STAT cascade | 18042720 |
Hgene | LEPROT | GO:0060400 | negative regulation of growth hormone receptor signaling pathway | 19907080 |
Hgene | LEPROT | GO:2000009 | negative regulation of protein localization to cell surface | 18042720 |
![]() (ChiTars (NAR, 2018), tumorfusions (NAR, 2018), Gao et al. (Cell, 2018)) * All genome coordinats were lifted-over on hg19. * Click on the break point to see the gene structure around the break point region using the UCSC Genome Browser. |
Data type | Source | Cancer type | Sample | Hgene | Hchr | Hbp | Hstrand | Tgene | Tchr | Tbp | Tstrand |
TCGA | LD | PRAD | TCGA-HC-7737-01A | LEPROT | chr1 | 65886423 | + | SGIP1 | chr1 | 67184977 | + |
* LD: Li Ding group's fusion gene list RV: Roel Verhaak group's fusion gene list ChiTaRs fusion database |
![]() * Click on the break point to see the gene structure around the break point region using the UCSC Genome Browser. |
ORF | Henst | Tenst | Hgene | Hchr | Hbp | Hstrand | Tgene | Tchr | Tbp | Tstrand |
In-frame | ENST00000371065 | ENST00000237247 | LEPROT | chr1 | 65886423 | + | SGIP1 | chr1 | 67184977 | + |
In-frame | ENST00000371065 | ENST00000371039 | LEPROT | chr1 | 65886423 | + | SGIP1 | chr1 | 67184977 | + |
In-frame | ENST00000371065 | ENST00000371035 | LEPROT | chr1 | 65886423 | + | SGIP1 | chr1 | 67184977 | + |
5CDS-intron | ENST00000371065 | ENST00000468286 | LEPROT | chr1 | 65886423 | + | SGIP1 | chr1 | 67184977 | + |
5CDS-intron | ENST00000371065 | ENST00000371036 | LEPROT | chr1 | 65886423 | + | SGIP1 | chr1 | 67184977 | + |
5CDS-intron | ENST00000371065 | ENST00000371037 | LEPROT | chr1 | 65886423 | + | SGIP1 | chr1 | 67184977 | + |
5CDS-intron | ENST00000371065 | ENST00000435165 | LEPROT | chr1 | 65886423 | + | SGIP1 | chr1 | 67184977 | + |
3UTR-3CDS | ENST00000484243 | ENST00000237247 | LEPROT | chr1 | 65886423 | + | SGIP1 | chr1 | 67184977 | + |
3UTR-3CDS | ENST00000484243 | ENST00000371039 | LEPROT | chr1 | 65886423 | + | SGIP1 | chr1 | 67184977 | + |
3UTR-3CDS | ENST00000484243 | ENST00000371035 | LEPROT | chr1 | 65886423 | + | SGIP1 | chr1 | 67184977 | + |
3UTR-intron | ENST00000484243 | ENST00000468286 | LEPROT | chr1 | 65886423 | + | SGIP1 | chr1 | 67184977 | + |
3UTR-intron | ENST00000484243 | ENST00000371036 | LEPROT | chr1 | 65886423 | + | SGIP1 | chr1 | 67184977 | + |
3UTR-intron | ENST00000484243 | ENST00000371037 | LEPROT | chr1 | 65886423 | + | SGIP1 | chr1 | 67184977 | + |
3UTR-intron | ENST00000484243 | ENST00000435165 | LEPROT | chr1 | 65886423 | + | SGIP1 | chr1 | 67184977 | + |
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FusionProtFeatures for LEPROT_SGIP1 |
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Hgene | Tgene |
LEPROT | SGIP1 |
Negatively regulates leptin receptor (LEPR) cell surfaceexpression, and thus decreases response to leptin. Negativelyregulates growth hormone (GH) receptor cell surface expression inliver. May play a role in liver resistance to GH during periods ofreduced nutrient availability. {ECO:0000269|PubMed:18042720,ECO:0000269|PubMed:19907080}. |
![]() * Minus value of BPloci means that the break pointn is located before the CDS. |
- In-frame and retained protein feature among the 13 regional features. |
Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Protein feature | Protein feature note |
Tgene | >SGIP1 | chr1:65886423 | chr1:67184977 | ENST00000371037 | + | 17 | 25 | 559_827 | 543 | 829 | Domain | MHD |
Tgene | >SGIP1 | chr1:65886423 | chr1:67184977 | ENST00000371039 | + | 14 | 22 | 559_827 | 346 | 632 | Domain | MHD |
- In-frame and not-retained protein feature among the 13 regional features. |
Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Protein feature | Protein feature note |
Hgene | >LEPROT | chr1:65886423 | chr1:67184977 | ENST00000371065 | + | 1 | 4 | 100_120 | 5 | 132 | Transmembrane | Helical |
Hgene | >LEPROT | chr1:65886423 | chr1:67184977 | ENST00000371065 | + | 1 | 4 | 32_52 | 5 | 132 | Transmembrane | Helical |
Hgene | >LEPROT | chr1:65886423 | chr1:67184977 | ENST00000371065 | + | 1 | 4 | 69_89 | 5 | 132 | Transmembrane | Helical |
Hgene | >LEPROT | chr1:65886423 | chr1:67184977 | ENST00000371065 | + | 1 | 4 | 7_27 | 5 | 132 | Transmembrane | Helical |
Tgene | SGIP1 | chr1:65886423 | chr1:67184977 | ENST00000237247 | + | 19 | 27 | 106_112 | 574 | 860 | Compositional bias | Poly-Glu |
Tgene | SGIP1 | chr1:65886423 | chr1:67184977 | ENST00000237247 | + | 19 | 27 | 176_499 | 574 | 860 | Compositional bias | Pro-rich |
Tgene | SGIP1 | chr1:65886423 | chr1:67184977 | ENST00000371037 | + | 17 | 25 | 106_112 | 543 | 829 | Compositional bias | Poly-Glu |
Tgene | SGIP1 | chr1:65886423 | chr1:67184977 | ENST00000371037 | + | 17 | 25 | 176_499 | 543 | 829 | Compositional bias | Pro-rich |
Tgene | SGIP1 | chr1:65886423 | chr1:67184977 | ENST00000371039 | + | 14 | 22 | 106_112 | 346 | 632 | Compositional bias | Poly-Glu |
Tgene | SGIP1 | chr1:65886423 | chr1:67184977 | ENST00000371039 | + | 14 | 22 | 176_499 | 346 | 632 | Compositional bias | Pro-rich |
Tgene | SGIP1 | chr1:65886423 | chr1:67184977 | ENST00000237247 | + | 19 | 27 | 559_827 | 574 | 860 | Domain | MHD |
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FusionGeneSequence for LEPROT_SGIP1 |
![]() (nt: nucleotides, aa: amino acids) |
* Fusion amino acid sequences. |
>In-frame_LEPROT_ENST00000371065_chr1_65886423_+_SGIP1_ENST00000237247_chr1_67184977_+_291aa MAGVKGSSRGPSPLTMGAQDTLPVAAAFTETVNAYFKGADPSKCIVKITGEMVLSFPAGITRHFANNPSPAALTFRVINFSRLEHVLPNP QLLCCDNTQNDANTKEFWVNMPNLMTHLKKVSEQKPQATYYNVDMLKYQVSAQGIQSTPLNLAVNWRCEPSSTDLRIDYKYNTDAMTTAV ALNNVQFLVPIDGGVTKLQAVLPPAVWNAEQQRILWKIPDISQKSENGGVGSLLARFQLSEGPSKPSPLVVQFTSEGSTLSGCDIELVGA >In-frame_LEPROT_ENST00000371065_chr1_65886423_+_SGIP1_ENST00000371039_chr1_67184977_+_291aa MAGVKGSSRGPSPLTMGAQDTLPVAAAFTETVNAYFKGADPSKCIVKITGEMVLSFPAGITRHFANNPSPAALTFRVINFSRLEHVLPNP QLLCCDNTQNDANTKEFWVNMPNLMTHLKKVSEQKPQATYYNVDMLKYQVSAQGIQSTPLNLAVNWRCEPSSTDLRIDYKYNTDAMTTAV ALNNVQFLVPIDGGVTKLQAVLPPAVWNAEQQRILWKIPDISQKSENGGVGSLLARFQLSEGPSKPSPLVVQFTSEGSTLSGCDIELVGA >In-frame_LEPROT_ENST00000371065_chr1_65886423_+_SGIP1_ENST00000371035_chr1_67184977_+_291aa MAGVKGSSRGPSPLTMGAQDTLPVAAAFTETVNAYFKGADPSKCIVKITGEMVLSFPAGITRHFANNPSPAALTFRVINFSRLEHVLPNP QLLCCDNTQNDANTKEFWVNMPNLMTHLKKVSEQKPQATYYNVDMLKYQVSAQGIQSTPLNLAVNWRCEPSSTDLRIDYKYNTDAMTTAV ALNNVQFLVPIDGGVTKLQAVLPPAVWNAEQQRILWKIPDISQKSENGGVGSLLARFQLSEGPSKPSPLVVQFTSEGSTLSGCDIELVGA |
* Fusion transcript sequences (only coding sequence (CDS) region). |
>In-frame_LEPROT_ENST00000371065_chr1_65886423_+_SGIP1_ENST00000237247_chr1_67184977_+_873nt ATGGCGGGCGTTAAAGGTTCTTCCAGGGGACCCAGCCCCCTAACCATGGGAGCTCAGGACACTCTCCCTGTTGCAGCAGCATTTACAGAA ACAGTCAATGCCTATTTCAAAGGAGCAGACCCAAGCAAATGTATCGTTAAGATTACCGGAGAAATGGTGTTGTCATTTCCTGCTGGCATC ACCAGACACTTTGCCAACAACCCGTCCCCAGCTGCTCTGACTTTTCGGGTGATAAATTTCAGCAGGTTAGAACACGTCCTGCCAAACCCC CAACTTCTCTGCTGTGATAATACACAAAATGATGCCAATACCAAGGAATTCTGGGTAAACATGCCAAATTTGATGACTCACCTAAAGAAA GTGTCTGAACAAAAACCCCAGGCTACATATTATAACGTTGACATGCTCAAATATCAGGTGTCTGCCCAGGGCATTCAGTCCACACCTCTG AACCTGGCAGTGAATTGGCGATGTGAGCCTTCAAGCACTGACCTGCGCATAGATTACAAATATAATACAGATGCAATGACGACTGCTGTG GCCCTCAACAATGTGCAGTTCCTGGTCCCCATCGACGGAGGAGTCACCAAGCTCCAGGCAGTGCTCCCACCAGCAGTCTGGAATGCTGAA CAACAGAGAATATTGTGGAAGATTCCTGATATCTCTCAGAAGTCAGAAAATGGAGGGGTGGGTTCTTTGTTGGCAAGATTTCAGTTATCT GAAGGCCCAAGCAAACCTTCTCCATTGGTTGTGCAGTTCACAAGTGAAGGAAGCACCCTTTCTGGCTGTGACATTGAACTTGTTGGAGCA >In-frame_LEPROT_ENST00000371065_chr1_65886423_+_SGIP1_ENST00000371039_chr1_67184977_+_873nt ATGGCGGGCGTTAAAGGTTCTTCCAGGGGACCCAGCCCCCTAACCATGGGAGCTCAGGACACTCTCCCTGTTGCAGCAGCATTTACAGAA ACAGTCAATGCCTATTTCAAAGGAGCAGACCCAAGCAAATGTATCGTTAAGATTACCGGAGAAATGGTGTTGTCATTTCCTGCTGGCATC ACCAGACACTTTGCCAACAACCCGTCCCCAGCTGCTCTGACTTTTCGGGTGATAAATTTCAGCAGGTTAGAACACGTCCTGCCAAACCCC CAACTTCTCTGCTGTGATAATACACAAAATGATGCCAATACCAAGGAATTCTGGGTAAACATGCCAAATTTGATGACTCACCTAAAGAAA GTGTCTGAACAAAAACCCCAGGCTACATATTATAACGTTGACATGCTCAAATATCAGGTGTCTGCCCAGGGCATTCAGTCCACACCTCTG AACCTGGCAGTGAATTGGCGATGTGAGCCTTCAAGCACTGACCTGCGCATAGATTACAAATATAATACAGATGCAATGACGACTGCTGTG GCCCTCAACAATGTGCAGTTCCTGGTCCCCATCGACGGAGGAGTCACCAAGCTCCAGGCAGTGCTCCCACCAGCAGTCTGGAATGCTGAA CAACAGAGAATATTGTGGAAGATTCCTGATATCTCTCAGAAGTCAGAAAATGGAGGGGTGGGTTCTTTGTTGGCAAGATTTCAGTTATCT GAAGGCCCAAGCAAACCTTCTCCATTGGTTGTGCAGTTCACAAGTGAAGGAAGCACCCTTTCTGGCTGTGACATTGAACTTGTTGGAGCA >In-frame_LEPROT_ENST00000371065_chr1_65886423_+_SGIP1_ENST00000371035_chr1_67184977_+_873nt ATGGCGGGCGTTAAAGGTTCTTCCAGGGGACCCAGCCCCCTAACCATGGGAGCTCAGGACACTCTCCCTGTTGCAGCAGCATTTACAGAA ACAGTCAATGCCTATTTCAAAGGAGCAGACCCAAGCAAATGTATCGTTAAGATTACCGGAGAAATGGTGTTGTCATTTCCTGCTGGCATC ACCAGACACTTTGCCAACAACCCGTCCCCAGCTGCTCTGACTTTTCGGGTGATAAATTTCAGCAGGTTAGAACACGTCCTGCCAAACCCC CAACTTCTCTGCTGTGATAATACACAAAATGATGCCAATACCAAGGAATTCTGGGTAAACATGCCAAATTTGATGACTCACCTAAAGAAA GTGTCTGAACAAAAACCCCAGGCTACATATTATAACGTTGACATGCTCAAATATCAGGTGTCTGCCCAGGGCATTCAGTCCACACCTCTG AACCTGGCAGTGAATTGGCGATGTGAGCCTTCAAGCACTGACCTGCGCATAGATTACAAATATAATACAGATGCAATGACGACTGCTGTG GCCCTCAACAATGTGCAGTTCCTGGTCCCCATCGACGGAGGAGTCACCAAGCTCCAGGCAGTGCTCCCACCAGCAGTCTGGAATGCTGAA CAACAGAGAATATTGTGGAAGATTCCTGATATCTCTCAGAAGTCAGAAAATGGAGGGGTGGGTTCTTTGTTGGCAAGATTTCAGTTATCT GAAGGCCCAAGCAAACCTTCTCCATTGGTTGTGCAGTTCACAAGTGAAGGAAGCACCCTTTCTGGCTGTGACATTGAACTTGTTGGAGCA |
* Fusion transcript sequences (Full-length transcript). |
>In-frame_LEPROT_ENST00000371065_chr1_65886423_+_SGIP1_ENST00000237247_chr1_67184977_+_2290nt GTTCTGCACCGGCGGGGGCGGGGCTCTGCGTGGCCGGGGCGGGCTCGGGATCCGCGGGGCGACTCCCGGTCTGGCTTGGGCAGGCTGCCC GGGCCGTGGCAGGAAGCCGGAAGCAGCCGCGGCCCCAGTTCGGGAGACATGGCGGGCGTTAAAGGTTCTTCCAGGGGACCCAGCCCCCTA ACCATGGGAGCTCAGGACACTCTCCCTGTTGCAGCAGCATTTACAGAAACAGTCAATGCCTATTTCAAAGGAGCAGACCCAAGCAAATGT ATCGTTAAGATTACCGGAGAAATGGTGTTGTCATTTCCTGCTGGCATCACCAGACACTTTGCCAACAACCCGTCCCCAGCTGCTCTGACT TTTCGGGTGATAAATTTCAGCAGGTTAGAACACGTCCTGCCAAACCCCCAACTTCTCTGCTGTGATAATACACAAAATGATGCCAATACC AAGGAATTCTGGGTAAACATGCCAAATTTGATGACTCACCTAAAGAAAGTGTCTGAACAAAAACCCCAGGCTACATATTATAACGTTGAC ATGCTCAAATATCAGGTGTCTGCCCAGGGCATTCAGTCCACACCTCTGAACCTGGCAGTGAATTGGCGATGTGAGCCTTCAAGCACTGAC CTGCGCATAGATTACAAATATAATACAGATGCAATGACGACTGCTGTGGCCCTCAACAATGTGCAGTTCCTGGTCCCCATCGACGGAGGA GTCACCAAGCTCCAGGCAGTGCTCCCACCAGCAGTCTGGAATGCTGAACAACAGAGAATATTGTGGAAGATTCCTGATATCTCTCAGAAG TCAGAAAATGGAGGGGTGGGTTCTTTGTTGGCAAGATTTCAGTTATCTGAAGGCCCAAGCAAACCTTCTCCATTGGTTGTGCAGTTCACA AGTGAAGGAAGCACCCTTTCTGGCTGTGACATTGAACTTGTTGGAGCAGGGTATCGATTTTCACTCATCAAGAAAAGGTTTGCTGCAGGA AAATACTTGGCAGATAACTAATGAAATCTTATGCAAGGATTTGGAGGATTCATATAATGGAGAACTGATGTATGAGAAACAGATTTTAAT TTTGGTTTGATGAAAACAAACCAATATCTGCACTTGGGATATATCAGGTGGAAAGTCAATGACTTTCATCTGTGATTTCCCTCACACACT ACCATGATGACCAGTCCTACAGTATTTACTTCTAGGTGTAATATTGTTAATGGTTTTAAAATGTAATTATTGTATTTGTAAATTGTACTC TCATTCCAGTAAGGCAGTTAGACACTTGAGTTTTAGCATTTTACCATTCCTGAAATGGATGTAATTTAAACTGTGGTATGTAAATTTAAT AGTAGTATTGTTGAATGGCACAATGCTTACAGAGGTAGATTGCATTTTGTCAATATATAAAATTTAAATATAATATTGATAGCTGTCATA AAGGGGGTGCCACATATTAAAGAAACTTAAGTGGAACCAGAAGAAAAAGAAACAAACTTACTTTTCTTCAATGCTTAGTATGTTTTACTC TAGTGCTAAATAAAAACTCTATCTTCAAATGTTTAGTGGGTTAAATTGAGAAACTATTTCAGAAAAAAATTCTAAGGTTACAGCATATTC AAAGAAAAGCATTAGTTACCACTTTTTAAAAAGCTTTTTTTTCAAACTGCAAATTTCATAAAAATGCAAACTGTGTAAACAGGGCCTCTT ATTTTTATAACTTGTGTAAAAAGGGAAAGCAATTCATATTTAAAGTTTAAGTATATTAAATTATAATCAAGAGTAAAGAAGATGTTGAAG TCTTAACTACTTGCCCCTCTCTACAGTTTCGCAAATGTGGGGATTGCTGAATAATCAGTCAGACTAAAACCAAAATTGTGATTTTAAGAT TTCAAGACTTTCCGTAGTTGAACTGGTTAAGAATTTTTGCTTAGTTACTCTGAATAGATGATCTTACTCATCCAGTATGGGGGAATGATA CCTCACGTCTTCCTCTTTACCCACAGGAATCAAAACGCTGAGACTGAGAATTTTAGGGAAAAAAAAGTCCACTGTTTAGATCCAGAAGGA GAGTTTTAATCATTGTTTATATCATTTGAGAATGAAAAAATAAGCTTCATAAATGAAATTCTATTCACATTACTGTGTAATAAATTTCCT TTTGGATGATTAGGATTCATTGTATAAAACTGTAAATCTTTGCCATTCTTGGAGAAGCAAAAGGAGAGTTATCAAAAATGTATGTCGTTT >In-frame_LEPROT_ENST00000371065_chr1_65886423_+_SGIP1_ENST00000371039_chr1_67184977_+_3001nt GTTCTGCACCGGCGGGGGCGGGGCTCTGCGTGGCCGGGGCGGGCTCGGGATCCGCGGGGCGACTCCCGGTCTGGCTTGGGCAGGCTGCCC GGGCCGTGGCAGGAAGCCGGAAGCAGCCGCGGCCCCAGTTCGGGAGACATGGCGGGCGTTAAAGGTTCTTCCAGGGGACCCAGCCCCCTA ACCATGGGAGCTCAGGACACTCTCCCTGTTGCAGCAGCATTTACAGAAACAGTCAATGCCTATTTCAAAGGAGCAGACCCAAGCAAATGT ATCGTTAAGATTACCGGAGAAATGGTGTTGTCATTTCCTGCTGGCATCACCAGACACTTTGCCAACAACCCGTCCCCAGCTGCTCTGACT TTTCGGGTGATAAATTTCAGCAGGTTAGAACACGTCCTGCCAAACCCCCAACTTCTCTGCTGTGATAATACACAAAATGATGCCAATACC AAGGAATTCTGGGTAAACATGCCAAATTTGATGACTCACCTAAAGAAAGTGTCTGAACAAAAACCCCAGGCTACATATTATAACGTTGAC ATGCTCAAATATCAGGTGTCTGCCCAGGGCATTCAGTCCACACCTCTGAACCTGGCAGTGAATTGGCGATGTGAGCCTTCAAGCACTGAC CTGCGCATAGATTACAAATATAATACAGATGCAATGACGACTGCTGTGGCCCTCAACAATGTGCAGTTCCTGGTCCCCATCGACGGAGGA GTCACCAAGCTCCAGGCAGTGCTCCCACCAGCAGTCTGGAATGCTGAACAACAGAGAATATTGTGGAAGATTCCTGATATCTCTCAGAAG TCAGAAAATGGAGGGGTGGGTTCTTTGTTGGCAAGATTTCAGTTATCTGAAGGCCCAAGCAAACCTTCTCCATTGGTTGTGCAGTTCACA AGTGAAGGAAGCACCCTTTCTGGCTGTGACATTGAACTTGTTGGAGCAGGGTATCGATTTTCACTCATCAAGAAAAGGTTTGCTGCAGGA AAATACTTGGCAGATAACTAATGAAATCTTATGCAAGGATTTGGAGGATTCATATAATGGAGAACTGATGTATGAGAAACAGATTTTAAT TTTGGTTTGATGAAAACAAACCAATATCTGCACTTGGGATATATCAGGTGGAAAGTCAATGACTTTCATCTGTGATTTCCCTCACACACT ACCATGATGACCAGTCCTACAGTATTTACTTCTAGGTGTAATATTGTTAATGGTTTTAAAATGTAATTATTGTATTTGTAAATTGTACTC TCATTCCAGTAAGGCAGTTAGACACTTGAGTTTTAGCATTTTACCATTCCTGAAATGGATGTAATTTAAACTGTGGTATGTAAATTTAAT AGTAGTATTGTTGAATGGCACAATGCTTACAGAGGTAGATTGCATTTTGTCAATATATAAAATTTAAATATAATATTGATAGCTGTCATA AAGGGGGTGCCACATATTAAAGAAACTTAAGTGGAACCAGAAGAAAAAGAAACAAACTTACTTTTCTTCAATGCTTAGTATGTTTTACTC TAGTGCTAAATAAAAACTCTATCTTCAAATGTTTAGTGGGTTAAATTGAGAAACTATTTCAGAAAAAAATTCTAAGGTTACAGCATATTC AAAGAAAAGCATTAGTTACCACTTTTTAAAAAGCTTTTTTTTCAAACTGCAAATTTCATAAAAATGCAAACTGTGTAAACAGGGCCTCTT ATTTTTATAACTTGTGTAAAAAGGGAAAGCAATTCATATTTAAAGTTTAAGTATATTAAATTATAATCAAGAGTAAAGAAGATGTTGAAG TCTTAACTACTTGCCCCTCTCTACAGTTTCGCAAATGTGGGGATTGCTGAATAATCAGTCAGACTAAAACCAAAATTGTGATTTTAAGAT TTCAAGACTTTCCGTAGTTGAACTGGTTAAGAATTTTTGCTTAGTTACTCTGAATAGATGATCTTACTCATCCAGTATGGGGGAATGATA CCTCACGTCTTCCTCTTTACCCACAGGAATCAAAACGCTGAGACTGAGAATTTTAGGGAAAAAAAAGTCCACTGTTTAGATCCAGAAGGA GAGTTTTAATCATTGTTTATATCATTTGAGAATGAAAAAATAAGCTTCATAAATGAAATTCTATTCACATTACTGTGTAATAAATTTCCT TTTGGATGATTAGGATTCATTGTATAAAACTGTAAATCTTTGCCATTCTTGGAGAAGCAAAAGGAGAGTTATCAAAAATGTATGTCGTTT CATCGTTGCAAGGTATAATAAAAACTGTAATTATTCAATCTGGCCCTGCCATATGAACATTTAGAAAGACAAACTTCTTCGGGAGTCTCA GTTGTAAAACCTTCCCTCATTAATATCTGAAAATGTTAGTCTTCCTTTAAGTCATAGAACTTATTTAAACATAAACCAATTTCTATTACA GGTTATGCTATTAAATAGCTGTAATTATTAAGTTATTATTTTTATAATTAGTTGTTAAATTTCATTTTACACCCACTCAAATTTAACAAA GAATCTTTAGCCCCTTTAAATTTTAGAATTAAATTAAATTTTTAAAGTTTTACTTCTAAAATGAGATTGTGACTGGCAATTGTTTATAGT GAAACTTTTTAAATTAATCTTTGTACTCCTCTATCAGTGCTTGCTACCAAGAGAATGTCCAAAATGATTTGTTTTACCATGGGAAAATTC TTACTATTCAACAAACTCTCAGTTGGCCCCCTACAGCAGTCTGGTGTTGAAGTTTCTTTGAACGAACTAAATATACTCATTTTATGTAAA GGTATCCAATTTGATTTTGAAACCAAAATAGAAAATGCAAAATTCTAAATTCCATGAAACATGGAATTTATGACACCAAAATCAATGGAG AGTAAGCAGCAGCAAACTGAGAATTATCCAGCATATGAATATAACAATGTGTTTTTAAGTAATCAATTCATTTAAAAAATTGAATATTAA >In-frame_LEPROT_ENST00000371065_chr1_65886423_+_SGIP1_ENST00000371035_chr1_67184977_+_1115nt GTTCTGCACCGGCGGGGGCGGGGCTCTGCGTGGCCGGGGCGGGCTCGGGATCCGCGGGGCGACTCCCGGTCTGGCTTGGGCAGGCTGCCC GGGCCGTGGCAGGAAGCCGGAAGCAGCCGCGGCCCCAGTTCGGGAGACATGGCGGGCGTTAAAGGTTCTTCCAGGGGACCCAGCCCCCTA ACCATGGGAGCTCAGGACACTCTCCCTGTTGCAGCAGCATTTACAGAAACAGTCAATGCCTATTTCAAAGGAGCAGACCCAAGCAAATGT ATCGTTAAGATTACCGGAGAAATGGTGTTGTCATTTCCTGCTGGCATCACCAGACACTTTGCCAACAACCCGTCCCCAGCTGCTCTGACT TTTCGGGTGATAAATTTCAGCAGGTTAGAACACGTCCTGCCAAACCCCCAACTTCTCTGCTGTGATAATACACAAAATGATGCCAATACC AAGGAATTCTGGGTAAACATGCCAAATTTGATGACTCACCTAAAGAAAGTGTCTGAACAAAAACCCCAGGCTACATATTATAACGTTGAC ATGCTCAAATATCAGGTGTCTGCCCAGGGCATTCAGTCCACACCTCTGAACCTGGCAGTGAATTGGCGATGTGAGCCTTCAAGCACTGAC CTGCGCATAGATTACAAATATAATACAGATGCAATGACGACTGCTGTGGCCCTCAACAATGTGCAGTTCCTGGTCCCCATCGACGGAGGA GTCACCAAGCTCCAGGCAGTGCTCCCACCAGCAGTCTGGAATGCTGAACAACAGAGAATATTGTGGAAGATTCCTGATATCTCTCAGAAG TCAGAAAATGGAGGGGTGGGTTCTTTGTTGGCAAGATTTCAGTTATCTGAAGGCCCAAGCAAACCTTCTCCATTGGTTGTGCAGTTCACA AGTGAAGGAAGCACCCTTTCTGGCTGTGACATTGAACTTGTTGGAGCAGGGTATCGATTTTCACTCATCAAGAAAAGGTTTGCTGCAGGA AAATACTTGGCAGATAACTAATGAAATCTTATGCAAGGATTTGGAGGATTCATATAATGGAGAACTGATGTATGAGAAACAGATTTTAAT |
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FusionGenePPI for LEPROT_SGIP1 |
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Hgene | Hgene's interactors | Tgene | Tgene's interactors |
LEPROT | ELAVL1 | SGIP1 | ITSN1, REPS1, AMPH, APP, EPS15 |
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Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Still interaction with |
Tgene | SGIP1 | chr1:65886423 | chr1:67184977 | ENST00000237247 | + | 19 | 27 | 667_670 | 574 | 860 | DPF motifs-containing proteins |
Tgene | SGIP1 | chr1:65886423 | chr1:67184977 | ENST00000237247 | + | 19 | 27 | 813_818 | 574 | 860 | DPF motifs-containing proteins |
Tgene | SGIP1 | chr1:65886423 | chr1:67184977 | ENST00000371037 | + | 17 | 25 | 667_670 | 543 | 829 | DPF motifs-containing proteins |
Tgene | SGIP1 | chr1:65886423 | chr1:67184977 | ENST00000371037 | + | 17 | 25 | 813_818 | 543 | 829 | DPF motifs-containing proteins |
Tgene | SGIP1 | chr1:65886423 | chr1:67184977 | ENST00000371039 | + | 14 | 22 | 667_670 | 346 | 632 | DPF motifs-containing proteins |
Tgene | SGIP1 | chr1:65886423 | chr1:67184977 | ENST00000371039 | + | 14 | 22 | 813_818 | 346 | 632 | DPF motifs-containing proteins |
Tgene | SGIP1 | chr1:65886423 | chr1:67184977 | ENST00000237247 | + | 19 | 27 | 593_595 | 574 | 860 | DPF motifs-containing proteins |
Tgene | SGIP1 | chr1:65886423 | chr1:67184977 | ENST00000371037 | + | 17 | 25 | 561_567 | 543 | 829 | DPF motifs-containing proteins |
Tgene | SGIP1 | chr1:65886423 | chr1:67184977 | ENST00000371037 | + | 17 | 25 | 593_595 | 543 | 829 | DPF motifs-containing proteins |
Tgene | SGIP1 | chr1:65886423 | chr1:67184977 | ENST00000371039 | + | 14 | 22 | 561_567 | 346 | 632 | DPF motifs-containing proteins |
Tgene | SGIP1 | chr1:65886423 | chr1:67184977 | ENST00000371039 | + | 14 | 22 | 593_595 | 346 | 632 | DPF motifs-containing proteins |
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Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Interaction lost with |
Tgene | SGIP1 | chr1:65886423 | chr1:67184977 | ENST00000237247 | + | 19 | 27 | 561_567 | 574 | 860 | DPF motifs-containing proteins |
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Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Interaction lost with |
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RelatedDrugs for LEPROT_SGIP1 |
![]() (DrugBank Version 5.1.0 2018-04-02) |
Partner | Gene | UniProtAcc | DrugBank ID | Drug name | Drug activity | Drug type | Drug status |
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RelatedDiseases for LEPROT_SGIP1 |
![]() (DisGeNet 4.0) |
Partner | Gene | Disease ID | Disease name | # pubmeds | Source |
Tgene | SGIP1 | C0001973 | Alcoholic Intoxication, Chronic | 2 | PSYGENET |