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Fusion gene ID: 18688 |
FusionGeneSummary for KIAA1328_QSER1 |
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Fusion gene information | Fusion gene name: KIAA1328_QSER1 | Fusion gene ID: 18688 | Hgene | Tgene | Gene symbol | KIAA1328 | QSER1 | Gene ID | 57536 | 79832 |
Gene name | KIAA1328 | glutamine and serine rich 1 | |
Synonyms | - | - | |
Cytomap | 18q12.2 | 11p13 | |
Type of gene | protein-coding | protein-coding | |
Description | protein hinderinhinderin | glutamine and serine-rich protein 1 | |
Modification date | 20180519 | 20180519 | |
UniProtAcc | Q86T90 | Q2KHR3 | |
Ensembl transtripts involved in fusion gene | ENST00000543923, ENST00000435985, ENST00000280020, ENST00000591619, ENST00000586135, ENST00000592521, ENST00000586501, ENST00000601437, | ENST00000399302, ENST00000527250, ENST00000527788, | |
Fusion gene scores | * DoF score | 3 X 3 X 3=27 | 4 X 5 X 3=60 |
# samples | 3 | 5 | |
** MAII score | log2(3/27*10)=0.15200309344505 effective Gene in Pan-Cancer Fusion Genes (eGinPCFGs). DoF>8 and MAII>0 | log2(5/60*10)=-0.263034405833794 possibly effective Gene in Pan-Cancer Fusion Genes (peGinPCFGs). DoF>8 and MAII<0 | |
Context | PubMed: KIAA1328 [Title/Abstract] AND QSER1 [Title/Abstract] AND fusion [Title/Abstract] | ||
Functional or gene categories assigned by FusionGDB annotation |
* DoF score (Degree of Frequency) = # partners X # break points X # cancer types ** MAII score (Major Active Isofusion Index) = log2(# samples/DoF score*10) |
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Partner | Gene | GO ID | GO term | PubMed ID |
![]() (ChiTars (NAR, 2018), tumorfusions (NAR, 2018), Gao et al. (Cell, 2018)) * All genome coordinats were lifted-over on hg19. * Click on the break point to see the gene structure around the break point region using the UCSC Genome Browser. |
Data type | Source | Cancer type | Sample | Hgene | Hchr | Hbp | Hstrand | Tgene | Tchr | Tbp | Tstrand |
TCGA | LD | LUAD | TCGA-44-3917-01A | KIAA1328 | chr18 | 34505005 | + | QSER1 | chr11 | 32948703 | + |
* LD: Li Ding group's fusion gene list RV: Roel Verhaak group's fusion gene list ChiTaRs fusion database |
![]() * Click on the break point to see the gene structure around the break point region using the UCSC Genome Browser. |
ORF | Henst | Tenst | Hgene | Hchr | Hbp | Hstrand | Tgene | Tchr | Tbp | Tstrand |
intron-5UTR | ENST00000543923 | ENST00000399302 | KIAA1328 | chr18 | 34505005 | + | QSER1 | chr11 | 32948703 | + |
intron-3UTR | ENST00000543923 | ENST00000527250 | KIAA1328 | chr18 | 34505005 | + | QSER1 | chr11 | 32948703 | + |
intron-5UTR | ENST00000543923 | ENST00000527788 | KIAA1328 | chr18 | 34505005 | + | QSER1 | chr11 | 32948703 | + |
intron-5UTR | ENST00000435985 | ENST00000399302 | KIAA1328 | chr18 | 34505005 | + | QSER1 | chr11 | 32948703 | + |
intron-3UTR | ENST00000435985 | ENST00000527250 | KIAA1328 | chr18 | 34505005 | + | QSER1 | chr11 | 32948703 | + |
intron-5UTR | ENST00000435985 | ENST00000527788 | KIAA1328 | chr18 | 34505005 | + | QSER1 | chr11 | 32948703 | + |
intron-5UTR | ENST00000280020 | ENST00000399302 | KIAA1328 | chr18 | 34505005 | + | QSER1 | chr11 | 32948703 | + |
intron-3UTR | ENST00000280020 | ENST00000527250 | KIAA1328 | chr18 | 34505005 | + | QSER1 | chr11 | 32948703 | + |
intron-5UTR | ENST00000280020 | ENST00000527788 | KIAA1328 | chr18 | 34505005 | + | QSER1 | chr11 | 32948703 | + |
intron-5UTR | ENST00000591619 | ENST00000399302 | KIAA1328 | chr18 | 34505005 | + | QSER1 | chr11 | 32948703 | + |
intron-3UTR | ENST00000591619 | ENST00000527250 | KIAA1328 | chr18 | 34505005 | + | QSER1 | chr11 | 32948703 | + |
intron-5UTR | ENST00000591619 | ENST00000527788 | KIAA1328 | chr18 | 34505005 | + | QSER1 | chr11 | 32948703 | + |
5UTR-5UTR | ENST00000586135 | ENST00000399302 | KIAA1328 | chr18 | 34505005 | + | QSER1 | chr11 | 32948703 | + |
5UTR-3UTR | ENST00000586135 | ENST00000527250 | KIAA1328 | chr18 | 34505005 | + | QSER1 | chr11 | 32948703 | + |
5UTR-5UTR | ENST00000586135 | ENST00000527788 | KIAA1328 | chr18 | 34505005 | + | QSER1 | chr11 | 32948703 | + |
intron-5UTR | ENST00000592521 | ENST00000399302 | KIAA1328 | chr18 | 34505005 | + | QSER1 | chr11 | 32948703 | + |
intron-3UTR | ENST00000592521 | ENST00000527250 | KIAA1328 | chr18 | 34505005 | + | QSER1 | chr11 | 32948703 | + |
intron-5UTR | ENST00000592521 | ENST00000527788 | KIAA1328 | chr18 | 34505005 | + | QSER1 | chr11 | 32948703 | + |
intron-5UTR | ENST00000586501 | ENST00000399302 | KIAA1328 | chr18 | 34505005 | + | QSER1 | chr11 | 32948703 | + |
intron-3UTR | ENST00000586501 | ENST00000527250 | KIAA1328 | chr18 | 34505005 | + | QSER1 | chr11 | 32948703 | + |
intron-5UTR | ENST00000586501 | ENST00000527788 | KIAA1328 | chr18 | 34505005 | + | QSER1 | chr11 | 32948703 | + |
intron-5UTR | ENST00000601437 | ENST00000399302 | KIAA1328 | chr18 | 34505005 | + | QSER1 | chr11 | 32948703 | + |
intron-3UTR | ENST00000601437 | ENST00000527250 | KIAA1328 | chr18 | 34505005 | + | QSER1 | chr11 | 32948703 | + |
intron-5UTR | ENST00000601437 | ENST00000527788 | KIAA1328 | chr18 | 34505005 | + | QSER1 | chr11 | 32948703 | + |
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FusionProtFeatures for KIAA1328_QSER1 |
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Hgene | Tgene |
KIAA1328 | QSER1 |
Competes with SMC1 for binding to SMC3. May affect theavailability of SMC3 to engage in the formation of multimericprotein complexes. {ECO:0000269|PubMed:15656913}. |
![]() * Minus value of BPloci means that the break pointn is located before the CDS. |
- In-frame and retained protein feature among the 13 regional features. |
Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Protein feature | Protein feature note |
- In-frame and not-retained protein feature among the 13 regional features. |
Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Protein feature | Protein feature note |
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FusionGeneSequence for KIAA1328_QSER1 |
![]() (nt: nucleotides, aa: amino acids) |
* Fusion amino acid sequences. |
* Fusion transcript sequences (only coding sequence (CDS) region). |
* Fusion transcript sequences (Full-length transcript). |
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FusionGenePPI for KIAA1328_QSER1 |
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Hgene | Hgene's interactors | Tgene | Tgene's interactors |
KIAA1328 | APC, PCM1, OFD1, CEP135, FGFR1OP, CCDC14, CDC14A | QSER1 | SOX2, MAGEA10, FHL3, FAM170A, HNRNPH2, PDLIM7, FBXO31, FOXJ2, FOXP1, C11orf30, PHF12, GATAD1, COMMD8, HSPBP1, PLEC, AAK1, SEC24B, CCDC88A, EYA4, UBE2D2, BRD1 |
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Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Still interaction with |
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Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Interaction lost with |
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Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Interaction lost with |
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RelatedDrugs for KIAA1328_QSER1 |
![]() (DrugBank Version 5.1.0 2018-04-02) |
Partner | Gene | UniProtAcc | DrugBank ID | Drug name | Drug activity | Drug type | Drug status |
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RelatedDiseases for KIAA1328_QSER1 |
![]() (DisGeNet 4.0) |
Partner | Gene | Disease ID | Disease name | # pubmeds | Source |